View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0412_low_98 (Length: 334)
Name: NF0412_low_98
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0412_low_98 |
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Alignment Details
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 78 - 321
Target Start/End: Original strand, 9884102 - 9884345
Alignment:
| Q |
78 |
gagatgaagttgttgtctgacgcacaaggtagtgtctccgtttctgattccagtggtaagatcgtgttgacagttgatgaatttgctgctctaagtggaa |
177 |
Q |
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| T |
9884102 |
gagatgaagttgttgtctgacgcacaaggtagtgtctccgtttctgattccagtggtaagatcgtgttgacagttaatgaatttgctgctctaagtggaa |
9884201 |
T |
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| Q |
178 |
aaatcaatgaatgtgaagatttgattgagaggacagaaacaactgcaatggctcaggtggaagcaatcaacacaagaagaaatgaagtgaacaaaaaagt |
277 |
Q |
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| T |
9884202 |
aaatcaatgaatgtgaagatttgattgagaggacagaaacaactgcaatggctcaggtggaagcaatcaacacaagaagaaatgaagtgaacaaaaaagt |
9884301 |
T |
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| Q |
278 |
cgaagctaatcttcaagcaatcgaagaaataaaagcagcaacag |
321 |
Q |
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| T |
9884302 |
cgaagctaatcttcaagcaatcgaagaaataaaagcagcaacag |
9884345 |
T |
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