View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0412_low_234 (Length: 261)
Name: NF0412_low_234
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0412_low_234 |
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Alignment Details
Target: chr4 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 45 - 187
Target Start/End: Original strand, 41705132 - 41705274
Alignment:
| Q |
45 |
atcatcacacaccactccatctacaaattcaaaaactcttctcctctctctgtattcaagttccaacacnnnnnnncaaata--ctgtttaaccaaatgg |
142 |
Q |
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| T |
41705132 |
atcatcacacaccactccatctacaaattcaaaaactcttctc--ctctctgtattcaagttccaacacaaaaaaacaaataccctgtttaaccaaatgg |
41705229 |
T |
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| Q |
143 |
cttctcccctgttatttctcctcatcatcacactcttcatctcac |
187 |
Q |
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| T |
41705230 |
cttctcccctgttatttctcctcctcatcacactcttcatttcac |
41705274 |
T |
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