View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0412_low_113 (Length: 316)
Name: NF0412_low_113
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0412_low_113 |
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Alignment Details
Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 95 - 241
Target Start/End: Original strand, 40051866 - 40052012
Alignment:
| Q |
95 |
aatcggactagaaacttggttatgatcaggataactacgttcctgaacatgtgcaattttcctaaagaatgaactcttaaagaatctatcagattcctcc |
194 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40051866 |
aatcggactagaaacttggttatgatcaggataactacgttcctgaacatgtgcaattttcctaaagaatgaactcttaaagaatctatcagattcctcc |
40051965 |
T |
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| Q |
195 |
ataacatgatcgggttccactacttcaggaacagtctctctcctttg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40051966 |
ataacatgatcgggttccactacttcaggaacagtctctctcctttg |
40052012 |
T |
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