View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0424_low_38 (Length: 226)
Name: NF0424_low_38
Description: NF0424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0424_low_38 |
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Alignment Details
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 8015328 - 8015526
Alignment:
| Q |
18 |
caaaatgcttactgcaactgataaatcaatgccaaagactgatataatgatgataaagctt---ggttaaaatgaatttgagactgagataatgaa---- |
110 |
Q |
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| T |
8015328 |
caaaatgcttactgcagctgataaatcaatgccaaagactgatataatgatgataaagcttcttggttaaaatgaatttgagactgagataatgaagaat |
8015427 |
T |
|
| Q |
111 |
---------taataagccacccctattactaagttaacatatgcccaagccaagaaataaacctggagcacacataagacaccccaaaacaatccttaa |
200 |
Q |
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| T |
8015428 |
actactgaataataagccacccctattactaagttaacatatgcccaagccaagaaataaacctggagcacacataagacaccccaaaacaatccttaa |
8015526 |
T |
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