View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0412_high_213 (Length: 202)
Name: NF0412_high_213
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0412_high_213 |
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Alignment Details
Target: chr7 (Bit Score: 117; Significance: 8e-60; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 6546 - 6683
Alignment:
| Q |
1 |
aaaaagacatatcttttcttaaagattggttacattgatggtccttttgaggaagtttctttgtaactacaaaagtttggatggnnnnnnngagaaattt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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|
| T |
6546 |
aaaaagacatatcttttcttaaagattggttacattgatggtccttttgaggaagtttctttgtaactacaaaagtttggatggaaaaaaagagaaattt |
6645 |
T |
|
| Q |
101 |
tgttttgtaattccagaatccctgaaagctactttcat |
138 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
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| T |
6646 |
tgttttgtaattccagaatccctgaaagctactttcat |
6683 |
T |
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