View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0424_low_34 (Length: 250)

Name: NF0424_low_34
Description: NF0424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0424_low_34
NF0424_low_34
[»] chr1 (91 HSPs)
chr1 (83-151)||(37593676-37593744)
chr1 (87-152)||(34290245-34290310)
chr1 (83-148)||(46252674-46252739)
chr1 (87-152)||(10199404-10199469)
chr1 (87-152)||(7136994-7137059)
chr1 (88-152)||(25479590-25479654)
chr1 (87-147)||(28689448-28689508)
chr1 (87-154)||(6292500-6292567)
chr1 (83-150)||(31517732-31517799)
chr1 (90-152)||(37842354-37842416)
chr1 (85-142)||(8016276-8016333)
chr1 (87-152)||(10854742-10854807)
chr1 (89-154)||(14629964-14630029)
chr1 (103-152)||(26779937-26779986)
chr1 (87-152)||(27140487-27140552)
chr1 (107-152)||(43332493-43332538)
chr1 (88-152)||(4576814-4576878)
chr1 (87-147)||(5886990-5887050)
chr1 (85-152)||(19389910-19389978)
chr1 (105-161)||(26461955-26462011)
chr1 (85-147)||(15784343-15784406)
chr1 (87-146)||(38170686-38170745)
chr1 (85-152)||(38867825-38867892)
chr1 (86-152)||(7218069-7218135)
chr1 (95-153)||(15361048-15361106)
chr1 (87-172)||(30815649-30815738)
chr1 (83-136)||(42397749-42397803)
chr1 (88-130)||(47877140-47877182)
chr1 (107-152)||(5047155-5047200)
chr1 (91-152)||(7262518-7262579)
chr1 (107-148)||(7472324-7472365)
chr1 (103-152)||(12564511-12564560)
chr1 (83-172)||(23373305-23373393)
chr1 (87-152)||(31118052-31118117)
chr1 (87-168)||(48748601-48748682)
chr1 (87-152)||(52190138-52190203)
chr1 (85-152)||(1509959-1510027)
chr1 (83-155)||(4699607-4699679)
chr1 (103-151)||(11893605-11893653)
chr1 (83-171)||(29834897-29834985)
chr1 (88-152)||(30257692-30257756)
chr1 (87-172)||(35707194-35707281)
chr1 (96-144)||(38503470-38503518)
chr1 (83-122)||(3223706-3223745)
chr1 (86-129)||(3224455-3224498)
chr1 (87-154)||(4445715-4445782)
chr1 (88-159)||(4920767-4920838)
chr1 (93-160)||(6279400-6279467)
chr1 (83-154)||(10280656-10280727)
chr1 (82-129)||(10809377-10809424)
chr1 (104-151)||(35590905-35590952)
chr1 (82-152)||(1565526-1565596)
chr1 (103-145)||(11129324-11129366)
chr1 (94-152)||(12564877-12564935)
chr1 (83-125)||(29635383-29635425)
chr1 (87-153)||(43338124-43338190)
chr1 (85-147)||(43722322-43722384)
chr1 (98-152)||(45975699-45975753)
chr1 (109-147)||(51190862-51190900)
chr1 (83-152)||(51695486-51695556)
chr1 (83-172)||(3070082-3070174)
chr1 (83-152)||(3924633-3924702)
chr1 (87-152)||(4202147-4202212)
chr1 (103-152)||(4548730-4548779)
chr1 (88-121)||(4549888-4549921)
chr1 (87-148)||(4622106-4622167)
chr1 (91-152)||(4700066-4700127)
chr1 (83-152)||(4868409-4868478)
chr1 (85-130)||(5276324-5276369)
chr1 (87-152)||(12477283-12477348)
chr1 (87-152)||(12593449-12593514)
chr1 (83-128)||(15579515-15579560)
chr1 (88-149)||(16981933-16981994)
chr1 (87-152)||(24460403-24460468)
chr1 (83-147)||(26185524-26185589)
chr1 (87-152)||(27963366-27963431)
chr1 (95-152)||(28077073-28077130)
chr1 (87-152)||(28909999-28910064)
chr1 (88-145)||(28935873-28935930)
chr1 (95-152)||(32182280-32182337)
chr1 (85-122)||(34278687-34278724)
chr1 (83-152)||(35080061-35080130)
chr1 (87-148)||(35925703-35925764)
chr1 (87-152)||(41195189-41195254)
chr1 (83-152)||(45205077-45205146)
chr1 (85-122)||(47917275-47917312)
chr1 (107-147)||(19092399-19092439)
chr1 (112-152)||(21254768-21254808)
chr1 (86-141)||(27145730-27145785)
chr1 (88-152)||(35017585-35017649)
chr1 (83-152)||(35350645-35350718)
[»] chr8 (52 HSPs)
chr8 (87-172)||(20672739-20672824)
chr8 (84-172)||(33553229-33553317)
chr8 (93-154)||(42215084-42215145)
chr8 (83-154)||(30191133-30191204)
chr8 (110-159)||(11494148-11494197)
chr8 (83-130)||(13000416-13000463)
chr8 (84-151)||(21653091-21653158)
chr8 (83-129)||(2594989-2595035)
chr8 (106-152)||(4762518-4762564)
chr8 (93-154)||(11493972-11494033)
chr8 (87-152)||(11569453-11569518)
chr8 (85-153)||(25869260-25869328)
chr8 (83-147)||(39866726-39866790)
chr8 (85-172)||(14949855-14949942)
chr8 (109-152)||(27028840-27028883)
chr8 (90-129)||(30389131-30389170)
chr8 (91-154)||(33714236-33714299)
chr8 (85-152)||(38421273-38421340)
chr8 (117-172)||(40280253-40280308)
chr8 (87-130)||(41606899-41606942)
chr8 (87-154)||(42215302-42215369)
chr8 (88-134)||(3600735-3600781)
chr8 (88-134)||(14339602-14339648)
chr8 (83-152)||(779053-779122)
chr8 (83-128)||(4281579-4281624)
chr8 (83-152)||(30918122-30918190)
chr8 (83-127)||(32840977-32841022)
chr8 (83-152)||(41620283-41620352)
chr8 (103-152)||(44236835-44236884)
chr8 (88-152)||(2235653-2235717)
chr8 (96-152)||(9956819-9956875)
chr8 (83-151)||(12224891-12224959)
chr8 (88-152)||(27754413-27754477)
chr8 (87-154)||(9540992-9541059)
chr8 (91-154)||(10075551-10075614)
chr8 (87-158)||(12851179-12851250)
chr8 (89-152)||(28769337-28769400)
chr8 (88-154)||(28784793-28784858)
chr8 (90-152)||(29059795-29059857)
chr8 (88-152)||(1930044-1930109)
chr8 (85-130)||(3161617-3161662)
chr8 (87-152)||(5069706-5069771)
chr8 (83-152)||(7918438-7918507)
chr8 (107-152)||(7918789-7918834)
chr8 (87-152)||(37353245-37353310)
chr8 (83-152)||(39551201-39551270)
chr8 (83-152)||(43504760-43504829)
chr8 (88-136)||(11000573-11000621)
chr8 (87-151)||(11795102-11795166)
chr8 (87-155)||(31168020-31168088)
chr8 (84-152)||(31862502-31862570)
chr8 (89-149)||(42370359-42370419)
[»] chr7 (49 HSPs)
chr7 (83-172)||(7244669-7244758)
chr7 (87-170)||(22551401-22551484)
chr7 (83-152)||(12110369-12110438)
chr7 (88-161)||(48917341-48917416)
chr7 (107-154)||(12792579-12792626)
chr7 (75-152)||(529384-529461)
chr7 (85-171)||(34035907-34035994)
chr7 (83-152)||(46825107-46825178)
chr7 (103-152)||(25596042-25596091)
chr7 (87-159)||(6552288-6552360)
chr7 (87-172)||(43250695-43250782)
chr7 (88-152)||(44151477-44151541)
chr7 (85-147)||(21247939-21248002)
chr7 (83-130)||(46082067-46082114)
chr7 (83-130)||(47134749-47134796)
chr7 (86-152)||(4966165-4966231)
chr7 (83-129)||(11048059-11048105)
chr7 (83-141)||(25670578-25670636)
chr7 (83-152)||(9423586-9423655)
chr7 (109-154)||(12792642-12792687)
chr7 (91-152)||(24363601-24363662)
chr7 (88-148)||(29286804-29286864)
chr7 (83-155)||(30316968-30317040)
chr7 (107-154)||(12792514-12792561)
chr7 (83-122)||(20888386-20888425)
chr7 (87-146)||(35267377-35267436)
chr7 (85-136)||(44808183-44808234)
chr7 (109-172)||(5017958-5018023)
chr7 (83-125)||(36537944-36537986)
chr7 (93-172)||(42656482-42656563)
chr7 (87-129)||(43219640-43219682)
chr7 (87-152)||(9038121-9038185)
chr7 (83-128)||(15740403-15740448)
chr7 (107-152)||(18962588-18962633)
chr7 (107-152)||(18965726-18965771)
chr7 (103-152)||(27378840-27378889)
chr7 (83-152)||(33645953-33646021)
chr7 (83-152)||(45859519-45859587)
chr7 (107-152)||(46104583-46104628)
chr7 (91-152)||(47559601-47559662)
chr7 (111-172)||(3836702-3836765)
chr7 (83-127)||(6226148-6226192)
chr7 (94-154)||(7623145-7623205)
chr7 (83-127)||(9872906-9872950)
chr7 (103-171)||(33601127-33601195)
chr7 (88-147)||(33871265-33871322)
chr7 (93-125)||(35007633-35007665)
chr7 (88-152)||(39345480-39345544)
chr7 (83-123)||(39539773-39539813)
[»] chr6 (49 HSPs)
chr6 (87-152)||(33887839-33887904)
chr6 (83-155)||(4420649-4420721)
chr6 (87-152)||(6647396-6647461)
chr6 (85-136)||(6536972-6537023)
chr6 (85-135)||(9027604-9027654)
chr6 (87-145)||(13908479-13908537)
chr6 (90-172)||(31583668-31583750)
chr6 (83-152)||(2112209-2112278)
chr6 (111-172)||(2205610-2205671)
chr6 (83-152)||(3528812-3528881)
chr6 (83-152)||(30863255-30863324)
chr6 (108-159)||(26694880-26694931)
chr6 (107-152)||(835265-835310)
chr6 (87-152)||(5564124-5564189)
chr6 (83-152)||(7931718-7931787)
chr6 (83-152)||(10616533-10616602)
chr6 (83-152)||(20368172-20368241)
chr6 (107-152)||(27894055-27894100)
chr6 (87-152)||(31624099-31624164)
chr6 (87-152)||(32386559-32386624)
chr6 (83-152)||(34403864-34403933)
chr6 (83-148)||(34939526-34939591)
chr6 (83-155)||(2455816-2455888)
chr6 (93-153)||(17241254-17241314)
chr6 (88-152)||(19275633-19275697)
chr6 (104-152)||(20370892-20370940)
chr6 (103-151)||(20512656-20512704)
chr6 (83-155)||(29837077-29837148)
chr6 (83-127)||(33832265-33832309)
chr6 (88-127)||(821833-821872)
chr6 (85-152)||(8364970-8365037)
chr6 (83-130)||(31420976-31421023)
chr6 (87-150)||(34939755-34939818)
chr6 (84-150)||(281841-281907)
chr6 (87-129)||(696634-696676)
chr6 (84-169)||(10031723-10031809)
chr6 (88-130)||(29296292-29296334)
chr6 (114-152)||(31812036-31812074)
chr6 (85-122)||(733171-733208)
chr6 (107-152)||(1497990-1498035)
chr6 (83-128)||(1575928-1575973)
chr6 (107-152)||(13907856-13907901)
chr6 (89-130)||(27909636-27909677)
chr6 (109-154)||(32387073-32387118)
chr6 (87-152)||(33089515-33089580)
chr6 (87-143)||(7785740-7785796)
chr6 (87-155)||(11600870-11600938)
chr6 (96-152)||(13907594-13907650)
chr6 (83-147)||(32577978-32578042)
[»] chr3 (76 HSPs)
chr3 (87-142)||(36139897-36139952)
chr3 (87-142)||(36101587-36101642)
chr3 (85-152)||(36887513-36887580)
chr3 (87-152)||(21367676-21367742)
chr3 (107-172)||(16790394-16790459)
chr3 (83-152)||(37273143-37273212)
chr3 (87-147)||(23808060-23808120)
chr3 (87-155)||(54837030-54837098)
chr3 (89-152)||(20669181-20669244)
chr3 (89-148)||(33883748-33883807)
chr3 (83-146)||(42745053-42745116)
chr3 (87-154)||(52440658-52440725)
chr3 (82-152)||(39602201-39602271)
chr3 (90-152)||(40665438-40665500)
chr3 (87-152)||(24785214-24785279)
chr3 (83-152)||(30573906-30573975)
chr3 (105-154)||(34924552-34924601)
chr3 (83-152)||(52619012-52619081)
chr3 (83-147)||(36200110-36200174)
chr3 (87-155)||(45541577-45541645)
chr3 (83-130)||(3044251-3044298)
chr3 (88-159)||(45432936-45433007)
chr3 (93-152)||(53736122-53736181)
chr3 (109-155)||(2825153-2825199)
chr3 (106-152)||(20502083-20502129)
chr3 (88-153)||(36878753-36878819)
chr3 (103-152)||(2719477-2719526)
chr3 (87-152)||(8933796-8933861)
chr3 (85-130)||(25925773-25925818)
chr3 (88-152)||(35394494-35394559)
chr3 (87-172)||(37825111-37825196)
chr3 (86-143)||(47249481-47249538)
chr3 (83-144)||(47513670-47513731)
chr3 (83-152)||(50600170-50600239)
chr3 (103-171)||(12985357-12985425)
chr3 (103-151)||(13371127-13371175)
chr3 (96-152)||(26320107-26320163)
chr3 (103-163)||(26478943-26479003)
chr3 (83-147)||(29771852-29771916)
chr3 (89-152)||(33965486-33965550)
chr3 (83-123)||(41724250-41724290)
chr3 (85-152)||(1816592-1816659)
chr3 (112-171)||(13413920-13413979)
chr3 (95-154)||(25453863-25453922)
chr3 (103-154)||(34414796-34414847)
chr3 (87-130)||(36445856-36445899)
chr3 (83-130)||(43115087-43115134)
chr3 (89-152)||(51130759-51130822)
chr3 (87-129)||(5391911-5391953)
chr3 (87-129)||(5396229-5396271)
chr3 (87-129)||(39723236-39723278)
chr3 (106-152)||(41633369-41633415)
chr3 (178-224)||(49465780-49465826)
chr3 (87-152)||(1217796-1217861)
chr3 (114-155)||(14145918-14145959)
chr3 (103-152)||(20170720-20170769)
chr3 (83-152)||(21574499-21574568)
chr3 (103-152)||(34382951-34383000)
chr3 (87-151)||(34610801-34610866)
chr3 (89-130)||(34954113-34954154)
chr3 (90-151)||(41671320-41671381)
chr3 (103-172)||(46407906-46407975)
chr3 (87-152)||(54180776-54180841)
chr3 (83-151)||(482784-482852)
chr3 (108-152)||(2071065-2071109)
chr3 (88-152)||(2128255-2128319)
chr3 (89-141)||(5166343-5166395)
chr3 (89-133)||(11040612-11040656)
chr3 (88-136)||(20195030-20195077)
chr3 (93-149)||(21862177-21862233)
chr3 (103-151)||(23793594-23793642)
chr3 (96-152)||(25447250-25447305)
chr3 (85-152)||(33405160-33405228)
chr3 (107-155)||(37138296-37138344)
chr3 (84-152)||(48048975-48049043)
chr3 (87-147)||(50952347-50952407)
[»] chr4 (55 HSPs)
chr4 (89-159)||(28300297-28300367)
chr4 (87-152)||(23819098-23819163)
chr4 (108-152)||(47800632-47800676)
chr4 (83-152)||(2996582-2996651)
chr4 (83-152)||(4471177-4471246)
chr4 (95-152)||(17884077-17884134)
chr4 (87-172)||(21043231-21043316)
chr4 (87-152)||(29263379-29263444)
chr4 (95-152)||(47145971-47146028)
chr4 (87-152)||(52746836-52746901)
chr4 (103-152)||(53673670-53673719)
chr4 (108-171)||(4500836-4500899)
chr4 (85-152)||(46019623-46019690)
chr4 (107-154)||(51630118-51630165)
chr4 (90-152)||(7694009-7694071)
chr4 (90-132)||(24747348-24747390)
chr4 (91-152)||(4798566-4798627)
chr4 (108-161)||(18011871-18011924)
chr4 (103-152)||(18628555-18628604)
chr4 (87-172)||(35743271-35743356)
chr4 (83-152)||(40532586-40532655)
chr4 (103-172)||(5131262-5131335)
chr4 (87-151)||(44249295-44249359)
chr4 (87-130)||(1137743-1137786)
chr4 (88-127)||(8469374-8469413)
chr4 (103-170)||(25548140-25548207)
chr4 (87-152)||(42641635-42641702)
chr4 (87-130)||(43824314-43824357)
chr4 (83-122)||(46401303-46401342)
chr4 (93-152)||(55084483-55084542)
chr4 (86-152)||(825485-825551)
chr4 (114-152)||(2111073-2111111)
chr4 (83-129)||(4691880-4691926)
chr4 (114-152)||(29778804-29778842)
chr4 (110-152)||(30631248-30631290)
chr4 (83-159)||(53155265-53155338)
chr4 (107-152)||(3155612-3155657)
chr4 (107-148)||(14011247-14011288)
chr4 (109-146)||(30377433-30377470)
chr4 (107-152)||(35290203-35290248)
chr4 (89-130)||(42461282-42461323)
chr4 (90-159)||(43932437-43932506)
chr4 (85-122)||(46201387-46201424)
chr4 (83-152)||(46415784-46415853)
chr4 (105-150)||(47118979-47119024)
chr4 (103-152)||(49219148-49219197)
chr4 (87-152)||(52735131-52735195)
chr4 (83-151)||(488118-488186)
chr4 (103-147)||(2592321-2592365)
chr4 (83-151)||(2874616-2874684)
chr4 (107-147)||(17751160-17751200)
chr4 (84-152)||(19250555-19250623)
chr4 (88-128)||(48719388-48719428)
chr4 (83-130)||(50569321-50569369)
chr4 (103-147)||(53792585-53792629)
[»] chr2 (70 HSPs)
chr2 (90-152)||(35379015-35379077)
chr2 (88-154)||(44443328-44443394)
chr2 (83-152)||(14666557-14666626)
chr2 (83-152)||(34652028-34652097)
chr2 (83-148)||(43199776-43199841)
chr2 (87-154)||(680510-680577)
chr2 (87-158)||(12313169-12313240)
chr2 (85-152)||(43910993-43911060)
chr2 (109-152)||(43985021-43985064)
chr2 (83-152)||(9174824-9174894)
chr2 (109-159)||(9595260-9595310)
chr2 (83-152)||(1056121-1056190)
chr2 (106-171)||(3227698-3227763)
chr2 (87-152)||(29316771-29316836)
chr2 (88-152)||(16867748-16867812)
chr2 (83-158)||(15120186-15120261)
chr2 (83-130)||(41809237-41809284)
chr2 (87-154)||(41817175-41817242)
chr2 (83-152)||(26143631-26143701)
chr2 (82-152)||(33942159-33942229)
chr2 (94-152)||(38078413-38078471)
chr2 (83-129)||(44606102-44606148)
chr2 (83-152)||(1939324-1939393)
chr2 (108-161)||(3067396-3067449)
chr2 (87-152)||(7871652-7871717)
chr2 (87-152)||(8017443-8017508)
chr2 (89-154)||(9530726-9530791)
chr2 (83-152)||(32821818-32821887)
chr2 (83-152)||(33941918-33941987)
chr2 (83-152)||(43065442-43065511)
chr2 (83-152)||(43141880-43141949)
chr2 (103-151)||(656789-656837)
chr2 (85-145)||(1893275-1893335)
chr2 (74-130)||(12147488-12147544)
chr2 (98-154)||(12464480-12464536)
chr2 (84-152)||(35485926-35485994)
chr2 (109-152)||(1810673-1810716)
chr2 (96-143)||(7928304-7928351)
chr2 (91-130)||(8820292-8820331)
chr2 (89-152)||(10563556-10563619)
chr2 (103-146)||(12464679-12464722)
chr2 (83-122)||(30538165-30538204)
chr2 (116-159)||(36863650-36863693)
chr2 (87-154)||(42420004-42420071)
chr2 (87-152)||(1625909-1625975)
chr2 (83-169)||(7282988-7283074)
chr2 (88-130)||(11063519-11063561)
chr2 (106-152)||(15977994-15978040)
chr2 (87-152)||(26626882-26626948)
chr2 (90-152)||(35378531-35378593)
chr2 (88-162)||(35993377-35993451)
chr2 (87-152)||(40682390-40682455)
chr2 (87-169)||(41144202-41144284)
chr2 (106-152)||(44590043-44590089)
chr2 (109-154)||(1056371-1056416)
chr2 (83-152)||(8187445-8187514)
chr2 (83-151)||(11488287-11488353)
chr2 (82-154)||(16398121-16398194)
chr2 (91-152)||(19333325-19333386)
chr2 (83-159)||(30552635-30552712)
chr2 (83-128)||(32614940-32614985)
chr2 (87-152)||(33256749-33256814)
chr2 (83-152)||(36415666-36415734)
chr2 (87-152)||(40158727-40158792)
chr2 (83-152)||(42817368-42817437)
chr2 (111-152)||(44644287-44644328)
chr2 (83-128)||(45314901-45314946)
chr2 (87-155)||(6772516-6772584)
chr2 (108-152)||(24097817-24097861)
chr2 (85-149)||(43635095-43635159)
[»] chr5 (55 HSPs)
chr5 (87-152)||(17258879-17258944)
chr5 (88-152)||(11707064-11707128)
chr5 (85-172)||(12242704-12242791)
chr5 (83-158)||(37611207-37611282)
chr5 (83-158)||(37787937-37788012)
chr5 (83-160)||(10125710-10125787)
chr5 (87-152)||(13604845-13604910)
chr5 (87-152)||(36639531-36639596)
chr5 (83-150)||(12459993-12460060)
chr5 (83-152)||(7674657-7674726)
chr5 (83-152)||(10272423-10272492)
chr5 (83-152)||(17368685-17368754)
chr5 (96-152)||(4014429-4014485)
chr5 (87-147)||(12521542-12521602)
chr5 (87-159)||(32408588-32408660)
chr5 (88-152)||(33533536-33533600)
chr5 (83-130)||(12467164-12467211)
chr5 (85-152)||(25461310-25461377)
chr5 (85-172)||(985600-985689)
chr5 (87-152)||(9202743-9202809)
chr5 (87-128)||(499727-499768)
chr5 (83-152)||(2092537-2092606)
chr5 (87-152)||(2568667-2568732)
chr5 (103-152)||(7319020-7319069)
chr5 (83-140)||(8089957-8090014)
chr5 (87-152)||(18543193-18543257)
chr5 (103-152)||(18906351-18906400)
chr5 (87-152)||(21768193-21768258)
chr5 (87-152)||(26209409-26209474)
chr5 (87-152)||(41957447-41957512)
chr5 (88-152)||(5284445-5284509)
chr5 (96-152)||(7984978-7985034)
chr5 (103-151)||(38104869-38104917)
chr5 (102-150)||(38829647-38829695)
chr5 (98-152)||(3237102-3237156)
chr5 (98-152)||(7907890-7907944)
chr5 (87-149)||(32545046-32545108)
chr5 (87-152)||(39105473-39105539)
chr5 (87-128)||(1899187-1899228)
chr5 (83-128)||(11700370-11700415)
chr5 (103-152)||(12425580-12425629)
chr5 (83-152)||(32172662-32172731)
chr5 (85-146)||(32194073-32194134)
chr5 (83-152)||(32897466-32897535)
chr5 (89-130)||(35963272-35963313)
chr5 (87-172)||(36774703-36774788)
chr5 (103-152)||(39594816-39594865)
chr5 (103-147)||(1465032-1465076)
chr5 (87-143)||(8177528-8177584)
chr5 (90-130)||(10303827-10303867)
chr5 (87-159)||(13264101-13264172)
chr5 (110-154)||(18637039-18637083)
chr5 (110-154)||(19460405-19460449)
chr5 (103-151)||(20028502-20028550)
chr5 (107-172)||(29116966-29117033)
[»] scaffold0147 (2 HSPs)
scaffold0147 (83-147)||(4927-4991)
scaffold0147 (83-145)||(12696-12758)
[»] scaffold0089 (1 HSPs)
scaffold0089 (103-151)||(33639-33687)
[»] scaffold0311 (1 HSPs)
scaffold0311 (83-138)||(10609-10664)
[»] scaffold0011 (1 HSPs)
scaffold0011 (105-157)||(14614-14666)


Alignment Details
Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 37593676 - 37593744
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||| |||||||||||||    
T  37593676 acaacttatgacatgttcataagctgttttcagcttattttcataagctcttcaaaatagcttatgaaa 37593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 34290310 - 34290245
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| |||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34290310 cttatgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaa 34290245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 46252674 - 46252739
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 148  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||||    
T  46252674 acaacttatgacatgttcataagttgttttcaggttattttcataagctctccaagatagcttatg 46252739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 10199404 - 10199469
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||  || ||||||||||||||    
T  10199404 cttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaa 10199469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 7136994 - 7137059
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| |||| ||||| |||||||||||||||||||||  || ||||||||||||||||||    
T  7136994 cttatgacatattcataagttattttcagcttattttcataagttctccaagatagcttatgaaaa 7137059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 25479654 - 25479590
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||  | |||||||||||||||    
T  25479654 ttatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaa 25479590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 28689448 - 28689508
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||||||||| || ||||||||||||||||||||||||||||  | |||||||||||||    
T  28689448 cttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttat 28689508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 6292567 - 6292500
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| || ||| |||| ||| |||||||    
T  6292567 cttatgacatgttcataagctgttttcagcttattttcataagctctccaaaatagtttacgaaaata 6292500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 31517732 - 31517799
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaa 150  Q
    |||||| |||||||||||| ||| |||||||||||||||||||||||| || ||||| || |||||||    
T  31517732 acaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagattatgaa 31517799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 37842354 - 37842416
Alignment:
Q  90 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| |||  |||||||||||||||| |||||  |||||||||||||||||||||    
T  37842354 atgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaa 37842416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 8016333 - 8016276
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatag 142  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||| || ||||||||    
T  8016333 aacttatgacatgttcataacttgttttcagcttattttcctaagctctccaagatag 8016276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 10854807 - 10854742
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||| |||||||||||||||||| |||||  |||| |||||  ||||||||    
T  10854807 cttatgacatgttcacaagctgttttcagcttattttcttaagctgttcaggatagtatatgaaaa 10854742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 14629964 - 14630029
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||| ||||||| |||||||||||||||||||| |||||   || ||||||||||||||||||||    
T  14629964 tatgatatgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaata 14630029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 26779937 - 26779986
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  26779937 aagttgttttcaacttattttcataagttcttcaagatagcttatgaaaa 26779986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 27140552 - 27140487
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || |||||||||||||||||||| ||||||| || || |||||||||| ||||    
T  27140552 cttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaa 27140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 43332538 - 43332493
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  43332538 tgttttcagcttattttaataagctcttcaagatagcttatgaaaa 43332493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 4576878 - 4576814
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| | ||||||| |||||||||||||||||||   ||||| ||||||||||||||    
T  4576878 ttatgacatgtttataagttgtgttcagcttattttcataagttattcaatatagcttatgaaaa 4576814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 5886990 - 5887050
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    ||||||||||||||| |||||||||||||||||||||| ||||  || |||||| ||||||    
T  5886990 cttatgacatgttcataagttgttttcagcttattttcgtaagttctccaagatggcttat 5887050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 19389978 - 19389910
Alignment:
Q  85 aacttatgacatgttcacaagttgttttc-agcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| ||||||| ||||||||||  |||||||||||| |||| || ||||||||||||||||||    
T  19389978 aacttatgatatgttcataagttgttttttagcttattttcacaagctctccaagatagcttatgaaaa 19389910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 26461955 - 26462011
Alignment:
Q  105 gttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaac 161  Q
    |||||||||||||||||||||||||| || || ||||||||||||| || |||||||    
T  26461955 gttgttttcagcttattttcataagctctgcaggatagcttatgaagatgatttaac 26462011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 15784406 - 15784343
Alignment:
Q  85 aacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||||||||| |||||||||||||||| |||||||||||| |||  || |||||||||||||    
T  15784406 aacttatgacattgttcacaagttgtttttagcttattttcacaagttctccaagatagcttat 15784343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 38170686 - 38170745
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta 146  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||| ||||||  |||||||    
T  38170686 cttatgacatgttcataagttgttttcagcttgttttcctaagctcttcaaattagctta 38170745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 38867825 - 38867892
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| |||| ||  ||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  38867825 aacttatgatatgtccatcagttgtttttagcttattttcataagttcttcaagataacttatgaaaa 38867892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 7218069 - 7218135
Alignment:
Q  86 acttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||  || || ||||| |||||||||    
T  7218069 acttatgacacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaa 7218135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 15361106 - 15361048
Alignment:
Q  95 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 153  Q
    ||||||| |||||||||||||||||||||||||||| || || ||||||  ||||||||    
T  15361106 atgttcataagttgttttcagcttattttcataagctctccaggatagccaatgaaaat 15361048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 30815649 - 30815738
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagct-----tatgaaaataatttaactttattttatc 172  Q
    ||||||||||||||| ||  |||||||||||||||||||||||  |||||| | ||||     |||||||||| |||||||||||||||||    
T  30815649 cttatgacatgttcataaaatgttttcagcttattttcataagttcttcaaca-agctacttatatgaaaatagtttaactttattttatc 30815738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 42397803 - 42397749
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagctt-attttcataagcacttca 136  Q
    |||||||||| |||||||| |||||||||||||||| |||| |||||||||||||    
T  42397803 acaacttatggcatgttcataagttgttttcagcttaatttccataagcacttca 42397749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 47877182 - 47877140
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  47877182 ttatgacatgctcataagttgttttcagcttattttcataagc 47877140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 5047200 - 5047155
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||    
T  5047200 tgttttcagcttatttccataagctcttcatgatagcttatgaaaa 5047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 7262518 - 7262579
Alignment:
Q  91 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| ||| |||||||| ||||||| || |||| ||||| |||||||||||||||    
T  7262518 tgacatgttcataagctgttttcaccttatttccacaagctcttcaggatagcttatgaaaa 7262579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 7472365 - 7472324
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatg 148  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  7472365 tgttttcagcttattttcataagctctccaagatagcttatg 7472324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 12564511 - 12564560
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||| ||||||  || ||||||||||||||||||    
T  12564511 aagttgttttcagcttatttccataagttctccaagatagcttatgaaaa 12564560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 23373305 - 23373393
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    |||||||||||||||| ||||  | |||||||||||||||   ||||| ||||| ||||||||||||||| |  || |||||||||||||    
T  23373305 acaacttatgacatgtccacatct-gttttcagcttatttctgtaagctcttcaggatagcttatgaaaacagattgactttattttatc 23373393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 31118117 - 31118052
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||  ||||||||||||||||||| ||||||  | ||| | |||||||||||||    
T  31118117 cttatgacatgttcatcagttgttttcagcttatttccataagttcatcagggtagcttatgaaaa 31118052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 48748601 - 48748682
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattt 168  Q
    |||||||||||| || ||||| | || ||||||||  ||||| |  | |||||||||||||||||| |||||||||||||||    
T  48748601 cttatgacatgtccataagttatgtttagcttattaccataaactgtccaagatagcttatgaaaacaatttaactttattt 48748682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 52190203 - 52190138
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| || ||||||  ||||||||||||||||| ||||| || || |||||||||||||||    
T  52190203 cttatgacaagtccacaagccgttttcagcttattttcgtaagctctccatgatagcttatgaaaa 52190138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 1509959 - 1510027
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttc-aagatagcttatgaaaa 152  Q
    |||||||||||||||||  || ||||||||||||||||||||||  ||| | ||||||| |||||||||    
T  1509959 aacttatgacatgttcattagctgttttcagcttattttcataaatactcctaagataggttatgaaaa 1510027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 4699607 - 4699679
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    ||||||||||||||||||| ||| |||||| |||||||||  |||||| || |  ||||| ||||||||||||    
T  4699607 acaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatagtttatgaaaataa 4699679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 11893605 - 11893653
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||||||||||||| ||||| | |||||| |||||||||||||    
T  11893605 aagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 11893653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 29834897 - 29834985
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 171  Q
    |||||||| ||| ||| || ||| | ||||||  |||||| ||||||| || || ||||||||||||||| ||||| ||||||||||||    
T  29834897 acaacttacgacgtgtccataagcttttttcaatttatttccataagctctacatgatagcttatgaaaacaatttgactttattttat 29834985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 30257756 - 30257692
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||| ||| ||||||||||||||||  |||||| || || ||||| |||||||||    
T  30257756 ttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaa 30257692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 35707194 - 35707281
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt--atgaaaataatttaactttattttatc 172  Q
    |||||||||||  ||||||||||||||||| ||||||||||||| || || |||| |||  ||||||| | ||| |||| ||||||||    
T  35707194 cttatgacatgcccacaagttgttttcagcatattttcataagctctacaggataacttacatgaaaacagtttgacttaattttatc 35707281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 38503470 - 38503518
Alignment:
Q  96 tgttcacaagttgttttcagcttattttcataagcacttcaagatagct 144  Q
    |||||| |||||||||||||||||||||||||||  || ||||||||||    
T  38503470 tgttcataagttgttttcagcttattttcataagttctccaagatagct 38503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 3223745 - 3223706
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattt 122  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  3223745 acaacttatgacatgtttataagttgttttcagcttattt 3223706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 3224498 - 3224455
Alignment:
Q  86 acttatgacatgttcacaagttgttttcagcttattttcataag 129  Q
    ||||||||||||| || |||||||| ||||||||||||||||||    
T  3224498 acttatgacatgtccataagttgttctcagcttattttcataag 3224455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 4445782 - 4445715
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||| ||||||||| ||| |||||||| |||||||||| |||| || ||||  ||||||||||||||    
T  4445782 cttataacatgttcagaagctgttttcaacttattttcacaagctctccaagtcagcttatgaaaata 4445715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 4920767 - 4920838
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    |||||||||||||  | |||||||| |||||||||||||||||   ||||||||| ||||| ||||| ||||    
T  4920767 ttatgacatgttcttaggttgtttttagcttattttcataagctactcaagataggttatggaaatagttta 4920838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 6279467 - 6279400
Alignment:
Q  93 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaa 160  Q
    |||||| || |||||||||||||| ||||| ||||||| ||  | ||||||||||||||||| |||||    
T  6279467 acatgtccataagttgttttcagcgtatttccataagctctctaggatagcttatgaaaatagtttaa 6279400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 10280727 - 10280656
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||||||  |||||||| ||| | || ||||||||||||||||||  ||| ||||||||||| |||||||    
T  10280727 acaacttatttcatgttcataagcttttgtcagcttattttcataagttcttgaagatagcttacgaaaata 10280656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 10809424 - 10809377
Alignment:
Q  82 gacaacttatgacatgttcacaagttgttttcagcttattttcataag 129  Q
    |||||||||||||||||| | ||  |||||||||||||||||||||||    
T  10809424 gacaacttatgacatgtttataatatgttttcagcttattttcataag 10809377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 35590905 - 35590952
Alignment:
Q  104 agttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    ||||||||||||||||||| ||||||| || || ||||||||||||||    
T  35590905 agttgttttcagcttatttccataagctctccatgatagcttatgaaa 35590952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 1565526 - 1565596
Alignment:
Q  82 gacaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| |||||||||||| || ||| |||||||||||||||||||| ||| || ||| |||| ||| |||||    
T  1565526 gacagcttatgacatgtgcataagctgttttcagcttattttcatgagctctccaaaatagattaagaaaa 1565596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 11129366 - 11129324
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagctt 145  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||    
T  11129366 aagttgttttcagtttattttcataagcatttcaggatagctt 11129324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 12564877 - 12564935
Alignment:
Q  94 catgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| || ||| |||||||||||||||| | ||||||||  |||||||||||||||||    
T  12564877 catgtccataagctgttttcagcttatttccgtaagcactaaaagatagcttatgaaaa 12564935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 29635425 - 29635383
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttca 125  Q
    |||| |||||||||||| | |||||||||||||||||||||||    
T  29635425 acaagttatgacatgtttataagttgttttcagcttattttca 29635383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 43338190 - 43338124
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 153  Q
    ||||||||||||||| ||  | |||||||| ||||||||||||| || || | ||||||||||||||    
T  43338190 cttatgacatgttcataatctattttcagcctattttcataagctctccatgttagcttatgaaaat 43338124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 43722322 - 43722384
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    ||||||||||||||||  | ||||||||||||||||||| |||||| ||  || |||||||||    
T  43722322 aacttatgacatgttcttatgttgttttcagcttatttttataagctctcaaatatagcttat 43722384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 45975753 - 45975699
Alignment:
Q  98 ttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| ||| ||||||||||||||||||||||   || ||||||||||||||||||    
T  45975753 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaa 45975699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 51190900 - 51190862
Alignment:
Q  109 ttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  51190900 ttttcagcttattttcataagttcttcaagatagcttat 51190862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 51695486 - 51695556
Alignment:
Q  83 acaacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| |||| ||||| ||| | ||||||||||||||||||||   || ||||||||||||||||||    
T  51695486 acaacttatcacattgttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaa 51695556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 3070082 - 3070174
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattt-tcataagcacttcaagatagcttatgaaaataat--ttaactttattttatc 172  Q
    ||||||||||||||||||| ||| ||||||||||||| || | |||||  || | | |||||||||||||| ||   ||||||||||||||||    
T  3070082 acaacttatgacatgttcataagctgttttcagcttaattattataagttctcccaaatagcttatgaaaacaacaattaactttattttatc 3070174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 3924702 - 3924633
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| |||||| ||||| | ||||||||||| |||||||| ||||| | ||||| |||||||||| ||||    
T  3924702 acaatttatgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaa 3924633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 4202147 - 4202212
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || ||| | |||||||||||||||| ||||| || | ||||||||| ||||||    
T  4202147 cttatgacatgtccataagctattttcagcttattttcgtaagctctgccagatagcttttgaaaa 4202212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 4548779 - 4548730
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| |||||||||||  |||| || ||||||||||||||||||    
T  4548779 aagttgtttttagcttattttctgaagctctccaagatagcttatgaaaa 4548730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 4549921 - 4549888
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttatt 121  Q
    |||||||||||||| |||||||||||||||||||    
T  4549921 ttatgacatgttcataagttgttttcagcttatt 4549888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 4622167 - 4622106
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 148  Q
    |||||||||||| || ||| |||||| |||||||||||| |||| || ||||||||| ||||    
T  4622167 cttatgacatgtccataagctgtttttagcttattttcacaagctctccaagatagcatatg 4622106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 4700066 - 4700127
Alignment:
Q  91 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| |  ||||||||||||||||||||||||||| || || ||||| |||| ||||    
T  4700066 tgacatgtttaggagttgttttcagcttattttcataagctctccaggatagtttataaaaa 4700127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 4868478 - 4868409
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||  | |||||||||||| ||||||| |||||||  ||||| |||| ||| |||||    
T  4868478 acaacttatgacatgtcaataagttgttttcaacttatttacataagcttttcaaaatagtttacgaaaa 4868409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 5276369 - 5276324
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||||||||||| ||||||||||||  |||||||| |||||    
T  5276369 aacttatgacatgttcataagttgttttcaagttattttcttaagc 5276324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 12477283 - 12477348
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || |||||||||||||||||||| ||||  | || || |||||||||| ||||    
T  12477283 cttatgacatgtccataagttgttttcagcttatttccatacactctccatgatagcttattaaaa 12477348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 12593449 - 12593514
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| |||||| || ||||||||||||| ||  || ||||||| || ||||||||||||||||||    
T  12593449 cttataacatgtgcataagttgttttcaggtttattccataagcgctccaagatagcttatgaaaa 12593514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 15579560 - 15579515
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataa 128  Q
    |||||||||||||||| || |||||||| ||||||||||| |||||    
T  15579560 acaacttatgacatgtccataagttgttctcagcttatttccataa 15579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 16981933 - 16981994
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 149  Q
    ||||||||||| || |||||||||| |||||||||  |||||| || || ||||||||||||    
T  16981933 ttatgacatgtccataagttgtttttagcttatttatataagctctccatgatagcttatga 16981994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 24460403 - 24460468
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||| ||| ||||| |||||||||||  ||||| ||  | |||||||||||||||    
T  24460403 cttatgacatgttcataagctgtttccagcttatttttgtaagctctcaaggatagcttatgaaaa 24460468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 26185589 - 26185524
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagctta-ttttcataagcacttcaagatagcttat 147  Q
    |||||||||||||||| || |||||||||||| | || ||||| ||||| || |||||||||||||    
T  26185589 acaacttatgacatgtgcataagttgttttcaacatatttttcgtaagctctccaagatagcttat 26185524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 27963366 - 27963431
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || |||||||||| |||||||||  |||||| || ||  ||||||||||||||    
T  27963366 cttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaa 27963431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 28077073 - 28077130
Alignment:
Q  95 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||| ||||||||||||||||||||  |||||| ||  || ||||||||||||||    
T  28077073 atgttcataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaaa 28077130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 28910064 - 28909999
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| |||| | |||||||||||| |||||||||||||   ||||| | |||||||||||||    
T  28910064 cttatgacttgtttataagttgttttcatcttattttcataacttcttcatgctagcttatgaaaa 28909999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 28935873 - 28935930
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt 145  Q
    ||||||||||| || ||||| |||| ||||||||| ||||||| ||||| ||||||||    
T  28935873 ttatgacatgtccataagttttttttagcttatttccataagctcttcaggatagctt 28935930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 32182337 - 32182280
Alignment:
Q  95 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||| ||||| |||||||||||||| | ||||| ||||||||||| || ||||||    
T  32182337 atgttcataagtttttttcagcttatttccttaagctcttcaagatagattttgaaaa 32182280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 34278687 - 34278724
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattt 122  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  34278687 aacttatgacatgttcataggttgttttcagcttattt 34278724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 35080061 - 35080130
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||| ||| |||||| |||||||||  | |||| || || ||||||| |||||||    
T  35080061 acaacttatgacatgttcataagctgttttgagcttatttcgacaagctctccatgatagctcatgaaaa 35080130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 35925764 - 35925703
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 148  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||| | || || |||||||||||    
T  35925764 cttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagcttatg 35925703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 41195189 - 41195254
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| || | ||| | |||||||||||||||||||||  || |||||||| |||||||||    
T  41195189 cttatgacattttaataagcttttttcagcttattttcataagttctccaagatagtttatgaaaa 41195254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 45205146 - 45205077
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| |||| |  |||||||||||||||||||| ||| | | || || |||||||||||||||    
T  45205146 acaacttatgatatgtccctaagttgttttcagcttatttccatgaactctacatgatagcttatgaaaa 45205077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 47917312 - 47917275
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattt 122  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  47917312 aacttatgacatgttcataagttgttttcaacttattt 47917275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 19092399 - 19092439
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||||| ||||||||||||||| ||||| ||||||||||    
T  19092399 tgttttcaccttattttcataagctcttcaggatagcttat 19092439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 21254768 - 21254808
Alignment:
Q  112 tcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||| || |||||||||||| |||||    
T  21254768 tcagcttattttcataagctctccaagatagcttaagaaaa 21254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 27145730 - 27145785
Alignment:
Q  86 acttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagata 141  Q
    ||||||||||| ||||| ||||| |||||||||||||||||||||  ||||||||||    
T  27145730 acttatgacattgttcataagtt-ttttcagcttattttcataagttcttcaagata 27145785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 35017649 - 35017585
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| || ||||| |||||| ||||||| ||||||| || || || ||||||||||||    
T  35017649 ttatgacatgtccataagttattttcaacttatttccataagctctccaggacagcttatgaaaa 35017585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 35350718 - 35350645
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagct----tattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| || ||| |||||||||||    ||||| ||||||| ||| | |||||||||||||||    
T  35350718 acaacttatgacatgtccataagctgttttcagctagcttatttacataagctctttaggatagcttatgaaaa 35350645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 172
Target Start/End: Complemental strand, 20672824 - 20672739
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| || || |||||||||| |||| | ||| |||||||||||||    
T  20672824 cttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaacagtttgactttattttatc 20672739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 33553317 - 33553229
Alignment:
Q  84 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    ||||||||||||||| |  ||| ||||  |||||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  33553317 caacttatgacatgtccctaagctgttcccagcttatttccataagctcttcaagatagcttatgaaaacaatttgactttattttatc 33553229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 42215084 - 42215145
Alignment:
Q  93 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||| |||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  42215084 acatgttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaaata 42215145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 30191133 - 30191204
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||| || |||| |||||||||| ||||||    
T  30191133 acaacttatgacatgttcaaaacttgttttcagcttatttccataaacatttcaggatagcttatcaaaata 30191204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 11494197 - 11494148
Alignment:
Q  110 tttcagcttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  11494197 tttcagcttattttcataagctcttcaagatagcttatgaaaatagttta 11494148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 13000416 - 13000463
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  13000416 acaacttatgacatgtccacaagttgttttcagcttatttccataagc 13000463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 21653158 - 21653091
Alignment:
Q  84 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||||| ||||| ||| | |||||||||||||||||||||| || |||||||||| ||||||    
T  21653158 caacttatgacacgttcataagctattttcagcttattttcataagctctccaagatagctaatgaaa 21653091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 2594989 - 2595035
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataag 129  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  2594989 acaacttatgacatgttcataagttgttttcagcttattctcataag 2595035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 4762564 - 4762518
Alignment:
Q  106 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  4762564 ttgttttcagcttatttacataagctcttcaagatagcttatgaaaa 4762518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 11494033 - 11493972
Alignment:
Q  93 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||| ||| ||| ||||||||| |||||||||| |||||||||||| ||||||||||    
T  11494033 acatgttcataagctgtgttcagcttactttcataagctcttcaagatagcgtatgaaaata 11493972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 11569453 - 11569518
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || ||||||||||||||||||||||| || | || || |||||||||||||||    
T  11569453 cttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaa 11569518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 25869260 - 25869328
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 153  Q
    |||||||||||||| || |||||||||||||||||||| ||||| | || || |||||| |||||||||    
T  25869260 aacttatgacatgtccataagttgttttcagcttatttccataaactctccatgatagcctatgaaaat 25869328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 39866726 - 39866790
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||||||  ||||| || ||| ||||||||| |||||||||||||| ||||||||||||||||    
T  39866726 acaacttatagcatgtccataagctgttttcagtttattttcataagctcttcaagatagcttat 39866790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 14949942 - 14949855
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    |||||||||||||| || ||| ||||||||||||||||  |||| | ||| | ||||||||||||||| | ||| ||| |||||||||    
T  14949942 aacttatgacatgtccataagctgttttcagcttatttctataatctctttaggatagcttatgaaaagagtttgactctattttatc 14949855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 152
Target Start/End: Complemental strand, 27028883 - 27028840
Alignment:
Q  109 ttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  27028883 ttttcagcttattttcataagctctccaagatagcttatgaaaa 27028840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 30389170 - 30389131
Alignment:
Q  90 atgacatgttcacaagttgttttcagcttattttcataag 129  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  30389170 atgacatgttcataagttgttttcagcttattttcataag 30389131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 33714236 - 33714299
Alignment:
Q  91 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||| |||||| ||| ||||||||||||||||| |||||| || | ||||||||||||||||||    
T  33714236 tgacttgttcataagctgttttcagcttatttttataagctctcccagatagcttatgaaaata 33714299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 38421340 - 38421273
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||| || ||||||||||||||||| || || |||  |||||||||||||| ||||||    
T  38421340 aacttatgacatgtccataagttgttttcagcttacttacacaagatcttcaagatagcttttgaaaa 38421273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 40280253 - 40280308
Alignment:
Q  117 ttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    |||||| ||||||| |||| |||||||||||||||| ||||| |||||||||||||    
T  40280253 ttatttccataagctcttctagatagcttatgaaaacaattttactttattttatc 40280308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 130
Target Start/End: Original strand, 41606899 - 41606942
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||||||||| |||||||||||||||||||| |||||||    
T  41606899 cttatgacatgttcaaaagttgttttcagcttatttccataagc 41606942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 42215302 - 42215369
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||||| |||||| ||| |||||||||||||||| ||||||| || || |||||| ||||||||||    
T  42215302 cttatgacttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaata 42215369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 3600735 - 3600781
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcactt 134  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||    
T  3600735 ttatgacatgtccataagttgttttcaacttattttcataagcactt 3600781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 14339602 - 14339648
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcactt 134  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||    
T  14339602 ttatgacatgtccataagttgttttcaacttattttcataagcactt 14339648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 779053 - 779122
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||| |||||||||||| ||||||||  ||  | || |||||||| |||||||||    
T  779053 acaacttatgacatgttcataagttgttttcatcttattttggtacactctccaagatagtttatgaaaa 779122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 4281624 - 4281579
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataa 128  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||    
T  4281624 acaacatatgacatgttcataagttgttttcatcttattttcataa 4281579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 30918190 - 30918122
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||| |||||| |||| |||||||||||||||||||| ||||||| || ||||| | ||||||||||    
T  30918190 acaacttgtgacat-ttcataagttgttttcagcttatttccataagctctccaagaaaacttatgaaaa 30918122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 32840977 - 32841022
Alignment:
Q  83 acaacttatgacat-gttcacaagttgttttcagcttattttcata 127  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||    
T  32840977 acaacttatgacattgttcataagttgttttcagcttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 41620283 - 41620352
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| ||||||||||| || ||||||||||| ||||||||||| |||| |  ||||||||||||| ||||    
T  41620283 acaaattatgacatgtccataagttgttttccgcttattttcaaaagctcgacaagatagcttataaaaa 41620352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 44236835 - 44236884
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| |||||||||||||||||||||| || ||| ||||||||||||||    
T  44236835 aagttattttcagcttattttcataagctctccaatatagcttatgaaaa 44236884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 2235653 - 2235717
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||| |||| ||||| |||| |||| ||||||| ||| |||||| ||||||||||    
T  2235653 ttatgacatgttcataagtcgtttttagctcatttccataagctctttaagataccttatgaaaa 2235717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 9956819 - 9956875
Alignment:
Q  96 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||| |||| ||||||||||||||||||||||  || |||||||| |||||||||    
T  9956819 tgttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaa 9956875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 12224891 - 12224959
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||||||||| ||  |||| ||||||||||||||| || ||| ||||| ||| ||||||||||    
T  12224891 acaacttatgacatgtccatcagtttttttcagcttatttttatgagctcttcaggatggcttatgaaa 12224959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 27754477 - 27754413
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| | | ||||||  |||||||||||||||||||| || ||| ||||||||||||||    
T  27754477 ttatgacatgattataagttgcgttcagcttattttcataagctctccaaaatagcttatgaaaa 27754413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 9540992 - 9541059
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||||||||| || || |||| ||||||||||||||| |||| ||  | |||||||||||||||||    
T  9540992 cttatgacatgtccataatttgtgttcagcttattttcaaaagctctctaggatagcttatgaaaata 9541059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 10075551 - 10075614
Alignment:
Q  91 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||| ||||| || ||| ||||||||||||||||| ||  | |||||||||||||||||    
T  10075551 tgacatgttgacaagctgcttttagcttattttcataagctctctaggatagcttatgaaaata 10075614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 12851250 - 12851179
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 158  Q
    ||||| ||||||||| ||| ||||||| |||||||||||||||| ||  | || |||||||||||| |||||    
T  12851250 cttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaacaattt 12851179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 28769337 - 28769400
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| |||| || |||||||||||||||||||| ||||| | || ||| ||||||||||||||    
T  28769337 tatgatatgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaa 28769400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 28784793 - 28784858
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||||||||||| ||| | ||||||||||||||| | |||| ||  |||||||||||||||||||    
T  28784793 ttatgacatgttcataagct-ttttcagcttatttttacaagctctctaagatagcttatgaaaata 28784858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 29059795 - 29059857
Alignment:
Q  90 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| | ||||||||||| |||| || || || | ||||||||||||||||||||    
T  29059795 atgacatgttcatatgttgttttcagattatgttaatgagtatttcaagatagcttatgaaaa 29059857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 1930109 - 1930044
Alignment:
Q  88 ttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| ||||| ||| ||||||||||||||||||| |||  |  ||||||||||||||||||    
T  1930109 ttatgacattgttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaa 1930044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 3161617 - 3161662
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||||||||||| ||  ||||||||||||||||| ||||||    
T  3161617 aacttatgacatgttcataaaatgttttcagcttatttttataagc 3161662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 5069771 - 5069706
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| ||||||||| ||||  ||||||||||||||||||||||  |  |||||| ||||||||||    
T  5069771 cttataacatgttcataagtcattttcagcttattttcataagctttcgaagatatcttatgaaaa 5069706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 7918438 - 7918507
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| |||||||||| ||| ||||| || |||||||  |||||| || |||||||||||| |||||    
T  7918438 acaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaaa 7918507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 7918789 - 7918834
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| || |||| || ||||||||||||||||||    
T  7918789 tgttttcagcttatttccacaagctctacaagatagcttatgaaaa 7918834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 37353245 - 37353310
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| |||| ||  ||||||||| |||||||||||||| ||  ||||||||||| |||||    
T  37353245 cttatgacatattcataaactgttttcagattattttcataagctctcaaagatagcttaagaaaa 37353310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 39551201 - 39551270
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| || ||| |||||| | |||||||| |||||| || || || ||||||||||||    
T  39551201 acaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaa 39551270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 43504829 - 43504760
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| ||| |||| | ||| |||||||||||||||| ||||||  || ||||||||||||| ||||    
T  43504829 acaacttacgacttgtttataagctgttttcagcttatttccataagttctccaagatagcttataaaaa 43504760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 11000573 - 11000621
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttca 136  Q
    ||||||| |||||| ||||||| |||||||||||| ||||||| |||||    
T  11000573 ttatgacttgttcataagttgtcttcagcttatttccataagctcttca 11000621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 11795166 - 11795102
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||||| || ||  |||||||||||||||| ||||||| || ||  |||||||||||||    
T  11795166 cttatgacatgtccataacctgttttcagcttatttccataagctctccataatagcttatgaaa 11795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 31168088 - 31168020
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    ||||||||||| ||| ||  | ||||||||||| |||||||||| |||| ||||| |||||| ||||||    
T  31168088 cttatgacatgctcataaacttttttcagcttactttcataagctcttctagataccttatgcaaataa 31168020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 31862570 - 31862502
Alignment:
Q  84 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| | | || ||| |||||||||||||||||||||||| ||  | |||| ||||||||||    
T  31862570 caacttatgacctatgcataagctgttttcagcttattttcataagctctctaggataacttatgaaaa 31862502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 42370359 - 42370419
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 149  Q
    ||||||||||  ||||  |||||||||||||||| ||||| | ||||| ||||||||||||    
T  42370359 tatgacatgtctacaaactgttttcagcttatttccataaactcttcatgatagcttatga 42370419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 7244758 - 7244669
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||| || ||| |||||||||||||| | ||| ||||| |||||||    
T  7244758 acaatttatgacatgctcataagttgttttcagcttattttcataagctctccaatatagcttatgaaaacagtttgactttcttttatc 7244669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 22551401 - 22551484
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttatttta 170  Q
    ||||||||||||||| | |||||||||||||||||| ||||||| || ||||||  |||||||||| ||||| |||||||||||    
T  22551401 cttatgacatgttcaaatgttgttttcagcttatttacataagctctccaagattacttatgaaaagaatttgactttatttta 22551484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 12110438 - 12110369
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||||||  |||||| || |||||||||||||  |||||||||||||||||||||    
T  12110438 acaacttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaa 12110369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 48917341 - 48917416
Alignment:
Q  88 ttatgacatgttcacaagttgtttt--cagcttattttcataagcacttcaagatagcttatgaaaataatttaac 161  Q
    |||||||||||||||||||||| ||  |||||||||||||||||| || |||||||||||||||||| || |||||    
T  48917341 ttatgacatgttcacaagttgtgtttccagcttattttcataagctctccaagatagcttatgaaaacaacttaac 48917416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 12792579 - 12792626
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  12792579 tgttttcagcttattttcataagctcttcaagatagcttatgaaaata 12792626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 529461 - 529384
Alignment:
Q  75 tattttggacaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| ||| ||||||||||| ||||| ||| |||||||| | ||||||||||||| || ||||||||||||||||||    
T  529461 tatttgggagaacttatgacaagttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaa 529384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 34035994 - 34035907
Alignment:
Q  85 aacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 171  Q
    |||||||||||| ||||| |||||||||||| |||||||||  |||  ||  ||||||||||||||||| ||||||||||||| ||||    
T  34035994 aacttatgacattgttcataagttgttttcaacttattttcgcaagttctctaagatagcttatgaaaacaatttaactttatattat 34035907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 46825178 - 46825107
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttc-agcttattt-tcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| ||| |||||||||  ||||||||| ||||||||||| ||||||||||||||||||    
T  46825178 acaacttatgacatgtccacgagttgttttttagcttatttctcataagcactccaagatagcttatgaaaa 46825107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 25596091 - 25596042
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  25596091 aagttgttttcaacttattttcataagctctccaagatagcttatgaaaa 25596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 6552288 - 6552360
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    |||||||||| |||| ||| |||||||||||||||||||||| | || || ||||| ||||||||||| ||||    
T  6552288 cttatgacatattcataagctgttttcagcttattttcataaactctgcatgatagtttatgaaaatagttta 6552360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 43250695 - 43250782
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 172  Q
    ||||||||||||||  ||||||||||||| |||| ||||||||| || ||| |||||||||  |||||  | ||||||||||||||||    
T  43250695 cttatgacatgttcgtaagttgttttcagtttatattcataagctctccaaaatagcttatacgaaaaacaattaactttattttatc 43250782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 44151477 - 44151541
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| || ||| |||||||||||||||| |||||||  |||||||||| |||||||||    
T  44151477 ttatgacatgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaa 44151541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 21248002 - 21247939
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttca-taagcacttcaagatagcttat 147  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||| || |||||||| ||||    
T  21248002 aacttatgacatgttcataagttgttttaagcttattttcagtaagctctccaagataggttat 21247939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 46082114 - 46082067
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    |||||||||||||||  || ||||||||||||||||||||||||||||    
T  46082114 acaacttatgacatgaccataagttgttttcagcttattttcataagc 46082067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 47134749 - 47134796
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||    
T  47134749 acaacttatgacacgtccataagttgttttcagcttattttcataagc 47134796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 4966231 - 4966165
Alignment:
Q  86 acttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| |||| || ||||||||||||| |||||| ||||||| ||||| ||| |||||||||||    
T  4966231 acttatgatatgtccataagttgttttcagtttatttccataagctcttcaggatggcttatgaaaa 4966165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 11048105 - 11048059
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataag 129  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  11048105 acaacttatgacatgttcataagctgttttcagcttattctcataag 11048059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 25670578 - 25670636
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagata 141  Q
    ||||||||||||||||| | || |||||||||||||||||||| |||| || |||||||    
T  25670578 acaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaagata 25670636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 9423586 - 9423655
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| |||||||||||||| ||||||||||||||||||||  | |||| || || |||||||||| ||||    
T  9423586 acaatttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaa 9423655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 12792642 - 12792687
Alignment:
Q  109 ttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||||||||||| |||| || |||||||||||||||||||||||    
T  12792642 ttttcagcttatttccatatgctcttcaagatagcttatgaaaata 12792687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 24363601 - 24363662
Alignment:
Q  91 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| || |||||||||||||||||||| ||||| | || || |||||||||||||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaa 24363662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 29286864 - 29286804
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 148  Q
    ||||||||||||||  ||||||||||||||||||| |||||||  ||||| ||| ||||||    
T  29286864 ttatgacatgttcatcagttgttttcagcttatttacataagcttttcaaaataacttatg 29286804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 30317040 - 30316968
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    ||||||||| | ||||| | ||| |||||||| ||||||||| || ||| ||||||||| |||||||||||||    
T  30317040 acaacttataaaatgttaataagctgttttcaacttattttcgtatgcatttcaagataccttatgaaaataa 30316968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 12792514 - 12792561
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||| |||||||||||  |||||| |||||||||||||||||||||||    
T  12792514 tgttatcagcttatttcaataagctcttcaagatagcttatgaaaata 12792561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 20888386 - 20888425
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattt 122  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  20888386 acaacttatgccatgttcataagttgttttcagcttattt 20888425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 35267436 - 35267377
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta 146  Q
    ||||||||||||||| | ||||||||||||||||||  |||||| || ||||||| ||||    
T  35267436 cttatgacatgttcataggttgttttcagcttatttctataagctctccaagataactta 35267377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 44808234 - 44808183
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttca 136  Q
    |||||||||||||| || ||  |||||||||||||||||||||||| |||||    
T  44808234 aacttatgacatgtccataacctgttttcagcttattttcataagcccttca 44808183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 5017958 - 5018023
Alignment:
Q  109 ttttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 172  Q
    |||||||||||||| |||||||  |||||||||||||||  || | |||||| |||||||||||||    
T  5017958 ttttcagcttatttccataagcttttcaagatagcttataagagagtaatttgactttattttatc 5018023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 36537986 - 36537944
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttca 125  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||    
T  36537986 acaacttatgacatgttcataagttgtttttagctttttttca 36537944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 42656563 - 42656482
Alignment:
Q  93 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 172  Q
    ||||||||| ||  ||||| | |||||||||||||||| || |||||||||||||   ||||| |||| |||||||||||||    
T  42656563 acatgttcataaaatgtttgcggcttattttcataagctctccaagatagcttatacaaaaatgatttgactttattttatc 42656482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 43219640 - 43219682
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataag 129  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||    
T  43219640 cttatgacatgttcataagctgttttcagcttattctcataag 43219682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 9038185 - 9038121
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||| || |||||||||||||||||||| |||  || || ||||| |||||||||    
T  9038185 cttatgacatgttcataa-ttgttttcagcttattttcacaagttctccatgatagtttatgaaaa 9038121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 15740403 - 15740448
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataa 128  Q
    ||||||||||||||||||| ||| |||||| | |||||||||||||    
T  15740403 acaacttatgacatgttcataagctgtttttaacttattttcataa 15740448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 18962588 - 18962633
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| ||||||||||||||  || ||||||||||||||||||    
T  18962588 tgttttcaccttattttcataaggcctccaagatagcttatgaaaa 18962633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 18965726 - 18965771
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| ||||||||||  || ||||||||||||||||||    
T  18965726 tgttttcagcttgttttcataagacctccaagatagcttatgaaaa 18965771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 27378840 - 27378889
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||| |||||||||||||| || || ||||| |||||||||    
T  27378840 aagttgttttcagtttattttcataagctctccaggatagtttatgaaaa 27378889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 33645953 - 33646021
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||  | |||||||||| || |||||| ||||||| | || ||||||||||||||||    
T  33645953 acaacttatgacatgtctataagttgtttttaggttatttccataagctc-tccagatagcttatgaaaa 33646021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 45859519 - 45859587
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| ||||||||||||| | ||||||||||||||||||  |||||| ||||| |||||  ||||||||    
T  45859519 acaacatatgacatgttcata-gttgttttcagcttatttctataagctcttcatgatagtctatgaaaa 45859587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 46104583 - 46104628
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| |||||||||||||||||| |||||  ||||||||||||||    
T  46104583 tgtttccagcttattttcataagctcttcagcatagcttatgaaaa 46104628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 47559601 - 47559662
Alignment:
Q  91 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| ||||||||||| ||| |||||||||||  || ||| ||| ||||||||||    
T  47559601 tgacatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaa 47559662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 3836702 - 3836765
Alignment:
Q  111 ttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 172  Q
    |||| ||||||||||| ||| || |||||||||||||  |||||| ||||||||| ||||||||    
T  3836702 ttcaacttattttcattagctctccaagatagcttatacgaaaatcatttaacttgattttatc 3836765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 6226148 - 6226192
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcata 127  Q
    |||||| ||| |||| ||| |||||||||||||||||||||||||    
T  6226148 acaactaatgtcatgctcataagttgttttcagcttattttcata 6226192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 7623205 - 7623145
Alignment:
Q  94 catgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||| || ||||||||||  |||||||||| ||| | ||||||||||| |||||||||||    
T  7623205 catgtccataagttgtttttggcttattttcgtaaactcttcaagatagtttatgaaaata 7623145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 9872950 - 9872906
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcata 127  Q
    |||||||||||||||| || ||||||||| ||||| |||||||||    
T  9872950 acaacttatgacatgtccataagttgtttccagctcattttcata 9872906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 33601127 - 33601195
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 171  Q
    |||||||||| ||||||||||||||| | |||    |||||||||||||| | ||| ||||||||||||    
T  33601127 aagttgtttttagcttattttcataaactctttgcaatagcttatgaaaacagtttgactttattttat 33601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 33871322 - 33871265
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||||||||||| |||||||||| |||||||||  ||| || || |||||||||||||    
T  33871322 ttatgacatgttcataagttgttttgagcttattt--atatgctctccaagatagcttat 33871265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 35007665 - 35007633
Alignment:
Q  93 acatgttcacaagttgttttcagcttattttca 125  Q
    ||||||||| |||||||||||||||||||||||    
T  35007665 acatgttcataagttgttttcagcttattttca 35007633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 39345544 - 39345480
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| || |||||| ||||||||||||| ||||||  | ||| |||||||| ||||||    
T  39345544 ttatgacatgtccataagttgctttcagcttatttccataaggtcgtcaggatagcttttgaaaa 39345480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 39539773 - 39539813
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttatttt 123  Q
    |||||||||||||||| || ||| |||||||||||||||||    
T  39539773 acaacttatgacatgtccataagctgttttcagcttatttt 39539813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 33887904 - 33887839
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| |||| |||||||||||||||    
T  33887904 cttatgacatgttcacaagttgttttcaacttatttccataagcatttcaggatagcttatgaaaa 33887839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 4420721 - 4420649
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    |||| |||||||||||||| ||| |||||||||||||||| ||||||| || |||||||||||| ||||||||    
T  4420721 acaaattatgacatgttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaataa 4420649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 6647461 - 6647396
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||| ||  |||||||||||||||||    
T  6647461 cttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaa 6647396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 6537023 - 6536972
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttca 136  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||| |||||    
T  6537023 aacttatgacatgttcataagttgttttcagcttatttccataagctcttca 6536972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 9027654 - 9027604
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttc 135  Q
    |||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  9027654 aacttatgacatgtccataagttgttttcagcttattttcataagctcttc 9027604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 13908537 - 13908479
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt 145  Q
    ||||||||||||||  ||| |||||||||||||||||||||||| ||||| ||||||||    
T  13908537 cttatgacatgttcgtaagctgttttcagcttattttcataagctcttcatgatagctt 13908479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 31583750 - 31583668
Alignment:
Q  90 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    ||||||||| || |||||||||||| ||||||| |||||||  |||  ||||||||||||||| ||||| |||| ||||||||    
T  31583750 atgacatgtccataagttgttttcaacttatttccataagcttttcgggatagcttatgaaaacaatttgacttcattttatc 31583668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 2112278 - 2112209
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||| ||||||||||| | ||||||  |||||||||  ||||||| |||||||||    
T  2112278 acaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaa 2112209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 2205610 - 2205671
Alignment:
Q  111 ttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    |||||||||||| ||||||| || |||||||||||||||||| ||||| ||||| |||||||    
T  2205610 ttcagcttatttccataagctctccaagatagcttatgaaaacaatttgactttgttttatc 2205671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 3528881 - 3528812
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| || || ||||||||| ||||||||||||||| || |||||||| | |||||||    
T  3528881 acaacttatgacatgtccataacttgttttcatcttattttcataagctctccaagatagttcatgaaaa 3528812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 30863324 - 30863255
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| || ||||||||||||||||| ||  |||||| ||||||| |||| ||||||||    
T  30863324 acaacttatgacatgtacataagttgttttcagcttacttctataagctcttcaagctagcctatgaaaa 30863255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 26694931 - 26694880
Alignment:
Q  108 gttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||| ||||||    
T  26694931 gttttcagcttattttcataagttcttcaagatagtttatgaaaacaattta 26694880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 835265 - 835310
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||||||  || ||||||||||||||||||    
T  835265 tgttttcagcttattttcataagttctccaagatagcttatgaaaa 835310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 5564124 - 5564189
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| |  ||| |||||||||||||||| ||||| | |||||||| ||||||||||||    
T  5564124 cttatgacatgtccgaaagctgttttcagcttatttgcataaactcttcaagacagcttatgaaaa 5564189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 7931718 - 7931787
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||  |||||||||||||||||||| | ||||| ||  | |||||||| ||||||    
T  7931718 acaacttatgacatgttcttaagttgttttcagcttatttccgtaagctctgtaggatagcttttgaaaa 7931787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 10616533 - 10616602
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| |  ||||||| ||||||||||||| |||||| || ||| ||||||||| ||||    
T  10616533 acaacttatgacatgtccgtaagttgtgttcagcttatttttataagctctccaaaatagcttattaaaa 10616602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 20368172 - 20368241
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||| ||| |  ||||| ||||||||||||||  || ||||| ||||||||||||    
T  20368172 acaacttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaa 20368241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 27894100 - 27894055
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||    
T  27894100 tgttttcagcttattttcataagcttttcaagatatcttatgaaaa 27894055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 31624164 - 31624099
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||| ||| |||||||| |||||||||||||   || ||||||||| ||||||||    
T  31624164 cttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaa 31624099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 32386559 - 32386624
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||| || || |||| || |||||||    
T  32386559 cttataacatgtccacaacttgttttcagcttattttcataagctctccaggataactaatgaaaa 32386624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 34403933 - 34403864
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||| ||| |||||||| ||||||| ||||||| ||| |  | ||||||||||||    
T  34403933 acaacttatgacatgttcataaggtgttttcaccttatttccataagctctttagtacagcttatgaaaa 34403864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 34939591 - 34939526
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 148  Q
    ||||||||||||| || |  |||||||||||||||||||| ||||| | ||||| |||||||||||    
T  34939591 acaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatagcttatg 34939526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 2455888 - 2455816
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    |||||||||||||||  || ||  | |||||| ||||||| ||||||| || |||||||||||||||||||||    
T  2455888 acaacttatgacatgcccataaactattttcaacttatttccataagctctccaagatagcttatgaaaataa 2455816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 17241254 - 17241314
Alignment:
Q  93 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 153  Q
    ||||||||| |||||||||||| ||||||| ||||| | || |||||||||| ||||||||    
T  17241254 acatgttcataagttgttttcaacttatttccataaactctccaagatagctaatgaaaat 17241314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 19275633 - 19275697
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| |||||| || |||| | |||||| ||||||| ||||| |||||||||||||||    
T  19275633 ttatgacatgtccacaagctgatttcggtttatttccataagctcttcatgatagcttatgaaaa 19275697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 20370940 - 20370892
Alignment:
Q  104 agttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| |||||||||||||||||| | ||||||| ||||||||    
T  20370940 agttgttttcatcttattttcataagcactcctagatagcatatgaaaa 20370892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 20512656 - 20512704
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||||||||||||| ||||||| |||||  |||||||||||||    
T  20512656 aagttgttttcagcttatttccataagctcttcataatagcttatgaaa 20512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 29837077 - 29837148
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    ||||||| |||||| || | ||||||||| ||||| |||||||||||| ||||| ||||| ||||||||||||    
T  29837077 acaacttctgacatatttataagttgttt-cagctaattttcataagctcttcaggatagtttatgaaaataa 29837148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 33832265 - 33832309
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcata 127  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||    
T  33832265 acaacttatgacatgtttataagttgtttttagcttattttcata 33832309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 821872 - 821833
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcata 127  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  821872 ttatgacatgttcataagctgttttcagcttattttcata 821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 8364970 - 8365037
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| |||||||||| ||||| |||||||||||||||||||| ||  |  || |||||||||||||||    
T  8364970 aactgatgacatgtttacaagctgttttcagcttattttcatcagttcaccatgatagcttatgaaaa 8365037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 31421023 - 31420976
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    |||||||||  ||| |||| ||||||||||||||||||||||||||||    
T  31421023 acaacttatcgcatattcataagttgttttcagcttattttcataagc 31420976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 34939818 - 34939755
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaa 150  Q
    |||||||||||| || || ||||||||||||||||| ||||| | || || |||||||||||||    
T  34939818 cttatgacatgtccataaattgttttcagcttatttccataaactctccaggatagcttatgaa 34939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 281841 - 281907
Alignment:
Q  84 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaa 150  Q
    |||||||||||||||  | |||||||||||||||||||| ||| ||| ||  | |||||||||||||    
T  281841 caacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaa 281907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 696676 - 696634
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataag 129  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||    
T  696676 cttatgacatgttcataagctgttttcagcttattctcataag 696634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 10031809 - 10031723
Alignment:
Q  84 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa-tttaactttatttt 169  Q
    ||||||| ||||| | || |||||||||||| ||||||| | ||||| || ||||| ||||||| |||| || ||||||||||||||    
T  10031809 caacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaattttaactttatttt 10031723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 29296292 - 29296334
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||||| || ||||| ||||||||||||||||||||||    
T  29296292 ttatgacatgtccataagttattttcagcttattttcataagc 29296334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 152
Target Start/End: Original strand, 31812036 - 31812074
Alignment:
Q  114 agcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  31812036 agcttattttcataagctctccaagatagcttatgaaaa 31812074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 733171 - 733208
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattt 122  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  733171 aacttatgacatgtccacaagttgttttcagcatattt 733208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 1498035 - 1497990
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| ||||||||||||||| || |||||||| |||||||||    
T  1498035 tgttttcaccttattttcataagctctccaagatagtttatgaaaa 1497990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 1575973 - 1575928
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataa 128  Q
    ||||||||||||||||||| ||| |||||| | |||||||||||||    
T  1575973 acaacttatgacatgttcataagctgtttttaacttattttcataa 1575928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 13907901 - 13907856
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||| | |||||||||||||| |||||||||||||| ||||||    
T  13907901 tgttttccgtttattttcataagctcttcaagatagcttttgaaaa 13907856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 27909636 - 27909677
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    |||||||||| || |||||||||||||||||||| |||||||    
T  27909636 tatgacatgtccataagttgttttcagcttatttccataagc 27909677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 32387073 - 32387118
Alignment:
Q  109 ttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||||||||||||||||||| |||||  ||| ||||||||||||    
T  32387073 ttttcagcttattttcataagctcttcagaataacttatgaaaata 32387118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 33089580 - 33089515
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| |||||||| | ||||||||||  ||||||||||||| || |  ||||||||||||||||||    
T  33089580 cttaggacatgtttataagttgttttacgcttattttcataggctccccaagatagcttatgaaaa 33089515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 7785740 - 7785796
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagc 143  Q
    ||||||||||||  | |||||||||||||||||||| ||||||| || ||| |||||    
T  7785740 cttatgacatgtctataagttgttttcagcttatttccataagctctccaaaatagc 7785796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 11600870 - 11600938
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    |||||||||||| || ||  | ||||||||||||||||||| || |||||  | |||||||||||||||    
T  11600870 cttatgacatgtccaaaaactattttcagcttattttcataggctcttcagaacagcttatgaaaataa 11600938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 13907650 - 13907594
Alignment:
Q  96 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| ||||||| ||||||||||||   || |||||| |||||||||||    
T  13907650 tgttcacaagttattttcagtttattttcataatttctccaagatggcttatgaaaa 13907594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 32577978 - 32578042
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||||||||||||| |   || |||||||||||||||| |||| || ||||| ||||||||||    
T  32577978 acaacttatgacatgtccttgagctgttttcagcttatttccatatgctcttcaggatagcttat 32578042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 36139952 - 36139897
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatag 142  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  36139952 cttatgacatgttcacaagctgttttcagcttattttcataagctcttcaagatag 36139897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 36101642 - 36101587
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatag 142  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||    
T  36101642 cttatgacatgttcacaagctgttttcagcttattttcataagctcttcaggatag 36101587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 36887580 - 36887513
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||  ||||||||| |||||||||||    
T  36887580 aacttttgacatgttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaaa 36887513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 21367742 - 21367676
Alignment:
Q  87 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| ||||||||| |||||||||||||||||||||||  || ||||||||||||||||||    
T  21367742 cttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaa 21367676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 16790394 - 16790459
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    ||||||||| ||||||||||||||  | |||||||||||||||||||||||| | |||||||||||    
T  16790394 tgttttcagtttattttcataagctatccaagatagcttatgaaaataatttgattttattttatc 16790459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 37273212 - 37273143
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| || |||||||||||| ||||||| ||||||  || ||||||||||||||||||    
T  37273212 acaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaa 37273143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 23808060 - 23808120
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||||||||||||||| ||||||||| ||||||||||||| | || |||||||||||||    
T  23808060 cttatgacatgttcacaaattgttttcatcttattttcataaactctccaagatagcttat 23808120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 54837030 - 54837098
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    ||||||||||||||| || |||||||| ||||||||| ||||||  | |||||||||||||||||||||    
T  54837030 cttatgacatgttcataacttgttttccgcttatttttataagctgtccaagatagcttatgaaaataa 54837098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 20669244 - 20669181
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||| ||| ||||||| |||||||| ||||||| || ||||||||||||||||||    
T  20669244 tatgacatgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaa 20669181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 33883748 - 33883807
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 148  Q
    ||||||||||||| |||||||||||||||||||||||||||  ||  |||||||||||||    
T  33883748 tatgacatgttcataagttgttttcagcttattttcataagttctctaagatagcttatg 33883807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 42745116 - 42745053
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta 146  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||  || |||||||||||    
T  42745116 acaacttatgacatgttcataagttgttttcatcttatttccataagcttttgaagatagctta 42745053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 52440658 - 52440725
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||||||||| |||||||||||| || |||||||||||  ||||||||||  |||||||||||    
T  52440658 cttatgacatgttcataagttgttttcaactaattttcataagttcttcaagataaattatgaaaata 52440725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 39602201 - 39602271
Alignment:
Q  82 gacaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| ||||||||||||||| || ||||||||| ||||||||||||||  ||  |||||||||||||||||    
T  39602201 gacagcttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaa 39602271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 40665500 - 40665438
Alignment:
Q  90 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| ||| ||||||||||||||||| |||||| || ||||||| ||||||||||    
T  40665500 atgacatgttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaa 40665438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 24785279 - 24785214
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||| ||  | |||||||||||||||    
T  24785279 cttatgacatgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaa 24785214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 30573906 - 30573975
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| ||||| |||||||| ||| |||||||||||||| ||||| ||| || ||||||||||||||||||    
T  30573906 acaaattatggcatgttcataagctgttttcagcttatgttcatcagctctccaagatagcttatgaaaa 30573975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 34924552 - 34924601
Alignment:
Q  105 gttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  34924552 gttgttttcagcttattttcataagctctctaagatagcttatgaaaata 34924601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 52619081 - 52619012
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| |||||||||||||| ||| | |||||| |||||||||| |||| |||||||||||||| ||||||    
T  52619081 acaatttatgacatgttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaa 52619012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 36200174 - 36200110
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||||||||||||| || |||||||||||||||||||| ||| ||| || || ||||||||||    
T  36200174 acaacttatgacatgtccataagttgttttcagcttatttccatgagctctacaggatagcttat 36200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 45541645 - 45541577
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    ||||||||||||||| ||| ||||||||| ||||| |||||||   | |||||||||||||||||||||    
T  45541645 cttatgacatgttcataagctgttttcaggttattctcataagttatccaagatagcttatgaaaataa 45541577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 3044251 - 3044298
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  3044251 acaacttatgacatgttcataagctgttttcaacttattttcataagc 3044298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 45432936 - 45433007
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    |||||||||||||| |||||||||||||||||||| ||||||| || || |||  ||| |||||| ||||||    
T  45432936 ttatgacatgttcataagttgttttcagcttatttccataagctctacaggatgacttgtgaaaacaattta 45433007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 53736122 - 53736181
Alignment:
Q  93 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||  |||| |||||||||    
T  53736122 acatgttcataagttgctttcagcttattttcataaacacttcagtataggttatgaaaa 53736181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 2825199 - 2825153
Alignment:
Q  109 ttttcagcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    |||| ||||||||||||||||| || |||||||||||||||||||||    
T  2825199 ttttaagcttattttcataagctctccaagatagcttatgaaaataa 2825153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 20502083 - 20502129
Alignment:
Q  106 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||    
T  20502083 ttgttttcagcttattctcataagctcttcaggatagcttatgaaaa 20502129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 36878753 - 36878819
Alignment:
Q  88 ttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 153  Q
    ||||||||| || ||||||  ||||||||||| ||||||||||  ||||||||||||||||||||||    
T  36878753 ttatgacattgtccacaagcggttttcagctttttttcataagttcttcaagatagcttatgaaaat 36878819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 2719526 - 2719477
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| ||||||||||||||||||  || ||||||||||||||||||    
T  2719526 aagttgttctcagcttattttcataagttctccaagatagcttatgaaaa 2719477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 8933861 - 8933796
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || ||||||  || ||||||||||||||||| || ||||||| ||||||||||    
T  8933861 cttatgacatgtccaaaagttgcatttagcttattttcataagctctccaagataacttatgaaaa 8933796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 25925818 - 25925773
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  25925818 aacttatgacatgttcataagctgttttcaacttattttcataagc 25925773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 35394494 - 35394559
Alignment:
Q  88 ttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| ||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||    
T  35394494 ttatgacattgttcataagctgttttcaacttattttcataaattcttcaagatagcttatgaaaa 35394559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 172
Target Start/End: Complemental strand, 37825196 - 37825111
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    |||||||||||| || ||||||||||||| |||||| ||||||| || || || |||| || |||| |||||||||| || |||||    
T  37825196 cttatgacatgtccataagttgttttcaggttatttccataagctctccaggaaagctaataaaaacaatttaacttgatattatc 37825111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 47249481 - 47249538
Alignment:
Q  86 acttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagc 143  Q
    |||||||||||||||| ||||||||||  |||||||||||||||  || |||||||||    
T  47249481 acttatgacatgttcataagttgtttttggcttattttcataagtcctccaagatagc 47249538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 47513731 - 47513670
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagct 144  Q
    |||| |||||||| ||||| ||||||||||||  |||||||||||||| || ||||||||||    
T  47513731 acaagttatgacacgttcataagttgttttcaatttattttcataagctctccaagatagct 47513670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 50600170 - 50600239
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||| ||||||||| ||| || |||||||||||||||||||||||  || ||| |||||| |||||||    
T  50600170 acaactcatgacatgtccacgagctgttttcagcttattttcataagttctccaatatagctgatgaaaa 50600239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 12985357 - 12985425
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 171  Q
    ||||||||||| |||||||| ||||||  ||| | ||||||||||||||| | |||| |||||||||||    
T  12985357 aagttgttttcggcttatttccataagttcttgaggatagcttatgaaaacagtttatctttattttat 12985425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 13371175 - 13371127
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||||||||||||| ||||||| |||||  |||||||||||||    
T  13371175 aagttgttttcagcttatttccataagctcttcataatagcttatgaaa 13371127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 26320107 - 26320163
Alignment:
Q  96 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||| ||||||||||||| |||||||| ||||  |||||||| ||||||||||||    
T  26320107 tgttcataagttgttttcagtttattttcgtaagttcttcaagagagcttatgaaaa 26320163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 26479003 - 26478943
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactt 163  Q
    |||||||||| | ||||||||||||  | ||| | ||||||||||||||||||||||||||    
T  26479003 aagttgtttttaacttattttcatatactctttaggatagcttatgaaaataatttaactt 26478943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 29771916 - 29771852
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||||| ||||||| || |||||||||||| ||||||| |||||||   ||||||||||||||    
T  29771916 acaacttaggacatgtccataagttgttttcaacttatttccataagcttctcaagatagcttat 29771852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 33965486 - 33965550
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttc-ataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||  || ||||| |||||||||| ||||| |||||| |||||||||||||||||||||    
T  33965486 tatgacatgcccataagttattttcagctttttttccataagctcttcaagatagcttatgaaaa 33965550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 41724290 - 41724250
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttatttt 123  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  41724290 acaacttatgacatgtccataagttgttttcagcttatttt 41724250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 1816659 - 1816592
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| |||| | | ||||||||||||||||| |||||| || ||  ||||||||||||||    
T  1816659 aacttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaa 1816592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 13413979 - 13413920
Alignment:
Q  112 tcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 171  Q
    |||||||||||| ||||||  |||||||||||||||||||| |  |||| ||||||||||    
T  13413979 tcagcttattttgataagctgttcaagatagcttatgaaaacagcttaaatttattttat 13413920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 25453863 - 25453922
Alignment:
Q  95 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||||| | ||||||||||||||||||||||  | || ||||| |||||||||||    
T  25453863 atgttcacaagctcttttcagcttattttcataagctttccaggatagtttatgaaaata 25453922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 34414796 - 34414847
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||||||||||||||||||||||| | || || ||||| |||||||||||    
T  34414796 aagttgttttcagcttattttcataaactctccatgatagtttatgaaaata 34414847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 36445899 - 36445856
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    |||||||||||||||  ||||||||||| |||||||||||||||    
T  36445899 cttatgacatgttcattagttgttttcatcttattttcataagc 36445856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 43115134 - 43115087
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    |||||||||||||||| || || ||||||||||||||||| |||||||    
T  43115134 acaacttatgacatgtccataacttgttttcagcttatttccataagc 43115087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 51130822 - 51130759
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| || |||||| ||||||||||||||||  ||| || || |||||||||||||||    
T  51130822 tatgacatgtccataagttgctttcagcttattttcaatagctctccatgatagcttatgaaaa 51130759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 5391953 - 5391911
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataag 129  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||    
T  5391953 cttatgacatgttcataagctgttttcaacttattttcataag 5391911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 5396271 - 5396229
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataag 129  Q
    ||||||||||||| | ||| |||||||||||||||||||||||    
T  5396271 cttatgacatgttaataaggtgttttcagcttattttcataag 5396229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 39723236 - 39723278
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataag 129  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||    
T  39723236 cttatgacatgttcataagctgttttcagcttattctcataag 39723278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 41633415 - 41633369
Alignment:
Q  106 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||||||||| || ||| |||||| |||||||    
T  41633415 ttgttttcagcttattttcataagctctccaaaatagctgatgaaaa 41633369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 49465780 - 49465826
Alignment:
Q  178 atagcttacacatatgcgtttttcatgataaatgtttatgctataaa 224  Q
    |||||||||||||| |||||| ||||||||| || ||||||||||||    
T  49465780 atagcttacacataagcgtttctcatgataagtgattatgctataaa 49465826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 1217796 - 1217861
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || |||||||||||| |||| |||||||||  ||  | |||||||||||||||    
T  1217796 cttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaa 1217861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 14145959 - 14145918
Alignment:
Q  114 agcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    |||||||||||||||| | | |||||||||||||||||||||    
T  14145959 agcttattttcataagtaatccaagatagcttatgaaaataa 14145918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 20170720 - 20170769
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| ||||||||| ||||||| || |||||||||||| |||||    
T  20170720 aagttgtttttagcttatttgcataagctctacaagatagcttaggaaaa 20170769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 21574568 - 21574499
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||| ||| || ||| ||||||||| ||||||| || || | |||||||| ||||    
T  21574568 acaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaa 21574499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 34383000 - 34382951
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| ||||||||| |||||  |||| |||||||||||||||    
T  34383000 aagttgttttcatcttattttcttaagcttttcaggatagcttatgaaaa 34382951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 34610801 - 34610866
Alignment:
Q  87 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||| ||||| |||| |||||||||| |||||||||||  |  |||||||||||||||||    
T  34610801 cttatgacattgttcataagtggttttcagctgattttcataagttcgccaagatagcttatgaaa 34610866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 34954154 - 34954113
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    |||||||||||||  || ||||||||||||||||||||||||    
T  34954154 tatgacatgttcatgagctgttttcagcttattttcataagc 34954113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 41671381 - 41671320
Alignment:
Q  90 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||  | |||||||||||| |||||||||||||    |||||||||||||||||||    
T  41671381 atgacatgtctataagttgttttcaacttattttcataaatttttcaagatagcttatgaaa 41671320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 46407906 - 46407975
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    |||||||||  |||||||||||| |||| | |||  |||||||||||||| | |||||||||| ||||||    
T  46407906 aagttgtttctagcttattttcacaagctcatcacaatagcttatgaaaacagtttaactttactttatc 46407975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 54180776 - 54180841
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || |||||||||| |||||||||  |||||| || ||  ||||||||||||||    
T  54180776 cttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaa 54180841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 482784 - 482852
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    ||||||||| ||||| ||| | | | |||||||||||||| ||||| | ||||||||||| ||||||||    
T  482784 acaacttataacatgctcatatgatattttcagcttatttccataaactcttcaagatagtttatgaaa 482852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 2071109 - 2071065
Alignment:
Q  108 gttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| ||||||||||||||||| |||||  ||||||||||||||    
T  2071109 gtttttagcttattttcataagctcttcatcatagcttatgaaaa 2071065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 2128255 - 2128319
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| ||||||||| ||| ||||||||||||||||||||| |  ||  ||||| |||||||||||    
T  2128255 ttataacatgttcataagctgttttcagcttattttcatacgttctaaaagatggcttatgaaaa 2128319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 5166395 - 5166343
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagata 141  Q
    ||||||||||||| ||| |||||||| |||||||||||| || ||| ||||||    
T  5166395 tatgacatgttcataagctgttttcatcttattttcatacgctcttgaagata 5166343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 11040612 - 11040656
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagcact 133  Q
    |||||||||| || ||||||||||| |||||||||||||| ||||    
T  11040612 tatgacatgtccataagttgttttcggcttattttcataaacact 11040656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 20195030 - 20195077
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttca 136  Q
    ||||||||| |||| |||||||||||||||| ||||||||||| |||||    
T  20195030 ttatgacatattcaaaagttgttttcagctt-ttttcataagctcttca 20195077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 21862177 - 21862233
Alignment:
Q  93 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 149  Q
    |||||| || |||||||||||||||||||| ||||||| || | |||||||| ||||    
T  21862177 acatgtccataagttgttttcagcttatttccataagctctcccagatagctaatga 21862233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 23793642 - 23793594
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    ||||||||||||||||||||  ||||||  | |||||||||||||||||    
T  23793642 aagttgttttcagcttatttctataagctttccaagatagcttatgaaa 23793594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 25447250 - 25447305
Alignment:
Q  96 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| |||||||||||| || ||||||| |  |||||||||||||||||||    
T  25447250 tgttcacaagctgttttcagctttttctcataag-aaatcaagatagcttatgaaaa 25447305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 33405160 - 33405228
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttat-tttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| ||||||| ||  ||||||| |||||  |||||||||  |||||||||||||||||||||    
T  33405160 aacttatgatatgttcataaactgttttcggcttaactttcataagttcttcaagatagcttatgaaaa 33405228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 37138344 - 37138296
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    |||||||||||||||||| ||| | ||  ||||||||||||||||||||    
T  37138344 tgttttcagcttattttcctaaactctctaagatagcttatgaaaataa 37138296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 48048975 - 48049043
Alignment:
Q  84 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| ||||||||| || ||| |||||||||||||||| ||||| | |  |||||||||| |||||||    
T  48048975 caactcatgacatgtccataagctgttttcagcttatttccataacctccccaagatagctaatgaaaa 48049043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 50952407 - 50952347
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    ||||||||||||||| ||  |||||| ||||||||| ||||||| || |||||||| ||||    
T  50952407 cttatgacatgttcataaactgttttaagcttatttccataagctctccaagatagtttat 50952347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 28300297 - 28300367
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    ||||||||||||  |||||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||    
T  28300297 tatgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagttta 28300367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 23819163 - 23819098
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || |||||||||||| |||||||  |||||| |||||||||||||||||||||    
T  23819163 cttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaa 23819098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 47800676 - 47800632
Alignment:
Q  108 gttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  47800676 gttttcagcttattttcataagctcttcaagatagcttatgaaaa 47800632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 2996651 - 2996582
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| || ||| | |||||| |||||||||||| || || ||||||||||||||||||    
T  2996651 acaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaa 2996582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 4471246 - 4471177
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||| | || ||||||| |||| |||||||||| ||||  ||||||||||||||||||||    
T  4471246 acaacttatgacatatccataagttgtattcaacttattttcagaagcttttcaagatagcttatgaaaa 4471177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 17884134 - 17884077
Alignment:
Q  95 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||| ||||||||||||||| |||||||||||| || ||| ||||||||||||||    
T  17884134 atgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaa 17884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 21043231 - 21043316
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    ||||||||| ||||| ||| |||||||||  |||||||||| || ||||| ||||||||||||||| | ||||||| || ||||||    
T  21043231 cttatgacacgttcataagctgttttcagtgtattttcatatgctcttcaggatagcttatgaaaacagtttaactataatttatc 21043316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 29263444 - 29263379
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||| ||||||| |||||||||||||||||||| || |||| || || |||||||||||||||    
T  29263444 cttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaa 29263379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 47146028 - 47145971
Alignment:
Q  95 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||| |||||||||||| ||||||||||||||| |||||||| || |||||||||    
T  47146028 atgttcataagttgttttcaccttattttcataagctcttcaagacagtttatgaaaa 47145971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 52746836 - 52746901
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| |||||||||| ||| ||||||||||| ||||||||||||  | ||||||||||||||||||    
T  52746836 cttaagacatgttcataagctgttttcagctgattttcataagccttacaagatagcttatgaaaa 52746901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 53673670 - 53673719
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  53673670 aagttgttttcagcttatttacataagctctccaagatagcttatgaaaa 53673719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 4500899 - 4500836
Alignment:
Q  108 gttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 171  Q
    ||||||||||||||||||||| | || ||| ||||||| |||||| ||||||||||| ||||||    
T  4500899 gttttcagcttattttcataatctctccaaaatagcttttgaaaacaatttaactttgttttat 4500836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 46019623 - 46019690
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||| | |||||||||||| ||||| ||||||||| ||||  |||| ||||||||||    
T  46019623 aacttatgacatgttgataagttgttttcaacttatattcataagctcttcgggataacttatgaaaa 46019690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 51630165 - 51630118
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||    
T  51630165 tgttttcagcttattttcataaattcttcaagatagcttatgaaaata 51630118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 7694009 - 7694071
Alignment:
Q  90 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| |||||||||||||||||||| ||||| | || || |||| ||||||||||    
T  7694009 atgacatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaa 7694071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 24747390 - 24747348
Alignment:
Q  90 atgacatgttcacaagttgttttcagcttattttcataagcac 132  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  24747390 atgacatgttcataagttgttttcagcttattttcatatgcac 24747348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 4798566 - 4798627
Alignment:
Q  91 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| || ||| |||||| ||||||||| ||||||| || ||||||||||||||||||    
T  4798566 tgacatgtacataagctgttttgagcttatttgcataagctctccaagatagcttatgaaaa 4798627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 18011924 - 18011871
Alignment:
Q  108 gttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaac 161  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  18011924 gtttttagcttattttcataaactcttcaagatagcttatgaaaacagtttaac 18011871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 18628555 - 18628604
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagataacttatgaaaa 18628604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 172
Target Start/End: Complemental strand, 35743356 - 35743271
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    ||||||||||||| | ||||||||| || ||||||| ||||| | ||||| ||||| |||||||| || |||  ||||||||||||    
T  35743356 cttatgacatgtttataagttgtttccaacttatttccataaactcttcatgatagtttatgaaagtagtttgcctttattttatc 35743271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 40532586 - 40532655
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| | ||||||| |||||||||||| ||||||||| || || || ||||| ||||||||||||    
T  40532586 acaacttattatatgttcataagttgttttcatcttattttcgtaggctctccaagacagcttatgaaaa 40532655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 5131262 - 5131335
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagctt----atgaaaataatttaactttattttatc 172  Q
    |||||||||||||||||||| ||||||| || || ||||||||    ||||||| | |||||||||||||||||    
T  5131262 aagttgttttcagcttatttccataagctctccaggatagcttttacatgaaaacattttaactttattttatc 5131335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 44249359 - 44249295
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    ||||||||||||| | ||||| | |||||||||||||||||| | || |||||||| ||||||||    
T  44249359 cttatgacatgttgataagttttcttcagcttattttcataaactctccaagatagtttatgaaa 44249295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 1137786 - 1137743
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||    
T  1137786 cttatgacatgttcataagttgttttcagtttatttccataagc 1137743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 8469374 - 8469413
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcata 127  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  8469374 ttatgacatgttcataagttgttttcagcttatttccata 8469413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 25548140 - 25548207
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttatttta 170  Q
    |||||||||||| ||||||||||||||| || |   |||| ||||||||| || ||||||||||||||    
T  25548140 aagttgttttcaacttattttcataagctctgctgtatagtttatgaaaacaacttaactttatttta 25548207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 42641635 - 42641702
Alignment:
Q  87 cttatgacatgttcacaagttgtttt-cagcttat-tttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||| |  ||| ||||||||||||||    
T  42641635 cttatgacatgttcacaagctgttttgcagcttatatttcataagctcaccaaaatagcttatgaaaa 42641702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 43824357 - 43824314
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    |||||| |||||||| |||||||||||||||||||| |||||||    
T  43824357 cttatggcatgttcataagttgttttcagcttatttccataagc 43824314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 46401342 - 46401303
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattt 122  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  46401342 acaacttatgacatgttcataagttgtattcagcttattt 46401303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 55084483 - 55084542
Alignment:
Q  93 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| ||| || ||||||||||||||||||||| ||  ||||||||| |||||||    
T  55084483 acatgttcataagctggtttcagcttattttcataagctctctaagatagctcatgaaaa 55084542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 825485 - 825551
Alignment:
Q  86 acttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| |||  |  |||||||||||||||||||||||  || ||| ||||||||||||||    
T  825485 acttatgacatgctcattaactgttttcagcttattttcataagttctccaaaatagcttatgaaaa 825551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 152
Target Start/End: Original strand, 2111073 - 2111111
Alignment:
Q  114 agcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  2111073 agcttattttcataagtccttcaagatagcttatgaaaa 2111111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 4691926 - 4691880
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataag 129  Q
    |||||||||||||||  || | |||||||||||||||||||||||||    
T  4691926 acaacttatgacatgcccatatgttgttttcagcttattttcataag 4691880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 152
Target Start/End: Complemental strand, 29778842 - 29778804
Alignment:
Q  114 agcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  29778842 agcttattttcataagctcttcaaggtagcttatgaaaa 29778804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 30631290 - 30631248
Alignment:
Q  110 tttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||||||||| |||||| | |||||||    
T  30631290 tttcagcttattttcataagcacttccagataggtaatgaaaa 30631248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 53155338 - 53155265
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    ||||||||||||||||  | || ||| |||||||||||||||| |||   |||| ||||||||||||||||| ||||    
T  53155338 acaacttatgacatgtctataaattgctttcagcttattttcacaag---ttcatgatagcttatgaaaatagttta 53155265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 3155657 - 3155612
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||| ||  ||||||||||| |||||||||    
T  3155657 tgttttcagcttattttcattagttcttcaagatagtttatgaaaa 3155612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 14011288 - 14011247
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatg 148  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  14011288 tgttttcagcttatttccataagctctccaagatagcttatg 14011247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 30377433 - 30377470
Alignment:
Q  109 ttttcagcttattttcataagcacttcaagatagctta 146  Q
    |||||||||||||||||||||| || ||||||||||||    
T  30377433 ttttcagcttattttcataagctctccaagatagctta 30377470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 35290203 - 35290248
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||  ||||| ||| |||||||||||||||||    
T  35290203 tgttttcagcttattttagtaagctcttaaagatagcttatgaaaa 35290248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 42461323 - 42461282
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    |||||| |||||| |||||| |||||||||||||||||||||    
T  42461323 tatgacgtgttcataagttgatttcagcttattttcataagc 42461282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 43932506 - 43932437
Alignment:
Q  90 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    ||||||||| || |||||||||||| |||||||||| |||  |||||  ||| |||||||||||| ||||    
T  43932506 atgacatgtccataagttgttttcatcttattttcacaagttcttcagaataacttatgaaaatagttta 43932437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 46201424 - 46201387
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattt 122  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  46201424 aacttatgacatgttcataggttgttttcagcttattt 46201387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 46415784 - 46415853
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| |||||||||| || ||||||||||||||| |||||  ||||| ||  | |||||||||||||||    
T  46415784 acaacctatgacatgtccataagttgttttcagctaattttactaagctctcgaggatagcttatgaaaa 46415853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 47118979 - 47119024
Alignment:
Q  105 gttgttttcagcttattttcataagcacttcaagatagcttatgaa 150  Q
    |||||||||||||||| ||||||||  |||||||||||| ||||||    
T  47118979 gttgttttcagcttatcttcataagttcttcaagatagcatatgaa 47119024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 49219197 - 49219148
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||| ||||| | ||| ||||||| |||||||||    
T  49219197 aagttgttttcagcttatttccataatctctttaagatagtttatgaaaa 49219148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 52735195 - 52735131
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || | ||| |||| ||||||||| ||||||| ||||||||||||||| |||||    
T  52735195 cttatgacatgtccatatgttatttt-agcttatttccataagctcttcaagatagcttacgaaaa 52735131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 488118 - 488186
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||||||||| || ||| |||||||| ||||||| | |||   || |||||||||||||||||    
T  488118 acaacttatgacatgtgcataagctgttttcatcttatttacgtaaattctccaagatagcttatgaaa 488186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 2592321 - 2592365
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||||||||||||||||| ||||||| || ||| |||||||||    
T  2592321 aagttgttttcagcttatttccataagctctccaaaatagcttat 2592365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 2874616 - 2874684
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||||||||| || ||  | ||||| |||||||| |||||||||| |  ||||||||||||||    
T  2874616 acaacttatgacatgtccataatctattttccgcttatttccataagcactcctggatagcttatgaaa 2874684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 17751160 - 17751200
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||| ||||||||||||||||| || |||||||||||||    
T  17751160 tgttttaagcttattttcataagctctgcaagatagcttat 17751200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 19250623 - 19250555
Alignment:
Q  84 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||| || ||| || ||||| |||||||| ||| || |||||||||| ||||| ||||    
T  19250623 caacttatgacatgtccataagctgatttcaacttatttttatatgctcttcaagataacttataaaaa 19250555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 48719388 - 48719428
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataa 128  Q
    |||||||||||||  ||| ||||||||||||||||||||||    
T  48719388 ttatgacatgttcgtaagctgttttcagcttattttcataa 48719428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 50569321 - 50569369
Alignment:
Q  83 acaacttatgacatgttcacaagtt-gttttcagcttattttcataagc 130  Q
    |||||||||||||| |||| ||||| |||||||||||||| ||||||||    
T  50569321 acaacttatgacattttcataagtttgttttcagcttattgtcataagc 50569369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 53792629 - 53792585
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    |||||||||||||||||||||||||| | || |||||||| ||||    
T  53792629 aagttgttttcagcttattttcataaactctccaagatagtttat 53792585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 35379015 - 35379077
Alignment:
Q  90 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| |||||| |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  35379015 atgacttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaa 35379077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 44443394 - 44443328
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||| ||||||| ||||||||||||||||||||||||| || ||  |||||||||||||||||||    
T  44443394 ttatgaaatgttcataagttgttttcagcttattttcatatgctctcaaagatagcttatgaaaata 44443328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 14666626 - 14666557
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||   ||||||||||| ||||||    
T  14666626 acaacttatgacatgttcataggttgttttcaccttattttcataagcataccaagatagcttgtgaaaa 14666557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 34652028 - 34652097
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| || ||| |||||||| ||||||| ||||||| || ||||||||||||||||||    
T  34652028 acaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 43199776 - 43199841
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 148  Q
    ||||||| ||||||||| | ||||||||||||||||| |||||||||| || ||||||||||||||    
T  43199776 acaacttgtgacatgtttataagttgttttcagcttaatttcataagccctccaagatagcttatg 43199841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 680577 - 680510
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||||||| | ||  ||||||||||||||||||| |||  |||||||||||||||||||||||    
T  680577 cttatgacatgtttataaactgttttcagcttattttcacaagttcttcaagatagcttatgaaaata 680510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 12313169 - 12313240
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 158  Q
    |||||| |||||||| |||||| ||||| ||||||||||||||| || |||||||||||||| ||| |||||    
T  12313169 cttatgccatgttcataagttgatttcaccttattttcataagctctccaagatagcttatgtaaacaattt 12313240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 43910993 - 43911060
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||| ||||||||||||||||||| ||| ||||  | ||||||||||| ||||||    
T  43910993 aacttatgacatgttcataagttgttttcagcttattatcacaagctttccaagatagcttttgaaaa 43911060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 152
Target Start/End: Original strand, 43985021 - 43985064
Alignment:
Q  109 ttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  43985021 ttttcagcttattttcataagctcttcaagatagcttatgaaaa 43985064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 9174894 - 9174824
Alignment:
Q  83 acaacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||| ||||| ||| | |||||||||||||||||||||| ||  |||||||||||||||||    
T  9174894 acaacttatgacattgttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaaa 9174824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 9595310 - 9595260
Alignment:
Q  109 ttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  9595310 ttttcagcttattttcataagcattttaagatagtttatgaaaataattta 9595260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 1056121 - 1056190
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| || || || ||||| ||||||    
T  1056121 acaacttatgacatgttcattagttgttttcagcttgttttcataagctctacatgagagcttgtgaaaa 1056190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 3227698 - 3227763
Alignment:
Q  106 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 171  Q
    |||||||||||||||||||| || | || ||| |||||||||||||| ||||||||||| ||||||    
T  3227698 ttgttttcagcttattttcaaaatctctccaaaatagcttatgaaaacaatttaactttgttttat 3227763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 29316771 - 29316836
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||  || |||||||||| |||||||    
T  29316771 cttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaa 29316836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 16867812 - 16867748
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| |||| |||||||||||| ||||||| ||||||| || ||||||||||| ||||||    
T  16867812 ttatgacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaa 16867748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 15120261 - 15120186
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 158  Q
    |||||||||||||||||||  || |||||| |||||||||| |||||| || || ||||||||| ||||| |||||    
T  15120261 acaacttatgacatgttcattagctgttttaagcttattttgataagctctccatgatagcttacgaaaacaattt 15120186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 41809237 - 41809284
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  41809237 acaacttatgacatgttcataagttgtttttagcttatttccataagc 41809284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 41817242 - 41817175
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||||||| | || ||||||||||||||||| ||||||| || || ||||| |||||||||||    
T  41817242 cttatgacatgttgataatttgttttcagcttatttccataagctctccaggatagtttatgaaaata 41817175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 26143631 - 26143701
Alignment:
Q  83 acaacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| ||| ||||||| ||| |||||||||||||||||||||  || |||| |||||||||||||    
T  26143631 acaacttatgtcattgttcacaggttattttcagcttattttcataagttctccaagttagcttatgaaaa 26143701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 33942229 - 33942159
Alignment:
Q  82 gacaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||| ||| ||  | ||| |||||||||||    
T  33942229 gacaacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaa 33942159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 38078413 - 38078471
Alignment:
Q  94 catgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| |||||||||| |||| |||| ||||||| || ||||||||||||||||||    
T  38078413 catgttcataagttgttttgagctcatttacataagctctccaagatagcttatgaaaa 38078471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 44606102 - 44606148
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataag 129  Q
    |||||||||||||||| || ||||||||||||||| |||||||||||    
T  44606102 acaacttatgacatgtccataagttgttttcagctgattttcataag 44606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 1939324 - 1939393
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| || ||| |||||||| ||||||| ||||||| || ||  ||||||||||||||    
T  1939324 acaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaa 1939393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 3067396 - 3067449
Alignment:
Q  108 gttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaac 161  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  3067396 gtttttagcttattttcataaactcttcaagatagcttatgaaaacagtttaac 3067449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 7871717 - 7871652
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||| ||| ||| ||| |||||||||||||||| ||||||| |||||| | ||||||||||||    
T  7871717 cttatgatatgatcataaggtgttttcagcttatttccataagctcttcaaaagagcttatgaaaa 7871652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 8017508 - 8017443
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||| ||||||| || |||||||| || ||||||||||||  || ||||||||||||||||||    
T  8017508 cttatgatatgttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaaa 8017443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 9530726 - 9530791
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||||||| || ||||| |||| |||||| |||||||||| || || |||||||||||||||||    
T  9530726 tatgacatgtccataagttatttttagcttactttcataagctctccaggatagcttatgaaaata 9530791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 32821887 - 32821818
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| || ||| ||||||||| ||||||  |||||| ||| | |||||||||||||||    
T  32821887 acaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaa 32821818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 33941987 - 33941918
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||| ||||| ||| || ||||| |||||| |||||| | || ||||||||||||||||||    
T  33941987 acaacttatgacaagttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaa 33941918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 43065442 - 43065511
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| || || |||||||||||||||||  |||||| || || |||| ||||||||||    
T  43065442 acaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaa 43065511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 43141949 - 43141880
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||  || ||||||||||||  |||||| ||||| | ||||| |||||||||||||||    
T  43141949 acaacttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaaa 43141880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 656789 - 656837
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||| ||||||| ||||||||||||||| || |||||||||||||||||    
T  656789 aagtagttttcatcttattttcataagctctgcaagatagcttatgaaa 656837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 1893275 - 1893335
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt 145  Q
    |||||||||||||| || ||||| ||||||||||||||||| |||  || |||||||||||    
T  1893275 aacttatgacatgtacataagttattttcagcttattttcacaagttctccaagatagctt 1893335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 12147544 - 12147488
Alignment:
Q  74 ttattttggacaacttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    |||||| ||| | ||||||||||||||| || |||||||||| ||||||||||||||    
T  12147544 ttatttgggatagcttatgacatgttcataaattgttttcagtttattttcataagc 12147488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 12464480 - 12464536
Alignment:
Q  98 ttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||||| | ||||||||||||||||| |||  || ||||||||||||||||||||    
T  12464480 ttcacaagcttttttcagcttattttcacaagttctccaagatagcttatgaaaata 12464536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 35485994 - 35485926
Alignment:
Q  84 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| ||||||| ||| ||||||||||| |||| |||| || ||||| |||||||||| ||||    
T  35485994 caacttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagcttataaaaa 35485926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 152
Target Start/End: Complemental strand, 1810716 - 1810673
Alignment:
Q  109 ttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||| | |||||||||||||||| ||||    
T  1810716 ttttcagcttattttcataaactcttcaagatagcttataaaaa 1810673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 7928304 - 7928351
Alignment:
Q  96 tgttcacaagttgttttcagcttattttcataagcacttcaagatagc 143  Q
    |||||| |||||||||||||||||||||||||||  || |||||||||    
T  7928304 tgttcataagttgttttcagcttattttcataagttctccaagatagc 7928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 130
Target Start/End: Original strand, 8820292 - 8820331
Alignment:
Q  91 tgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  8820292 tgacatgttcacaagctgttttcagcttatttccataagc 8820331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 10563556 - 10563619
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| || ||| | |||||||||||||||| ||||| |||||  ||||||||||||||    
T  10563556 tatgacatgtccataagctattttcagcttattttcttaagctcttcagcatagcttatgaaaa 10563619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 12464722 - 12464679
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagctta 146  Q
    |||||||| ||||||||||||||||||  |||||||||||||||    
T  12464722 aagttgttctcagcttattttcataagttcttcaagatagctta 12464679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 30538165 - 30538204
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattt 122  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  30538165 acaacttatgacatgtccataagttgttttcagcttattt 30538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 36863650 - 36863693
Alignment:
Q  116 cttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    ||||||||||||||| || |||||||||||||||||| ||||||    
T  36863650 cttattttcataagctctccaagatagcttatgaaaacaattta 36863693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 42420071 - 42420004
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||| |||||||| || |||||||||||| |||| |||||||  | || |||||||||||||||||    
T  42420071 cttatgtcatgttcataaattgttttcagctcatttccataagctatccaggatagcttatgaaaata 42420004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 1625975 - 1625909
Alignment:
Q  87 cttatgaca-tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| |||||| ||| ||||||||||| |||||| ||||  || ||||||||||||||||||    
T  1625975 cttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaa 1625909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 7283074 - 7282988
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttatttt 169  Q
    ||||||||||| |||| || |||||||||||| ||||| | ||||||| || | | |||||||||||||| | ||| |||| |||||    
T  7283074 acaacttatgatatgtccataagttgttttcatcttatatccataagctctcccacatagcttatgaaaacagtttgacttcatttt 7282988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 11063561 - 11063519
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||||| || |||||||||| |||||||||||||||||    
T  11063561 ttatgacatgtccataagttgtttttagcttattttcataagc 11063519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 15978040 - 15977994
Alignment:
Q  106 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||||||| | || ||| ||||||||||||||    
T  15978040 ttgttttcagcttattttcataatctctccaaaatagcttatgaaaa 15977994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 26626948 - 26626882
Alignment:
Q  87 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| ||||| ||  ||||||||| |||||||||||||  || ||||||||||||||||||    
T  26626948 cttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaa 26626882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 35378531 - 35378593
Alignment:
Q  90 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||| |||||| ||||| ||||||||||||||||||||||  | |||||| ||||| |||||    
T  35378531 atgacttgttcataagttattttcagcttattttcataagctatccaagattgcttacgaaaa 35378593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 35993377 - 35993451
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaact 162  Q
    ||||||| ||| || || ||||||||||||||||||||||||  ||  | ||||||||||| ||| |||||||||    
T  35993377 ttatgacgtgtccataaattgttttcagcttattttcataagttctctatgatagcttatgcaaacaatttaact 35993451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 40682390 - 40682455
Alignment:
Q  87 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||  | |||||||| ||||||||||    
T  40682390 cttatgacattgttcataagttgttttcaacttattttcataagttc-tcaagatatcttatgaaaa 40682455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 41144284 - 41144202
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttatttt 169  Q
    ||||||||||||  | |||||||||| ||||||||| || || | || |||| ||||||||||||| |||||  |||||||||    
T  41144284 cttatgacatgtcaataagttgtttttagcttatttccagaaactctccaagttagcttatgaaaacaatttgtctttatttt 41144202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 44590089 - 44590043
Alignment:
Q  106 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||||    
T  44590089 ttgttttcagcttattctcacaagttcttcaagatagcttatgaaaa 44590043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 1056371 - 1056416
Alignment:
Q  109 ttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||||||||  |||| | |||||||||||||||||||||||    
T  1056371 ttttcagcttatttctataaactcttcaagatagcttatgaaaata 1056416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 8187445 - 8187514
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| || ||| |||||||||||||| |||||| ||||| | || || | |||||||||||||    
T  8187445 acaacttatgaaattttcgcaagttgttttcaggttatttccataatctctccatggtagcttatgaaaa 8187514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 11488353 - 11488287
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||||  || ||| |||||||||||||||||||| ||||| | || || ||||||||||||||    
T  11488353 acaacttatga--tggtcataagttgttttcagcttatttgcataatctctccaggatagcttatgaaa 11488287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 16398194 - 16398121
Alignment:
Q  82 gacaacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||||||||| | ||  ||| |||||||||||||||||||||||  || ||| ||| ||||||||||||    
T  16398194 gacaacttatgacattgctcgtaagctgttttcagcttattttcataagttctccaacataacttatgaaaata 16398121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 19333325 - 19333386
Alignment:
Q  91 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| ||| |||| ||||||||||||||||||| || ||| |||| ||| |||||    
T  19333325 tgacatgttcataagctgttctcagcttattttcataagctctccaatatagtttaagaaaa 19333386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 30552635 - 30552712
Alignment:
Q  83 acaacttatgacatgttcacaagttg-ttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    ||||||||||||||||  | |||||| |||| ||||||||| ||||||| ||  | ||||| ||||||||||||||||    
T  30552635 acaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagtttatgaaaataattta 30552712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 32614940 - 32614985
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataa 128  Q
    ||||||||||||||||||| | ||||||||||| ||||| ||||||    
T  32614940 acaacttatgacatgttcatatgttgttttcagattattctcataa 32614985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 33256814 - 33256749
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||| ||  |||| |||||||||||||||| |  ||||| ||| |||||||||||    
T  33256814 cttatgacatgttcataaactgttctcagcttattttcatacggtcttcaggatggcttatgaaaa 33256749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 36415666 - 36415734
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| |||||| || |||||||||||| ||||||||| ||||  || || |||||||||||||||    
T  36415666 acaacttat-acatgtgcataagttgttttcatcttattttcgtaagttctacatgatagcttatgaaaa 36415734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 40158792 - 40158727
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||| | ||||||||||||||||| || ||||||| || ||  ||| ||||||||||    
T  40158792 cttatgacatgtttataagttgttttcagcttaattacataagctctccagaataacttatgaaaa 40158727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 42817368 - 42817437
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| | |||||||  |||||||||| |||||| || ||||||| |||||  ||||||||||||||    
T  42817368 acaacttacggcatgttcttaagttgtttttagcttacttccataagctcttcagaatagcttatgaaaa 42817437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 44644328 - 44644287
Alignment:
Q  111 ttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||| ||||||||||| || ||||||    
T  44644328 ttcagcttattttcataagctcttcaagatagtttttgaaaa 44644287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 45314946 - 45314901
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataa 128  Q
    |||||||||||||| || | ||||||||||||| ||||||||||||    
T  45314946 acaacttatgacatatttataagttgttttcagtttattttcataa 45314901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 6772516 - 6772584
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 155  Q
    ||||||||||  ||| ||| | ||||||||||| |||||||||| || | ||||| |||||||||||||    
T  6772516 cttatgacataatcataagcttttttcagcttactttcataagctctcctagataccttatgaaaataa 6772584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 24097861 - 24097817
Alignment:
Q  108 gttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||||||| || || |||| ||||||||||    
T  24097861 gttttcagcttattttcataagctctccaggataacttatgaaaa 24097817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 43635095 - 43635159
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 149  Q
    ||||||||||||||    ||| |||||| |||||||||||||||||  |||| ||||||||||||    
T  43635095 aacttatgacatgtctgtaagctgttttaagcttattttcataagcttttcatgatagcttatga 43635159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 17258879 - 17258944
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||| |||||||||    
T  17258879 cttatgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaaa 17258944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 11707128 - 11707064
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| | ||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  11707128 ttatgacatgtttataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaa 11707064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 12242704 - 12242791
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    |||||||||||||  ||  |||||||||||||||| || ||||||| || |||||||||||||||||| ||||| ||| |||||||||    
T  12242704 aacttatgacatgaacattagttgttttcagcttacttccataagctctccaagatagcttatgaaaacaatttgactctattttatc 12242791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 37611207 - 37611282
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 158  Q
    ||||||| ||||||||||| ||| ||||||||| |||||| ||||||| || |||||||||||||||||| |||||    
T  37611207 acaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaattt 37611282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 37787937 - 37788012
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 158  Q
    ||||||| ||||||||||| ||| ||||||||| |||||| ||||||| || |||||||||||||||||| |||||    
T  37787937 acaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaattt 37788012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 10125710 - 10125787
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaa 160  Q
    ||||||||||||||||| | ||| |||||||||||||||||||||||| || || | || ||||||||||||| ||||    
T  10125710 acaacttatgacatgttgataaggtgttttcagcttattttcataagctctccatggtaacttatgaaaataacttaa 10125787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 13604845 - 13604910
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || | |||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  13604845 cttatgacatgtccatacgttgttttcaacttattttcataagctcttcaagataacttatgaaaa 13604910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 36639596 - 36639531
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| ||| || |||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  36639596 cttatgacgtgtccataagttgttttcctcttattttcataagctcttcaagatagcttatgaaaa 36639531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 12459993 - 12460060
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaa 150  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||||| || ||||||||||| ||||    
T  12459993 acaacttatgacatgttcatatgttgtttttggcttattttcataagctctgcaagatagcttgtgaa 12460060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 7674726 - 7674657
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||| | ||| ||||||||||||||||||| ||   || ||||||||||||||||||    
T  7674726 acaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaa 7674657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 10272423 - 10272492
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||    |||||||||||||||||||||||||| | || |||||| |||||||||||    
T  10272423 acaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaa 10272492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 17368754 - 17368685
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||| | |  ||||||||||||||| ||||| | || ||||||||||||||||||    
T  17368754 acaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaa 17368685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 4014429 - 4014485
Alignment:
Q  96 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||| ||| |||||||||||||||||||||||  || ||||||||||||||||||    
T  4014429 tgttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaa 4014485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 12521602 - 12521542
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||||| |||||| |||||||||    
T  12521602 cttatgatatgttcataagctgttttcagcttatttccataagctcttcaaaatagcttat 12521542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 32408588 - 32408660
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    |||||||||||| |  |||||| |||| |||||||| ||||||| ||||| ||||||||||||||||| ||||    
T  32408588 cttatgacatgtccgtaagttggtttctgcttatttccataagctcttcaggatagcttatgaaaatagttta 32408660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 33533536 - 33533600
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||| |||| |||||||||||| ||||||| ||||||| || ||||||||||| ||||||    
T  33533536 ttatgacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaa 33533600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 12467211 - 12467164
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  12467211 acaacttatgacatgtttataagctgttttcagcttattttcataagc 12467164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 25461310 - 25461377
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||  || ||||||||||||||||||||||  ||  |||||||| |||||||||    
T  25461310 aacttatgacatgttcattagctgttttcagcttattttcataaatacgccaagataggttatgaaaa 25461377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 985689 - 985600
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta--tgaaaataatttaactttattttatc 172  Q
    |||||||||||||| ||||||  ||||||||||||||| ||||  | ||||| |||||||||  |||||| | ||| |||||||||||||    
T  985689 aacttatgacatgtccacaagcggttttcagcttatttccatagtctcttcatgatagcttatgtgaaaacagtttgactttattttatc 985600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 9202743 - 9202809
Alignment:
Q  87 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| ||||| ||| ||||| |||||||||||||||||  |||||||||| ||||||||||    
T  9202743 cttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaa 9202809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 499727 - 499768
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataa 128  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  499727 cttatgacatgttaacaagttgttttcagcttatttccataa 499768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 2092537 - 2092606
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| ||||| || |||||||||||| ||| ||||||||| | ||||||||||| | |||||||    
T  2092537 acaacttatggcatgtccataagttgttttcaactttttttcataaacccttcaagatagttaatgaaaa 2092606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 2568732 - 2568667
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| |||| ||||| |||| ||||||||||||| ||| || || |||||||||||||||    
T  2568732 cttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaa 2568667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 7319020 - 7319069
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||| ||||||||||||||||||  || ||||||||||||||||||    
T  7319020 aagttgttctcagcttattttcataagttctccaagatagcttatgaaaa 7319069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 8090014 - 8089957
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagat 140  Q
    ||||||||||| || |||  ||| |||||||||||||||||||||||| |||||||||    
T  8090014 acaacttatgatatattcctaagctgttttcagcttattttcataagctcttcaagat 8089957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 18543193 - 18543257
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| ||  |||||||||||||||| |||||||||| || || |||||||||||||||    
T  18543193 cttatgacatgtccatgagttgttttcagctta-tttcataagctctccaggatagcttatgaaaa 18543257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 18906400 - 18906351
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||||||||||||  ||||||  ||||||||||||||||||||    
T  18906400 aagttgttttcagcttatttcgataagcttttcaagatagcttatgaaaa 18906351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 21768193 - 21768258
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || | | |||||||| ||||||||| ||||| |||||||||| ||||||||||    
T  21768193 cttatgacatgtccatacgctgttttcaacttattttcgtaagctcttcaagataacttatgaaaa 21768258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 26209409 - 26209474
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||| ||||| |||||| ||||||||| |||||  ||||| ||||||| |||||||||||||||    
T  26209409 cttatggcatgtccacaagctgttttcagattattcgcataaacacttcatgatagcttatgaaaa 26209474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 41957447 - 41957512
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| || |||||||||||| ||||||||||||||  ||  | |||||||||||||||    
T  41957447 cttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaa 41957512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 5284445 - 5284509
Alignment:
Q  88 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| || ||| | |||||||||||||||||| ||| ||||| |||||| ||||||||    
T  5284445 ttatgacatgtccataagcttttttcagcttattttcattagctcttcatgatagcctatgaaaa 5284509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 7985034 - 7984978
Alignment:
Q  96 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||| ||| ||||||||||||||||||||||   || ||||||||||||||||||    
T  7985034 tgttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaa 7984978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 38104869 - 38104917
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  38104869 aagttgttttcagcttatttccataagctctctaagatagcttatgaaa 38104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 38829647 - 38829695
Alignment:
Q  102 caagttgttttcagcttattttcataagcacttcaagatagcttatgaa 150  Q
    |||| ||||||| || ||||||||||||| |||||||||||||||||||    
T  38829647 caagctgttttcggcatattttcataagctcttcaagatagcttatgaa 38829695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 3237156 - 3237102
Alignment:
Q  98 ttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| ||||||| |||||| ||||||||||||| ||| | |||||||||||||||    
T  3237156 ttcataagttgtgttcagcatattttcataagctctttaggatagcttatgaaaa 3237102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 7907944 - 7907890
Alignment:
Q  98 ttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||| ||||||||||||||||| |||||||||| || ||||| ||||||| ||||    
T  7907944 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 7907890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 32545108 - 32545046
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 149  Q
    ||||||||||||  ||||  | ||||||| |||||||||||||| || |||||||||||||||    
T  32545108 cttatgacatgtctacaatctattttcagattattttcataagctctccaagatagcttatga 32545046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 39105539 - 39105473
Alignment:
Q  87 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||| ||||| ||| | |||| ||||||||||||||||  || ||||||||||||||||||    
T  39105539 cttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaa 39105473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 1899228 - 1899187
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataa 128  Q
    |||||||||||| || |||||||||||||||||||| |||||    
T  1899228 cttatgacatgtgcataagttgttttcagcttatttccataa 1899187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 11700370 - 11700415
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataa 128  Q
    |||||||||||||||| || ||| ||||||||| ||||||||||||    
T  11700370 acaacttatgacatgtccataagctgttttcagattattttcataa 11700415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 12425629 - 12425580
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||| ||||||||||||||  || ||||||||||| ||||||    
T  12425629 aagttgttttcaacttattttcataagttctccaagatagcttgtgaaaa 12425580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 32172731 - 32172662
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||| || |||   |||||||||||||| ||| ||  ||||| |||||||||||||||    
T  32172731 acaacttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatgaaaa 32172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 32194073 - 32194134
Alignment:
Q  85 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta 146  Q
    |||||||||||| | || ||||||||||||||||||||  |||||| ||  |||||||||||    
T  32194073 aacttatgacatttccataagttgttttcagcttatttatataagctctcaaagatagctta 32194134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 32897535 - 32897466
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    ||||||||||| || |||| ||  ||||||| |||||||||||||||| |||  ||||||| ||||||||    
T  32897535 acaacttatgatattttcataacctgttttctgcttattttcataagctctttgagatagcgtatgaaaa 32897466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 35963313 - 35963272
Alignment:
Q  89 tatgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    |||||||||| || |||||||||||||||||||| |||||||    
T  35963313 tatgacatgtccataagttgttttcagcttatttccataagc 35963272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 36774703 - 36774788
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 172  Q
    |||||||||||| |  ||| || ||||||||||||| ||||||| || || |||||||||| |||| | ||| ||||| |||||||    
T  36774703 cttatgacatgtcctaaagatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatc 36774788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 39594865 - 39594816
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 152  Q
    |||||||||||||||||||||||||||  |  ||||||| ||||||||||    
T  39594865 aagttgttttcagcttattttcataagttcaacaagatatcttatgaaaa 39594816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 1465032 - 1465076
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    ||||||||||||||||||||||| |||  || |||||||||||||    
T  1465032 aagttgttttcagcttattttcacaagtcctccaagatagcttat 1465076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 8177528 - 8177584
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagc 143  Q
    ||||||| |||| || ||||||||||||| |||||||||||||| || || ||||||    
T  8177528 cttatgatatgtccataagttgttttcaggttattttcataagctctccaggatagc 8177584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 10303867 - 10303827
Alignment:
Q  90 atgacatgttcacaagttgttttcagcttattttcataagc 130  Q
    ||||||||| || |||||||| |||||||||||||||||||    
T  10303867 atgacatgtccataagttgttgtcagcttattttcataagc 10303827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 13264101 - 13264172
Alignment:
Q  87 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 159  Q
    |||||| ||| |||| ||| ||||||||||||||||| |||||| ||||| |||||| | |||||||| ||||    
T  13264101 cttatgccatattcataagctgttttcagcttatttt-ataagctcttcatgatagcatgtgaaaatagttta 13264172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 18637039 - 18637083
Alignment:
Q  110 tttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    |||||||||||||||||||   ||||||||||||| |||||||||    
T  18637039 tttcagcttattttcataatatcttcaagatagctaatgaaaata 18637083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 19460405 - 19460449
Alignment:
Q  110 tttcagcttattttcataagcacttcaagatagcttatgaaaata 154  Q
    ||||||||||||||||||||  ||| |||||| ||||||||||||    
T  19460405 tttcagcttattttcataagttcttgaagataacttatgaaaata 19460449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 20028502 - 20028550
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    ||||||||||||||||||||  |||||| |||||  |||||||||||||    
T  20028502 aagttgttttcagcttatttctataagctcttcataatagcttatgaaa 20028550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 29116966 - 29117033
Alignment:
Q  107 tgttttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 172  Q
    |||||||||||||||| |||||||  |||| ||||||||||  ||||| | ||| |||||||||||||    
T  29116966 tgttttcagcttatttgcataagcttttcaggatagcttatacgaaaacagtttgactttattttatc 29117033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 4927 - 4991
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 147  Q
    ||||||||| ||||||||| |||||||||||||||||  | ||||||| || |||| ||||||||    
T  4927 acaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 4991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 12696 - 12758
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt 145  Q
    |||||||||||||||| || |||||||||||||||||  | ||||||| ||  ||||||||||    
T  12696 acaacttatgacatgtccataagttgttttcagcttagctccataagctctctaagatagctt 12758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 33639 - 33687
Alignment:
Q  103 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 151  Q
    |||||||||||||||||||| ||||||| |||||  |||||||||||||    
T  33639 aagttgttttcagcttatttccataagctcttcataatagcttatgaaa 33687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 10609 - 10664
Alignment:
Q  83 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaag 138  Q
    |||||| ||||||||| || |||||||||||||||||||| ||||| |||| ||||    
T  10609 acaactaatgacatgtccataagttgttttcagcttatttccataaacactacaag 10664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 14666 - 14614
Alignment:
Q  105 gttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatt 157  Q
    ||||||||||||||||||| |||| | ||||||||||  |||| |||||||||    
T  14666 gttgttttcagcttatttttataaactcttcaagatattttataaaaataatt 14614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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