View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0418_low_17 (Length: 251)
Name: NF0418_low_17
Description: NF0418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0418_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 37698132 - 37697894
Alignment:
| Q |
1 |
atttttatacgctccttcatgttagatgtaactctttattcagcatcctgaaagcaacaggtaactcctcactcaaatggatcaatgtgtacaaactctc |
100 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37698132 |
atttttatacgctccatcatgttagatgtaactctttattcagcatcctgaaagcaacaggtaactcctcactcaaatggatcaatgtgtacaaactctc |
37698033 |
T |
|
| Q |
101 |
tacctttcctaaaagtaaattagttcatctcaccactaaatcatctannnnnnnatatgcctatatatatgtcccaacagcaacaagcaaatgaatagaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
37698032 |
tacctttcctaaaagtaaattagttcatctcaccactaaatcatctatttttttatatgcctatatatatgtcccaacagcaacaagcaaatgaatagaa |
37697933 |
T |
|
| Q |
201 |
gaacaagatgatagcatcaaccatgcaacacttcctctc |
239 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||| |
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|
| T |
37697932 |
gaacaagatgatagcatcaaccatgcaacacttcctctc |
37697894 |
T |
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