View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0426_high_4 (Length: 258)

Name: NF0426_high_4
Description: NF0426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0426_high_4
NF0426_high_4
[»] chr8 (1 HSPs)
chr8 (24-175)||(8931501-8931652)


Alignment Details
Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 8931501 - 8931652
Alignment:
24 catcaaaagatgcagaattcaaacccttactatcatgatcatgaccattttcagcaccaccaacatcaaaaggtgtagactttgtagaatccaaaccctt 123  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
8931501 catcaaaagatgcagaaatcaaacccttactatcatgatcatgaccattttcagcaccaccaacatcaaaaggtgtagactttgtagaatccaaaccgtt 8931600  T
124 atgatcatgatcatgactattttcaacagaattcaacaaattagaaacaaaa 175  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||    
8931601 atcatcatgatcatgactattttcaacagaattcaacaaattagaaacaaaa 8931652  T

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