View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0424_high_20 (Length: 268)
Name: NF0424_high_20
Description: NF0424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0424_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 21614226 - 21614485
Alignment:
| Q |
1 |
tttcaaccactttcaactcaattcaacccaaaacgacgccgtcttcaaacccaaacccaaaacgcatcgccgttttagccttcgaagtggccggagtaat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
21614226 |
tttcaaccactttcaactcaattcaacccaaaacgacaccgtcttcaaacccaaacccaaaacgcatcgccgttttagccttcgaagtcgccggagtaat |
21614325 |
T |
|
| Q |
101 |
gtcgaagcttcttcatctctggcaatcactttccgacgctaatgtaatccgtcttcaaaacgacgtcgttacacttgaaggtatttcgaagctaatctca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21614326 |
gtcgaagcttcttcatctctggcaatcactttccgacgctaacataatccgtcttcaaaacgacgtcgttacacttgaaggtatttcgaagctaatctca |
21614425 |
T |
|
| Q |
201 |
agcgacaagtcgtttttgttaaaactcgccgtcgctgaattttgcgactcgcttcatctc |
260 |
Q |
| |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
21614426 |
agcgacaagtcgtttctgttaaaactcgccgtcgctgaattttgcgactcgcttcgtctc |
21614485 |
T |
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