View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0412_low_171 (Length: 287)
Name: NF0412_low_171
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0412_low_171 |
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Alignment Details
Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 55 - 240
Target Start/End: Complemental strand, 6945911 - 6945726
Alignment:
| Q |
55 |
tgccattaaagaaaactaaaatgagacctccaagacaactaatacagaaacagtgagacaaaacaccaatgcatcaatctggtctgaaacttcaggtcac |
154 |
Q |
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| T |
6945911 |
tgccattaaagaaaactaaaatgagacctccaagacaactaatacagaaacagtgagacaaaacaccaatgcatcaatctggtctgaaacttcaggtcac |
6945812 |
T |
|
| Q |
155 |
tatatcgcccatacacaccgtcggattcacacaccattgattaatgttgtaacctgtgctctttgattcatgcaaatctggttcat |
240 |
Q |
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| T |
6945811 |
tatatcgcccatacacaccctcggattcacacaccattgattaatgttgtaacctgtgctctttgattcatgcaaatctggttcat |
6945726 |
T |
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