View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0415_low_15 (Length: 252)
Name: NF0415_low_15
Description: NF0415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0415_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 14 - 228
Target Start/End: Original strand, 40213966 - 40214180
Alignment:
| Q |
14 |
agatatatatgctttctaaagtaatagttctagatattaaattagtgttggattggatgttttattttttcacaagcaaaaatgatttatcaatattcat |
113 |
Q |
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| T |
40213966 |
agatatatatgctttctaaagtaatagttctagatattaaattagtgttggattggatgttttattttttcacaagcaaaaacgatttatcaatattcat |
40214065 |
T |
|
| Q |
114 |
ttatgctaattctcctgcactgaccctttattatattatttgtatgaatattatttatttctgccatgcatgcagggaacaaattaatgttgaaccggac |
213 |
Q |
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| T |
40214066 |
ttatgctaattctcctgcactgaacctttattatattatttctatgaatattatttatttctgccatgcatgcagggaacaaattaatgttgaaccggac |
40214165 |
T |
|
| Q |
214 |
ccgcattgagtaaga |
228 |
Q |
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| T |
40214166 |
ccgcattgagtaaga |
40214180 |
T |
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