View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0412_low_198 (Length: 275)
Name: NF0412_low_198
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0412_low_198 |
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Alignment Details
Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 30 - 216
Target Start/End: Original strand, 5893244 - 5893430
Alignment:
| Q |
30 |
atgaatgaggtgcaacagtttgggttagggtctaacctaggtgattttattcctttatttagatggtttgattatagtggttaccataagaagataaaaa |
129 |
Q |
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| T |
5893244 |
atgaatgaggtgcaacagtttgggttagggtctaacctaggtgattttattcctttatttagatggtttgattttagtggttaccataagaagataaaaa |
5893343 |
T |
|
| Q |
130 |
gggttggggagaagatggatgcacttttccaaggacttcttgatgataatcgtaataatagaaaggaaaataagaataccatgattg |
216 |
Q |
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| T |
5893344 |
tggttggggagaagatggatgcacttttccaaggacttcttgatgataatcgtaataatagaaaggaaaataagaataccatgattg |
5893430 |
T |
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