View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0412_low_230 (Length: 265)

Name: NF0412_low_230
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0412_low_230
NF0412_low_230
[»] chr2 (8 HSPs)
chr2 (40-228)||(6466132-6466316)
chr2 (70-134)||(29651783-29651847)
chr2 (59-206)||(3395391-3395538)
chr2 (71-134)||(36727644-36727707)
chr2 (70-206)||(5788812-5788946)
chr2 (65-134)||(36729286-36729355)
chr2 (67-134)||(25546947-25547014)
chr2 (59-119)||(19040698-19040758)
[»] chr8 (8 HSPs)
chr8 (40-220)||(18953276-18953459)
chr8 (70-216)||(38290546-38290692)
chr8 (59-136)||(13756537-13756614)
chr8 (58-127)||(21587047-21587116)
chr8 (65-127)||(23394803-23394863)
chr8 (79-134)||(40885776-40885831)
chr8 (59-134)||(42797296-42797371)
chr8 (70-134)||(30254533-30254597)
[»] chr3 (5 HSPs)
chr3 (51-221)||(431961-432131)
chr3 (59-134)||(50331969-50332044)
chr3 (70-136)||(14044292-14044358)
chr3 (59-202)||(20934940-20935082)
chr3 (58-127)||(36097924-36097993)
[»] chr7 (5 HSPs)
chr7 (51-217)||(42080794-42080959)
chr7 (59-221)||(45406698-45406858)
chr7 (59-156)||(43989683-43989779)
chr7 (86-134)||(22528933-22528981)
chr7 (59-119)||(38788967-38789027)
[»] scaffold0053 (1 HSPs)
scaffold0053 (40-217)||(31011-31187)
[»] chr4 (8 HSPs)
chr4 (40-221)||(42757505-42757687)
chr4 (70-134)||(11559521-11559585)
chr4 (59-206)||(13228693-13228839)
chr4 (58-127)||(39976659-39976728)
chr4 (65-125)||(42727943-42728003)
chr4 (59-124)||(24183445-24183510)
chr4 (59-119)||(28475659-28475719)
chr4 (59-127)||(50158189-50158257)
[»] scaffold1315 (1 HSPs)
scaffold1315 (43-221)||(495-674)
[»] scaffold1293 (1 HSPs)
scaffold1293 (43-221)||(1397-1576)
[»] chr6 (5 HSPs)
chr6 (72-134)||(31737226-31737288)
chr6 (59-134)||(1599683-1599758)
chr6 (70-127)||(24360161-24360218)
chr6 (59-119)||(7428510-7428570)
chr6 (70-134)||(16707319-16707383)
[»] chr5 (2 HSPs)
chr5 (65-206)||(38015871-38016012)
chr5 (58-127)||(33012124-33012193)
[»] chr1 (9 HSPs)
chr1 (59-206)||(43387038-43387185)
chr1 (65-206)||(16853617-16853756)
chr1 (68-128)||(3981635-3981695)
chr1 (59-127)||(22636336-22636404)
chr1 (70-118)||(31090337-31090385)
chr1 (70-134)||(47783158-47783222)
chr1 (59-156)||(20306722-20306818)
chr1 (59-119)||(1992423-1992483)
chr1 (59-119)||(40946520-40946580)
[»] scaffold0159 (1 HSPs)
scaffold0159 (70-206)||(33185-33319)
[»] scaffold1345 (1 HSPs)
scaffold1345 (59-145)||(1849-1934)


Alignment Details
Target: chr2 (Bit Score: 144; Significance: 8e-76; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 40 - 228
Target Start/End: Original strand, 6466132 - 6466316
Alignment:
Q  40 cacagacacagagagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgag 139  Q
    |||||||||||||||||| ||||| |||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6466132 cacagacacagagagtctcttaatggagaaatgttaacgtgt----tgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgag 6466227  T
Q  140 agagattattcatatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgactgatgatg 228  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  6466228 agagattattcatatacccaatgctttaggattttgggtgaagaagtgatgtcgatctcacttgtgttgttgctctttgactaatgatg 6466316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 29651783 - 29651847
Alignment:
Q  70 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    ||||||||||||||| ||||| ||||| ||| |||||| ||||||||||| |||||||| |||||    
T  29651783 atgttaatgtgtcaaatgtgagttaaagtttcacattgaatgcaagagtagatgttgaacaacat 29651847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 206
Target Start/End: Complemental strand, 3395538 - 3395391
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatataccc 158  Q
    ||||| |||| ||||||||||||||  ||||| |||||||   || ||| |||||| |||| ||||||| |||||| | || ||||| | ||||||| |     
T  3395538 ttaatggagagatgttaatgtgtcaggtgtgagttaaaataacactttgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatct 3395439  T
Q  159 attgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgt 206  Q
    | ||  ||| ||||||||||||||  |||| |||||||| ||||||||    
T  3395438 aatgtcttaagattttgggtgaagttgtgatgtcaatcttacttgtgt 3395391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 134
Target Start/End: Complemental strand, 36727707 - 36727644
Alignment:
Q  71 tgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||| |||| ||||| | ||||||    
T  36727707 tgttaatgtgtcaattgtgacttaaaatttcacattagatgcaaaagtagatgttaagaaacat 36727644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 206
Target Start/End: Complemental strand, 5788946 - 5788812
Alignment:
Q  70 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccattgctttagg 169  Q
    ||||||||||||||| ||||| |||||||   |||||| |||||| |||| |||||||| ||||| | || ||||| | ||||||  | | ||  ||| |    
T  5788946 atgttaatgtgtcaaatgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaag 5788849  T
Q  170 attttgggtgaagaagtgacgtcaatctcacttgtgt 206  Q
    |||||||||||||  |||| |||||||| ||||||||    
T  5788848 attttgggtgaagttgtgatgtcaatcttacttgtgt 5788812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 36729355 - 36729286
Alignment:
Q  65 gagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    |||| |||||||| |||||| ||||| | ||||||| |||||| ||||||||||| |||||||| |||||    
T  36729355 gagatatgttaatttgtcaagtgtgagtaaaaatttcacattgtatgcaagagtagatgttgaacaacat 36729286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 25546947 - 25547014
Alignment:
Q  67 gaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    |||||| ||||||||||| ||||| ||||| ||  |||||||||||||||  | ||||||||||||||    
T  25546947 gaaatggtaatgtgtcaaatgtgagttaaagttctacattggatgcaagaacatatgttgaaaaacat 25547014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 19040698 - 19040758
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagta 119  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| ||||    
T  19040698 ttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagta 19040758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 18953459 - 18953276
Alignment:
Q  40 cacagacacagagagtctattaatagagaaa---tgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacattt 136  Q
    ||||||||| |||| ||||||||| ||||||   |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18953459 cacagacacggagattctattaatggagaaaggttgttaatgtgtcaactgtgaattaaaatttgacattggatgcaagagtagatgttgaaaaacattt 18953360  T
Q  137 gagagagattattcatatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgac 220  Q
    ||| ||||||||||| | ||  | |||||||||| |||||||||||||||||  || ||||||||||| |||||||||||||||    
T  18953359 gagggagattattcaaaaacttaatgctttaggactttgggtgaagaagtgatatcgatctcacttgtattgttgctctttgac 18953276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 38290546 - 38290692
Alignment:
Q  70 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccattgctttagg 169  Q
    ||||||||||||||| ||||| ||| ||||| |||||  ||||||||| ||||||| |||||||| | || | | | | | ||||||| | ||| ||| |    
T  38290546 atgttaatgtgtcaagtgtgagttataattttacattacatgcaagagaaaatgtttaaaaacatataagtgggttgactgatatacctaatgccttaag 38290645  T
Q  170 attttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctt 216  Q
    | ||| ||||||||||| | |||||  ||| || |||||||||||||    
T  38290646 acttttggtgaagaagttatgtcaacttcatttatgttgttgctctt 38290692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 13756537 - 13756614
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacattt 136  Q
    |||||| ||| ||||||||||||||| ||||| |||||||   |||||| |||||| |||| ||||||| ||||||||    
T  13756537 ttaatatagatatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacattt 13756614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 21587116 - 21587047
Alignment:
Q  58 attaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 127  Q
    ||||| ||||| |||||| |||||||||||| | ||||| ||| ||||| |||||||||||| |||||||    
T  21587116 attaagagagatatgttattgtgtcaattgtaatttaaattttcacattagatgcaagagtagatgttga 21587047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 23394863 - 23394803
Alignment:
Q  65 gagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 127  Q
    |||||||||| |||||||||  |||| ||||||||| |||||||||||||||| |||| ||||    
T  23394863 gagaaatgttgatgtgtcaa--gtgagttaaaatttcacattggatgcaagagcaaatattga 23394803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 40885776 - 40885831
Alignment:
Q  79 tgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    |||||| ||||| ||||||||| ||||||||||||| | ||||||||||| |||||    
T  40885776 tgtcaagtgtgatttaaaatttcacattggatgcaataataaatgttgaacaacat 40885831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 42797371 - 42797296
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    |||||||| | ||||||||||||||| ||||| |||||||   |||||| |||||| |||| ||||||| ||||||    
T  42797371 ttaatagaaagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtatatgttgagaaacat 42797296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 30254533 - 30254597
Alignment:
Q  70 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    ||||||||||||||| ||||| |||||||| |||| | |||||||  ||| |||||||| |||||    
T  30254533 atgttaatgtgtcaaatgtgagttaaaattcgacaatagatgcaaacgtatatgttgaacaacat 30254597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 6e-49; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 51 - 221
Target Start/End: Original strand, 431961 - 432131
Alignment:
Q  51 agagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattc 150  Q
    ||||||| ||||| |||| || |||||||||||||||||| |||||||| ||||||||||||||||||| ||||||| |||||| ||||  ||||||| |    
T  431961 agagtctcttaatggagagatattaatgtgtcaattgtgagttaaaattcgacattggatgcaagagtatatgttgagaaacatatgaggaagattatcc 432060  T
Q  151 atatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgact 221  Q
    ||||| | | |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  432061 atataactaatgctttaggactttgggtgaagaagtgatgtcgatctcacttgtgttgttgctctttgact 432131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 50332044 - 50331969
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    |||||||||| ||||||||||||||| ||||| |||||||   |||||| |||||| |||| ||||||| ||||||    
T  50332044 ttaatagagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacat 50331969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 14044292 - 14044358
Alignment:
Q  70 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacattt 136  Q
    ||||||||||||||| ||||| ||||| ||  | ||||||||||| ||||||||||||| |||||||    
T  14044292 atgttaatgtgtcaagtgtgatttaaagttccatattggatgcaatagtaaatgttgaacaacattt 14044358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 202
Target Start/End: Complemental strand, 20935082 - 20934940
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatataccc 158  Q
    ||||| |||| ||||||||||||||  ||||| ||||||||| | |||| |||||| |||| ||| ||| |||||||| || ||||| | ||||||||      
T  20935082 ttaatggagagatgttaatgtgtcaggtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagtgagatgactcatatacat 20934984  T
Q  159 attgctttaggattttgggtgaagaagtgacgtcaatctcactt 202  Q
    | |||||| ||| ||||   ||||| |||| || ||||||||||    
T  20934983 aatgctttcggactttgaaagaagatgtgatgtgaatctcactt 20934940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 36097924 - 36097993
Alignment:
Q  58 attaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 127  Q
    ||||| ||||| |||||| |||||||||||| | ||||| ||| ||||| ||||||| |||| |||||||    
T  36097924 attaagagagatatgttattgtgtcaattgtaatttaaattttcacattagatgcaaaagtagatgttga 36097993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 4e-44; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 51 - 217
Target Start/End: Complemental strand, 42080959 - 42080794
Alignment:
Q  51 agagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattc 150  Q
    ||||||| ||||| |||| || ||||||||||| | |||| ||||||||||||||| |||||||||||| ||||||| |||||| |||| |||||||| |    
T  42080959 agagtctcttaatggagagatattaatgtgtcagtcgtgagttaaaatttgacattagatgcaagagtagatgttgagaaacatatgag-gagattatcc 42080861  T
Q  151 atatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctcttt 217  Q
    ||||||| | |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  42080860 atatacctaatgctttaggactttgggtgaagaagtgatgtcgatctcacttgtgttgttgctcttt 42080794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 59 - 221
Target Start/End: Original strand, 45406698 - 45406858
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatataccc 158  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||| | ||||||| |||||| |||| |||||||| ||||||||     
T  45406698 ttaatggagaaatgttaatgtgtcaattgtgagttaaaatttgacatttgatgtaagaggagatgttgagaaacatatgagggagattatccatatacct 45406797  T
Q  159 attgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgact 221  Q
    | |||||||||| ||||| ||||||||||| ||| |||||||   ||||||||||||||||||    
T  45406798 aatgctttaggactttggttgaagaagtgatgtcgatctcac--atgttgttgctctttgact 45406858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 43989683 - 43989779
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatac 156  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| |||| ||| ||| |||||||| || ||||| ||||||||||    
T  43989683 ttaattgagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagtgagatgattcatatac 43989779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 22528933 - 22528981
Alignment:
Q  86 tgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| ||||||    
T  22528933 tgtgagttaaaattttacattgtatgcaagagtaaatgttgagaaacat 22528981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 38789027 - 38788967
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagta 119  Q
    ||||| |||| |||||||||||| || ||| | ||||||||| |||||| |||||||||||    
T  38789027 ttaatggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagta 38788967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 31011 - 31187
Alignment:
Q  40 cacagacacagagagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgag 139  Q
    |||||||||  ||||||| ||||| |||| || ||||| ||||| | |||| ||||||||||||||| |||||||||||| ||||||| |||||| ||||    
T  31011 cacagacacgaagagtctcttaatggagagatattaatttgtcagtcgtgagttaaaatttgacattagatgcaagagtagatgttgagaaacatatgag 31110  T
Q  140 agagattattcatatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctcttt 217  Q
     |||||||| |||||||| | |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  31111 -gagattatccatatacctaatgctttaggactttgggtgaagaagtgatgtcgatctcacttgtgttgttgctcttt 31187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 40 - 221
Target Start/End: Complemental strand, 42757687 - 42757505
Alignment:
Q  40 cacagacacagagagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattgg--atgcaagagtaaatgttgaaaaacatttg 137  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||||||||| | ||| ||| |||||||  ||||||||||| |||||||||||||| ||    
T  42757687 cacagacacggagagtctcttaatagagagatgttaatgtgtcaattgtgagtaaaagtttaacattggatatgcaagagtagatgttgaaaaacatatg 42757588  T
Q  138 agagagattattcatatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgact 221  Q
    || ||||||| ||||||||| | ||  |||||| |||||||||| | |||| ||| |||||||||||||||||||| |||||||    
T  42757587 agggagatta-tcatatacctaatgtcttaggactttgggtgaaaaggtgatgtcgatctcacttgtgttgttgctatttgact 42757505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 11559521 - 11559585
Alignment:
Q  70 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    |||||||| ||| || ||||| ||||||||||| |||| |||||||||||||||||||| |||||    
T  11559521 atgttaatatgtaaagtgtgacttaaaatttgatattgtatgcaagagtaaatgttgaacaacat 11559585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 206
Target Start/End: Original strand, 13228693 - 13228839
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatataccc 158  Q
    ||||| |||| ||||||||||||||| ||||| |||||||   |||||| |||||| |||| ||||||| |||||| | || ||||| | ||||||| |     
T  13228693 ttaatggagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatct 13228792  T
Q  159 attgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgt 206  Q
    | | | |||  |||||||||||||  |||| |||||||| ||||||||    
T  13228793 aattc-ttaaaattttgggtgaagttgtgatgtcaatcttacttgtgt 13228839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 39976659 - 39976728
Alignment:
Q  58 attaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 127  Q
    ||||| ||||| |||||| |||||||||||| | ||||| ||| ||||| |||||||||||| |||||||    
T  39976659 attaagagagatatgttattgtgtcaattgtaatttaaattttcacattagatgcaagagtagatgttga 39976728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 42728003 - 42727943
Alignment:
Q  65 gagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgtt 125  Q
    |||| ||||||||||||||||||| | ||||| ||| ||||| |||||||||||| |||||    
T  42728003 gagatatgttaatgtgtcaattgttacttaaagttttacatttgatgcaagagtagatgtt 42727943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 24183510 - 24183445
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgt 124  Q
    ||||| |||| |||||||||||| || ||| | ||||||||| |||||| ||||||||||| ||||    
T  24183510 ttaatggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagtagatgt 24183445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 28475719 - 28475659
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagta 119  Q
    ||||| |||| |||||||||||| || ||| | ||||||||| |||||| |||||||||||    
T  28475719 ttaatggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagta 28475659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 50158189 - 50158257
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 127  Q
    ||||| |||| ||||||||||||||| | ||| ||||| ||| |||||  ||||||||||| |||||||    
T  50158189 ttaatggagagatgttaatgtgtcaagtatgagttaaagtttcacattttatgcaagagtatatgttga 50158257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1315 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1315
Description:

Target: scaffold1315; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 221
Target Start/End: Original strand, 495 - 674
Alignment:
Q  43 agacacagagagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggat--gcaagagtaaatgttgaaaaacatttgaga 140  Q
    |||||| |||||||| |||||||||| |||||||||||||| |||| | | ||| ||  |||||||||  ||||||||| ||||||| |||||| ||||     
T  495 agacacggagagtctcttaatagagagatgttaatgtgtcagttgtaagtaaaagttcaacattggatatgcaagagtagatgttgagaaacatatgagg 594  T
Q  141 gagattattcatatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgact 221  Q
    |||||||| |||||||| | ||  |||||| |||||||||| |||||| ||| |||||||||||| ||||||| |||||||    
T  595 gagattat-catatacctaatgtcttaggactttgggtgaaaaagtgatgtcgatctcacttgtgctgttgctatttgact 674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1293 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1293
Description:

Target: scaffold1293; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 221
Target Start/End: Complemental strand, 1576 - 1397
Alignment:
Q  43 agacacagagagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggat--gcaagagtaaatgttgaaaaacatttgaga 140  Q
    |||||| |||||||| |||||||||| |||||||||||||| |||| | | ||| ||  |||||||||  ||||||||| ||||||| |||||| ||||     
T  1576 agacacggagagtctcttaatagagagatgttaatgtgtcagttgtaagtaaaagttcaacattggatatgcaagagtagatgttgagaaacatatgagg 1477  T
Q  141 gagattattcatatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgact 221  Q
    |||||||| |||||||| | ||  |||||| |||||||||| |||||| ||| |||||||||||| ||||||| |||||||    
T  1476 gagattat-catatacctaatgtcttaggactttgggtgaaaaagtgatgtcgatctcacttgtgctgttgctatttgact 1397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 31737288 - 31737226
Alignment:
Q  72 gttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||| |||||    
T  31737288 gttaatgtgtcaattgtgagttaaaatttcacattggatgcaagagtagatgttgaacaacat 31737226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 1599683 - 1599758
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    |||||||||| ||||||||||||||| ||||| |||||||   |||||| |||||| |||| ||||||| ||||||    
T  1599683 ttaatagagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacat 1599758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 24360218 - 24360161
Alignment:
Q  70 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 127  Q
    ||||||||||||||||| ||| ||||| ||  ||| |||||||||||||| |||||||    
T  24360218 atgttaatgtgtcaattttgacttaaagttccacaatggatgcaagagtagatgttga 24360161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 7428570 - 7428510
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagta 119  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| ||||    
T  7428570 ttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagta 7428510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 16707319 - 16707383
Alignment:
Q  70 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    |||||||||||||||  |||| || || ||| |||||||| | ||||||||||||||| ||||||    
T  16707319 atgttaatgtgtcaaacgtgagttgaagtttcacattggaagtaagagtaaatgttgataaacat 16707383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 38016012 - 38015871
Alignment:
Q  65 gagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccattgct 164  Q
    |||| ||||||||||||||| ||||| |||||||   |||||| |||||| |||| |||||||  ||||| | || ||||| | ||||||| | | ||      
T  38016012 gagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagcaacatataagtgagatgactcatatatctaatgac 38015913  T
Q  165 ttaggattttgggtgaagaagtgacgtcaatctcacttgtgt 206  Q
    ||| ||||||||||||||  |||| |||||||||||||||||    
T  38015912 ttaagattttgggtgaagttgtgatgtcaatctcacttgtgt 38015871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 33012193 - 33012124
Alignment:
Q  58 attaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 127  Q
    ||||| ||||| |||||| |||||||||||| | ||||| ||  ||||| |||||||||||| |||||||    
T  33012193 attaagagagatatgttattgtgtcaattgtaatttaaagttccacattagatgcaagagtagatgttga 33012124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 206
Target Start/End: Complemental strand, 43387185 - 43387038
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatataccc 158  Q
    |||| ||||| ||||||||||||||| ||||| ||||||||  |||||| |||||| |||| ||||||| |||||| | || || || | || |||| |     
T  43387185 ttaacagagagatgttaatgtgtcaagtgtgagttaaaattacacattgaatgcaatagtagatgttgagaaacatataagtgaaatgactcgtatatct 43387086  T
Q  159 attgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgt 206  Q
    | ||  ||| ||||||||||||||  |||| |||||||| ||||||||    
T  43387085 aatgtcttaagattttgggtgaagttgtgatgtcaatcttacttgtgt 43387038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 16853617 - 16853756
Alignment:
Q  65 gagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccattgct 164  Q
    |||| ||||||| ||||||||||||| | ||| ||| | ||||||||||  ||||||| ||||||||||| | || ||||| ||  ||||||  | ||||    
T  16853617 gagagatgttaaagtgtcaattgtgactcaaagtttcaaattggatgca--agtaaatcttgaaaaacatataagtgagatgatcaatatacataatgct 16853714  T
Q  165 ttaggattttgggtgaagaagtgacgtcaatctcacttgtgt 206  Q
    ||| | |||||||||| || |||  |||||||||| ||||||    
T  16853715 ttaaggttttgggtgatgatgtggtgtcaatctcagttgtgt 16853756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 3981635 - 3981695
Alignment:
Q  68 aaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaa 128  Q
    |||||||||||||| || ||| ||||||| ||| |||||| ||||||||||| ||||||||    
T  3981635 aaatgttaatgtgtaaagtgtaaattaaagttttacattgaatgcaagagtagatgttgaa 3981695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 22636404 - 22636336
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 127  Q
    ||||| |||| |||||||| | |||| ||||| |||||||||||| ||| ||||||||||| |||||||    
T  22636404 ttaatggagagatgttaatttttcaagtgtgagttaaaatttgactttgaatgcaagagtagatgttga 22636336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 31090385 - 31090337
Alignment:
Q  70 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagt 118  Q
    ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  31090385 atgttaatgtgtcaattatgaattaaaattttacaatgtatgcaagagt 31090337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 47783158 - 47783222
Alignment:
Q  70 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 134  Q
    ||||||||||||||| ||||| ||||| ||| ||||||| ||||||||||| |||| || |||||    
T  47783158 atgttaatgtgtcaagtgtgagttaaagtttcacattggctgcaagagtaattgtttaacaacat 47783222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 20306818 - 20306722
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatac 156  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| |||| ||  ||| |||||||| || ||||| | ||||||||    
T  20306818 ttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactcatatac 20306722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 1992423 - 1992483
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagta 119  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| ||||    
T  1992423 ttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagta 1992483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 40946520 - 40946580
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagta 119  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| ||||    
T  40946520 ttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagta 40946580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 206
Target Start/End: Complemental strand, 33319 - 33185
Alignment:
Q  70 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccattgctttagg 169  Q
    ||||||||||||||| ||||| |||||||   |||||| |||||| |||| |||||||| ||||| | || ||||| | ||||||  | | ||  ||| |    
T  33319 atgttaatgtgtcaaatgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaag 33222  T
Q  170 attttgggtgaagaagtgacgtcaatctcacttgtgt 206  Q
    |||||||||||||  |||| |||||||| ||||||||    
T  33221 attttgggtgaagttgtgatgtcaatcttacttgtgt 33185  T

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Target: scaffold1345 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1345
Description:

Target: scaffold1345; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 145
Target Start/End: Original strand, 1849 - 1934
Alignment:
Q  59 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagat 145  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| |||| ||| ||| |||||||| || |||||    
T  1849 ttaattgagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagtgagat 1934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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