View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0412_low_108 (Length: 319)
Name: NF0412_low_108
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0412_low_108 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 735145 - 734884
Alignment:
| Q |
1 |
acccttctatgtaaaagtgagttttttgtgctaactagcactcttgtgtgttagagctagtaaaatggatacttgtgagatcaagtcaccagaagcacct |
100 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
735145 |
acccttctatgtaaaagtgagttttttgtgctatctagcactcttgtgtgttagagctagtaaaatggatacttgtgagatcaagtcaccagaagcacct |
735046 |
T |
|
| Q |
101 |
caacaagggacaccatgcacttcaatgagcagaaagaaacttggtattttcttcattgagtctgaggatagaaggatggctttagggcgaggttatacaa |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
735045 |
caacaagggacaccatgcacttcaatgagcagaaagaaacttggtattttcttcattgagtctgaggatagaaggatggctttagggcgaggttatacaa |
734946 |
T |
|
| Q |
201 |
gaggttctacacctgttaatattcatggaaaatccattgaggatctttcaaaaactggtggt |
262 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
734945 |
gaggttctacacctgttaatattcatggaaaatccattgaggatctttcaaaaactggtggt |
734884 |
T |
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