View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0412_low_217 (Length: 268)

Name: NF0412_low_217
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0412_low_217
NF0412_low_217
[»] chr1 (21 HSPs)
chr1 (1-249)||(11944951-11945198)
chr1 (1-249)||(43630867-43631114)
chr1 (1-248)||(11809824-11810078)
chr1 (1-160)||(636446-636596)
chr1 (132-249)||(20032180-20032297)
chr1 (1-91)||(20032096-20032185)
chr1 (127-184)||(21406275-21406332)
chr1 (127-184)||(22132098-22132155)
chr1 (114-184)||(29533909-29533980)
chr1 (127-184)||(41801278-41801335)
chr1 (137-184)||(16370947-16370994)
chr1 (127-180)||(20230138-20230191)
chr1 (127-184)||(39245170-39245227)
chr1 (127-184)||(39248725-39248782)
chr1 (127-184)||(41389664-41389721)
chr1 (1-61)||(29534363-29534423)
chr1 (1-58)||(636413-636467)
chr1 (1-61)||(20316017-20316073)
chr1 (146-184)||(32649089-32649127)
chr1 (1-57)||(636380-636433)
chr1 (127-184)||(33796055-33796112)
[»] chr4 (34 HSPs)
chr4 (1-249)||(37839066-37839313)
chr4 (1-249)||(42597795-42598042)
chr4 (1-184)||(28384873-28385056)
chr4 (127-184)||(631747-631804)
chr4 (127-184)||(10711847-10711904)
chr4 (127-184)||(10925617-10925674)
chr4 (127-184)||(13813832-13813889)
chr4 (127-184)||(13818320-13818377)
chr4 (127-184)||(22634926-22634983)
chr4 (127-184)||(24048384-24048441)
chr4 (127-184)||(27532774-27532831)
chr4 (1-61)||(4831781-4831838)
chr4 (1-61)||(4835076-4835133)
chr4 (127-184)||(12422965-12423022)
chr4 (127-184)||(17052445-17052502)
chr4 (137-184)||(15533241-15533288)
chr4 (137-184)||(36036974-36037021)
chr4 (137-184)||(49549092-49549139)
chr4 (127-177)||(23996966-23997016)
chr4 (146-184)||(30145805-30145843)
chr4 (127-184)||(15223568-15223625)
chr4 (1-61)||(4831814-4831874)
chr4 (1-61)||(4835109-4835169)
chr4 (1-61)||(30146216-30146276)
chr4 (137-184)||(18211626-18211673)
chr4 (1-61)||(9923096-9923152)
chr4 (1-61)||(11479870-11479926)
chr4 (1-61)||(14746956-14747012)
chr4 (1-59)||(28385034-28385090)
chr4 (127-184)||(20158447-20158504)
chr4 (127-184)||(20163898-20163955)
chr4 (1-60)||(9923031-9923087)
chr4 (1-55)||(11479707-11479757)
chr4 (1-55)||(11479772-11479822)
[»] chr3 (66 HSPs)
chr3 (1-249)||(45220837-45221084)
chr3 (33-249)||(5841123-5841339)
chr3 (1-249)||(2249091-2249338)
chr3 (1-184)||(41156-41339)
chr3 (1-184)||(16325915-16326098)
chr3 (1-184)||(16840080-16840260)
chr3 (132-235)||(14648275-14648378)
chr3 (52-184)||(11912449-11912581)
chr3 (1-91)||(14648191-14648280)
chr3 (1-57)||(5841483-5841539)
chr3 (178-249)||(11912291-11912362)
chr3 (1-135)||(13435924-13436055)
chr3 (178-249)||(51608665-51608736)
chr3 (1-135)||(8928709-8928840)
chr3 (114-184)||(10834927-10834998)
chr3 (175-230)||(16840344-16840399)
chr3 (127-184)||(4590160-4590217)
chr3 (127-184)||(8491732-8491789)
chr3 (127-184)||(12853363-12853420)
chr3 (127-184)||(14670048-14670105)
chr3 (127-184)||(16795525-16795582)
chr3 (129-184)||(17318511-17318566)
chr3 (1-59)||(16325881-16325937)
chr3 (127-184)||(13435840-13435897)
chr3 (1-61)||(8928675-8928733)
chr3 (137-184)||(3801992-3802039)
chr3 (137-184)||(12304196-12304243)
chr3 (137-184)||(14764805-14764852)
chr3 (137-184)||(18899475-18899522)
chr3 (137-184)||(20249859-20249906)
chr3 (137-184)||(54519619-54519666)
chr3 (1-59)||(5841517-5841573)
chr3 (146-184)||(14681572-14681610)
chr3 (195-245)||(16840452-16840502)
chr3 (131-184)||(8928871-8928924)
chr3 (127-184)||(16751901-16751958)
chr3 (127-180)||(18933355-18933408)
chr3 (127-180)||(30064411-30064464)
chr3 (1-57)||(41386-41440)
chr3 (1-60)||(13436066-13436122)
chr3 (1-56)||(16325647-16325700)
chr3 (1-57)||(16325814-16325868)
chr3 (1-61)||(34852939-34852999)
chr3 (137-184)||(9532280-9532327)
chr3 (127-182)||(14068062-14068117)
chr3 (1-60)||(16840012-16840069)
chr3 (137-184)||(29545948-29545995)
chr3 (1-59)||(41317-41373)
chr3 (1-58)||(41352-41406)
chr3 (1-58)||(41419-41473)
chr3 (1-58)||(5841552-5841606)
chr3 (1-61)||(14965828-14965884)
chr3 (146-184)||(15463900-15463938)
chr3 (1-58)||(16325714-16325768)
chr3 (1-58)||(16325781-16325835)
chr3 (1-58)||(16325848-16325902)
chr3 (146-184)||(19774220-19774258)
chr3 (146-184)||(23372562-23372600)
chr3 (137-183)||(38312867-38312913)
chr3 (146-184)||(51299555-51299593)
chr3 (1-57)||(41453-41506)
chr3 (127-184)||(5219869-5219926)
chr3 (127-184)||(11853728-11853785)
chr3 (1-57)||(16325681-16325734)
chr3 (1-61)||(34852906-34852963)
chr3 (32-60)||(16840007-16840035)
[»] chr5 (32 HSPs)
chr5 (1-249)||(19075846-19076093)
chr5 (1-249)||(31253085-31253332)
chr5 (1-184)||(33473805-33473988)
chr5 (1-184)||(36459570-36459749)
chr5 (132-235)||(43243764-43243867)
chr5 (1-91)||(43243680-43243769)
chr5 (178-249)||(36459412-36459483)
chr5 (127-184)||(15238117-15238174)
chr5 (127-184)||(22120591-22120648)
chr5 (1-61)||(10816217-10816277)
chr5 (1-57)||(33473637-33473691)
chr5 (1-57)||(33473704-33473758)
chr5 (137-184)||(19510484-19510531)
chr5 (137-184)||(28372091-28372138)
chr5 (137-184)||(37600018-37600065)
chr5 (1-59)||(33473771-33473827)
chr5 (127-184)||(10751839-10751896)
chr5 (1-61)||(23538246-23538303)
chr5 (137-184)||(22339034-22339081)
chr5 (137-184)||(22749183-22749230)
chr5 (137-184)||(38146428-38146475)
chr5 (137-184)||(41878661-41878708)
chr5 (1-61)||(6765599-6765656)
chr5 (1-58)||(33473604-33473658)
chr5 (1-58)||(33473671-33473725)
chr5 (1-58)||(33473738-33473792)
chr5 (1-61)||(36459934-36459990)
chr5 (127-184)||(18354819-18354876)
chr5 (127-184)||(20912252-20912309)
chr5 (127-168)||(22108449-22108490)
chr5 (1-55)||(31252953-31253003)
chr5 (32-60)||(36459796-36459824)
[»] chr8 (51 HSPs)
chr8 (1-249)||(44494098-44494345)
chr8 (1-249)||(21967867-21968122)
chr8 (1-249)||(21980707-21980962)
chr8 (1-249)||(21985690-21985945)
chr8 (1-249)||(22009071-22009326)
chr8 (1-184)||(11774318-11774501)
chr8 (1-249)||(11251962-11252204)
chr8 (1-249)||(34950043-34950290)
chr8 (1-184)||(8414850-8415033)
chr8 (1-214)||(22000658-22000873)
chr8 (1-184)||(21328588-21328768)
chr8 (32-184)||(42560786-42560938)
chr8 (178-249)||(42561025-42561096)
chr8 (127-184)||(21386181-21386238)
chr8 (1-60)||(21328779-21328836)
chr8 (127-184)||(23427848-23427905)
chr8 (127-184)||(23913287-23913344)
chr8 (1-57)||(11774548-11774602)
chr8 (1-57)||(22000557-22000611)
chr8 (1-57)||(22005536-22005590)
chr8 (1-60)||(16197694-16197751)
chr8 (1-60)||(21328745-21328802)
chr8 (210-249)||(22003050-22003089)
chr8 (1-59)||(8414816-8414872)
chr8 (1-59)||(11774479-11774535)
chr8 (127-180)||(44385833-44385886)
chr8 (1-61)||(21967833-21967891)
chr8 (1-57)||(21980606-21980660)
chr8 (1-61)||(21980673-21980731)
chr8 (1-57)||(21985589-21985643)
chr8 (1-61)||(21985656-21985714)
chr8 (1-61)||(22000624-22000682)
chr8 (1-61)||(22009037-22009095)
chr8 (1-58)||(8414783-8414837)
chr8 (1-58)||(11774514-11774568)
chr8 (1-58)||(11774581-11774635)
chr8 (1-61)||(22352536-22352592)
chr8 (1-57)||(8414750-8414803)
chr8 (1-57)||(11774615-11774668)
chr8 (127-184)||(14399092-14399149)
chr8 (1-61)||(18024729-18024786)
chr8 (127-180)||(21409927-21409980)
chr8 (127-180)||(21804419-21804472)
chr8 (146-183)||(27942704-27942741)
chr8 (1-56)||(42560625-42560676)
chr8 (32-60)||(16197728-16197756)
chr8 (32-60)||(21328813-21328841)
chr8 (32-60)||(21980534-21980562)
chr8 (32-60)||(21985517-21985545)
chr8 (32-60)||(22000552-22000580)
chr8 (32-60)||(22005531-22005559)
[»] chr7 (69 HSPs)
chr7 (33-249)||(11394784-11395000)
chr7 (1-248)||(16185474-16185728)
chr7 (1-184)||(41283667-41283850)
chr7 (1-184)||(15213070-15213249)
chr7 (127-200)||(18301357-18301430)
chr7 (1-57)||(11394584-11394640)
chr7 (178-249)||(15212912-15212983)
chr7 (127-184)||(10607320-10607377)
chr7 (127-184)||(11660304-11660361)
chr7 (127-184)||(13891652-13891709)
chr7 (127-184)||(13892035-13892092)
chr7 (127-184)||(20486764-20486821)
chr7 (127-184)||(39268313-39268370)
chr7 (127-184)||(7520215-7520272)
chr7 (127-184)||(9752507-9752564)
chr7 (127-184)||(25928371-25928428)
chr7 (137-184)||(146522-146569)
chr7 (1-68)||(833606-833673)
chr7 (1-68)||(1198786-1198853)
chr7 (137-184)||(14420809-14420856)
chr7 (137-184)||(16005026-16005073)
chr7 (137-184)||(18606360-18606407)
chr7 (137-184)||(18871319-18871366)
chr7 (146-184)||(838152-838190)
chr7 (146-184)||(1203332-1203370)
chr7 (1-59)||(11394550-11394606)
chr7 (146-184)||(16109994-16110032)
chr7 (1-60)||(34957122-34957182)
chr7 (1-59)||(41283828-41283884)
chr7 (1-61)||(837602-837659)
chr7 (1-61)||(1202782-1202839)
chr7 (1-61)||(10501774-10501831)
chr7 (1-57)||(15213364-15213421)
chr7 (127-184)||(16582443-16582500)
chr7 (127-184)||(18424257-18424314)
chr7 (127-180)||(26291183-26291236)
chr7 (1-61)||(34957055-34957112)
chr7 (127-180)||(39721222-39721275)
chr7 (1-60)||(10501645-10501701)
chr7 (1-60)||(16251782-16251838)
chr7 (1-60)||(16323735-16323791)
chr7 (1-60)||(29003776-29003832)
chr7 (1-60)||(34957159-34957215)
chr7 (137-184)||(10897906-10897953)
chr7 (146-184)||(1860040-1860078)
chr7 (1-61)||(10501613-10501669)
chr7 (1-61)||(11092571-11092627)
chr7 (1-58)||(11394517-11394571)
chr7 (1-61)||(12556780-12556836)
chr7 (146-184)||(13919431-13919469)
chr7 (1-61)||(16323767-16323823)
chr7 (1-58)||(41283863-41283917)
chr7 (127-184)||(2833481-2833538)
chr7 (1-61)||(10501807-10501864)
chr7 (127-180)||(15083252-15083305)
chr7 (1-61)||(15116231-15116288)
chr7 (32-61)||(15213397-15213426)
chr7 (1-57)||(41283897-41283950)
chr7 (1-68)||(837635-837699)
chr7 (1-68)||(1202815-1202879)
chr7 (1-55)||(9320747-9320797)
chr7 (1-60)||(10501873-10501929)
chr7 (1-60)||(11092539-11092595)
chr7 (1-55)||(15112632-15112682)
chr7 (32-60)||(15213328-15213356)
chr7 (1-55)||(16185810-16185860)
chr7 (32-60)||(16251547-16251575)
chr7 (32-60)||(16251744-16251772)
chr7 (31-91)||(16251909-16251969)
[»] chr6 (48 HSPs)
chr6 (33-249)||(28707816-28708032)
chr6 (1-247)||(9622788-9623032)
chr6 (1-184)||(23955391-23955574)
chr6 (1-184)||(34297650-34297829)
chr6 (132-235)||(14594666-14594769)
chr6 (137-235)||(7429398-7429496)
chr6 (32-184)||(25737914-25738066)
chr6 (1-57)||(28708176-28708232)
chr6 (1-88)||(7429499-7429585)
chr6 (178-249)||(1254019-1254090)
chr6 (1-91)||(14594582-14594671)
chr6 (178-249)||(34297916-34297987)
chr6 (127-184)||(18918580-18918637)
chr6 (175-230)||(25737775-25737830)
chr6 (127-180)||(23400704-23400757)
chr6 (127-184)||(23538003-23538060)
chr6 (1-57)||(23955621-23955675)
chr6 (1-57)||(23955688-23955742)
chr6 (137-184)||(12941243-12941290)
chr6 (137-184)||(27222854-27222901)
chr6 (146-184)||(1254181-1254219)
chr6 (1-59)||(23955552-23955608)
chr6 (1-59)||(28708210-28708266)
chr6 (1-54)||(29417150-29417200)
chr6 (127-184)||(2076308-2076365)
chr6 (147-184)||(28290914-28290951)
chr6 (127-182)||(18953483-18953538)
chr6 (146-184)||(4475817-4475855)
chr6 (1-61)||(18927623-18927679)
chr6 (1-61)||(19953283-19953339)
chr6 (1-58)||(23955587-23955641)
chr6 (1-58)||(23955654-23955708)
chr6 (1-58)||(23955721-23955775)
chr6 (1-58)||(28708245-28708299)
chr6 (127-184)||(16622857-16622914)
chr6 (1-61)||(16885564-16885621)
chr6 (32-61)||(25738168-25738197)
chr6 (127-184)||(27555561-27555618)
chr6 (127-184)||(31479462-31479519)
chr6 (1-60)||(18927493-18927549)
chr6 (1-55)||(18927597-18927647)
chr6 (1-60)||(19953348-19953404)
chr6 (1-61)||(20182460-20182517)
chr6 (1-61)||(22153474-22153531)
chr6 (32-60)||(34297329-34297357)
chr6 (32-60)||(34297400-34297428)
chr6 (32-60)||(34297505-34297533)
chr6 (32-60)||(34297574-34297602)
[»] scaffold0815 (2 HSPs)
scaffold0815 (1-215)||(1-214)
scaffold0815 (1-61)||(257-314)
[»] scaffold0016 (3 HSPs)
scaffold0016 (35-249)||(173133-173338)
scaffold0016 (1-62)||(173071-173131)
scaffold0016 (32-60)||(172865-172893)
[»] scaffold0679 (4 HSPs)
scaffold0679 (33-177)||(3171-3315)
scaffold0679 (1-57)||(2971-3027)
scaffold0679 (1-59)||(2937-2993)
scaffold0679 (1-58)||(2904-2958)
[»] chr2 (12 HSPs)
chr2 (1-184)||(37379058-37379240)
chr2 (1-68)||(22702873-22702940)
chr2 (1-61)||(22702916-22702973)
chr2 (130-184)||(21074510-21074564)
chr2 (127-184)||(9784016-9784073)
chr2 (137-184)||(6481806-6481853)
chr2 (137-184)||(6485273-6485320)
chr2 (137-184)||(9240696-9240743)
chr2 (137-184)||(19663567-19663614)
chr2 (137-184)||(20260279-20260326)
chr2 (1-61)||(18359172-18359229)
chr2 (1-60)||(34874617-34874673)
[»] scaffold0001 (12 HSPs)
scaffold0001 (1-144)||(175428-175571)
scaffold0001 (175-249)||(163708-163782)
scaffold0001 (1-122)||(163476-163594)
scaffold0001 (1-135)||(153654-153785)
scaffold0001 (148-184)||(163588-163624)
scaffold0001 (1-57)||(175618-175672)
scaffold0001 (1-59)||(175549-175605)
scaffold0001 (1-61)||(153621-153678)
scaffold0001 (1-58)||(175584-175638)
scaffold0001 (1-58)||(175651-175705)
scaffold0001 (32-60)||(153284-153312)
scaffold0001 (32-60)||(153350-153378)
[»] scaffold0098 (2 HSPs)
scaffold0098 (132-249)||(34011-34128)
scaffold0098 (1-91)||(34123-34212)
[»] scaffold2015 (2 HSPs)
scaffold2015 (132-235)||(444-547)
scaffold2015 (1-91)||(360-449)
[»] scaffold0599 (2 HSPs)
scaffold0599 (52-184)||(4143-4275)
scaffold0599 (178-249)||(3985-4056)
[»] scaffold0015 (2 HSPs)
scaffold0015 (1-93)||(208655-208746)
scaffold0015 (1-61)||(208722-208780)
[»] scaffold0293 (1 HSPs)
scaffold0293 (127-198)||(21339-21410)
[»] scaffold0575 (1 HSPs)
scaffold0575 (127-184)||(6960-7017)
[»] scaffold0380 (1 HSPs)
scaffold0380 (127-184)||(3996-4053)
[»] scaffold0142 (1 HSPs)
scaffold0142 (127-184)||(8739-8796)
[»] scaffold0139 (1 HSPs)
scaffold0139 (127-184)||(23937-23994)
[»] scaffold0031 (1 HSPs)
scaffold0031 (127-184)||(37202-37259)
[»] scaffold0029 (1 HSPs)
scaffold0029 (127-184)||(62839-62896)
[»] scaffold0013 (1 HSPs)
scaffold0013 (127-184)||(74331-74388)
[»] scaffold0124 (1 HSPs)
scaffold0124 (129-184)||(25569-25624)
[»] scaffold0109 (1 HSPs)
scaffold0109 (127-182)||(37197-37252)
[»] scaffold0080 (10 HSPs)
scaffold0080 (127-184)||(28494-28551)
scaffold0080 (127-184)||(33959-34016)
scaffold0080 (1-133)||(28580-28709)
scaffold0080 (1-133)||(34045-34174)
scaffold0080 (1-61)||(28685-28742)
scaffold0080 (1-61)||(28718-28775)
scaffold0080 (32-61)||(28751-28780)
scaffold0080 (1-61)||(34150-34207)
scaffold0080 (1-61)||(34183-34240)
scaffold0080 (32-61)||(34216-34245)
[»] scaffold0066 (2 HSPs)
scaffold0066 (1-61)||(48145-48202)
scaffold0066 (1-61)||(48109-48169)
[»] scaffold1427 (1 HSPs)
scaffold1427 (137-184)||(222-269)
[»] scaffold0842 (1 HSPs)
scaffold0842 (137-184)||(5264-5311)
[»] scaffold0337 (1 HSPs)
scaffold0337 (137-184)||(10831-10878)
[»] scaffold0026 (1 HSPs)
scaffold0026 (137-184)||(109623-109670)
[»] scaffold0012 (1 HSPs)
scaffold0012 (137-184)||(224152-224199)
[»] scaffold0021 (2 HSPs)
scaffold0021 (4-61)||(146003-146057)
scaffold0021 (1-61)||(145967-146027)
[»] scaffold0327 (1 HSPs)
scaffold0327 (147-184)||(18845-18882)
[»] scaffold0577 (1 HSPs)
scaffold0577 (1-61)||(7626-7682)
[»] scaffold0544 (1 HSPs)
scaffold0544 (146-184)||(3535-3573)
[»] scaffold0434 (2 HSPs)
scaffold0434 (1-61)||(7281-7337)
scaffold0434 (1-60)||(7313-7368)
[»] scaffold0200 (1 HSPs)
scaffold0200 (146-184)||(10789-10827)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-61)||(54211-54267)
[»] scaffold0410 (1 HSPs)
scaffold0410 (127-184)||(14866-14923)
[»] scaffold0877 (1 HSPs)
scaffold0877 (1-60)||(3063-3119)
[»] scaffold0802 (1 HSPs)
scaffold0802 (1-55)||(5925-5975)
[»] scaffold0486 (1 HSPs)
scaffold0486 (127-183)||(8600-8656)


Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 11945198 - 11944951
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11945198 agaggtggtgtactcttactttg-ttgt-tgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 11945101  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 199  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11945100 tagtgttgaatgcgaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 11945001  T
Q  200 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11945000 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 11944951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 43630867 - 43631114
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43630867 agaggtggtgtactcttactttg-ttgt-tgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 43630964  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 199  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43630965 tagtgttgaatgcgaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 43631064  T
Q  200 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43631065 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 43631114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 11809824 - 11810078
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgtt-ataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||||||||||||||| |||| |||  || ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  11809824 agaggtggtgtactcttactttg-ttgt-tgtccatgagaggtggtatactcttacgttggttatgttgatgagtatgacgaggttatgatgatcatcta 11809921  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagtt--------gtcttcta 191  Q
    ||||||||||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||        ||||||||    
T  11809922 tagtgttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggtcatgttaagttgataagtcgtcttcta 11810021  T
Q  192 ttcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgt 248  Q
    |||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  11810022 ttcacgagcattaaggggatgttaagaagaattaatattgagtgtatatgatgatgt 11810078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 636446 - 636596
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    |||||||||||||||||||||| || || | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  636446 agaggtggtgtactcttacttt-atcgttt-ttctaagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatct----- 636538  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgta 160  Q
      |||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||    
T  636539 --tgttgaatgcgatgttgttatgatattacatgaggttacctatgagttgttaaatgta 636596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 132 - 249
Target Start/End: Original strand, 20032180 - 20032297
Alignment:
Q  132 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 231  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  20032180 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 20032279  T
Q  232 agtgtatatgatgatgtc 249  Q
    |||| ||||| |||||||    
T  20032280 agtgcatatggtgatgtc 20032297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20032096 - 20032185
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 91  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  20032096 agaggtggtgtactcttactttg-ttgt-tgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgaggttatgatg 20032185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 21406332 - 21406275
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  21406332 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 21406275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 22132098 - 22132155
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  22132098 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22132155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 29533980 - 29533909
Alignment:
Q  114 aggttgttatgatattacatgaggttac-ctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||||||||||||| ||||  ||| ||||||||||||||  ||||||| |||||||||||||||    
T  29533980 aggttgttatgatattacatgatgttaagctatgagttgttaaatgtgtttgatgatggttatgttaagttg 29533909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 41801278 - 41801335
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  41801278 attacatgatattatctatgagttgttaaatgtacttgatgatggttatgttaagttg 41801335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 16370994 - 16370947
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  16370994 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16370947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 20230138 - 20230191
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 180  Q
    ||||||||| |||| ||| |||||||||| |||||||||||| |||||||||||    
T  20230138 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 20230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 39245170 - 39245227
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  39245170 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 39245227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 39248725 - 39248782
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  39248725 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 39248782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 41389664 - 41389721
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  41389664 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 41389721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29534423 - 29534363
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    |||||| |||||||||||||||| |  | | |||||||||||||||||||||||| |||||    
T  29534423 agaggtagtgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtt 29534363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 636413 - 636467
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  636413 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 636467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20316073 - 20316017
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  20316073 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacattgtt 20316017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 32649127 - 32649089
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  32649127 gagttgttaaatgtacttgatgattgttatgttaagttg 32649089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 636380 - 636433
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    ||||||||||||||||||||    |||||| ||||||||||||||||||||||||||    
T  636380 agaggtggtgtactcttactcg--ttgtct-ttataagaggtggtgtactcttactt 636433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 33796112 - 33796055
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  33796112 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 33796055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 37839066 - 37839313
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37839066 agaggtggtgtactcttactttg-ttgt-tgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 37839163  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 199  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37839164 tagtgttgaatgcgaggttgttatgatattacacgaggttacctacaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 37839263  T
Q  200 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37839264 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 37839313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 42597795 - 42598042
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42597795 agaggtggtgtactcttactttg-ttgt-tgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttata 42597892  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 199  Q
    || |||||||||  ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42597893 taatgttgaatgagaggttgttatgatattacaagaggttacctaaaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 42597992  T
Q  200 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42597993 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 42598042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 28385056 - 28384873
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||    
T  28385056 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgatgttatgatgatcttttat 28384957  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
      |||||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28384956 gatgttgaatgtggggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 28384873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 631747 - 631804
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  631747 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 10711904 - 10711847
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10711904 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 10711847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 10925674 - 10925617
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10925674 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 10925617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 13813832 - 13813889
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  13813832 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13813889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 13818320 - 13818377
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  13818320 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13818377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 22634926 - 22634983
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  22634926 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22634983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 24048384 - 24048441
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  24048384 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 24048441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 27532831 - 27532774
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  27532831 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 27532774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4831781 - 4831838
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||    
T  4831781 agaggtggtgtactcttactttg-ttgt--gttataagaggtggtgtactcttacgttgtt 4831838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4835076 - 4835133
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||    
T  4835076 agaggtggtgtactcttactttg-ttgt--gttataagaggtggtgtactcttacgttgtt 4835133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 12423022 - 12422965
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| |||||||||||||||||||||||  ||||||||||||||    
T  12423022 attacatgatgttatctatgagttgttaaatgtacttgatgatagttatgttaagttg 12422965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 17052445 - 17052502
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  17052445 attacatgatgttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 17052502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 15533288 - 15533241
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  15533288 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 15533241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 36037021 - 36036974
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  36037021 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 36036974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 49549092 - 49549139
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  49549092 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 49549139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 23996966 - 23997016
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| ||||||||    
T  23996966 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgt 23997016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 30145843 - 30145805
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  30145843 gagttgttaaatgtacttgatgatggttatgttaagttg 30145805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 15223625 - 15223568
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  15223625 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 15223568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4831814 - 4831874
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| |  | | |||||||||||||||||||||||| |||||    
T  4831814 agaggtggtgtactcttacgttgttgttgttttataagaggtggtgtactcttacgttgtt 4831874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4835109 - 4835169
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| |  | | |||||||||||||||||||||||| |||||    
T  4835109 agaggtggtgtactcttacgttgttgttgttttataagaggtggtgtactcttacgttgtt 4835169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30146276 - 30146216
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    |||||| |||||||||||||||| |  | | |||||||||||||||||||||||| |||||    
T  30146276 agaggtagtgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtt 30146216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 18211673 - 18211626
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| ||||||||| |||||    
T  18211673 gttatctatgagttgttaaatgtacttgatgatggttatgttgagttg 18211626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9923152 - 9923096
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  9923152 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtt 9923096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11479870 - 11479926
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  11479870 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtt 11479926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14746956 - 14747012
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  14746956 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtt 14747012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 28385090 - 28385034
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||| ||||||||||||| ||||| | || |||||||||||||||||||||||||    
T  28385090 agaggtggagtactcttacttt-attgttt-ttctaagaggtggtgtactcttactttg 28385034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 20158447 - 20158504
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  20158447 attacatgatgatatctatgagttgttaagtgtacttgatgatgcttatgttaagttg 20158504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 20163898 - 20163955
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  20163898 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 20163955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9923087 - 9923031
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||| ||| |||| |  ||||||||||||||||||||||| ||||    
T  9923087 agaggtggtgtactcttacgttg-ttgttt--tataagaggtggtgtactcttacgttgt 9923031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11479707 - 11479757
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttac 55  Q
    ||||||||||||||||||| ||| ||||   ||||||||||||||||||||||||    
T  11479707 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttac 11479757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11479772 - 11479822
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttac 55  Q
    ||||||||||||||||||| ||| ||||   ||||||||||||||||||||||||    
T  11479772 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttac 11479822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 45220837 - 45221084
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45220837 agaggtggtgtactcttactttg-ttgt-tgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 45220934  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 199  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45220935 tagtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 45221034  T
Q  200 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45221035 cactacggggatgttaaggagaattattattgagtgtatatgatgatgtc 45221084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 33 - 249
Target Start/End: Complemental strand, 5841339 - 5841123
Alignment:
Q  33 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 132  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5841339 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 5841240  T
Q  133 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 232  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  5841239 tgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagagaatgttaaggagaattattattga 5841140  T
Q  233 gtgtatatgatgatgtc 249  Q
     ||||| ||||||||||    
T  5841139 atgtatctgatgatgtc 5841123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 2249091 - 2249338
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||    
T  2249091 agaggtggtgtactcttactttg-ttgt-tgtctatgagaggtggtgtactcttacgtggtctatgttgatgagtatgacgaggttatgatgatcttcta 2249188  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 199  Q
    ||||||||||||  |||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2249189 tagtgttgaatgtgaggttgttatgatattacatgatgttacctatgagttattaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 2249288  T
Q  200 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  2249289 cactaaggggatgttaagaagaagaattattgagtgtatatgatgatgtc 2249338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 41339 - 41156
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  41339 agagatggtgtactcttactttgattgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttat 41240  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
      |||||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41239 gatgttgaatgtggggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 41156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 16325915 - 16326098
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||    
T  16325915 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaagttatgatgatcttttat 16326014  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
      ||||||||   ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  16326015 gatgttgaatatgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgtcaagttg 16326098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 16840080 - 16840260
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||| |||||  |   |||||||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||  | |||    
T  16840080 agaggtggtgtactcttaccttgatgtt---ttataagaggtggtgtactcttacgttgtttatgttgatgattatgatgatgttatgatgattgtttat 16840176  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||  ||||||||||||| ||||||||  ||| ||| ||||||||||||||| ||||||| |||||||||||||||    
T  16840177 agtgttgaatgtgaggttgttatgatgttacatgattttatctatgagttgttaaatgtatttgatgatggttatgttaagttg 16840260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 14648275 - 14648378
Alignment:
Q  132 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 231  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  14648275 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 14648374  T
Q  232 agtg 235  Q
    ||||    
T  14648375 agtg 14648378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 184
Target Start/End: Complemental strand, 11912581 - 11912449
Alignment:
Q  52 ttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttg 151  Q
    |||| |||||||||||||||| ||||| || |||||||||||  | ||||||||||||||  ||| | || |||| |||||||| |||| ||| ||||||    
T  11912581 ttacgttgtttatgttgatgattatgatgatgttatgatgattgtttatagtgttgaatgagaggcttttttgatgttacatgatgttatctatgagttg 11912482  T
Q  152 ttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||||||| |||||||||||||||    
T  11912481 ttaaatgtacttgatgatggttatgttaagttg 11912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 14648191 - 14648280
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 91  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  14648191 agaggtggtgtactcttactttg-ttgt-tgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgaggttatgatg 14648280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 5841539 - 5841483
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5841539 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 5841483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 11912362 - 11912291
Alignment:
Q  178 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  11912362 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 11912291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 13436055 - 13435924
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||| ||| ||||  |||||||||||||||||||||| || |||||||||||| ||| |||||||| ||||||||||   | |||    
T  13436055 agaggtggtgtactcttacgttg-ttgt--gttataagaggtggtgtactctcacgttgtttatgttgttgattatgacgatgttatgatgactgtttat 13435959  T
Q  101 agtgttgaatgcaaggttgttatgatattacatga 135  Q
     |||||||||   ||||||||||||| || |||||    
T  13435958 ggtgttgaatatgaggttgttatgatgtttcatga 13435924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 51608665 - 51608736
Alignment:
Q  178 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  51608665 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 51608736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 8928709 - 8928840
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||| ||| |||   ||||| |||||||||||||||| || |||||||||||| ||| |||||||| ||||||||||  || |||    
T  8928709 agaggtggtgtactcttacgttg-ttga--gttatgagaggtggtgtactctcacgttgtttatgttgttgattatgacgatgttatgatgactttttat 8928805  T
Q  101 agtgttgaatgcaaggttgttatgatattacatga 135  Q
     | |||||||   ||||||||||||| ||||||||    
T  8928806 ggagttgaatatgaggttgttatgatgttacatga 8928840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 10834927 - 10834998
Alignment:
Q  114 aggttgttatgat-attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10834927 aggttgttatgatgattacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10834998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 16840344 - 16840399
Alignment:
Q  175 tgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattatt 230  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  16840344 tgttaagttgtcttctattcatgagtactaaggggatgttaagaagaattattatt 16840399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 4590160 - 4590217
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  4590160 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 4590217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 8491732 - 8491789
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  8491732 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 8491789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 12853363 - 12853420
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  12853363 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 14670105 - 14670048
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  14670105 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14670048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 16795582 - 16795525
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  16795582 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16795525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 17318511 - 17318566
Alignment:
Q  129 tacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  17318511 tacatgaagttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 17318566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16325881 - 16325937
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  16325881 agaggtggtgtactcttacttt-attgtct-ttctaagaggtggtgtactcttactttg 16325937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 13435897 - 13435840
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| ||||  || ||||||||||||||||||||||| |||||||||||||||    
T  13435897 attacatgatgttatatatgagttgttaaatgtacttgatgatggttatgttaagttg 13435840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8928675 - 8928733
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||    
T  8928675 agaggtggtgtactcttactttg-ttgttt-ttataagaggtggtgtactcttacgttgtt 8928733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 3802039 - 3801992
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  3802039 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 3801992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 12304243 - 12304196
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  12304243 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12304196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 14764805 - 14764852
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  14764805 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14764852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 18899522 - 18899475
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  18899522 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18899475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 20249859 - 20249906
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  20249859 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20249906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 54519666 - 54519619
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  54519666 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 54519619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5841573 - 5841517
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||||||||||||||||| ||||| |||  |||||||||||||||||||||||||    
T  5841573 agaggtggtgtactcttacttt-attgtttgtc-taagaggtggtgtactcttactttg 5841517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 14681610 - 14681572
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  14681610 gagttgttaaatgtacttgatgatggttatgttaagttg 14681572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 16840452 - 16840502
Alignment:
Q  195 atgagcactaaggggatgttaaggagaattattattgagtgtatatgatga 245  Q
    ||||| ||||||||||||||||| ||||||||||||||||| || ||||||    
T  16840452 atgagtactaaggggatgttaagaagaattattattgagtggatttgatga 16840502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 8928871 - 8928924
Alignment:
Q  131 catgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||| |||| ||| ||||||||||||||||||||||  |||||||||||||||    
T  8928871 catgatgttatctatgagttgttaaatgtacttgatggtggttatgttaagttg 8928924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 16751901 - 16751958
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  16751901 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 16751958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 18933355 - 18933408
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 180  Q
    ||||||||| |||| ||| |||||||||| |||||||||||| |||||||||||    
T  18933355 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 18933408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 30064464 - 30064411
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 180  Q
    ||||||||| |||| ||| |||||||||| |||||||||||| |||||||||||    
T  30064464 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 30064411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41440 - 41386
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||| ||||||| ||||||| || |||||||||||||||||||||||    
T  41440 agaggtggtgtacttttacttt-attgtct-ttctaagaggtggtgtactcttactt 41386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13436122 - 13436066
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||| ||| ||||  ||||||||||||||| ||||||||||||||    
T  13436122 agaggtggtgtactcttacgttg-ttgt--gttataagaggtggtatactcttactttgt 13436066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16325647 - 16325700
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttact 56  Q
    ||||||||||||||||||||    |||||| |||||||||||||||||||||||||    
T  16325647 agaggtggtgtactcttactcg--ttgtcttttataagaggtggtgtactcttact 16325700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16325814 - 16325868
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||| | ||||| || |||||||||||||||||||||||    
T  16325814 agaggtggtgtactcttacttt-actgtct-ttctaagaggtggtgtactcttactt 16325868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34852939 - 34852999
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||| ||||||||||||||| |  | | |||||||||||||||||||||||| |||||    
T  34852939 agaggtgatgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtt 34852999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 9532327 - 9532280
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| ||||||||| |||||    
T  9532327 gttatctatgagttgttaaatgtacttgatgatggttatgttgagttg 9532280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 14068062 - 14068117
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagt 182  Q
    ||||||||| |||| ||| |||||| |||||||| ||||||| |||||||||||||    
T  14068062 attacatgatgttatctaggagttgctaaatgtatttgatgatggttatgttaagt 14068117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16840012 - 16840069
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||||| |||| ||||    
T  16840012 agaggtggtgtactcttactttg-tcgtct-ttataagaggtggtgtactattaccttgt 16840069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 29545948 - 29545995
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||| ||||||||||    
T  29545948 gttatctatgagttgttaaatgtacttgatgatggttgtgttaagttg 29545995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41373 - 41317
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||||||||||||||||| ||||| | || |||||| ||||||||||||||||||    
T  41373 agaggtggtgtactcttacttt-attgt-ttttctaagagatggtgtactcttactttg 41317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41406 - 41352
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  41406 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 41352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41473 - 41419
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   |||| ||||||||||||||||||||| |||||||    
T  41473 agaggtggtgtactcttacttg--ttgt-tgttataagaggtggtgtacttttacttt 41419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5841606 - 5841552
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  5841606 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 5841552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14965884 - 14965828
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  14965884 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtt 14965828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 15463938 - 15463900
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  15463938 gagttgttaaatgtacttgatgacgtttatgttaagttg 15463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16325714 - 16325768
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  16325714 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 16325768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16325781 - 16325835
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  16325781 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 16325835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16325848 - 16325902
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  16325848 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 16325902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 19774258 - 19774220
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  19774258 gagttgttaaatgtacttgatgatgtttatgttaagttg 19774220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 23372562 - 23372600
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  23372562 gagttgttaaatgtacttgatgattgttatgttaagttg 23372600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 38312867 - 38312913
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagtt 183  Q
    |||| ||| |||| |||||||||||||||||| ||||||||||||||    
T  38312867 gttatctatgagtggttaaatgtacttgatgatggttatgttaagtt 38312913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 51299593 - 51299555
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  51299593 gagttgttaaatgtacttgatgattgttatgttaagttg 51299555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41506 - 41453
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    ||||||||||||||||||||    |||||| ||||||||||||||||||||||||||    
T  41506 agaggtggtgtactcttactcg--ttgtct-ttataagaggtggtgtactcttactt 41453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 5219926 - 5219869
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  5219926 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 5219869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 11853785 - 11853728
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  11853785 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 11853728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16325681 - 16325734
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    ||||||||||||||||||||    |||||| ||||||||||||||||||||||||||    
T  16325681 agaggtggtgtactcttactcg--ttgtct-ttataagaggtggtgtactcttactt 16325734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34852906 - 34852963
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||| ||||| ||||||||| ||||  ||||||||||||| |||||||||||||||||    
T  34852906 agaggtgatgtacgcttactttg-ttgt--gttataagaggtgatgtactcttactttgtt 34852963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 16840007 - 16840035
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  16840007 ttataagaggtggtgtactcttactttgt 16840035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 19076093 - 19075846
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19076093 agaggtgttgtactcttactttg-ttgt-tgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 19075996  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 199  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19075995 tagtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 19075896  T
Q  200 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19075895 cactaaggggatgttaaggagaattattattgaatgtatatgatgatgtc 19075846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 31253085 - 31253332
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31253085 agaggtggtgtactcttactttg-ttgt-tgtctataagaggtggtgtactcttaccttgtttatgttgatgagtatgacgaggttatgatgatcttcta 31253182  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 199  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31253183 tagtgttgaatgcgaggttgttatgatattacatgaggttacctacaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 31253282  T
Q  200 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31253283 cactaaggggatgttaaggagaattatcattgagtgtatatgatgatgtc 31253332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 33473805 - 33473988
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  33473805 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttat 33473904  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
      |||||||||   |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  33473905 gatgttgaatgtggggttgttatgatattacatgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 33473988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 36459749 - 36459570
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    |||| |||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||  | |||    
T  36459749 agagatggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtttatgttgatgattatgacgatgttatgatgattgtttat 36459654  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||  ||| |||| |||| |||||||| |||| ||| |||||||||||||||||| |||| | |||||||||||||    
T  36459653 agtgttgaatgagaggctgttttgatgttacatgatgttatctatgagttgttaaatgtacttaatgatgattatgttaagttg 36459570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 43243764 - 43243867
Alignment:
Q  132 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 231  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||     
T  43243764 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattatta 43243863  T
Q  232 agtg 235  Q
    ||||    
T  43243864 agtg 43243867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 43243680 - 43243769
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 91  Q
    |||||||| |||||||||||||| |||| ||| ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||    
T  43243680 agaggtggcgtactcttactttg-ttgt-tgtctataagaggtggtttactcttacgttgtttatgttgatgagtatgatgaggttatgatg 43243769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 36459483 - 36459412
Alignment:
Q  178 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||| || ||||||||||    
T  36459483 taagttgtcttctattcatgagtactaaggggatgttaagaaaaattattattgggtggatttgatgatgtc 36459412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 15238117 - 15238174
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  15238117 attacatgatgttatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 15238174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 22120591 - 22120648
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| |||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  22120591 attatatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22120648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10816277 - 10816217
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||| |  | | |||||||||||||||||||||||| |||||    
T  10816277 agaggtggtgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtt 10816217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33473637 - 33473691
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  33473637 agaggtggtgtactcttacttt-attgtct-ttctaagaggtggtgtactcttactt 33473691  T

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Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33473704 - 33473758
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  33473704 agaggtggtgtactcttacttt-attgtct-ttctaagaggtggtgtactcttactt 33473758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 19510531 - 19510484
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  19510531 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 19510484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 28372091 - 28372138
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  28372091 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 28372138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 37600018 - 37600065
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  37600018 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 37600065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33473771 - 33473827
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||||||||||||||||| ||||| | || |||||||||||||||||||||||||    
T  33473771 agaggtggtgtactcttacttt-attgttt-ttctaagaggtggtgtactcttactttg 33473827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 10751896 - 10751839
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  10751896 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 10751839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23538303 - 23538246
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||| |||||    
T  23538303 agaggtggtgtactcttacgttg-ttgt--gttataagaggtggtgtactcttacgttgtt 23538246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 22339081 - 22339034
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||| ||||    
T  22339081 gttatctatgagttgttaaatgtacttgatgatggttatgttacgttg 22339034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 22749230 - 22749183
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| |||| |||||||||||||||||| |||||||||||||||    
T  22749230 gttatctatgagtggttaaatgtacttgatgatggttatgttaagttg 22749183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 38146428 - 38146475
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  38146428 gttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 38146475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 41878661 - 41878708
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| |||||||||||||||||||||||  ||||||||||||||    
T  41878661 gttatctatgagttgttaaatgtacttgatgatagttatgttaagttg 41878708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6765656 - 6765599
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| |   || |||||||||||||||||||||||| |||||    
T  6765656 agaggtggtgtactcttacgttgtt---cttttataagaggtggtgtactcttacgttgtt 6765599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33473604 - 33473658
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  33473604 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 33473658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33473671 - 33473725
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  33473671 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 33473725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33473738 - 33473792
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  33473738 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 33473792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36459990 - 36459934
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  36459990 agaggtggtgtactcttacattg-ttgt---ttataagaggtggtgtactcttacattgtt 36459934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 18354876 - 18354819
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  18354876 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 18354819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 20912252 - 20912309
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| |||||||||| |||||||||||| |  ||||||||||||    
T  20912252 attacatgatgttatctatgagttgttaagtgtacttgatgatgtgtatgttaagttg 20912309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 22108449 - 22108490
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatga 168  Q
    ||||||||| |||| ||| |||||||||||||||||||||||    
T  22108449 attacatgatgttatctatgagttgttaaatgtacttgatga 22108490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31252953 - 31253003
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttac 55  Q
    ||||||||||||||||||| ||| ||||   ||||||||||||||||||||||||    
T  31252953 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttac 31253003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 36459824 - 36459796
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  36459824 ttataagaggtggtgtactcttactttgt 36459796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 44494098 - 44494345
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44494098 agaggtggtgtgctcttactttg-ttgt-tgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttcta 44494195  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 199  Q
    ||||||||||||  |||||||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44494196 tagtgttgaatgtgaggttgttatgatattacatgatgttacctatgaattgttaaatgtacttgatgatggttatgttaagttgtcttctattcatgag 44494295  T
Q  200 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||    
T  44494296 cactaaggggatgttaagaataattattattgagtgtatatgatgatgtc 44494345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 21967867 - 21968122
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||| ||||   ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  21967867 agaggtggtgtactcttactttg-ttgttgtttataagaggtggtgtaatcttacattgtttatgttgatgagtatgacgaggttatgatgatcttttat 21967965  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt--------taagttgtcttctat 192  Q
    || ||||||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||    
T  21967966 agggttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctat 21968065  T
Q  193 tcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21968066 tcatgagcactaaggggatgttaagaagaattattattgagtgtatatgatgatgtc 21968122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 21980707 - 21980962
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||| ||||   |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||    
T  21980707 agaggtggtgtactcttactttg-ttgttgtttataagaggtggtgtactcttacattgtttatgttgatgagtatgacgaggttatgatgattttttat 21980805  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt--------taagttgtcttctat 192  Q
    || ||||||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||    
T  21980806 agggttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctat 21980905  T
Q  193 tcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21980906 tcatgagcactaaggggatgttaagaagaattattattgagtgtatatgatgatgtc 21980962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 21985690 - 21985945
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||| ||||   |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||    
T  21985690 agaggtggtgtactcttactttg-ttgttgtttataagaggtggtgtactcttacattgtttatgttgatgagtatgacgaggttatgatgatattttat 21985788  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt--------taagttgtcttctat 192  Q
    || ||||||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||    
T  21985789 agggttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctat 21985888  T
Q  193 tcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21985889 tcatgagcactaaggggatgttaagaagaattattattgagtgtatatgatgatgtc 21985945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 22009071 - 22009326
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||| ||||    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  22009071 agaggtggtgtactcttactttg-ttgttatctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttat 22009169  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt--------taagttgtcttctat 192  Q
    || ||||||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        |||||||| ||||||    
T  22009170 agggttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtgttctat 22009269  T
Q  193 tcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  22009270 tcatgagcactaaggggatgttaagaagaattattattaagtgtatatgatgatgtc 22009326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 11774501 - 11774318
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  11774501 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttat 11774402  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
      |||||||||   |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  11774401 gatgttgaatgtggggttgttatgatattacatgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 11774318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 11251962 - 11252204
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    |||||||||||||||||||  || |||| ||| ||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  11251962 agaggtggtgtactcttaccctg-ttgt-tgtctatgagaggtggtgtactcttacgtggtttatgttgatgagtatgacgaggttatgatgatcttcta 11252059  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctatt-catga 198  Q
    ||||||||||||  |||| ||||||||||     || |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  11252060 tagtgttgaatgtgaggtggttatgatat-----gatgttacctatgagttgttaaatgtacttgatgagg-ttatgttaagttgtcttctatttcatga 11252153  T
Q  199 gcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11252154 gcactaaggggatgttaagaagaattattattgagtgtatatgatgatgtc 11252204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 34950290 - 34950043
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  34950290 agaggtggtgtactctttcttt-attgt-tgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttata 34950193  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 199  Q
    ||||||||||||  |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||  || | |||  || | || | ||||||||    
T  34950192 tagtgttgaatgtgaggttgttctgatattacatgatgttacctatgagttgttaaatgtacttgatgagtttttttttattttttttttttttcatgag 34950093  T
Q  200 cactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  34950092 cactaatgggatgttaagaagaattattattgagtgtatatgatgatgtc 34950043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 8414850 - 8415033
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  8414850 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttat 8414949  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
      |||| ||||   |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||    
T  8414950 gatgttaaatgtggggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgattagggttattttaagttg 8415033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 22000658 - 22000873
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||| ||||   |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||    
T  22000658 agaggtggtgtactcttactttg-ttgttgtttataagaggtggtgtactcttacattgtttatgttgatgagtatgactaggttatgatgatcttttat 22000756  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt--------taagttgtcttctat 192  Q
    |     | |||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||    
T  22000757 a-----ggatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctat 22000851  T
Q  193 tcatgagcactaaggggatgtt 214  Q
    ||||||||||||||||||||||    
T  22000852 tcatgagcactaaggggatgtt 22000873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 21328768 - 21328588
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||| | || |  ||||||||||||||||||||||| || ||||||||||||| |||||||| |||||||||||  | |||    
T  21328768 agaggtggtgtactcttactttg-tcgttt--tataagaggtggtgtactcttacgttttttatgttgatgattatgacgatgttatgatgattgtttat 21328672  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||  ||||||||||||| |||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  21328671 agtgttgaatgtgaggttgttatgatgttacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 21328588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 42560786 - 42560938
Alignment:
Q  32 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattac 131  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||  | ||||||||||||||  ||| |||| |||| ||||    
T  42560786 ttataagaggtggtgtactcttacgttgtttatgttgatgattatgacgatgctatgatgattgtttatagtgttgaatgagaggctgttttgatgttac 42560885  T
Q  132 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| |||| ||| |||||||||||||||| |||||  |||||||||||||||    
T  42560886 atgatgttatctatgagttgttaaatgtacgtgatggtggttatgttaagttg 42560938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 42561025 - 42561096
Alignment:
Q  178 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  42561025 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 42561096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 21386238 - 21386181
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  21386238 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 21386181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21328836 - 21328779
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||    
T  21328836 agaggtggtgtactcttactttg-tcgtct-ttataagaggtggtgtactcttactttgt 21328779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 23427905 - 23427848
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| |||||||||||||||||| |||| |||||||||||||||    
T  23427905 attacatgatgttatctatgagttgttaaatgtacttaatgatggttatgttaagttg 23427848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 23913344 - 23913287
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| |||  |||||||||||||||||||||| |||||||||||||||    
T  23913344 attacatgatgttatctataagttgttaaatgtacttgatgatggttatgttaagttg 23913287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11774602 - 11774548
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  11774602 agaggtggtgtactcttacttt-attgtct-ttctaagaggtggtgtactcttactt 11774548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22000557 - 22000611
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  22000557 agaggtggtgtactcttactttg-tcgtct-ttataagaggtggtgtactcttactt 22000611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22005536 - 22005590
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  22005536 agaggtggtgtactcttactttg-tcgtct-ttataagaggtggtgtactcttactt 22005590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16197751 - 16197694
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||||||| | || | |||||||||||||||||||||||||||||    
T  16197751 agaggtggtgtactcttactttg-tcgttt-ttataagaggtggtgtactcttactttgt 16197694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21328802 - 21328745
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||||||| | || | |||||||||||||||||||||||||||||    
T  21328802 agaggtggtgtactcttactttg-tcgttt-ttataagaggtggtgtactcttactttgt 21328745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 22003050 - 22003089
Alignment:
Q  210 atgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  22003050 atgttaagaagaattattattgagtgtatatgatgatgtc 22003089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8414816 - 8414872
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||||||||||||||||| ||||| | || |||||||||||||||||||||||||    
T  8414816 agaggtggtgtactcttacttt-attgttt-ttctaagaggtggtgtactcttactttg 8414872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11774535 - 11774479
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||||||||||||||||| ||||| | || |||||||||||||||||||||||||    
T  11774535 agaggtggtgtactcttacttt-attgttt-ttctaagaggtggtgtactcttactttg 11774479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 44385833 - 44385886
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 180  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||||    
T  44385833 attacatgatgttatctatgagttgttaaatgtacttgatgatgattatgttaa 44385886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21967833 - 21967891
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||| |||||||||||||||| || || | ||||||||||||||||||||||||||||||    
T  21967833 agaggaggtgtactcttacttt-atcgttt-ttataagaggtggtgtactcttactttgtt 21967891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21980606 - 21980660
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||| || || | ||||||||||||||||||||||||||    
T  21980606 agaggtggtgtactcttacttt-atcgttt-ttataagaggtggtgtactcttactt 21980660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21980673 - 21980731
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||| |||||||||||||||| || || | ||||||||||||||||||||||||||||||    
T  21980673 agaggaggtgtactcttacttt-atcgttt-ttataagaggtggtgtactcttactttgtt 21980731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21985589 - 21985643
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||| || || | ||||||||||||||||||||||||||    
T  21985589 agaggtggtgtactcttacttt-atcgttt-ttataagaggtggtgtactcttactt 21985643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21985656 - 21985714
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||| |||||||||||||||| || || | ||||||||||||||||||||||||||||||    
T  21985656 agaggaggtgtactcttacttt-atcgttt-ttataagaggtggtgtactcttactttgtt 21985714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22000624 - 22000682
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||| |||||||||||||||| || || | ||||||||||||||||||||||||||||||    
T  22000624 agaggaggtgtactcttacttt-atcgttt-ttataagaggtggtgtactcttactttgtt 22000682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22009037 - 22009095
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||| |||||||||||||||| || || | ||||||||||||||||||||||||||||||    
T  22009037 agaggaggtgtactcttacttt-atcgttt-ttataagaggtggtgtactcttactttgtt 22009095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8414783 - 8414837
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  8414783 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 8414837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11774568 - 11774514
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  11774568 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 11774514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11774635 - 11774581
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  11774635 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 11774581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22352592 - 22352536
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  22352592 agaggtggtgtactcttacattg-ttgt---ttataagaggtggtgtactcttacgttgtt 22352536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8414750 - 8414803
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    ||||||||||||||||||||    |||||| ||||||||||||||||||||||||||    
T  8414750 agaggtggtgtactcttactcg--ttgtct-ttataagaggtggtgtactcttactt 8414803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11774668 - 11774615
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    ||||||||||||||||||||    |||||| ||||||||||||||||||||||||||    
T  11774668 agaggtggtgtactcttactcg--ttgtct-ttataagaggtggtgtactcttactt 11774615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 14399092 - 14399149
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  14399092 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 14399149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18024729 - 18024786
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| |||| |  ||||||||||||||||||||||| |||||    
T  18024729 agaggtggtgtactcttacgttg-ttgttt--tataagaggtggtgtactcttacgttgtt 18024786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 21409980 - 21409927
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 180  Q
    ||||||||| | || ||| |||||||||| |||||||||||| |||||||||||    
T  21409980 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgttaa 21409927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 21804472 - 21804419
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 180  Q
    ||||||||| | || ||| |||||||||| |||||||||||| |||||||||||    
T  21804472 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgttaa 21804419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 27942704 - 27942741
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagtt 183  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  27942704 gagttgttaaatgtacttgatgatggttatgataagtt 27942741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42560625 - 42560676
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttact 56  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||||    
T  42560625 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttact 42560676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 16197756 - 16197728
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  16197756 ttataagaggtggtgtactcttactttgt 16197728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 21328841 - 21328813
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  21328841 ttataagaggtggtgtactcttactttgt 21328813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 21980534 - 21980562
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  21980534 ttataagaggtggtgtactcttactttgt 21980562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 21985517 - 21985545
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  21985517 ttataagaggtggtgtactcttactttgt 21985545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 22000552 - 22000580
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  22000552 ttataagaggtggtgtactcttactttgt 22000580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 22005531 - 22005559
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  22005531 ttataagaggtggtgtactcttactttgt 22005559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 33 - 249
Target Start/End: Original strand, 11394784 - 11395000
Alignment:
Q  33 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 132  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11394784 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 11394883  T
Q  133 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 232  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  11394884 tgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagagaatgttaaggagaattattattga 11394983  T
Q  233 gtgtatatgatgatgtc 249  Q
     ||||| ||||||||||    
T  11394984 atgtatctgatgatgtc 11395000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 16185728 - 16185474
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||| ||||||||||||| |||| ||| ||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  16185728 agaggtggtatactcttactttg-ttgt-tgtctatgagaggtggtgtactcttacgttggttatgttgatgagtatgacgaggttatgatgatcttcta 16185631  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagtt--------gtcttcta 191  Q
    ||||||||||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||        ||||||||    
T  16185630 tagtgttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggtcatgttaagttgataagtcgtcttcta 16185531  T
Q  192 ttcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgt 248  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  16185530 ttcatgagcactaaggggatgttaagaagaattaatattgagtgtatatgatgatgt 16185474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 41283850 - 41283667
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  41283850 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttat 41283751  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
      |||||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41283750 gatgttgaatgtggggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 41283667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 15213249 - 15213070
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    |||| |||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||  | |||    
T  15213249 agagatggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtttatgttgatgattatcacgatgttatgatgattgtttat 15213154  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||  ||| |||| |||| |||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||    
T  15213153 agtgttgaatgagaggctgttttgatgttacatgatgttatccatgagttgttaaatgtacttgatgatggttatgttaagttg 15213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 18301430 - 18301357
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagc 200  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18301430 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttgtcttctattcatgagc 18301357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11394584 - 11394640
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11394584 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 11394640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 15212983 - 15212912
Alignment:
Q  178 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||| || ||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  15212983 taagttgtcctcaattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 15212912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 10607320 - 10607377
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10607320 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10607377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 11660361 - 11660304
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  11660361 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 11660304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 13891709 - 13891652
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  13891709 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13891652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 13892092 - 13892035
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  13892092 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13892035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 20486821 - 20486764
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  20486821 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20486764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 39268313 - 39268370
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  39268313 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 39268370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 7520215 - 7520272
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  7520215 attacatgatgttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 7520272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 9752507 - 9752564
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||| ||| |||||||||||||||    
T  9752507 attacatgatgttatctatgagttgttaaatgtacttggtgatggttatgttaagttg 9752564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 25928371 - 25928428
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| |||||||||||||||||| |||| |||||||||||||||    
T  25928371 attacatgatgttatctatgagttgttaaatgtactttatgatggttatgttaagttg 25928428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 146569 - 146522
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  146569 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 146522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 833606 - 833673
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttg 68  Q
    ||||||||||||||||||||||| |  | | |||||| |||||||||||||| || ||||||||||||    
T  833606 agaggtggtgtactcttactttgttgttgttttataaaaggtggtgtactctcacgttgtttatgttg 833673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1198786 - 1198853
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttg 68  Q
    ||||||||||||||||||||||| |  | | |||||| |||||||||||||| || ||||||||||||    
T  1198786 agaggtggtgtactcttactttgttgttgttttataaaaggtggtgtactctcacgttgtttatgttg 1198853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 14420856 - 14420809
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  14420856 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14420809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 16005073 - 16005026
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  16005073 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16005026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 18606407 - 18606360
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  18606407 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18606360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 18871366 - 18871319
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  18871366 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18871319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 838152 - 838190
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  838152 gagttgttaaatgtacttgatgatggttatgttaagttg 838190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 1203332 - 1203370
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  1203332 gagttgttaaatgtacttgatgatggttatgttaagttg 1203370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11394550 - 11394606
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||||||||||||||||| ||||| ||| | ||||||||||||||||||||||||    
T  11394550 agaggtggtgtactcttacttt-attgtttgtca-aagaggtggtgtactcttactttg 11394606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 16109994 - 16110032
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16109994 gagttgttaaatgtacttgatgatggttatgttaagttg 16110032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34957182 - 34957122
Alignment:
Q  1 agaggtggtgtactcttactttgattgtc--tgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||||||| | |||  | |||||||||||||||||||||||||||||    
T  34957182 agaggtggtgtactcttactttg-tcgtcgtttttataagaggtggtgtactcttactttgt 34957122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41283884 - 41283828
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||||||||||||||||| ||||| | || |||||||||||||||||||||||||    
T  41283884 agaggtggtgtactcttacttt-attgttt-ttctaagaggtggtgtactcttactttg 41283828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 837602 - 837659
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||| |||||    
T  837602 agaggtggtgtactcttactttg-ttgt--gttataagaggtgatgtactcttacgttgtt 837659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1202782 - 1202839
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||| |||||    
T  1202782 agaggtggtgtactcttactttg-ttgt--gttataagaggtgatgtactcttacgttgtt 1202839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10501774 - 10501831
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||||  ||||||||||||||||||||||| |||||    
T  10501774 agaggtggtgtactcttacgttg-ttgtct--tataagaggtggtgtactcttacgttgtt 10501831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15213421 - 15213364
Alignment:
Q  1 agaggtggtgtactcttactttgat-tgtctgttataagaggtggtgtactcttactt 57  Q
    ||||||||||||||||||||||| | | | | ||||||||||||||||||||||||||    
T  15213421 agaggtggtgtactcttactttgttgttttttttataagaggtggtgtactcttactt 15213364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 16582500 - 16582443
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| ||||  || ||||||||||||||||||||||| ||||||| |||||||    
T  16582500 attacatgatgttatttatgagttgttaaatgtacttgatgatggttatgataagttg 16582443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 18424314 - 18424257
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  18424314 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 18424257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 26291236 - 26291183
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 180  Q
    ||||||||| |||| ||| |||||||||| |||||||||||| |||||||||||    
T  26291236 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 26291183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34957112 - 34957055
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||| |||||    
T  34957112 agaggtggtgtactcttacgttg-ttgt--gttataagaggtggtgtactcttacgttgtt 34957055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 39721275 - 39721222
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 180  Q
    ||||||||| | || ||| ||||||||||||||||||||||| |||||||||||    
T  39721275 attacatgatgatatctatgagttgttaaatgtacttgatgatggttatgttaa 39721222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10501645 - 10501701
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||| ||| ||||||  ||||||||||||||||||||||| ||||    
T  10501645 agaggtggtgtactcttacgttg-ttgtct--tataagaggtggtgtactcttacgttgt 10501701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16251782 - 16251838
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||   |||| | |||||||||||||||||||||||||||||    
T  16251782 agaggtggtgtactcttacttg--ttgttt-ttataagaggtggtgtactcttactttgt 16251838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16323791 - 16323735
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||| ||| ||||||  ||||||||||||||||||||||| ||||    
T  16323791 agaggtggtgtactcttacgttg-ttgtct--tataagaggtggtgtactcttacgttgt 16323735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29003832 - 29003776
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||  ||| |||  |||||||||||||||||||||||||||||||    
T  29003832 agaggtggtgtactcttatgttg-ttg--tgttataagaggtggtgtactcttactttgt 29003776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34957215 - 34957159
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||||    
T  34957215 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttactttgt 34957159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 10897906 - 10897953
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| |||| |||||||||||||||||| |||||||||||||||    
T  10897906 gttatctatgagtcgttaaatgtacttgatgatggttatgttaagttg 10897953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 1860040 - 1860078
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  1860040 gagttgttaaatgtacttgatgacgtttatgttaagttg 1860078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10501613 - 10501669
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  10501613 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtt 10501669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11092627 - 11092571
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  11092627 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtt 11092571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11394517 - 11394571
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  11394517 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 11394571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12556836 - 12556780
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  12556836 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtt 12556780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 13919431 - 13919469
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  13919431 gagttgttaaatgtacttgatgacgtttatgttaagttg 13919469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16323823 - 16323767
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  16323823 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtt 16323767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41283917 - 41283863
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  41283917 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 41283863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 2833481 - 2833538
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  2833481 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 2833538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10501807 - 10501864
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| |||| |  ||||||||||||||||||||||| |||||    
T  10501807 agaggtggtgtactcttacgttg-ttgttt--tataagaggtggtgtactcttacgttgtt 10501864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 15083305 - 15083252
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 180  Q
    ||||||||| | || ||| |||||||||| |||||||||||| |||||||||||    
T  15083305 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgttaa 15083252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15116288 - 15116231
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| |||| |  ||||||||||||||||||||||| |||||    
T  15116288 agaggtggtgtactcttacgttg-ttgttt--tataagaggtggtgtactcttacgttgtt 15116231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 61
Target Start/End: Complemental strand, 15213426 - 15213397
Alignment:
Q  32 ttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||||||||||    
T  15213426 ttataagaggtggtgtactcttactttgtt 15213397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41283950 - 41283897
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    ||||||||||||||||||||    |||||| ||||||||||||||||||||||||||    
T  41283950 agaggtggtgtactcttactcg--ttgtct-ttataagaggtggtgtactcttactt 41283897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 837635 - 837699
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttg 68  Q
    ||||||| ||||||||||| ||| ||||  ||||| |||||||||||||||| || ||||||||||||    
T  837635 agaggtgatgtactcttacgttg-ttgt--gttatgagaggtggtgtactctcacgttgtttatgttg 837699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1202815 - 1202879
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttg 68  Q
    ||||||| ||||||||||| ||| ||||  ||||| |||||||||||||||| || ||||||||||||    
T  1202815 agaggtgatgtactcttacgttg-ttgt--gttatgagaggtggtgtactctcacgttgtttatgttg 1202879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9320747 - 9320797
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttac 55  Q
    ||||||||||||||||||| || |||||   ||||||||||||||||||||||||    
T  9320747 agaggtggtgtactcttacgtt-attgt---ttataagaggtggtgtactcttac 9320797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10501873 - 10501929
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||| ||| ||||||  ||||||||||||| ||||||||| ||||    
T  10501873 agaggtggtgtactcttacgttg-ttgtct--tataagaggtggtatactcttacgttgt 10501929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 11092595 - 11092539
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||| ||| |||| |  ||||||||||||||||||||||| ||||    
T  11092595 agaggtggtgtactcttacgttg-ttgttt--tataagaggtggtgtactcttacgttgt 11092539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15112682 - 15112632
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttac 55  Q
    ||||||||||||||||||| ||| ||||   ||||||||||||||||||||||||    
T  15112682 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttac 15112632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 15213356 - 15213328
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  15213356 ttataagaggtggtgtactcttactttgt 15213328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16185860 - 16185810
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttac 55  Q
    ||||||||||||||||||| ||| ||||   ||||||||||||||||||||||||    
T  16185860 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttac 16185810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 16251547 - 16251575
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  16251547 ttataagaggtggtgtactcttactttgt 16251575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 16251744 - 16251772
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  16251744 ttataagaggtggtgtactcttactttgt 16251772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 16251909 - 16251969
Alignment:
Q  31 gttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 91  Q
    ||||| |||||||||||||||| || |||||||||||| ||| ||||| |  |||||||||    
T  16251909 gttatgagaggtggtgtactctcacgttgtttatgttgttgaatatgaggttgttatgatg 16251969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 33 - 249
Target Start/End: Complemental strand, 28708032 - 28707816
Alignment:
Q  33 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 132  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28708032 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 28707933  T
Q  133 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 232  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  28707932 tgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagagaatgttaaggagaattattattga 28707833  T
Q  233 gtgtatatgatgatgtc 249  Q
     ||||| ||||||||||    
T  28707832 atgtatctgatgatgtc 28707816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 9622788 - 9623032
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||||||||||| ||| |||| ||| ||| ||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||  ||||    
T  9622788 agaggtggtgtactcttaccttg-ttgt-tgtctatgagaggtggtgtactcttacgtggtttatgttgatgagtatgacgagcttatgatgattctcta 9622885  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 199  Q
    || |||||||||  |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  9622886 taatgttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaa-tgtacttgatgagggttatgtaaagttgtcttctattcatgag 9622984  T
Q  200 cactaaggggatgttaaggagaattattattgagtgtatatgatgatg 247  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  9622985 cactaaggggatgttaagaagaattattattgagtgtatatgatgatg 9623032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 23955574 - 23955391
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  23955574 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttat 23955475  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
      |||||||||   |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  23955474 gatgttgaatgtggggttgttatgatattacatgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 23955391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 34297650 - 34297829
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    |||| |||||||||||||| ||| ||||   ||||||||||||| |||||||||| |||||||||||||||| |||||||| |||||||||||  | |||    
T  34297650 agagatggtgtactcttacgttg-ttgt---ttataagaggtggcgtactcttacgttgtttatgttgatgattatgacgatgttatgatgattgtttat 34297745  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||| |||| |||| |||| |||||||| |||| ||| ||||||||||||||||||| ||| |||||||||||||||    
T  34297746 agtgttgaatgaaaggctgttttgatgttacatgatgttatctatgagttgttaaatgtacttgctgatggttatgttaagttg 34297829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 14594666 - 14594769
Alignment:
Q  132 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 231  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  14594666 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 14594765  T
Q  232 agtg 235  Q
    ||||    
T  14594766 agtg 14594769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 7429496 - 7429398
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtg 235  Q
    |||||||| ||||||||||||||||| || | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  7429496 gttacctatgagttgttaaatgtactcgaggggggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattgagtg 7429398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 25738066 - 25737914
Alignment:
Q  32 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattac 131  Q
    ||||||||| || ||||||||||| ||| |||||||||||| ||||||||||||||||||||  | ||||||||||| ||  ||||| ||||||| ||||    
T  25738066 ttataagagatgatgtactcttacgttggttatgttgatgattatgacgaggttatgatgattgtttatagtgttgagtgtgaggtttttatgatgttac 25737967  T
Q  132 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| |||| ||| |||||| |||||||||||||||| | ||||| |||||||    
T  25737966 atgatgttatctatgagttggtaaatgtacttgatgatgattatgctaagttg 25737914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28708232 - 28708176
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28708232 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 28708176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7429585 - 7429499
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatg 88  Q
    |||||||| |||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  7429585 agaggtggcgtactcttactttg-ttgt-tgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgaggttatg 7429499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 1254090 - 1254019
Alignment:
Q  178 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  1254090 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 1254019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 14594582 - 14594671
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgtt-ataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 91  Q
    ||||||||||||||||||||||| |||| |||  |||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  14594582 agaggtggtgtactcttactttg-ttgt-tgtccataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgagggtatgatg 14594671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 34297916 - 34297987
Alignment:
Q  178 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||| || ||||||||||    
T  34297916 taagttgtcttctattcatgagtactaaggcgatgttaagaagaattattattgggtggatttgatgatgtc 34297987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 18918580 - 18918637
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  18918580 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 18918637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 25737830 - 25737775
Alignment:
Q  175 tgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattatt 230  Q
    |||||||||||||||||||||||||  |||||||||||||| | ||||||||||||    
T  25737830 tgttaagttgtcttctattcatgagggctaaggggatgttatgaagaattattatt 25737775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 23400757 - 23400704
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 180  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||    
T  23400757 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaa 23400704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 23538060 - 23538003
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||  ||| ||||||||||||||||||||||| |||||||||||||||    
T  23538060 attacatgatgttgtctatgagttgttaaatgtacttgatgatggttatgttaagttg 23538003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23955675 - 23955621
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  23955675 agaggtggtgtactcttacttt-attgtct-ttctaagaggtggtgtactcttactt 23955621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23955742 - 23955688
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  23955742 agaggtggtgtactcttacttt-attgtct-ttctaagaggtggtgtactcttactt 23955688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 12941290 - 12941243
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  12941290 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12941243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 27222901 - 27222854
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  27222901 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 27222854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 1254219 - 1254181
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  1254219 gagttgttaaatgtacttgatgatggttatgttaagttg 1254181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 23955608 - 23955552
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||||||||||||||||| ||||| | || |||||||||||||||||||||||||    
T  23955608 agaggtggtgtactcttacttt-attgttt-ttctaagaggtggtgtactcttactttg 23955552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 28708266 - 28708210
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||||||||||||||||| ||||| |||  |||||||||||||||||||||||||    
T  28708266 agaggtggtgtactcttacttt-attgtttgtc-taagaggtggtgtactcttactttg 28708210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29417150 - 29417200
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactctta 54  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  29417150 agaggtggtgtactcttactttg-ttgt--gttataagaggtggtgtactctta 29417200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 2076365 - 2076308
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||| ||||||| | |||||||||||||    
T  2076365 attacatgatgttatctatgagttgttaaatgtatttgatgatgattatgttaagttg 2076308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 28290914 - 28290951
Alignment:
Q  147 agttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||||||||||||| |||||||||||||||    
T  28290914 agttgttaaatgtacttgatgatggttatgttaagttg 28290951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 18953483 - 18953538
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagt 182  Q
    ||||||||| || | ||| ||||||||||||||||||||||| | |||||||||||    
T  18953483 attacatgatgtcatctaggagttgttaaatgtacttgatgatgattatgttaagt 18953538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 4475855 - 4475817
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  4475855 gagttgttaaatgtacttgatgattgttatgttaagttg 4475817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18927679 - 18927623
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  18927679 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtt 18927623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19953283 - 19953339
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  19953283 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtt 19953339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23955641 - 23955587
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  23955641 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 23955587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23955708 - 23955654
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  23955708 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 23955654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23955775 - 23955721
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    ||||||||||||||||||||    |||||| |||||||||||||||||||||||||||    
T  23955775 agaggtggtgtactcttactcg--ttgtct-ttataagaggtggtgtactcttacttt 23955721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28708299 - 28708245
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  28708299 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 28708245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 16622914 - 16622857
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||  ||| ||| || |||||||||||||||||||| | |||||||||||||    
T  16622914 attacatgatattatctatgaattgttaaatgtacttgatgatgtttatgttaagttg 16622857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16885564 - 16885621
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| |||| |  ||||||||||||||||||||||| |||||    
T  16885564 agaggtggtgtactcttacgttg-ttgttt--tataagaggtggtgtactcttacgttgtt 16885621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 61
Target Start/End: Complemental strand, 25738197 - 25738168
Alignment:
Q  32 ttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||||||||||    
T  25738197 ttataagaggtggtgtactcttactttgtt 25738168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 27555618 - 27555561
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  27555618 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 27555561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 31479462 - 31479519
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||  ||| ||| ||||||||||||||| ||||||| | |||||||||||||    
T  31479462 attacatgatattatctatgagttgttaaatgtatttgatgatgtttatgttaagttg 31479519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18927549 - 18927493
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||| ||| |||| |  ||||||||||||||||||||||| ||||    
T  18927549 agaggtggtgtactcttacgttg-ttgttt--tataagaggtggtgtactcttacgttgt 18927493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18927647 - 18927597
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttac 55  Q
    ||||||||||||||||||| ||| ||||   ||||||||||||||||||||||||    
T  18927647 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttac 18927597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19953348 - 19953404
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||| ||| | ||||  ||||||||||||||||||||||| ||||    
T  19953348 agaggtggtgtactcttacgttg-tcgtct--tataagaggtggtgtactcttacgttgt 19953404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20182517 - 20182460
Alignment:
Q  1 agaggtggtgtactcttactttgattgtc-tgttataagaggtggtgtactcttactttgtt 61  Q
    |||||||||||||||||||    |||||| || ||||||||||||||||||||||| |||||    
T  20182517 agaggtggtgtactcttac----attgtcgtgctataagaggtggtgtactcttacgttgtt 20182460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22153474 - 22153531
Alignment:
Q  1 agaggtggtgtactcttactttgattgtc-tgttataagaggtggtgtactcttactttgtt 61  Q
    |||||||||||||||||||    |||||| || ||||||||||||||||||||||| |||||    
T  22153474 agaggtggtgtactcttac----attgtcgtgctataagaggtggtgtactcttacgttgtt 22153531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 34297329 - 34297357
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  34297329 ttataagaggtggtgtactcttactttgt 34297357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 34297400 - 34297428
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  34297400 ttataagaggtggtgtactcttactttgt 34297428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 34297505 - 34297533
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  34297505 ttataagaggtggtgtactcttactttgt 34297533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 34297574 - 34297602
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  34297574 ttataagaggtggtgtactcttactttgt 34297602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 168; Significance: 4e-90; HSPs: 2)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 214 - 1
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||||||||||||||| |||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  214 agaggtggtgtactcttactttg-ttgt-tgtctttaagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 117  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgag 199  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  116 tagtgttgaatgcgaggttgttatgatattacatgaggttacctttgagttgttaaatgtacttgatgagggttatgttaagctgtcttctattcatgag 17  T
Q  200 cactaaggggatgtta 215  Q
    |||||||| |||||||    
T  16 cactaaggagatgtta 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 314 - 257
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| |  || |||| |||||||||||||||||||||||| |||||    
T  314 agaggtggtgtactcttacgt--atcgtct-ttataagaggtggtgtactcttacgttgtt 257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 143; Significance: 3e-75; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 173133 - 173338
Alignment:
Q  35 taagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattacatg 134  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||    
T  173133 taagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatagtgttgaatgtgaggttgttatgatattatatg 173232  T
Q  135 aggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagt 234  Q
    | ||||||||  ||||||||||||||||||||||||||||||||||         || ||||||||||||||||||||||||| ||||||||||||||||    
T  173233 atgttacctattagttgttaaatgtacttgatgagggttatgttaa---------tactcatgagcactaaggggatgttaagaagaattattattgagt 173323  T
Q  235 gtatatgatgatgtc 249  Q
    |||||||||||||||    
T  173324 gtatatgatgatgtc 173338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 173071 - 173131
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgttt 62  Q
    ||||||||||||||||||||||| ||||   ||||||||||||| | |||||||| ||||||    
T  173071 agaggtggtgtactcttactttg-ttgttgtttataagaggtggggcactcttacgttgttt 173131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 172865 - 172893
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  172865 ttataagaggtggtgtactcttactttgt 172893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 133; Significance: 3e-69; HSPs: 4)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 3171 - 3315
Alignment:
Q  33 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 132  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3171 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 3270  T
Q  133 tgaggttacctacgagttgttaaatgtacttgatgagggttatgt 177  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  3271 tgaggttacctatgagttgttaaatgtacttgatgagggttatgt 3315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2971 - 3027
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2971 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 3027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2937 - 2993
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||||||||||||||||| ||||| |||  |||||||||||||||||||||||||    
T  2937 agaggtggtgtactcttacttt-attgtttgtc-taagaggtggtgtactcttactttg 2993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2904 - 2958
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  2904 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 2958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 3e-69; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 37379240 - 37379058
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttcta 99  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37379240 agaggtggtgtactcttactttg-ttgt-tgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatctttta 37379143  T
Q  100 tagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |  |||||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37379142 tgatgttgaatgtggggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 37379058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22702940 - 22702873
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttg 68  Q
    ||||||||||||||||||||||| |  | | |||||||||||||||||||||||| ||||||||||||    
T  22702940 agaggtggtgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtttatgttg 22702873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22702973 - 22702916
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  22702973 agaggtggtgtactcttactttg-ttgt--gttataagaggtggtgtactcttactttgtt 22702916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 21074510 - 21074564
Alignment:
Q  130 acatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  21074510 acatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 21074564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 9784073 - 9784016
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| |||||||| |||||||||||||| |||||||||||||||    
T  9784073 attacatgatgttatctatgagttgtttaatgtacttgatgatggttatgttaagttg 9784016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 6481853 - 6481806
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  6481853 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 6481806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 6485320 - 6485273
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  6485320 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 6485273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 9240743 - 9240696
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  9240743 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 9240696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 19663567 - 19663614
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  19663567 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 19663614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 20260326 - 20260279
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  20260326 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20260279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18359172 - 18359229
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| |||| |  |||||||||||||||||||||||||||||    
T  18359172 agaggtggtgtactcttacgttg-ttgttt--tataagaggtggtgtactcttactttgtt 18359229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34874617 - 34874673
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||| ||| |||| |  ||||||||||||||||||||||| ||||    
T  34874617 agaggtggtgtactcttacgttg-ttgttt--tataagaggtggtgtactcttacgttgt 34874673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 116; Significance: 4e-59; HSPs: 12)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 175571 - 175428
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  175571 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacattgtttatgttgatgagtatgacgaggttatgatgatcttttat 175472  T
Q  101 agtgttgaatgcaaggttgttatgatattacatgaggttaccta 144  Q
      |||||||||   ||||||||||||||||||||||||||||||    
T  175471 gatgttgaatgtggggttgttatgatattacatgaggttaccta 175428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 163708 - 163782
Alignment:
Q  175 tgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  163708 tgttaagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgagtggatttgatgatgtc 163782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 163476 - 163594
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||||||| | || |  ||||||||||||||||||||||| |||||||||||||||| |||||||| ||| ||| |||  | |||    
T  163476 agaggtggtgtactcttactttg-tcgttt--tataagaggtggtgtactcttacgttgtttatgttgatgattatgacgatgttgtgacgattgtttat 163572  T
Q  101 agtgttgaatgcaaggttgtta 122  Q
    |||||||||||  |||||||||    
T  163573 agtgttgaatgtgaggttgtta 163594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 153654 - 153785
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||| ||| |||   ||||| |||||||||||||||| || |||||||||||| | | |||||||| ||||||||||   | |||    
T  153654 agaggtggtgtactcttacgttg-ttga--gttatgagaggtggtgtactctcacgttgtttatgttgtttattatgacgatgttatgatgactgtttat 153750  T
Q  101 agtgttgaatgcaaggttgttatgatattacatga 135  Q
     |||||||||   ||||||||||||| ||||||||    
T  153751 ggtgttgaatatgaggttgttatgatgttacatga 153785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 163588 - 163624
Alignment:
Q  148 gttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||||||||||||||||||||||||||||    
T  163588 gttgttaaatgtacttgatgagggttatgttaagttg 163624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 175672 - 175618
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactt 57  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  175672 agaggtggtgtactcttacttt-attgtct-ttctaagaggtggtgtactcttactt 175618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 175605 - 175549
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttg 59  Q
    |||||||||||||||||||||| ||||| | || |||||||||||||||||||||||||    
T  175605 agaggtggtgtactcttacttt-attgttt-ttctaagaggtggtgtactcttactttg 175549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 153621 - 153678
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||| |||||    
T  153621 agaggtggtgtactcttacgttg-ttgt--gttataagaggtggtgtactcttacgttgtt 153678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 175638 - 175584
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    |||||||||||||||||||||   | || |||||||||||||||||||||||||||||    
T  175638 agaggtggtgtactcttacttg--tcgt-tgttataagaggtggtgtactcttacttt 175584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 175705 - 175651
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttacttt 58  Q
    ||||||||||||||||||||    |||||| |||||||||||||||||||||||||||    
T  175705 agaggtggtgtactcttactcg--ttgtct-ttataagaggtggtgtactcttacttt 175651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 153284 - 153312
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  153284 ttataagaggtggtgtactcttactttgt 153312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 153350 - 153378
Alignment:
Q  32 ttataagaggtggtgtactcttactttgt 60  Q
    |||||||||||||||||||||||||||||    
T  153350 ttataagaggtggtgtactcttactttgt 153378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 249
Target Start/End: Complemental strand, 34128 - 34011
Alignment:
Q  132 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 231  Q
    |||| |||||||| ||||||||||||||||| || ||| ||||||||| ||||||| ||||||||||||| ||||||||||||||| |||||||||||||    
T  34128 atgatgttacctatgagttgttaaatgtactcgaggagtgttatgttaggttgtctgctattcatgagcattaaggggatgttaagaagaattattattg 34029  T
Q  232 agtgtatatgatgatgtc 249  Q
    ||||||||||||||||||    
T  34028 agtgtatatgatgatgtc 34011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34212 - 34123
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 91  Q
    ||||||||||||||||||||||| | || | | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34212 agaggtggtgtactcttactttgttggtgtct-ataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 34123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 444 - 547
Alignment:
Q  132 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 231  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  444 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 543  T
Q  232 agtg 235  Q
    ||||    
T  544 agtg 547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 360 - 449
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 91  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  360 agaggtggtgtactcttactttg-ttgt-tgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgagggtatgatg 449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 184
Target Start/End: Complemental strand, 4275 - 4143
Alignment:
Q  52 ttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttg 151  Q
    |||| |||||||||||||||| ||||| || |||||||||||  | ||||||||||||||  ||| | || |||| |||||||| |||| ||| ||||||    
T  4275 ttacgttgtttatgttgatgattatgatgatgttatgatgattgtttatagtgttgaatgagaggcttttttgatgttacatgatgttatctatgagttg 4176  T
Q  152 ttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||||||||||| |||||||||||||||    
T  4175 ttaaatgtacttgatgatggttatgttaagttg 4143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 4056 - 3985
Alignment:
Q  178 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 249  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  4056 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 3985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 208746 - 208655
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgat 93  Q
    ||||||||||||||||||||||| ||||   ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  208746 agaggtggtgtactcttactttg-ttgttgtttataagaggtggtgtaatcttacattgtttatgttgatgagtatgacgaggttatgatgat 208655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 208780 - 208722
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    |||||||||||||||||||||| || || | ||||||||||||||||||||||||||||||    
T  208780 agaggtggtgtactcttacttt-atcgttt-ttataagaggtggtgtactcttactttgtt 208722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 21339 - 21410
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatga 198  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  21339 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttgtcttttattcatga 21410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 6960 - 7017
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  6960 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 7017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 4053 - 3996
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  4053 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 3996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 8739 - 8796
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||||    
T  8739 attacatgatgttatctacgagttgttaaatgtacatgatgatggttatgttaagttg 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 23937 - 23994
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  23937 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 23994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 37202 - 37259
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  37202 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 37259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 62839 - 62896
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  62839 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 62896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 74331 - 74388
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  74331 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 74388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 25569 - 25624
Alignment:
Q  129 tacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  25569 tacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 25624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 37197 - 37252
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagt 182  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||    
T  37197 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagt 37252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 28551 - 28494
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| |||||||||||||||||||||||  ||||||||||||||    
T  28551 attacatgatgttatctatgagttgttaaatgtacttgatgatcgttatgttaagttg 28494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 34016 - 33959
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| |||| ||| |||||||||||||||||||||||  ||||||||||||||    
T  34016 attacatgatgttatctatgagttgttaaatgtacttgatgatcgttatgttaagttg 33959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 28709 - 28580
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||| ||| |||   ||||| ||||||| |||||||| || |||||||||||  ||| |||||||| ||||||||||   | |||    
T  28709 agaggtggtgtactcttacgttg-ttga--gttatgagaggtgatgtactctcacgttgtttatgttattgattatgacgatgttatgatgactgtttat 28613  T
Q  101 agtgttgaatgcaaggttgttatgatattacat 133  Q
      ||||||||   ||||||||||||| ||||||    
T  28612 gatgttgaatatgaggttgttatgatgttacat 28580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 34174 - 34045
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 100  Q
    ||||||||||||||||||| ||| |||   ||||| ||||||| |||||||| || |||||||||||  ||| |||||||| ||||||||||   | |||    
T  34174 agaggtggtgtactcttacgttg-ttga--gttatgagaggtgatgtactctcacgttgtttatgttattgattatgacgatgttatgatgactgtttat 34078  T
Q  101 agtgttgaatgcaaggttgttatgatattacat 133  Q
      ||||||||   ||||||||||||| ||||||    
T  34077 gatgttgaatatgaggttgttatgatgttacat 34045  T

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Target: scaffold0080; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28742 - 28685
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    |||||||||||||| |||| ||| ||||  ||||||||||||||||||||||||| |||||    
T  28742 agaggtggtgtacttttacgttg-ttgt--gttataagaggtggtgtactcttacgttgtt 28685  T

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Target: scaffold0080; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28775 - 28718
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||| |||  | ||||||||||||||||||| |||| |||||    
T  28775 agaggtggtgtactcttactttg-ttg--ttttataagaggtggtgtacttttacgttgtt 28718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 61
Target Start/End: Complemental strand, 28780 - 28751
Alignment:
Q  32 ttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||||||||||    
T  28780 ttataagaggtggtgtactcttactttgtt 28751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34207 - 34150
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    |||||||||||||| |||| ||| ||||  ||||||||||||||||||||||||| |||||    
T  34207 agaggtggtgtacttttacgttg-ttgt--gttataagaggtggtgtactcttacgttgtt 34150  T

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Target: scaffold0080; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34240 - 34183
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||| |||  | ||||||||||||||||||| |||| |||||    
T  34240 agaggtggtgtactcttactttg-ttg--ttttataagaggtggtgtacttttacgttgtt 34183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 61
Target Start/End: Complemental strand, 34245 - 34216
Alignment:
Q  32 ttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||||||||||    
T  34245 ttataagaggtggtgtactcttactttgtt 34216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48202 - 48145
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    |||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||    
T  48202 agaggtggtgtacttttactttg-ttgt--gttataagaggtggtgtactcttactttgtt 48145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48169 - 48109
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||||||| |  | | |||||||||||||||||||||||| |||||    
T  48169 agaggtggtgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtt 48109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 269 - 222
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  269 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 5311 - 5264
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  5311 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 5264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 10831 - 10878
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10831 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 109670 - 109623
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  109670 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 109623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 224152 - 224199
Alignment:
Q  137 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  224152 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 224199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 146057 - 146003
Alignment:
Q  4 ggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||    
T  146057 ggtggtgtactcttactttg-ttgt--gttataagaggtggtgtactcttacgttgtt 146003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 146027 - 145967
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| |  | | |||||||||||||||||||||||| |||||    
T  146027 agaggtggtgtactcttacgttgttgttgttttataagaggtggtgtactcttacgttgtt 145967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 18882 - 18845
Alignment:
Q  147 agttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||||||||||||| |||||||||||||||    
T  18882 agttgttaaatgtacttgatgatggttatgttaagttg 18845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7682 - 7626
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  7682 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacattgtt 7626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 3535 - 3573
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  3535 gagttgttaaatgtacttgatgattgttatgttaagttg 3573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7281 - 7337
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  7281 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtt 7337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7313 - 7368
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| ||||    
T  7313 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgt 7368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 10827 - 10789
Alignment:
Q  146 gagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  10827 gagttgttaagtgtacttgatgatggttatgttaagttg 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 54211 - 54267
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgtt 61  Q
    ||||||||||||||||||| ||| ||||   |||||||||||||||||||||||| |||||    
T  54211 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttacgttgtt 54267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 14923 - 14866
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 184  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  14923 attacatgaagatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 14866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3063 - 3119
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttactttgt 60  Q
    ||||||||||||||||||| ||| |||| |  ||||||||||||||||||||||| ||||    
T  3063 agaggtggtgtactcttacgttg-ttgttt--tataagaggtggtgtactcttacattgt 3119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5925 - 5975
Alignment:
Q  1 agaggtggtgtactcttactttgattgtctgttataagaggtggtgtactcttac 55  Q
    ||||||||||||||||||| ||| ||||   ||||||||||||||||||||||||    
T  5925 agaggtggtgtactcttacgttg-ttgt---ttataagaggtggtgtactcttac 5975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 8656 - 8600
Alignment:
Q  127 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagtt 183  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | ||||||||||||    
T  8656 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagtt 8600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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