View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0412_low_173 (Length: 286)
Name: NF0412_low_173
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0412_low_173 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 41784311 - 41784494
Alignment:
| Q |
77 |
atgaagttaaacaactaagcatacaaaatactgagctacagaatcatgtcatggaacttgagtcgttgttgaaagagaaacaaggtgtggtatctgatct |
176 |
Q |
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| T |
41784311 |
atgaagttaaacaactaagcatacaaaatactgagctacagaatcatgtcatggaacttgagtcgttgttgaaagagaaacaaggtgtggtatctgatct |
41784410 |
T |
|
| Q |
177 |
ggagatgaaactcaacaacagcgaggaacaagcaaaatccaacattgtaatattgatggcacaagtcaatgaacttgtacttga |
260 |
Q |
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| T |
41784411 |
ggagatgaaactcaacaacagcgaggaacaagcaaaatccaacattgtaatattgatggcacaagtcaacgaacttgtacttga |
41784494 |
T |
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