View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0412_low_248 (Length: 256)
Name: NF0412_low_248
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0412_low_248 |
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Alignment Details
Target: chr4 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 36448199 - 36448310
Alignment:
| Q |
54 |
acacaaacatggaacaatggcggaactgaagtaaactagatagaaatcacaacctccatttccaaaaacctcataaacccacaaccttaaaaaaccttac |
153 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
36448199 |
acacaaacatggaacaatggcggaactgaagtaaactagatagaaatcacaacctccatttccataaacctcataaacccacaaccttaaaaaaccttac |
36448298 |
T |
|
| Q |
154 |
cttaacttcatc |
165 |
Q |
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|||||||||||| |
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| T |
36448299 |
cttaacttcatc |
36448310 |
T |
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