View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0415eco17 (Length: 387)
Name: NF0415eco17
Description: NF0415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0415eco17 |
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Alignment Details
Target: chr8 (Bit Score: 371; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 10 - 384
Target Start/End: Original strand, 45315117 - 45315491
Alignment:
| Q |
10 |
gcagagagtacatgaggaacgtaattgggaatatttacagaaccctaaagtattcatcttgggattccgctcaacaacagcttcaaaatctccctttgaa |
109 |
Q |
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| T |
45315117 |
gcagagagtacatgaggaacgtaattgggaatatttacagaaccctaaagtattcatcttgggattccgctcaacaacagcttcaaaatctccctttgaa |
45315216 |
T |
|
| Q |
110 |
atgggactcatacactgtcaatcaggttctcaaatcacaccctccaatggagaaagcgtggttgttcttcaactgggcttctcgtctcaaagggtttaag |
209 |
Q |
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| T |
45315217 |
atgggactcatacactgtcaatcaggttctcaaatcacaccctccaatggagaaagcgtggttgttcttcaactgggcttctcgtctcaaagggtttaag |
45315316 |
T |
|
| Q |
210 |
cacgaccaattcacttacacaaccatgctagatattttcggtgaagcagggagaatttcatcaatgaaacacgttttcaatcaaatgcatgagaaaggga |
309 |
Q |
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| T |
45315317 |
cacgaccaattcacttacacaaccatgctagatattttcggtgaagcagggagaatttcatcaatgaaacacgttttcaatcaaatgcatgagaaaggga |
45315416 |
T |
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| Q |
310 |
taaagattgattctgttacttacacttcaattatgcattggctttcgacttctgggaatgtggatgaagcaattg |
384 |
Q |
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| T |
45315417 |
taaagattgattctgttacttacacttcaatgatgcattggctttcgacttctgggaatgtggatgaagcaattg |
45315491 |
T |
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