View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0412_high_66 (Length: 345)

Name: NF0412_high_66
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0412_high_66
NF0412_high_66
[»] chr6 (64 HSPs)
chr6 (29-334)||(27604577-27604882)
chr6 (29-334)||(27718251-27718556)
chr6 (29-334)||(27610874-27611179)
chr6 (29-331)||(27592892-27593194)
chr6 (29-334)||(27678956-27679261)
chr6 (29-334)||(27698366-27698671)
chr6 (29-332)||(27677486-27677789)
chr6 (29-332)||(27706274-27706577)
chr6 (29-334)||(26802452-26802757)
chr6 (108-334)||(27724796-27725022)
chr6 (29-334)||(28781149-28781454)
chr6 (29-334)||(28786288-28786593)
chr6 (29-334)||(28792409-28792714)
chr6 (29-329)||(26884178-26884480)
chr6 (29-302)||(27427478-27427751)
chr6 (154-334)||(26646489-26646669)
chr6 (154-334)||(26752457-26752637)
chr6 (29-334)||(27531069-27531374)
chr6 (29-305)||(26861655-26861928)
chr6 (108-332)||(31284300-31284524)
chr6 (154-334)||(25579729-25579909)
chr6 (154-334)||(26655999-26656179)
chr6 (154-334)||(26761970-26762150)
chr6 (130-334)||(25481752-25481956)
chr6 (198-334)||(26142875-26143011)
chr6 (120-332)||(28226962-28227174)
chr6 (108-328)||(28242820-28243040)
chr6 (120-328)||(26341894-26342105)
chr6 (154-334)||(25538550-25538730)
chr6 (154-305)||(28139580-28139731)
chr6 (140-334)||(26048855-26049049)
chr6 (140-334)||(26070024-26070218)
chr6 (163-305)||(26823879-26824021)
chr6 (154-334)||(26055936-26056116)
chr6 (154-334)||(26075906-26076086)
chr6 (154-290)||(26623030-26623166)
chr6 (154-290)||(26729008-26729144)
chr6 (46-334)||(28234574-28234861)
chr6 (108-329)||(28325496-28325717)
chr6 (142-334)||(27338050-27338242)
chr6 (142-334)||(27398790-27398982)
chr6 (120-329)||(28181129-28181338)
chr6 (120-263)||(26848741-26848884)
chr6 (195-329)||(28149953-28150086)
chr6 (145-334)||(26937104-26937293)
chr6 (108-327)||(28098320-28098539)
chr6 (120-329)||(28185381-28185590)
chr6 (223-334)||(25506975-25507086)
chr6 (237-334)||(27229242-27229339)
chr6 (209-329)||(28297765-28297885)
chr6 (209-329)||(28514188-28514308)
chr6 (209-260)||(26635774-26635825)
chr6 (209-260)||(26741740-26741791)
chr6 (212-260)||(26959250-26959298)
chr6 (143-263)||(27214498-27214618)
chr6 (143-263)||(27234610-27234730)
chr6 (215-330)||(2184302-2184417)
chr6 (211-262)||(26975134-26975185)
chr6 (196-330)||(2184912-2185046)
chr6 (209-263)||(27665169-27665223)
chr6 (142-263)||(26811590-26811711)
chr6 (142-269)||(29826102-29826229)
chr6 (142-260)||(26949745-26949863)
chr6 (214-262)||(25071741-25071789)
[»] scaffold0349 (2 HSPs)
scaffold0349 (29-334)||(3292-3599)
scaffold0349 (29-334)||(14228-14532)
[»] scaffold0277 (2 HSPs)
scaffold0277 (29-334)||(4543-4848)
scaffold0277 (29-334)||(13504-13809)
[»] scaffold0419 (1 HSPs)
scaffold0419 (29-334)||(7535-7840)
[»] scaffold0003 (1 HSPs)
scaffold0003 (29-302)||(59612-59885)
[»] chr4 (8 HSPs)
chr4 (29-302)||(18073804-18074077)
chr4 (173-332)||(18699403-18699562)
chr4 (173-332)||(18679570-18679729)
chr4 (154-332)||(18655461-18655639)
chr4 (163-332)||(18731497-18731666)
chr4 (163-332)||(18724078-18724247)
chr4 (108-316)||(5090905-5091113)
chr4 (133-302)||(17989019-17989185)
[»] chr1 (3 HSPs)
chr1 (130-328)||(28127639-28127837)
chr1 (130-310)||(28164323-28164502)
chr1 (154-332)||(268341-268519)
[»] chr8 (1 HSPs)
chr8 (154-287)||(29273767-29273900)
[»] scaffold0038 (4 HSPs)
scaffold0038 (120-332)||(27460-27672)
scaffold0038 (108-328)||(42982-43202)
scaffold0038 (46-334)||(34735-35023)
scaffold0038 (108-329)||(116811-117032)
[»] chr2 (2 HSPs)
chr2 (209-332)||(3279700-3279823)
chr2 (209-262)||(17993736-17993789)
[»] scaffold1254 (1 HSPs)
scaffold1254 (250-334)||(10-94)
[»] scaffold0019 (1 HSPs)
scaffold0019 (120-329)||(58245-58454)
[»] chr5 (1 HSPs)
chr5 (142-328)||(16689027-16689213)
[»] scaffold0012 (1 HSPs)
scaffold0012 (290-334)||(214467-214511)


Alignment Details
Target: chr6 (Bit Score: 265; Significance: 1e-148; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 29 - 334
Target Start/End: Original strand, 27604577 - 27604882
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||    
T  27604577 agttagcagcctggctcagagccactttccatcgctgcaacctctttatgttatcctcatcattttgaaacctttttttatgctcagccaatgcttgacc 27604676  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27604677 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaacgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 27604776  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27604777 agttcatccaaacaaaaggaagaagaggcatatttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 27604876  T
Q  329 catctc 334  Q
    ||||||    
T  27604877 catctc 27604882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 29 - 334
Target Start/End: Original strand, 27718251 - 27718556
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  ||||||| || ||||||||||||||       ||||||||||||||||| |||    
T  27718251 agttagcagcctggctcagagccactttccatcgctgcaacctctccatgttattcttatcattttgaaacctcttttcatgctcagccaatgcttcacc 27718350  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     ||||||||||| ||||||||||| | || ||||||||| || |||||||||||||||| || ||||||||||||| ||||||| ||||| ||||| |||    
T  27718351 ataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagtgaattatgtggaca 27718450  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||    
T  27718451 agttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgattt 27718550  T
Q  329 catctc 334  Q
    ||||||    
T  27718551 catctc 27718556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 29 - 334
Target Start/End: Original strand, 27610874 - 27611179
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||| |||||||||||||||||||||||||||  |||||||||||  ||||||| || ||||||||||||||       ||||||||||||||||| |||    
T  27610874 agtttgcagcctggctcagagccactttccatccctgcaacctctccatgttattcttatcattttgaaacctcttttcatgctcagccaatgcttcacc 27610973  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     ||||||||||| ||||||||||| | || ||||||||| || |||||||||||||||| || ||||||||||||| ||||||| ||||| ||||| |||    
T  27610974 ataactacctttctgatgtcgcactttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagtgaattatgtggaca 27611073  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||    
T  27611074 agttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgattt 27611173  T
Q  329 catctc 334  Q
    ||||||    
T  27611174 catctc 27611179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 29 - 331
Target Start/End: Original strand, 27592892 - 27593194
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    ||||||||||||||||||||||  ||||||||  |||||||||||  ||||| | |  ||||||||||||||       ||||||||||||||||| |||    
T  27592892 agttagcagcctggctcagagcgtctttccatccctgcaacctctccatgtttttcggatcattttgaaacctcttttcatgctcagccaatgcttcacc 27592991  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    ||||||||||||| |||||||||||||||||||  ||    
T  27592992 ataactacctttatgatgtcgcacatgagaaggatccacaccaaagaaaacaggcaaaacagggcgaccctttgtcttgtagcaatgaatgatgtggtca 27593091  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| |||||||||||    
T  27593092 agttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgattt 27593191  T
Q  329 cat 331  Q
    |||    
T  27593192 cat 27593194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 29 - 334
Target Start/End: Complemental strand, 27679261 - 27678956
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||||||||||||||||||||||  |||||||   ||||||||||  ||||| | |  ||||||||||||||       ||||||||||||||||| |||    
T  27679261 agttagcagcctggctcagagcctttttccatccttgcaacctctccatgtttttcggatcattttgaaacctcttttcatgctcagccaatgcttcacc 27679162  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     |||||||||||| |||||||||||  || |||||||||||||||||||||||||| || || ||||||||||||| ||||||| ||||||||||| |||    
T  27679161 ataactacctttacgatgtcgcacaacagtaggttccacaccaaagaaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaatgatgtggaca 27679062  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| |||||||||||    
T  27679061 agttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgattt 27678962  T
Q  329 catctc 334  Q
    ||||||    
T  27678961 catctc 27678956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 29 - 334
Target Start/End: Original strand, 27698366 - 27698671
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||  ||||| | |  ||||||||||||||       |||||||||||||||||| ||    
T  27698366 agttagcagcctggctcagagcctctttccatccctgcaacctctccatgtttttcggatcattttgaaacctcttttcatgctcagccaatgctttgcc 27698465  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     ||||||||||||||||||| ||||| ||  ||||||||||| |||||||||||||||| || |||||||||||||  |||||| ||||| ||||| |||    
T  27698466 ataactacctttatgatgtctcacattagttggttccacaccgaagaaaacaggcaaaacgaggcgaccctttgtctcgtagcagtgaattatgtggaca 27698565  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||    
T  27698566 agttcgtccaaacaaaatgaagaagatgcatagttgagagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgattt 27698665  T
Q  329 catctc 334  Q
    ||||||    
T  27698666 catctc 27698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 29 - 332
Target Start/End: Original strand, 27677486 - 27677789
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||  ||| | | |  ||||||||||||||       ||||||||||||||||| |||    
T  27677486 agttagcagcctggctcagagcctctttccatccctgcaacctctccatgcttttcggatcattttgaaacctcttttcatgctcagccaatgcttcacc 27677585  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     ||||||||||| ||||||||||||  || |||||||||| ||||||||||||||| || || ||||||||||||| ||||||| ||||||||||| |||    
T  27677586 ataactacctttctgatgtcgcacaatagtaggttccacagcaaagaaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaatgatgtggaca 27677685  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || || ||||||||||||||||||| |||||||||||    
T  27677686 agttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacagcaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgattt 27677785  T
Q  329 catc 332  Q
    ||||    
T  27677786 catc 27677789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 29 - 332
Target Start/End: Original strand, 27706274 - 27706577
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||  ||||| | |  ||||||||||||||       ||||||||||||||||| |||    
T  27706274 agttagcagcctggctcagagcctctttccatccctgcaacctctccatgtttttcggatcattttgaaacctcttttcatgctcagccaatgcttcacc 27706373  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     |||||||||||| |||||||||||  || |||||| |||||||| |||||||||| || || ||||||||||||| ||||||| ||||||||||| |||    
T  27706374 ataactacctttacgatgtcgcacaatagtaggttctacaccaaataaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaatgatgtggaca 27706473  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| || || ||||||||||||||||||| |||||||||||    
T  27706474 agttcgtccaaacaaaatgaagaagaggcataggtgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgattt 27706573  T
Q  329 catc 332  Q
    ||||    
T  27706574 catc 27706577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 29 - 334
Target Start/End: Complemental strand, 26802757 - 26802452
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||| ||||||||||||||       ||||||||||||||||| |||    
T  26802757 agttagcagcctggctcagagccactttccatcgctccaacctctccatgttatccttatcattttgaaaccttttttcatgctcagccaatgcttcacc 26802658  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     || |||| | ||||||| ||||||| || ||| |||||||||||||||| |||||| | || ||||||||||||| | ||||||||||| |||||||||    
T  26802657 atagctacatgtatgatggcgcacattagtaggatccacaccaaagaaaataggcaagacgaggcgaccctttgtcttatagcaatgaataatgtgaaca 26802558  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| ||||| |||||    |||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||  |||| |||||||||||    
T  26802557 agttcgtccaagcaaaattttgaagaggcatagttgatagaaaacacaggaataaaaattctagattcttcaatggccttgatgagtgatggtgtgattt 26802458  T
Q  329 catctc 334  Q
    ||||||    
T  26802457 catctc 26802452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 108 - 334
Target Start/End: Original strand, 27724796 - 27725022
Alignment:
Q  108 atgctcagccaatgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtg 207  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||| | || ||||||||| || |||||||||||||||| || ||||||||||||| ||    
T  27724796 atgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttg 27724895  T
Q  208 tagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggcct 307  Q
    ||||| ||||| ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27724896 tagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaataggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggcct 27724995  T
Q  308 tgagaagtgctggtgtgatttcatctc 334  Q
    |||| |||| |||||||||||||||||    
T  27724996 tgaggagtgatggtgtgatttcatctc 27725022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 29 - 334
Target Start/End: Complemental strand, 28781454 - 28781149
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||||||||| ||| |||||||||  |||||||| ||||||||||  |||||||||| ||||||||||||||       |||  |||||||||||| |||    
T  28781454 agttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttttcatgtccagccaatgcttcacc 28781355  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     |||  |||| ||||||||||||||| || ||| ||||||||||||||||||||||||| || |||||| |||||| ||||||||||||| |||||||||    
T  28781354 ataaggacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaatgaataatgtgaaca 28781255  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| ||||| |||||    |||| |||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||| |||||||||||    
T  28781254 agttcgtccaagcaaaattttgaagtggcatagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgattt 28781155  T
Q  329 catctc 334  Q
    ||||||    
T  28781154 catctc 28781149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 29 - 334
Target Start/End: Complemental strand, 28786593 - 28786288
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||||||||| ||| |||||||||  |||||||| ||||||||||  |||||||||| ||||||||||||||       |||| |||||||||||| |||    
T  28786593 agttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttttcatgcccagccaatgcttcacc 28786494  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     |||| |||| ||||||||||||||| || ||| || |||||||||||||||||||||| || |||||| |||||| ||||||||||||| |||||||||    
T  28786493 ataacgacctgtatgatgtcgcacattagtaggatcgacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaatgaataatgtgaaca 28786394  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| ||||| |||||    || | ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||| |||||||||||    
T  28786393 agttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgattt 28786294  T
Q  329 catctc 334  Q
    ||||||    
T  28786293 catctc 28786288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 29 - 334
Target Start/End: Complemental strand, 28792714 - 28792409
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||||||||| ||| |||||||||  |||||||| ||||||||||  |||||||||| ||||||||||||||       |||| |||||||||||| |||    
T  28792714 agttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttttcatgcccagccaatgcttcacc 28792615  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     |||| |||| ||||||||||||||| || ||| || |||||||||||||||||||||| || |||||| |||||| ||||||||||||| |||||||||    
T  28792614 ataacgacctgtatgatgtcgcacattagtaggatcgacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaatgaataatgtgaaca 28792515  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| ||||| |||||    || | ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||| |||||||||||    
T  28792514 agttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgattt 28792415  T
Q  329 catctc 334  Q
    ||||||    
T  28792414 catctc 28792409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 29 - 329
Target Start/End: Complemental strand, 26884480 - 26884178
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||||||| | || |||| ||||| ||||||| ||||||||||||  |||||||||| ||||||||||||||       ||| ||||||||||||| |||    
T  26884480 agttagcaacttgcctcatagccattttccatcgctgcaacctctccatgttatccttatcattttgaaaccttttttcatggtcagccaatgcttcacc 26884381  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatg--atgtgaa 226  Q
     ||||||||| ||||||||||||||| || ||| ||||||||||  ||||||||||||| || |||||||||||||  |||||| ||||||  ||||| |    
T  26884380 ataactacctgtatgatgtcgcacatcagtaggatccacaccaacaaaaacaggcaaaacgaggcgaccctttgtctcgtagcagtgaatgacatgtgga 26884281  T
Q  227 caagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgat 326  Q
    ||||||| ||||||||||| |||||||| ||||||||| ||||||| |  ||||||||||| || ||||| |||||||||||||  |||| |||||||||    
T  26884280 caagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatggtgtgat 26884181  T
Q  327 ttc 329  Q
    |||    
T  26884180 ttc 26884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 29 - 302
Target Start/End: Original strand, 27427478 - 27427751
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    ||||||||||| | |||||||||||||||||||||||||||||||  ||||| | |  ||||||||||||||       |||||||||||||||||||||    
T  27427478 agttagcagccagactcagagccactttccattgctgcaacctctccatgtttttcgtatcattttgaaacctattttcatgctcagccaatgctttacc 27427577  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     || |||||| ||||||||||||||| || ||||||||||||||||||||||||||||| || || |||||| ||  ||||||| ||||||||||| |||    
T  27427578 atacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtggaca 27427677  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaat 302  Q
    |||   ||||||||| | |||||||| |||||||||  |||||| |  ||||| |||||||||||||| |||||    
T  27427678 agtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 27427751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 154 - 334
Target Start/End: Complemental strand, 26646669 - 26646489
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| ||| ||||| ||| ||||||| ||||||| ||  |||||||||||| ||||||||||||||||||| |||||||| |||||||||||   |||||    
T  26646669 tgagtaggatccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatgaatgatgtggacaagttcgtccaaacaaaatttagaag 26646570  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  |||| |||||||||||||||||    
T  26646569 aggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgagtgatggtgtgatttcatctc 26646489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 154 - 334
Target Start/End: Complemental strand, 26752637 - 26752457
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| ||| ||||| ||| ||||||| ||||||| ||  |||||||||||| ||||||||||||||||||| |||||||| |||||||||||   |||||    
T  26752637 tgagtaggatccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatgaatgatgtggacaagttcgtccaaacaaaatttagaag 26752538  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  |||| |||||||||||||||||    
T  26752537 aggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgagtgatggtgtgatttcatctc 26752457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 334
Target Start/End: Original strand, 27531069 - 27531374
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    ||||||| || |||||||||||  |||||||||||||||||||||   ||||||||| |||||||||||||        |||| |||| ||||||| |||    
T  27531069 agttagccgcttggctcagagcttctttccattgctgcaacctctcagtgttatccttatcattttgaaacttttttttatgcacagctaatgcttcacc 27531168  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     || |||||| | ||||||||||||| || ||| ||||||||||  |||||||||||||  |  | |||||||||   |||||||||| |||||||||||    
T  27531169 atatctacctgtgtgatgtcgcacatcagtaggatccacaccaataaaaacaggcaaaacaagacaaccctttgtatcgtagcaatgagtgatgtgaaca 27531268  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| ||||||||||| |||||||| ||||||||   |||||| || |||||||||||||| ||||  |||||||| ||    |||| |||||||||||    
T  27531269 agttcgtccaaacaaaatgaagaagatgcatagttttcagaaaatacgggaataaaaatcctagatttttcaatggcattttttagtgatggtgtgattt 27531368  T
Q  329 catctc 334  Q
    ||||||    
T  27531369 catctc 27531374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 29 - 305
Target Start/End: Complemental strand, 26861928 - 26861655
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||||||||| ||| ||||||| |||||||||  |||||||||||  |||||||||  ||||||||||||||       ||||| ||||||||||| |||    
T  26861928 agttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaatgcttcacc 26861829  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     ||| ||||| ||||||||||||||| || ||| ||||  ||| ||||||||||||||| |||||||||||||  |   | ||| | |||||| || |||    
T  26861828 ataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcc---ttgcagttaatgatttggaca 26861732  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggc 305  Q
    ||||||||||||||||| || |||||||||||||||  ||||||||||||||| ||||| || || || ||||||||    
T  26861731 agttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 26861655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 108 - 332
Target Start/End: Complemental strand, 31284524 - 31284300
Alignment:
Q  108 atgctcagccaatgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtg 207  Q
    ||||| |||||||||||  || ||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||||| || |||||| |||  | |     
T  31284524 atgcttagccaatgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgctta 31284425  T
Q  208 tagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggcct 307  Q
    ||  | ||||||||||| |||||||| |||||||||||||| |||||||||||||||  ||||||||| || ||||||||||| || || |||||||| |    
T  31284424 tacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcat 31284325  T
Q  308 tgagaagtgctggtgtgatttcatc 332  Q
    ||   |||| |||||||||||||||    
T  31284324 tgtcgagtgatggtgtgatttcatc 31284300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 154 - 334
Target Start/End: Complemental strand, 25579909 - 25579729
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| |||||||||| || ||||||| ||||| |  | || || ||||||| ||||||| ||||||||||| |||||||| ||||||||||| |||||||    
T  25579909 tgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaag 25579810  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    | |||||||||  |||||| |  |||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||    
T  25579809 atgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttgacaagtgatggtgtgatttcatctc 25579729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 154 - 334
Target Start/End: Complemental strand, 26656179 - 26655999
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| ||| ||||||||| |||||||||||||||     | |||||||||| | ||||||||||||||||| |||||||| ||||||||||| |||||||    
T  26656179 tgagtaggatccacaccatagaaaacaggcaaaaccgaacaaccctttgtcttatagcaatgaatgatgtggacaagttcgtccaaacaaaatgaagaag 26656080  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    | |||||||||  |||||| |  |||||||||||||||||||| ||||||||||| |  |||| |||||||||||||||||    
T  26656079 atgcatagttggcagaaaatatgggaataaaaatcctggattcttcaatggccttaacgagtgatggtgtgatttcatctc 26655999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 154 - 334
Target Start/End: Complemental strand, 26762150 - 26761970
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| ||| ||||||||| |||||||||||||||     | |||||||||| | ||||||||||||||||| |||||||| ||||||||||| |||||||    
T  26762150 tgagtaggatccacaccatagaaaacaggcaaaaccgaacaaccctttgtcttatagcaatgaatgatgtggacaagttcgtccaaacaaaatgaagaag 26762051  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    | |||||||||  |||||| |  |||||||||||||||||||| ||||||||||| |  |||| |||||||||||||||||    
T  26762050 atgcatagttggcagaaaatatgggaataaaaatcctggattcttcaatggccttaacgagtgatggtgtgatttcatctc 26761970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 334
Target Start/End: Complemental strand, 25481956 - 25481752
Alignment:
Q  130 taactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaa 229  Q
    ||||||| | ||||| |||| |||| || ||| ||||||||| ||||||| || || |  | || || ||||||| ||||||| ||||||||||| ||||    
T  25481956 taactacatgtatgacgtcgaacatcagtaggatccacaccatagaaaacgggtaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaa 25481857  T
Q  230 gttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttc 329  Q
    |||| ||||||||||| |||||||| |||||||||  |||||| |  |||||| ||||||| ||||| ||||||||||||| ||||| ||||||||||||    
T  25481856 gttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaatacaaatcctagattcttcaatggccttgacaagtgatggtgtgatttc 25481757  T
Q  330 atctc 334  Q
    |||||    
T  25481756 atctc 25481752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 198 - 334
Target Start/End: Complemental strand, 26143011 - 26142875
Alignment:
Q  198 ctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattca 297  Q
    ||||||| ||||||| ||||||||||| |||||||| ||||||||||| |||||||| |||||||||  |||||| |  |||||||||||||| |||||     
T  26143011 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattct 26142912  T
Q  298 tcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  26142911 tcaatggccttgacaagtgatggtgtgatttcatctc 26142875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 120 - 332
Target Start/End: Complemental strand, 28227174 - 28226962
Alignment:
Q  120 tgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatg 219  Q
    ||||||||| ||||| || || ||||||||||||||||||||||||||| || ||||||  |||||||  | ||| |  |||  | || |||||||||||    
T  28227174 tgctttaccataactgcccttgtgatgtcgcacatgagaaggttccacatcatagaaaattggcaaaacaaggcgccgattttccttgaagcaatgaatg 28227075  T
Q  220 atgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctg 319  Q
    ||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || |||||||| |||||||| ||||| |||||| |||||| ||||| ||    
T  28227074 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaagtgatg 28226975  T
Q  320 gtgtgatttcatc 332  Q
     ||| ||||||||    
T  28226974 atgttatttcatc 28226962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 108 - 328
Target Start/End: Complemental strand, 28243040 - 28242820
Alignment:
Q  108 atgctcagccaatgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtg 207  Q
    ||||||||||| ||||||||| ||||| ||  | ||||||| ||| | ||||||||||||| || ||||||  |||||||  | ||| || ||| || ||    
T  28243040 atgctcagccagtgctttaccataactgccaatctgatgtctcacgttagaaggttccacatcatagaaaattggcaaaactaggcgtccatttttcttg 28242941  T
Q  208 tagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggcct 307  Q
     |||| ||||||||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || |||||||| |||||||| || || ||||||||||    
T  28242940 cagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggcct 28242841  T
Q  308 tgagaagtgctggtgtgattt 328  Q
    ||| ||||| |||||| ||||    
T  28242840 tgaaaagtgatggtgttattt 28242820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 120 - 328
Target Start/End: Original strand, 26341894 - 26342105
Alignment:
Q  120 tgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctt---tgtcgtgtagcaatga 216  Q
    ||||| ||||||||| ||  | ||| |||| ||||||||||||||||   || ||||||||||||||||   |||||||||   || | || ||||||||    
T  26341894 tgcttcaccgtaactcccaatctgacgtcgtacatgagaaggttccatgtcatagaaaacaggcaaaattttgcgacccttctttgccttgaagcaatga 26341993  T
Q  217 atgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtg 316  Q
    |||||||| |||||||| |||||||||||||||||||| ||||||||||| || || |  ||||| ||||||||||| || |||||||| |||| |||||    
T  26341994 atgatgtggacaagttcgtccaaacaaaacgaagaagaagcatagttgattgagaaaattggaatgaaaatcctggactcttcaatggctttgacaagtg 26342093  T
Q  317 ctggtgtgattt 328  Q
     | |||||||||    
T  26342094 attgtgtgattt 26342105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 154 - 334
Target Start/End: Complemental strand, 25538730 - 25538550
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| |||||||||| || ||||||| ||||| |  | || || ||||||| ||||||| |||||||| || |||||||| ||||||||||| |||||||    
T  25538730 tgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtcttgtagcagtgaatgatctggacaagttcgtccaaacaaaatgaagaag 25538631  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    | |||||||||  |||||| |  ||||||||||| || ||||| || |||||||||| ||||| |||||||||||||||||    
T  25538630 atgcatagttggcagaaaatatgggaataaaaattctagattcttcgatggccttgacaagtgatggtgtgatttcatctc 25538550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 305
Target Start/End: Complemental strand, 28139731 - 28139580
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||||||| ||||||||| |||||||||||||||  |  |  ||||||||  || |||| | ||||||||| |||||||| ||||| |||||||||||||    
T  28139731 tgagaaggatccacaccatagaaaacaggcaaaaccaaacatccctttgtgttgaagcagtcaatgatgtggacaagttcgtccaagcaaaacgaagaag 28139632  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggc 305  Q
    ||||||||||||| ||||||||||| || |||||||| ||||| ||||||||    
T  28139631 aggcatagttgatggaaaacacagggatgaaaatcctagattcttcaatggc 28139580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 140 - 334
Target Start/End: Complemental strand, 26049049 - 26048855
Alignment:
Q  140 tatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaa 239  Q
    |||||||||| |  |||| |||||||||| || | ||||| ||||| |  | || || ||||||| ||||||| ||||||||||| |||||||| |||||    
T  26049049 tatgatgtcgtatgtgagtaggttccacatcataaaaaacgggcaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaa 26048950  T
Q  240 acaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    |||||| |||||||| |||||||||  |||||| |  |||||||||||||| ||||| || |||||||||| ||||   ||||||||||||||||    
T  26048949 acaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggccttgacaagtttgggtgtgatttcatctc 26048855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 140 - 334
Target Start/End: Complemental strand, 26070218 - 26070024
Alignment:
Q  140 tatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaa 239  Q
    |||||||||| |  |||| |||||||||| || | ||||| ||||| |  | || || ||||||| ||||||| ||||||||||| |||||||| |||||    
T  26070218 tatgatgtcgtatgtgagtaggttccacatcataaaaaacgggcaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaa 26070119  T
Q  240 acaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    |||||| |||||||| |||||||||  |||||| |  |||||||||||||| ||||| || |||||||||| ||||   ||||||||||||||||    
T  26070118 acaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggccttgacaagtttgggtgtgatttcatctc 26070024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 163 - 305
Target Start/End: Complemental strand, 26824021 - 26823879
Alignment:
Q  163 tccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagt 262  Q
    ||||||||| ||||||||||||||| || ||| ||||||  | |||||    |||||||||| |||||||| ||||||||||| ||||||||||||||||    
T  26824021 tccacaccatagaaaacaggcaaaacgaggcgccccttttccttgtagacgcgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagt 26823922  T
Q  263 tgatagaaaacacaggaataaaaatcctggattcatcaatggc 305  Q
    ||  |||||||||||||||||||||||| || || ||||||||    
T  26823921 tggcagaaaacacaggaataaaaatcctagactcttcaatggc 26823879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 334
Target Start/End: Complemental strand, 26056116 - 26055936
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| |||||||||| || ||||||| ||||| |  | || || ||||||  ||||||| ||||||||||| |||||||| ||||||||||| |||||||    
T  26056116 tgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtgttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaag 26056017  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    | |||||||||  |||||| |  |||||||||||||  ||||| || |||||||||| ||||| || ||||||||||||||    
T  26056016 atgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttgacaagtgatgatgtgatttcatctc 26055936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 334
Target Start/End: Complemental strand, 26076086 - 26075906
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| |||||||||| || ||||||| ||||| |  | || || ||||||  ||||||| ||||||||||| |||||||| ||||||||||| |||||||    
T  26076086 tgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtgttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaag 26075987  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    | |||||||||  |||||| |  |||||||||||||  ||||| || |||||||||| ||||| || ||||||||||||||    
T  26075986 atgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttgacaagtgatgatgtgatttcatctc 26075906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 290
Target Start/End: Complemental strand, 26623166 - 26623030
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| ||| ||||| ||| |||| || ||||||| ||  |||||||||||  ||||||| ||||||||||| |||||||||||||||||||| ||||||     
T  26623166 tgagtaggatccacgccatagaagacgggcaaaacgagacgaccctttgttttgtagcagtgaatgatgtggacaagttcatccaaacaaaatgaagaat 26623067  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcct 290  Q
    | |||||||||  ||||||||||||||||||||||||    
T  26623066 atgcatagttgggagaaaacacaggaataaaaatcct 26623030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 290
Target Start/End: Complemental strand, 26729144 - 26729008
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| ||| ||||| ||| |||| || ||||||| ||  |||||||||||  ||||||| ||||||||||| |||||||||||||||||||| ||||||     
T  26729144 tgagtaggatccacgccatagaagacgggcaaaacgagacgaccctttgttttgtagcagtgaatgatgtggacaagttcatccaaacaaaatgaagaat 26729045  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcct 290  Q
    | |||||||||  ||||||||||||||||||||||||    
T  26729044 atgcatagttgggagaaaacacaggaataaaaatcct 26729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 46 - 334
Target Start/End: Complemental strand, 28234861 - 28234574
Alignment:
Q  46 agagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttaccgtaactacctttatgat 145  Q
    |||||||  ||||||| |||||||||||  ||||||||||  | |||||| |||        ||| ||| ||| ||||||||| ||||| || || ||||    
T  28234861 agagccatcttccatttctgcaacctctccatgttatccttgttattttggaacttctttatatgatcatccagtgctttaccataactgcccttgtgat 28234762  T
Q  146 gtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaa 245  Q
    ||||||| ||||||||||||||| || ||||||  |||||||  | ||| |  |||  |  | |||| | ||||||||| |||||||| ||||| |||||    
T  28234761 gtcgcacgtgagaaggttccacatcatagaaaattggcaaaactaggcgtctattttcctcgaagca-taaatgatgtggacaagttcgtccaagcaaaa 28234663  T
Q  246 cgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
     |||||||| ||||| |||||||| || |||||||| |||||||| || || ||||||||||||| ||||| |||||| ||||||||||    
T  28234662 tgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatggtgttatttcatctc 28234574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 329
Target Start/End: Complemental strand, 28325717 - 28325496
Alignment:
Q  108 atgctcagccaatgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtg 207  Q
    |||||| |||| ||||||||| ||||| || || ||||||||||| ||||||||||||||| |  ||||||| ||| |||  | ||| || |||    ||    
T  28325717 atgctcggccagtgctttaccataactgcccttgtgatgtcgcacgtgagaaggttccacatcgtagaaaactggctaaactaggcgcccattttctttg 28325618  T
Q  208 tagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggcct 307  Q
     |||| ||||| ||||| |||||||||||||| ||||| |||||||| ||||| |||||||| || | |||||| |||||||| || || ||||||||||    
T  28325617 aagcagtgaataatgtggacaagttcatccaagcaaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcctagactcttcaatggcct 28325518  T
Q  308 tgagaagtgctggtgtgatttc 329  Q
    ||| |||||  ||||| |||||    
T  28325517 tgaaaagtgacggtgttatttc 28325496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 142 - 334
Target Start/End: Original strand, 27338050 - 27338242
Alignment:
Q  142 tgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaac 241  Q
    |||||||| || |||| ||| ||| ||||| |||||||||||||||     | |||| ||||| ||||||| ||||||||||| |||||||| ||||| |    
T  27338050 tgatgtcgtacgtgagtaggatccgcaccatagaaaacaggcaaaaccgaacaaccccttgtcttgtagcagtgaatgatgtggacaagttcgtccaagc 27338149  T
Q  242 aaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    |||| |||||||| ||||||||   |||||| |  ||||| |||||||| || || ||||||||||||| ||||| ||||||| |||||||||    
T  27338150 aaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaagtgatggtgtgctttcatctc 27338242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 142 - 334
Target Start/End: Original strand, 27398790 - 27398982
Alignment:
Q  142 tgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaac 241  Q
    |||||||| || |||| ||| ||| ||||| |||||||||||||||     | |||| ||||| ||||||| ||||||||||| |||||||| ||||| |    
T  27398790 tgatgtcgtacgtgagtaggatccgcaccatagaaaacaggcaaaaccgaacaaccccttgtcttgtagcagtgaatgatgtggacaagttcgtccaagc 27398889  T
Q  242 aaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    |||| |||||||| ||||||||   |||||| |  ||||| |||||||| || || ||||||||||||| ||||| ||||||| |||||||||    
T  27398890 aaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaagtgatggtgtgctttcatctc 27398982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 329
Target Start/End: Complemental strand, 28181338 - 28181129
Alignment:
Q  120 tgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatg 219  Q
    ||||||||| ||||| || || ||||||||||| ||||||||||||||| || ||||||  |||||||  |  || ||  ||  | || |||| ||||||    
T  28181338 tgctttaccataactgcccttgtgatgtcgcacgtgagaaggttccacatcatagaaaattggcaaaactagacgcccgctttccttgaagcagtgaatg 28181239  T
Q  220 atgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctg 319  Q
    ||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || || ||||| |||||||| || || ||||||||||||| ||||| ||    
T  28181238 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggccttgaaaagtgatg 28181139  T
Q  320 gtgtgatttc 329  Q
     ||| |||||    
T  28181138 atgttatttc 28181129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 26848884 - 26848741
Alignment:
Q  120 tgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatg 219  Q
    ||||| ||| |||||||  || ||||||||||||||||||||||| |  ||| |||||||||| | ||  | || |||||||  | || |||||||||||    
T  26848884 tgcttcaccataactactattctgatgtcgcacatgagaaggttctatgccatagaaaacaggaataaccatgctacccttttccttggagcaatgaatg 26848785  T
Q  220 atgtgaacaagttcatccaaacaaaacgaagaagaggcatagtt 263  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||    
T  26848784 atgtggacaagttcgtccaaacaaaacgaagaagtggcatagtt 26848741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 28150086 - 28149953
Alignment:
Q  195 accctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggat 294  Q
    |||||||| | || |||| ||||| ||||| |||||||| ||||||||||| |||||||| | |||||||||||| || |  ||||| |||||||||||     
T  28150086 accctttgccttgaagcagtgaataatgtggacaagttcgtccaaacaaaatgaagaagaagtatagttgatagagaagattggaatgaaaatcctggac 28149987  T
Q  295 tcatcaatggccttgagaagtgctggtgtgatttc 329  Q
    || |||||||||||||| |||| ||||||||||||    
T  28149986 tcttcaatggccttgag-agtgatggtgtgatttc 28149953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 145 - 334
Target Start/End: Complemental strand, 26937293 - 26937104
Alignment:
Q  145 tgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaa 244  Q
    ||||| || |||||||| |||||  || |||||| ||||||||| |   |||| |||||| || |||| | || |||||| |||||||| ||||||||||    
T  26937293 tgtcgaacgtgagaaggatccacttcatagaaaataggcaaaattagatgaccttttgtcttgaagcagtcaacgatgtggacaagttcgtccaaacaaa 26937194  T
Q  245 acgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    | ||||||| ||||||||||||||| || ||||| ||   ||||| ||| || ||||| ||||||| ||||| |||||||||||| ||||    
T  26937193 atgaagaagtggcatagttgatagagaatacaggtatggcaatcccggaatcttcaattgccttgacaagtgatggtgtgatttcttctc 26937104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 327
Target Start/End: Original strand, 28098320 - 28098539
Alignment:
Q  108 atgctcagccaatgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgt- 206  Q
    ||||| ||| ||||||| ||| ||||| ||  | ||||||||||| ||||||||||||||  || | |||| ||| |||| || || ||||||| || |     
T  28098320 atgcttagctaatgcttcaccataactccccgtctgatgtcgcacgtgagaaggttccacgtcacaaaaaataggaaaaacgaagcaacccttt-tcttc 28098418  T
Q  207 gtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggcc 306  Q
    ||| |  ||||||||||| ||||||||||||||||||||| ||||||| ||||||||  |||| || || ||||| ||||||||||| || || ||||||    
T  28098419 gtaacggtgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcatagttcttagagaagaccggaattaaaatcctggactcttcgatggcc 28098518  T
Q  307 ttgagaagtgctggtgtgatt 327  Q
    |||| ||| | | ||||||||    
T  28098519 ttgacaagggattgtgtgatt 28098539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 329
Target Start/End: Complemental strand, 28185590 - 28185381
Alignment:
Q  120 tgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatg 219  Q
    ||||||||| ||||| ||  | ||||||||||| ||||||||||||||| || ||||||  |||||||  |  || ||  ||  | || |||| | ||||    
T  28185590 tgctttaccataactgcccgtgtgatgtcgcacgtgagaaggttccacatcatagaaaattggcaaaactagacgcccgctttccttgaagcagttaatg 28185491  T
Q  220 atgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctg 319  Q
    ||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || || ||||| |||||||| || || ||||||||||||| ||||| ||    
T  28185490 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggccttgaaaagtgatg 28185391  T
Q  320 gtgtgatttc 329  Q
     ||| |||||    
T  28185390 atgttatttc 28185381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 334
Target Start/End: Original strand, 25506975 - 25507086
Alignment:
Q  223 tgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtg 322  Q
    ||||||||||| |||||||||||    ||||||||||||||||||||||  || |||||||||||||| ||||| ||||||||  |||  | || |||||    
T  25506975 tgaacaagttcctccaaacaaaattttgaagaggcatagttgatagaaagaaccggaataaaaatcctagattcttcaatggcgatgacgactgatggtg 25507074  T
Q  323 tgatttcatctc 334  Q
    ||||||||||||    
T  25507075 tgatttcatctc 25507086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 334
Target Start/End: Complemental strand, 27229339 - 27229242
Alignment:
Q  237 caaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    ||||||||| |||||||| |||||||||  |||||| |  |||||||||||||  ||||| |||||||||||||  |||| |||||||||||| ||||    
T  27229339 caaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatccgagattcgtcaatggccttgacgagtgatggtgtgatttcgtctc 27229242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 329
Target Start/End: Original strand, 28297765 - 28297885
Alignment:
Q  209 agcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggcctt 308  Q
    |||| ||||||||||| |||||||| ||||| ||||| |||||||| ||||| ||| |||| || |||||||| |||||||| |  || ||||||  |||    
T  28297765 agcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcctagtctcttcaatgtgctt 28297864  T
Q  309 gagaagtgctggtgtgatttc 329  Q
    || ||||| |||||| |||||    
T  28297865 gaaaagtgatggtgttatttc 28297885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 329
Target Start/End: Complemental strand, 28514308 - 28514188
Alignment:
Q  209 agcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggcctt 308  Q
    |||| ||||||||||| |||||||| ||||| ||||| |||||||| ||||| ||| |||| || |||||||| |||||||| |  || ||||||  |||    
T  28514308 agcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcctagtctcttcaatgtgctt 28514209  T
Q  309 gagaagtgctggtgtgatttc 329  Q
    || ||||| |||||| |||||    
T  28514208 gaaaagtgatggtgttatttc 28514188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 260
Target Start/End: Complemental strand, 26635825 - 26635774
Alignment:
Q  209 agcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcata 260  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  26635825 agcaatgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcata 26635774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 260
Target Start/End: Complemental strand, 26741791 - 26741740
Alignment:
Q  209 agcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcata 260  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  26741791 agcaatgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcata 26741740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 26959298 - 26959250
Alignment:
Q  212 aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcata 260  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  26959298 aatgaatgatgtggacaagttcatccaaataaaacgaagaagaagcata 26959250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 263
Target Start/End: Complemental strand, 27214618 - 27214498
Alignment:
Q  143 gatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaaca 242  Q
    |||||||||  ||||||||||| || ||| |||||||||| | ||  | |||||| |||  | || |||||||| ||||||| |||||||| ||||||||    
T  27214618 gatgtcgcaagtgagaaggttcaacgccatagaaaacaggtagaacaaggcgacctttttccttggagcaatgagtgatgtggacaagttcgtccaaaca 27214519  T
Q  243 aaacgaagaagaggcatagtt 263  Q
    ||| |||||||  ||||||||    
T  27214518 aaatgaagaagtagcatagtt 27214498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 27234610 - 27234730
Alignment:
Q  143 gatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaaca 242  Q
    |||||||||  ||||||||||| || ||| |||||||||| | ||  | |||||| |||  | || |||||||| ||||||| |||||||| ||||||||    
T  27234610 gatgtcgcaagtgagaaggttcaacgccatagaaaacaggtagaacaaggcgacctttttccttggagcaatgagtgatgtggacaagttcgtccaaaca 27234709  T
Q  243 aaacgaagaagaggcatagtt 263  Q
    ||| |||||||  ||||||||    
T  27234710 aaatgaagaagtagcatagtt 27234730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 330
Target Start/End: Complemental strand, 2184417 - 2184302
Alignment:
Q  215 gaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaag 314  Q
    |||||||||| |||||||| ||||||||||| |||||||| ||||||||  | || || ||||| || ||||| ||||| || |||||||| || | |||    
T  2184417 gaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagttctttgagaaaacagggatgaaaattctggactcttcaatggctttcataag 2184318  T
Q  315 tgctggtgtgatttca 330  Q
    || || ||| ||||||    
T  2184317 tgatgctgttatttca 2184302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 26975185 - 26975134
Alignment:
Q  211 caatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagt 262  Q
    |||||||||||||| |||||||| ||||||||||| |||||||| |||||||    
T  26975185 caatgaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagt 26975134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 330
Target Start/End: Complemental strand, 2185046 - 2184912
Alignment:
Q  196 ccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggatt 295  Q
    ||||||| | || ||||| ||||||| || |||||||| ||||||||||| |||||||| |||||||   | || || ||||| || ||||| |||||||    
T  2185046 ccctttgacttggagcaacgaatgatatggacaagttcgtccaaacaaaatgaagaagaagcatagtcctttgagaaaacagggatgaaaattctggatt 2184947  T
Q  296 catcaatggccttgagaagtgctggtgtgatttca 330  Q
    | |||||||| || | ||| | |||||| ||||||    
T  2184946 cttcaatggctttcacaagcgatggtgttatttca 2184912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 27665169 - 27665223
Alignment:
Q  209 agcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagtt 263  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||  ||||||||    
T  27665169 agcaatgaatgatgtggacaagttcatctaaacaaaatgaagaagtagcatagtt 27665223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 263
Target Start/End: Complemental strand, 26811711 - 26811590
Alignment:
Q  142 tgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaac 241  Q
    ||||||||||| |||||||||||||||||| ||||||| || | ||  | |||||| |||  | || || | | ||||||||| ||||| ||||| ||||    
T  26811711 tgatgtcgcacgtgagaaggttccacaccatagaaaactggtagaacaaggcgacctttttccttgaagtagttaatgatgtggacaagctcatctaaac 26811612  T
Q  242 aaaacgaagaagaggcatagtt 263  Q
    ||||||| ||||  ||||||||    
T  26811611 aaaacgacgaagttgcatagtt 26811590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 269
Target Start/End: Complemental strand, 29826229 - 29826102
Alignment:
Q  142 tgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaac 241  Q
    |||||||||||||||||||| |||||| || |||||| |||||||| ||  ||||||||  || ||   || | ||  || || ||||||||||| || |    
T  29826229 tgatgtcgcacatgagaaggatccacatcatagaaaataggcaaaacgagacgacccttcctcttgacacactcaactatatgcacaagttcatctaagc 29826130  T
Q  242 aaaacgaagaagaggcatagttgataga 269  Q
    ||||||||||||| ||||| ||| ||||    
T  29826129 aaaacgaagaagaagcataattggtaga 29826102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 260
Target Start/End: Complemental strand, 26949863 - 26949745
Alignment:
Q  142 tgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaac 241  Q
    ||||||||||| ||||||||||| ||| || ||||||| |||| ||  | |||||| |||  | || || | |||||||| || |||||||| || ||||    
T  26949863 tgatgtcgcacgtgagaaggttctacatcatagaaaactggcagaacaaggcgacctttttccttgaagtagtgaatgatatggacaagttcgtctaaac 26949764  T
Q  242 aaaacgaagaagaggcata 260  Q
    |||| |||||||| |||||    
T  26949763 aaaatgaagaagaagcata 26949745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 25071789 - 25071741
Alignment:
Q  214 tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagt 262  Q
    ||||||||||| |||||||| || |||||||| |||||||| |||||||    
T  25071789 tgaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 25071741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 171; Significance: 9e-92; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 29 - 334
Target Start/End: Original strand, 3292 - 3599
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatc-ctcatcattttgaaaccnnnnnnnatgctcagccaatgctttac 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  ||||| |  |  ||||||||||||||       ||||||||||||||||| ||    
T  3292 agttagcagcctggctcagagccactttccatcgctgcaacctctccatgttttttcggatcattttgaaacctcttttcatgctcagccaatgcttcac 3391  T
Q  128 cgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaac 227  Q
    | |||||||||||| |||||||||||  || ||||||||||||||| |||||||||| || || ||||||||||||| ||||||| ||||||||||| ||    
T  3392 cataactacctttacgatgtcgcacaatagtaggttccacaccaaataaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaatgatgtggac 3491  T
Q  228 aagttcatccaaacaaaacgaagaagaggcata-gttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgat 326  Q
    |||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||    
T  3492 aagttcgtccaaacaaaatgaagaagaggcataggttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgat 3591  T
Q  327 ttcatctc 334  Q
    ||||||||    
T  3592 ttcatctc 3599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 29 - 334
Target Start/End: Original strand, 14228 - 14532
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||  ||||| | |  ||||||||||||||       ||||||||||||||||| |||    
T  14228 agttagcagcctggctcagagcctctttccatccctgcaacctctccatgtttttcggatcattttgaaacctcttttcatgctcagccaatgcttcacc 14327  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     ||||||||||| ||||||||||| | || ||||||||| || |||||||||||||||| || ||||||||||||| ||||||| ||||| ||||| |||    
T  14328 ataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagtgaattatgtggaca 14427  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||    
T  14428 agttcgtccaaacaaaacgaagaa-aggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgattt 14526  T
Q  329 catctc 334  Q
    ||||||    
T  14527 catctc 14532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 153; Significance: 5e-81; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 29 - 334
Target Start/End: Original strand, 4543 - 4848
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||||||||| ||| |||||||||  |||||||| ||||||||||  ||||||| || ||||||||||||||       ||||||||||||||||| |||    
T  4543 agttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttattcttatcattttgaaacctcttttcatgctcagccaatgcttcacc 4642  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     |||||||||||  |||||||||| | || ||||||||| || |||||||||||||||| || ||||||||||||| ||||||| ||||| ||||| |||    
T  4643 ataactacctttcagatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagtgaattatgtggaca 4742  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| |||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||| | || | |||||||||||    
T  4743 agttcgtccaaacaaaacgaagaaaaggcatagaagatagaaaacacaggaataaaaatcctagattcatcaatggccttgcggagggatggtgtgattt 4842  T
Q  329 catctc 334  Q
    ||||||    
T  4843 catctc 4848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 29 - 334
Target Start/End: Original strand, 13504 - 13809
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||||||||| ||| |||||||||  |||||||| ||||| | ||  ||||||| || ||||||||||||||       |||  |||||||||||| |||    
T  13504 agttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaacctcttttcatgtccagccaatgcttcacc 13603  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     |||| |||| ||||||||||||||| || ||| ||||||||||||||||||||||||| || |||||| |||||| ||||||||||||| |||||||||    
T  13604 ataacgacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaatgaataatgtgaaca 13703  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| ||||| |||||    |||| ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||| |||||||||||    
T  13704 agttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgattt 13803  T
Q  329 catctc 334  Q
    ||||||    
T  13804 catctc 13809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 29 - 334
Target Start/End: Complemental strand, 7840 - 7535
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    |||||||||| ||| |||||||||  |||||||| ||||| | ||  ||||||| || ||||||||||||||       |||  |||||||||||| |||    
T  7840 agttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaacctcttttcatgtccagccaatgcttcacc 7741  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     |||| |||| ||||||||||||||| || ||| ||||||||||||||||||||||||| || |||||| | |||| ||||||||||||| |||||||||    
T  7740 ataacgacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttctgtcttgtagcaatgaataatgtgaaca 7641  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||| ||||| |||||    |||| ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||| |||||||||||    
T  7640 agttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgattt 7541  T
Q  329 catctc 334  Q
    ||||||    
T  7540 catctc 7535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 29 - 302
Target Start/End: Complemental strand, 59885 - 59612
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    ||||||||||| | |||||||||||||||||||||||||||||||  ||||| | |  ||||||||||||||       |||||||||||||||||||||    
T  59885 agttagcagccagactcagagccactttccattgctgcaacctctccatgtttttcgtatcattttgaaacctattttcatgctcagccaatgctttacc 59786  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     || |||||| ||||||||||||||| || ||||||||||||||||||||||||||||| || || |||||| ||  ||||||| ||||||||||| |||    
T  59785 atacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtggaca 59686  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaat 302  Q
    |||   ||||||||| | |||||||| |||||||||  |||||| |  ||||| |||||||||||||| |||||    
T  59685 agtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 59612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 29 - 302
Target Start/End: Complemental strand, 18074077 - 18073804
Alignment:
Q  29 agttagcagcctggctcagagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttacc 128  Q
    ||||||||||| | |||||||||||||||||||||||||||||||  ||||| | |  ||||||||||||||       |||||||||||||||||||||    
T  18074077 agttagcagccagactcagagccactttccattgctgcaacctctccatgtttttcgtatcattttgaaacctattttcatgctcagccaatgctttacc 18073978  T
Q  129 gtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaaca 228  Q
     || |||||| ||||||||||||||| || ||||||||||||||||||||||||||||| || || |||||| ||  ||||||| ||||||||||| |||    
T  18073977 atacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtggaca 18073878  T
Q  229 agttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaat 302  Q
    |||   ||||||||| | |||||||| |||||||||  |||||| |  ||||| |||||||||||||| |||||    
T  18073877 agtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 18073804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 18699403 - 18699562
Alignment:
Q  173 agaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaa 272  Q
    ||||||||||||||| ||  ||||| |||||| ||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18699403 agaaaacaggcaaaacgagacgaccttttgtcttgtagcagtgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaa 18699502  T
Q  273 cacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatc 332  Q
    ||||||||| || ||||| || || |||||||| |||   |||| |||| ||||||||||    
T  18699503 cacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatc 18699562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 18679570 - 18679729
Alignment:
Q  173 agaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaa 272  Q
    |||||||||||||||  |  |||||||||||| ||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18679570 agaaaacaggcaaaacaagacgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaa 18679669  T
Q  273 cacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatc 332  Q
    ||||||||| || ||||| || || |||||||| |||   |||| |||| ||||||||||    
T  18679670 cacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatc 18679729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 154 - 332
Target Start/End: Original strand, 18655461 - 18655639
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| ||| ||||| ||| |||||||||| |||| ||  |||||||||||| ||||||| ||||||||| | |||||||| ||||||||||| |||||||    
T  18655461 tgagtaggatccacgccatagaaaacaggaaaaacgagacgaccctttgtcttgtagcagtgaatgatgcggacaagttcgtccaaacaaaatgaagaag 18655560  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatc 332  Q
    ||||||||||||||||||||||||||||||| ||||| || || | |||||| |||   |||| |||| ||||||||||    
T  18655561 aggcatagttgatagaaaacacaggaataaagatcctagactcttgaatggcattgtcgagtgatggtttgatttcatc 18655639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 332
Target Start/End: Original strand, 18731497 - 18731666
Alignment:
Q  163 tccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagt 262  Q
    ||||| ||| |||||||||||||||  |  |||||||||||| ||||||| || |||||||| |||||||| ||||||||||| ||||||||||||||||    
T  18731497 tccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtgcatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagt 18731596  T
Q  263 tgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatc 332  Q
    ||||||||||||||||||| || ||||| || || |||||||| |||   |||| |||| ||||||||||    
T  18731597 tgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatc 18731666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 163 - 332
Target Start/End: Original strand, 18724078 - 18724247
Alignment:
Q  163 tccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagt 262  Q
    ||||| ||| |||||||||||||||  |  |||||||||||| ||||||| || |||||||| |||||||| | ||||||||| ||||||||||||||||    
T  18724078 tccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtgcatgatgtggacaagttcgttcaaacaaaatgaagaagaggcatagt 18724177  T
Q  263 tgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatc 332  Q
    ||||||||||||||||||| || ||||| || || |||||||| |||   |||| |||| ||||||||||    
T  18724178 tgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatc 18724247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 316
Target Start/End: Original strand, 5090905 - 5091113
Alignment:
Q  108 atgctcagccaatgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtg 207  Q
    ||||||||| | ||||| ||| ||||| ||  | |||| ||||||||||||||||||||||||| |||||| ||||||||  | || ||| |||  | ||    
T  5090905 atgctcagcaagtgcttcaccataacttccagtctgatatcgcacatgagaaggttccacaccatagaaaataggcaaaaccaggcaaccattttccttg 5091004  T
Q  208 tagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggcct 307  Q
     |||| ||||| || || ||||||||||| ||||||||||||||||| ||||||| | |||| || ||   ||| | |||| | ||||| | ||||||||    
T  5091005 gagcagtgaataatatggacaagttcatctaaacaaaacgaagaagaagcatagtggttagagaaaacgataatgacaatcttagattcttgaatggcct 5091104  T
Q  308 tgagaagtg 316  Q
    |||||||||    
T  5091105 tgagaagtg 5091113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 302
Target Start/End: Original strand, 17989019 - 17989185
Alignment:
Q  133 ctacctttatgatgtcgcacatgagaaggttccacaccaaagaaaaca-ggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagt 231  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||||| ||||||| || |  |||||   |  ||||||| ||||||||||| ||||||    
T  17989019 ctacctgtatgatgtcgcacatcaga-ggttccacaccaaagaaaacaaggcaaaacgagga-accctggtt--tgtagcagtgaatgatgtggacaagt 17989114  T
Q  232 tcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaat 302  Q
       ||||||||| | |||||||| |||||||||  |||||| |  ||||| |||||||||||||| |||||    
T  17989115 gtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 17989185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 3e-51; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 130 - 328
Target Start/End: Original strand, 28127639 - 28127837
Alignment:
Q  130 taactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaa 229  Q
    ||||| ||| |||||| |||||||| || ||| ||||| |||||||||||||||||||  | ||||||||||||| ||||||| ||||||||||| ||||    
T  28127639 taactccctgtatgatatcgcacatcagtaggatccacgccaaagaaaacaggcaaaactaggcgaccctttgtcttgtagcagtgaatgatgtgcacaa 28127738  T
Q  230 gttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    |||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||| || ||||| ||||||||||| | |||||  ||||||||||    
T  28127739 gttcgtccaaacaaaatgaagaagaggcatagttggtagaaaatacaggaataaaaattctagattcttcaatggcctttaaaagtgacggtgtgattt 28127837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 130 - 310
Target Start/End: Original strand, 28164323 - 28164502
Alignment:
Q  130 taactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaa 229  Q
    ||||| ||| ||||||||||||||| || ||| ||||| |||| ||||||||||||||  | ||||||||||||| ||||||| ||||||||||| ||||    
T  28164323 taactccctgtatgatgtcgcacatcagtaggatccacgccaa-gaaaacaggcaaaactaggcgaccctttgtcttgtagcagtgaatgatgtggacaa 28164421  T
Q  230 gttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttga 310  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |  ||||  |||||||||||||    
T  28164422 gttcgtccaaacaaaatgaagaagaggcatagttgatagataacacaggaataaaaattcaagatttttcaatggccttga 28164502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 154 - 332
Target Start/End: Original strand, 268341 - 268519
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| ||| ||||| ||| |||| || ||||||||||  ||||||||| || ||||||| ||||||||||| |||||||| ||||||||||| |||||||    
T  268341 tgagtaggatccacgccatagaagacgggcaaaatgagacgaccctttttcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaag 268440  T
Q  254 aggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatc 332  Q
    ||||||||||||||||||||||||||||||||||||| || || |||||||| |||   |||| |||| ||||||||||    
T  268441 aggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagtgatggtttgatttcatc 268519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 154 - 287
Target Start/End: Original strand, 29273767 - 29273900
Alignment:
Q  154 tgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaag 253  Q
    |||| ||| ||||| ||| |||| |||||||||||||  |||||||||||| ||||||| ||||||||||| |||||||| ||||||||||| |||||||    
T  29273767 tgagtaggatccacgccatagaagacaggcaaaatgagacgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaag 29273866  T
Q  254 aggcatagttgatagaaaacacaggaataaaaat 287  Q
    ||||||||||||||||||||||||||||||||||    
T  29273867 aggcatagttgatagaaaacacaggaataaaaat 29273900  T

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Target: scaffold0038 (Bit Score: 77; Significance: 1e-35; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 120 - 332
Target Start/End: Complemental strand, 27672 - 27460
Alignment:
Q  120 tgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatg 219  Q
    ||||||||| ||||| || || ||||||||||||||||||||||||||| || ||||||  |||||||  | ||| |  |||  | || |||||||||||    
T  27672 tgctttaccataactgcccttgtgatgtcgcacatgagaaggttccacatcatagaaaattggcaaaacaaggcgccgattttccttgaagcaatgaatg 27573  T
Q  220 atgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctg 319  Q
    ||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || |||||||| |||||||| ||||| |||||| |||||| ||||| ||    
T  27572 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaagtgatg 27473  T
Q  320 gtgtgatttcatc 332  Q
     ||| ||||||||    
T  27472 atgttatttcatc 27460  T

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Target: scaffold0038; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 108 - 328
Target Start/End: Complemental strand, 43202 - 42982
Alignment:
Q  108 atgctcagccaatgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtg 207  Q
    ||||||||||| ||||||||| ||||| ||  | ||||||| ||| | ||||||||||||| || ||||||  |||||||  | ||| || ||| || ||    
T  43202 atgctcagccagtgctttaccataactgccaatctgatgtctcacgttagaaggttccacatcatagaaaattggcaaaactaggcgtccatttttcttg 43103  T
Q  208 tagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggcct 307  Q
     |||| ||||||||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || |||||||| |||||||| || || ||||||||||    
T  43102 cagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggcct 43003  T
Q  308 tgagaagtgctggtgtgattt 328  Q
    ||| ||||| |||||| ||||    
T  43002 tgaaaagtgatggtgttattt 42982  T

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Target: scaffold0038; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 334
Target Start/End: Complemental strand, 35023 - 34735
Alignment:
Q  46 agagccactttccattgctgcaacctctttatgttatcctcatcattttgaaaccnnnnnnnatgctcagccaatgctttaccgtaactacctttatgat 145  Q
    |||||||  ||||||| |||||||||||  ||||||||||  | |||||| |||        ||| ||| ||| ||||||||| ||||| || || ||||    
T  35023 agagccatcttccatttctgcaacctctccatgttatccttgttattttggaacttctttatatgatcatccagtgctttaccataactgcccttgtgat 34924  T
Q  146 gtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaa 245  Q
    ||||||| ||||||||||||||| || ||||||  |||||||  |  || ||  ||  | || |||| ||||||||||| |||||||| ||||| |||||    
T  34923 gtcgcacgtgagaaggttccacatcatagaaaattggcaaaactagacgcccgctttccttgaagcagtgaatgatgtggacaagttcgtccaagcaaaa 34824  T
Q  246 cgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
     |||||||| ||||| |||||||| || |||||||| |||||||| || || ||||||||||||| ||||| |||||| ||||||||||    
T  34823 tgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatggtgttatttcatctc 34735  T

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Target: scaffold0038; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 329
Target Start/End: Complemental strand, 117032 - 116811
Alignment:
Q  108 atgctcagccaatgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtg 207  Q
    |||||| |||| ||||||||| ||||| || || ||||||||||| ||||||||||||||| |  ||||||| ||| |||  | ||| || |||    ||    
T  117032 atgctcggccagtgctttaccataactgcccttgtgatgtcgcacgtgagaaggttccacatcgtagaaaactggctaaactaggcgcccattttctttg 116933  T
Q  208 tagcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggcct 307  Q
     |||| ||||| ||||| |||||||||||||| ||||| |||||||| ||||| |||||||| || | |||||| |||||||| || || ||||||||||    
T  116932 aagcagtgaataatgtggacaagttcatccaagcaaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcctagactcttcaatggcct 116833  T
Q  308 tgagaagtgctggtgtgatttc 329  Q
    ||| |||||  ||||| |||||    
T  116832 tgaaaagtgacggtgttatttc 116811  T

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Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 332
Target Start/End: Complemental strand, 3279823 - 3279700
Alignment:
Q  209 agcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggcctt 308  Q
    |||||||||||||||| |||||||| |||||||||||   |||||| |||||||||||||| || || |||||||||||| |||| || || ||||||||    
T  3279823 agcaatgaatgatgtggacaagttcgtccaaacaaaatatagaagaagcatagttgatagagaagaccggaataaaaatcatggactcttcgatggcctt 3279724  T
Q  309 gagaagtgctggtgtgatttcatc 332  Q
    || ||||| | |||||||||||||    
T  3279723 gacaagtgattgtgtgatttcatc 3279700  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 17993736 - 17993789
Alignment:
Q  209 agcaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagt 262  Q
    |||| ||||||||||| |||||||| || |||||||| |||||||| |||||||    
T  17993736 agcattgaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 17993789  T

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Target: scaffold1254 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 10 - 94
Alignment:
Q  250 gaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    |||| ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||| |||||||||||||||||    
T  10 gaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctc 94  T

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Target: scaffold0019 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 329
Target Start/End: Original strand, 58245 - 58454
Alignment:
Q  120 tgctttaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatg 219  Q
    ||||||||| ||||| || |  ||||||||||| ||||||||||||||  || ||||||  |||||||  | ||| || | |  |  | |||| ||||||    
T  58245 tgctttaccataacttccatcttgatgtcgcacgtgagaaggttccacgtcatagaaaattggcaaaactaggcgcccatattcctcgaagcagtgaatg 58344  T
Q  220 atgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctg 319  Q
    ||||| |||||||| | ||| ||||| |||||||| |||||||||||||| || || ||||| |||||||| || || | ||||||||||| ||||| ||    
T  58345 atgtggacaagttcgttcaagcaaaatgaagaagaagcatagttgatagacaagacgggaatgaaaatcctagactctttaatggccttgaaaagtgatg 58444  T
Q  320 gtgtgatttc 329  Q
    |||| |||||    
T  58445 gtgttatttc 58454  T

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Target: chr5 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 142 - 328
Target Start/End: Complemental strand, 16689213 - 16689027
Alignment:
Q  142 tgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaatgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaac 241  Q
    ||||||| |||||| ||||| |||||  || |||||||||||||||  |  ||||| ||||   || ||| || ||||||||  ||||||||||||||||    
T  16689213 tgatgtctcacatgcgaaggatccacgtcatagaaaacaggcaaaactagccgaccttttgcactgaagccatcaatgatgttgacaagttcatccaaac 16689114  T
Q  242 aaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgattt 328  Q
    ||||||| ||| | ||||||||  |||||||||| || ||   |||||| || || ||||| ||||||| ||||| |||||||||||    
T  16689113 aaaacgaggaaaatgcatagttcttagaaaacacggggattgcaatccttgagtcttcaattgccttgataagtgatggtgtgattt 16689027  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 214467 - 214511
Alignment:
Q  290 tggattcatcaatggccttgagaagtgctggtgtgatttcatctc 334  Q
    ||||||||||||| ||||||| ||||| |||||| ||||||||||    
T  214467 tggattcatcaattgccttgaaaagtgatggtgtaatttcatctc 214511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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