View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0412_low_323 (Length: 203)
Name: NF0412_low_323
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0412_low_323 |
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Alignment Details
Target: chr8 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 15556647 - 15556509
Alignment:
| Q |
1 |
cttcatattcatatctgccaccaacatgttcttccaaattatgaacaatggtaacatcttcatccttttcattctgatcttcgttcactaaaacaaaatc |
100 |
Q |
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| T |
15556647 |
cttcatattcatatctgccaccaacatgttcttccaaattatgaacaatggtaacatcttcatccttttcattctgatcttcgttcactaaaacaaaatc |
15556548 |
T |
|
| Q |
101 |
ttcatccaaattatccgtgctaccatcttctacattcat |
139 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
15556547 |
ttcatccaaattatccgtgctaccatcttctacattcat |
15556509 |
T |
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