View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0424_low_39 (Length: 226)
Name: NF0424_low_39
Description: NF0424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0424_low_39 |
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Alignment Details
Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 99 - 218
Target Start/End: Original strand, 9465856 - 9465971
Alignment:
| Q |
99 |
cacagatctcaaaatcaaaagaaatgaatgagggagggagggagagagaggtatgcctatggagtgagaacctgagagtgaaaccagggaaagaggaatg |
198 |
Q |
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|||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |
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| T |
9465856 |
cacagatctcaaaatcaaaagaaatgaaagagggagagaa----agagaggtatgcctatggagtgagaacctgggagtgaaaccagagaaagaggaatg |
9465951 |
T |
|
| Q |
199 |
atggtgaaggtgaaagtgac |
218 |
Q |
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| T |
9465952 |
acggtgaaggtgaaggtgac |
9465971 |
T |
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