View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0412_low_4 (Length: 583)
Name: NF0412_low_4
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0412_low_4 |
 | |
|
| [»] scaffold0012 (1 HSPs) |
| | |
|
| [»] scaffold0265 (1 HSPs) |
| | |
|
| [»] scaffold0093 (1 HSPs) |
| | |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
| [»] scaffold0029 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0012 (Bit Score: 459; Significance: 0; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 42 - 564
Target Start/End: Complemental strand, 57451 - 56929
Alignment:
| Q |
42 |
gatgaaggtgggttagacatcaaacctacgcgcttgattaacgaggctttaattctgaaattattttgggatataattgcacaggaaacacagtggtcta |
141 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
57451 |
gatgaaggtgggttagacatcaaacctacgcgcttgattaacgaggctttaattctgaaattatcttgggatttaattgcacaggaaacacagtggtcta |
57352 |
T |
|
| Q |
142 |
atttattcaagaggcgatatttctcaaacggtcagccctccatgcgctattttaaatcctcggtttggtcagatataaaaatacatattggcacggttat |
241 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||||| |
|
|
| T |
57351 |
atttattcaagaggcgatttttctcaaacggtcagccctccatgcgttattttaaatcctcggtttggtcgggtattaaaatacatattggcacggttat |
57252 |
T |
|
| Q |
242 |
gaggaatattttgtggattgtgggaaatggaaacaatattcatttctggactgataattggttaggtgttcctcttgtggatttgatgaatattgatgtt |
341 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
57251 |
gagcaattcattgtggattgtgggaaatggaaacaatattcatttctggactgataattggttaggtgttcctcttgtggatttgatgaatattgatgtt |
57152 |
T |
|
| Q |
342 |
gattttcacggacatatgaaaggtatggtgtcggaagttatcgttaatggaacctggaacatacctgcagtaatttcagattttggggacattaaagagt |
441 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
57151 |
gattttcacggacatatgaaaggtatggtgtcggaagttatcgttaatggaacctggaacataccggcagtaatttcagattttagggacattaaagagc |
57052 |
T |
|
| Q |
442 |
gcctagatgctgtcgtcatacctcgtacacagctcagggatgtgctggtttggaagcactctttggatggaaccttgaattcgaagattgctagctcttt |
541 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
57051 |
gcctagatgatgtcgtcatacctcgtacatagctcagggatgtgctggtttggaagcactctttggatggaaccttgaattcgaagattgctagctcttt |
56952 |
T |
|
| Q |
542 |
catgcgtcctccatcacaggttc |
564 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
56951 |
catgcgtcctccatcacaggttc |
56929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 411; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 42 - 564
Target Start/End: Complemental strand, 21879596 - 21879074
Alignment:
| Q |
42 |
gatgaaggtgggttagacatcaaacctacgcgcttgattaacgaggctttaattctgaaattattttgggatataattgcacaggaaacacagtggtcta |
141 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
21879596 |
gatgaaggtgggttagacatcaaacatacgtgcttgattaacgaggctttaattctgaaattatcttgggatttaattgcacgggaaacacagtggtcta |
21879497 |
T |
|
| Q |
142 |
atttattcaagaggcgatatttctcaaacggtcagccctccatgcgctattttaaatcctcggtttggtcagatataaaaatacatattggcacggttat |
241 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| | ||||||||||||||||| |
|
|
| T |
21879496 |
atttattcaaaagaagatatttctcaaacggtcagccctccatgcgctattttaaatcctcggtttggtcgggtattaaacttcatattggcacggttat |
21879397 |
T |
|
| Q |
242 |
gaggaatattttgtggattgtgggaaatggaaacaatattcatttctggactgataattggttaggtgttcctcttgtggatttgatgaatattgatgtt |
341 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
21879396 |
gagcaattctttgtggattgtgggaaatggaaacaatattcatttttggactgataattggctaggtgttcctcttgtggagttgatgaatattaatgtt |
21879297 |
T |
|
| Q |
342 |
gattttcacggacatatgaaaggtatggtgtcggaagttatcgttaatggaacctggaacatacctgcagtaatttcagattttggggacattaaagagt |
441 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
21879296 |
gattttcacggacatatgaaaggtatggtgtcggaagttattgttaatggaacctggaacatacctgcagttatttcagattttggggacattaaagaga |
21879197 |
T |
|
| Q |
442 |
gcctagatgctgtcgtcatacctcgtacacagctcagggatgtgctggtttggaagcactctttggatggaaccttgaattcgaagattgctagctcttt |
541 |
Q |
| |
|
|||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
21879196 |
gcctagatgctgtcgtcatatctcgtacgcaactcagggatgtgctggtttggaagcactctttggatggagccttgaattcgaagatttctagctcttt |
21879097 |
T |
|
| Q |
542 |
catgcgtcctccatcacaggttc |
564 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
21879096 |
catgcgtcctccatcacaggttc |
21879074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 42 - 564
Target Start/End: Complemental strand, 1926403 - 1925881
Alignment:
| Q |
42 |
gatgaaggtgggttagacatcaaacctacgcgcttgattaacgaggctttaattctgaaattattttgggatataattgcacaggaaacacagtggtcta |
141 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||| | ||||| |||||||| |
|
|
| T |
1926403 |
gatgaaggtgggttagacatcaaaactacgcgcttgattaatgaggctttaattctgaaattatcttgggatttaattgcacggcaaacatagtggtctc |
1926304 |
T |
|
| Q |
142 |
atttattcaagaggcgatatttctcaaacggtcagccctccatgcgctattttaaatcctcggtttggtcagatataaaaatacatattggcacggttat |
241 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| | ||||||||||||||||| |
|
|
| T |
1926303 |
atttattcaagaggcgatatttttcaaacggtcagccctccatgcgctattttaaatcctcggtttggtcgggtattaaacttcatattggcacggttat |
1926204 |
T |
|
| Q |
242 |
gaggaatattttgtggattgtgggaaatggaaacaatattcatttctggactgataattggttaggtgttcctcttgtggatttgatgaatattgatgtt |
341 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1926203 |
gagcaattctttgtggattgtgggaaatggaaacaatattcatttctggactgataattggctaggtgttcctcttgtcgatttgatgaatattgatgtt |
1926104 |
T |
|
| Q |
342 |
gattttcacggacatatgaaaggtatggtgtcggaagttatcgttaatggaacctggaacatacctgcagtaatttcagattttggggacattaaagagt |
441 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
1926103 |
gattttcatggacatatgaaaggtatggtgtcggaagttattgttaatggaacctggaacatacctgcagctatttcagattttggggacattcaagagc |
1926004 |
T |
|
| Q |
442 |
gcctagatgctgtcgtcatacctcgtacacagctcagggatgtgctggtttggaagcactctttggatggaaccttgaattcgaagattgctagctcttt |
541 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
1926003 |
gcctagatgctgtcgtcatacctcgtacacatctcagggatgtgctggtttggaagcactctttggatggagtcttgaattcgaagaatgctagctcttt |
1925904 |
T |
|
| Q |
542 |
catgcgtcctccatcacaggttc |
564 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
1925903 |
catgcgtcctccatcacaggttc |
1925881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 351; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 42 - 564
Target Start/End: Original strand, 21811492 - 21812014
Alignment:
| Q |
42 |
gatgaaggtgggttagacatcaaacctacgcgcttgattaacgaggctttaattctgaaattattttgggatataattgcacaggaaacacagtggtcta |
141 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| |
|
|
| T |
21811492 |
gatgaaggtgggttagacctcatgcctacgcgcttgattaatgaggctttaattctgaaattatcttgggatttaattgcacgggaaacacagtggtctc |
21811591 |
T |
|
| Q |
142 |
atttattcaagaggcgatatttctcaaacggtcagccctccatgcgctattttaaatcctcggtttggtcagatataaaaatacatattggcacggttat |
241 |
Q |
| |
|
|| | ||||| ||| |||||||||||||||||||||||||||||| |||||||||||| || |||||||| | ||| ||| | ||||||||||||||||| |
|
|
| T |
21811592 |
atcttttcaaaaggagatatttctcaaacggtcagccctccatgcactattttaaatcatccgtttggtcgggtattaaacttcatattggcacggttat |
21811691 |
T |
|
| Q |
242 |
gaggaatattttgtggattgtgggaaatggaaacaatattcatttctggactgataattggttaggtgttcctcttgtggatttgatgaatattgatgtt |
341 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||| |
|
|
| T |
21811692 |
gagcaattctttgtggattgtgggaaatggaaacaatattcatttctggactgataattggctaggtgttcctcttgtagagttgatgaatattgatgtt |
21811791 |
T |
|
| Q |
342 |
gattttcacggacatatgaaaggtatggtgtcggaagttatcgttaatggaacctggaacatacctgcagtaatttcagattttggggacattaaagagt |
441 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
21811792 |
gattttcatggacatatgaaaggtatggtgtcggaagttattgttaatggtacctggaacatacctgcagctattgcagattttggggacattaaagagc |
21811891 |
T |
|
| Q |
442 |
gcctagatgctgtcgtcatacctcgtacacagctcagggatgtgctggtttggaagcactctttggatggaaccttgaattcgaagattgctagctcttt |
541 |
Q |
| |
|
||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||| |
|
|
| T |
21811892 |
gcctagatgttgtcgtcttacctcgtactcaactcagggatgtgctggtttggaagcactctttggatggagtcttgaattccaagcttgctcgctcttt |
21811991 |
T |
|
| Q |
542 |
catgcgtcctccatcacaggttc |
564 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
21811992 |
catgcgtcctccttcacaggttc |
21812014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 29304668 - 29304501
Alignment:
| Q |
44 |
tgaaggtgggttagacatcaaacctacgcgcttgattaacgaggctttaattctgaaattattttgggatataattgcacaggaaacacagtggtctaat |
143 |
Q |
| |
|
|||||||||||| || ||||| |||||||| ||||||||||||||||| ||||| ||||| | ||||||| |||||||| | || || || ||||| ||| |
|
|
| T |
29304668 |
tgaaggtgggtttgatatcaagcctacgcgtttgattaacgaggctttgattcttaaattttcttgggatttaattgcaaaagatactcaatggtcgaat |
29304569 |
T |
|
| Q |
144 |
ttattcaagaggcgatatttctcaaacggtcagccctccatgcgctattttaaatcctcggtttggtc |
211 |
Q |
| |
|
||||| |||| ||| ||||||||| | |||||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
29304568 |
ttatttaagatgcgttatttctcacatggtcagcctagcaagcgctgttttaaatcctcggtttggtc |
29304501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 38 - 211
Target Start/End: Complemental strand, 41345599 - 41345427
Alignment:
| Q |
38 |
gtgagatgaaggtgggttagacatcaaacctacgcgcttgattaacgaggctttaattctgaaattattttgggatataattgcacaggaaacacagtgg |
137 |
Q |
| |
|
||||| |||||||||||| || ||||| |||||||| ||||||||||| ||||| ||||| ||||| | ||||||| |||||||| | || || || ||| |
|
|
| T |
41345599 |
gtgagctgaaggtgggtttgatatcaagcctacgcggttgattaacgaagctttgattcttaaattgtcttgggatttaattgcaaaagatactcaatgg |
41345500 |
T |
|
| Q |
138 |
tctaatttattcaagaggcgatatttctcaaacggtcagccctccatgcgctattttaaatcctcggtttggtc |
211 |
Q |
| |
|
|| |||||||| |||| ||| ||||||||| | ||||| || || |||||||||||||||||| |||||||| |
|
|
| T |
41345499 |
tcgaatttatttaagatgcgttatttctcacatggtca-cctagcaagcgctattttaaatcctcagtttggtc |
41345427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0265 (Bit Score: 339; Significance: 0; HSPs: 1)
Name: scaffold0265
Description:
Target: scaffold0265; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 42 - 564
Target Start/End: Complemental strand, 21317 - 20795
Alignment:
| Q |
42 |
gatgaaggtgggttagacatcaaacctacgcgcttgattaacgaggctttaattctgaaattattttgggatataattgcacaggaaacacagtggtcta |
141 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||| | ||||| |||||||| |
|
|
| T |
21317 |
gatgaaggtgggttagacttcatttctacgcgcttgattaatgaggctttaattctgaaattatcttgggatttaattgcacggtaaacatagtggtctc |
21218 |
T |
|
| Q |
142 |
atttattcaagaggcgatatttctcaaacggtcagccctccatgcgctattttaaatcctcggtttggtcagatataaaaatacatattggcacggttat |
241 |
Q |
| |
|
|||| ||||| ||| ||||||| |||||||||||||||||||||| |||||||||||| || |||||||| | ||| ||| | ||||||||||||||||| |
|
|
| T |
21217 |
attttttcaataggtgatatttttcaaacggtcagccctccatgctctattttaaatcttctgtttggtcgggtattaaacttcatattggcacggttat |
21118 |
T |
|
| Q |
242 |
gaggaatattttgtggattgtgggaaatggaaacaatattcatttctggactgataattggttaggtgttcctcttgtggatttgatgaatattgatgtt |
341 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||| |
|
|
| T |
21117 |
gagcaattctttgtggattgtgggaaatggaaacaatattcatttctggactgataattggctaggtgttcctcttgtagagttgatgaatattgatgtt |
21018 |
T |
|
| Q |
342 |
gattttcacggacatatgaaaggtatggtgtcggaagttatcgttaatggaacctggaacatacctgcagtaatttcagattttggggacattaaagagt |
441 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
21017 |
gattttcatggacatatgaaaggtatggtgtcggaagttattgttaatggtacctggaacatacctgcagctattgcagattttggggacattaaagagc |
20918 |
T |
|
| Q |
442 |
gcctagatgctgtcgtcatacctcgtacacagctcagggatgtgctggtttggaagcactctttggatggaaccttgaattcgaagattgctagctcttt |
541 |
Q |
| |
|
||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||| |
|
|
| T |
20917 |
gcctagatgttgtcgtcttacctcgtactcaactcagggatgtgctggtttggaagcactctttggatggagtcttgaattccaagcttgctcgctcttt |
20818 |
T |
|
| Q |
542 |
catgcgtcctccatcacaggttc |
564 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
20817 |
catgcgtcctccttcacaggttc |
20795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0093 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: scaffold0093
Description:
Target: scaffold0093; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 42 - 550
Target Start/End: Original strand, 14350 - 14858
Alignment:
| Q |
42 |
gatgaaggtgggttagacatcaaacctacgcgcttgattaacgaggctttaattctgaaattattttgggatataattgcacaggaaacacagtggtcta |
141 |
Q |
| |
|
||||||||||||||||| |||| ||||||||| |||||||| |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14350 |
gatgaaggtgggttagatatcagacctacgcgattgattaatgaggctttaattctaaaattatcttgggatttaattgcacaggaaacacagtggtcta |
14449 |
T |
|
| Q |
142 |
atttattcaagaggcgatatttctcaaacggtcagccctccatgcgctattttaaatcctcggtttggtcagatataaaaatacatattggcacggttat |
241 |
Q |
| |
|
|||||||||| || ||||||||||| |||| |||||||||||||||||||||||||||||||||||| | || ||| || |||||||||||||| | |
|
|
| T |
14450 |
gtttattcaagcagctttatttctcaaatggtcggccctccatgcgctattttaaatcctcggtttggtcgggcattaaagtatatattggcacggtttt |
14549 |
T |
|
| Q |
242 |
gaggaatattttgtggattgtgggaaatggaaacaatattcatttctggactgataattggttaggtgttcctcttgtggatttgatgaatattgatgtt |
341 |
Q |
| |
|
||| ||| |||||||||||| ||| ||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||||| ||||||| | |
|
|
| T |
14550 |
gagcaattctttgtggattgttggagatggaaataatattaatttctggactgataattggttagatgatcctcttgtggatttgatgagtattgatact |
14649 |
T |
|
| Q |
342 |
gattttcacggacatatgaaaggtatggtgtcggaagttatcgttaatggaacctggaacatacctgcagtaatttcagattttggggacattaaagagt |
441 |
Q |
| |
|
||||||||||| | |||||||||| | |||||||||||||||||| |||||||||||||| ||| ||| |||| ||||||||| |||||| |||| |
|
|
| T |
14650 |
gattttcacggtcttatgaaaggtttcatgtcggaagttatcgttatcggaacctggaacatgccttcagcgctttccgattttgggaacattagagagc |
14749 |
T |
|
| Q |
442 |
gcctagatgctgtcgtcatacctcgtacacagctcagggatgtgctggtttggaagcactctttggatggaaccttgaattcgaagattgctagctcttt |
541 |
Q |
| |
|
|||| || ||||| ||| |||||||||| | |||| ||||||||| ||||||| ||||||||| |||||||| |||| ||||| |||| |||||||| |
|
|
| T |
14750 |
gcctcgaggctgttgtcctacctcgtaccccgctcgtggatgtgctagtttggatgcactctttagatggaacaatgaacacgaagcttgcaagctcttt |
14849 |
T |
|
| Q |
542 |
catgcgtcc |
550 |
Q |
| |
|
| ||||||| |
|
|
| T |
14850 |
cttgcgtcc |
14858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 127; Significance: 3e-65; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 367 - 565
Target Start/End: Complemental strand, 7754 - 7557
Alignment:
| Q |
367 |
tggtgtcggaagttatcgttaatggaacctggaacatacctgcagtaatttcagattttggggacattaaagagtgcctagatgctgtcgtcatacctcg |
466 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || || ||||||||| ||||||| |
|
|
| T |
7754 |
tggtgtccgaagttatagttaatggaacctggaacatacctgcagtaatttcagattttggggacattagagagcgtctcgacgctgtcgtcctacctcg |
7655 |
T |
|
| Q |
467 |
tacacagctcagggatgtgctggtttggaagcactctttggatggaaccttgaattcgaagattgctagctctttcatgcgtcctccatcacaggttct |
565 |
Q |
| |
|
||||| ||||| |||||| |||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||||||| | |||||||||| |
|
|
| T |
7654 |
tacaccgctcatggatgtcctggtttggaagcact-tttggatggaaacttgaattcgaagctagctagctctttcatgcgtcctcaagcacaggttct |
7557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 486 - 564
Target Start/End: Original strand, 128202 - 128280
Alignment:
| Q |
486 |
ctggtttggaagcactctttggatggaaccttgaattcgaagattgctagctctttcatgcgtcctccatcacaggttc |
564 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||| ||| || |||||||||||| |||||||||| |||||||||| |
|
|
| T |
128202 |
ctggtttggatgcactctttggatggagtcttgaattagaaaatggctagctctttcctgcgtcctccttcacaggttc |
128280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 486 - 564
Target Start/End: Original strand, 306019 - 306097
Alignment:
| Q |
486 |
ctggtttggaagcactctttggatggaaccttgaattcgaagattgctagctctttcatgcgtcctccatcacaggttc |
564 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||| ||| || |||||||||||| |||||||||| |||||||||| |
|
|
| T |
306019 |
ctggtttggatgcactctttggatggagtcttgaattagaaaatggctagctctttcctgcgtcctccttcacaggttc |
306097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 10137201 - 10137368
Alignment:
| Q |
44 |
tgaaggtgggttagacatcaaacctacgcgcttgattaacgaggctttaattctgaaattattttgggatataattgcacaggaaacacagtggtctaat |
143 |
Q |
| |
|
|||||||| || |||||||||||||| | |||||||| || ||||| ||| | ||||| ||||||||| |||||||| | || ||||| |||||||| |
|
|
| T |
10137201 |
tgaaggtgttttggacatcaaacctacatgtttgattaatgaagctttgattattaaattgttttgggatttaattgcagaagatacacaatggtctaac |
10137300 |
T |
|
| Q |
144 |
ttattcaagaggcgatatttctcaaacggtcagccctccatgcgctattttaaatcctcggtttggtc |
211 |
Q |
| |
|
||||||| ||| ||| ||||||| |||||||| | |||||||||||| |||||||||||||| |
|
|
| T |
10137301 |
ttattcagattgcgttatctctcaaatggtcagccaagaaagcgctattttaagtcctcggtttggtc |
10137368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 20424785 - 20424952
Alignment:
| Q |
45 |
gaaggtgggttagacatcaaacctacgcgcttgattaacgaggctttaattctgaaattattttgggatataattgc-acaggaaacacagtggtctaat |
143 |
Q |
| |
|
||||||||||| || ||||| |||||||| ||||||||||| ||||| ||||| |||| | ||||||| || |||| ||| || || || |||||||| |
|
|
| T |
20424785 |
gaaggtgggttggatatcaagcctacgcgtttgattaacgaagctttgattcttaaatattcttgggatttacttgctaca-gatactcaatggtctaac |
20424883 |
T |
|
| Q |
144 |
ttattcaagaggcgatatttctcaaacggtcagccctccatgcgctattttaaatcctcggtttggtca |
212 |
Q |
| |
|
| || |||||||| ||||||||||| ||| |||| | ||||||| |||||||| || ||||||||| |
|
|
| T |
20424884 |
cttttaaagaggcgttatttctcaaatggtaagcctagcttgcgctactttaaatcgtctgtttggtca |
20424952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 213
Target Start/End: Complemental strand, 10610054 - 10609885
Alignment:
| Q |
44 |
tgaaggtgggttagacatcaaacctacgcgcttgattaacgaggctttaattctgaaattattttgggatataattgc-acaggaaacacagtggtctaa |
142 |
Q |
| |
|
|||||||||| | || ||||| |||||||| ||| ||||||| ||||| ||| | ||||| | ||||||| ||||||| |||| | || || |||||||| |
|
|
| T |
10610054 |
tgaaggtgggctggatatcaagcctacgcgtttgtttaacgaagctttgattattaaattgtcttgggatttaattgctacag-atactcaatggtctaa |
10609956 |
T |
|
| Q |
143 |
tttattcaagaggcgatatttctcaaacggtcagccctccatgcgctattttaaatcctcggtttggtcag |
213 |
Q |
| |
|
| || |||||||| |||||| |||| ||| |||| | |||| |||||||| || ||||||||||||| |
|
|
| T |
10609955 |
ccttttaaagaggcgttatttcccaaatggtaagcctagcttgcgttattttaagtcttcggtttggtcag |
10609885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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