View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0419_low_16 (Length: 275)
Name: NF0419_low_16
Description: NF0419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0419_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 30 - 248
Target Start/End: Complemental strand, 12023120 - 12022911
Alignment:
| Q |
30 |
ggcttcaggatttgtagcttgactgagggtaattgatgccttgtatggacctccattttcctcctatacnnnnnnnagatttaccaaaacaacaaaggta |
129 |
Q |
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| T |
12023120 |
ggcttcaggatttgtagcttgactgagggtaattgatgccttgtatggacctccattttcctcctatactttttttagatttaccaaaacaacaaaggta |
12023021 |
T |
|
| Q |
130 |
tgttcatggatgaaataaaaaacataaagaatctgaaatctctgaattacggttacaagacgtagcagttaccttacaccgatcaatgcttacaaattcg |
229 |
Q |
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||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12023020 |
tgttcatggatgaaataaaaaacataaagaa---------tctgaattatggttacaagacgtagcagttaccttacaccgatcaatgcttacaaattcg |
12022930 |
T |
|
| Q |
230 |
acatattttcctccgaatt |
248 |
Q |
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||||||||||||||||||| |
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| T |
12022929 |
acatattttcctccgaatt |
12022911 |
T |
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