View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0426_low_1 (Length: 569)

Name: NF0426_low_1
Description: NF0426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0426_low_1
NF0426_low_1
[»] chr7 (34 HSPs)
chr7 (160-542)||(16186037-16186419)
chr7 (1-71)||(46580915-46580985)
chr7 (1-71)||(11092657-11092727)
chr7 (1-71)||(14981675-14981745)
chr7 (1-70)||(16998393-16998462)
chr7 (1-71)||(11084915-11084985)
chr7 (1-71)||(15112754-15112824)
chr7 (1-71)||(32161083-32161153)
chr7 (1-71)||(15116294-15116364)
chr7 (1-70)||(1490305-1490374)
chr7 (1-70)||(14273315-14273384)
chr7 (1-70)||(15719796-15719865)
chr7 (11-71)||(16323872-16323932)
chr7 (11-70)||(16550888-16550947)
chr7 (11-70)||(16614715-16614774)
chr7 (1-70)||(16185890-16185958)
chr7 (4-67)||(14157223-14157286)
chr7 (23-71)||(17232740-17232788)
chr7 (12-60)||(41284123-41284171)
chr7 (21-70)||(14258271-14258320)
chr7 (23-71)||(8468539-8468587)
chr7 (26-70)||(16461016-16461060)
chr7 (26-70)||(16579584-16579628)
chr7 (26-70)||(16586035-16586079)
chr7 (24-71)||(8940083-8940130)
chr7 (12-71)||(10501538-10501596)
chr7 (23-70)||(11392123-11392170)
chr7 (26-70)||(32301123-32301167)
chr7 (24-71)||(9320595-9320642)
chr7 (28-70)||(38519335-38519377)
chr7 (26-70)||(9033462-9033507)
chr7 (10-51)||(16251436-16251477)
chr7 (26-70)||(11661233-11661277)
chr7 (34-70)||(32301077-32301113)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-71)||(7181-7251)
[»] chr3 (29 HSPs)
chr3 (1-71)||(52989962-52990032)
chr3 (1-70)||(17691959-17692028)
chr3 (4-71)||(24513754-24513821)
chr3 (1-71)||(22651954-22652024)
chr3 (1-70)||(17685770-17685839)
chr3 (3-70)||(35961772-35961839)
chr3 (10-71)||(11914256-11914317)
chr3 (1-71)||(14965979-14966049)
chr3 (1-71)||(24178762-24178832)
chr3 (1-70)||(21837225-21837294)
chr3 (4-61)||(45220417-45220474)
chr3 (1-70)||(5841767-5841836)
chr3 (1-70)||(54876641-54876710)
chr3 (4-71)||(3265130-3265197)
chr3 (4-55)||(52466472-52466523)
chr3 (21-70)||(16796324-16796373)
chr3 (10-71)||(36527688-36527749)
chr3 (26-70)||(18700558-18700602)
chr3 (24-71)||(6808076-6808123)
chr3 (10-69)||(49970165-49970224)
chr3 (26-70)||(324070-324114)
chr3 (26-70)||(9577586-9577630)
chr3 (26-70)||(10542508-10542552)
chr3 (26-66)||(12469736-12469776)
chr3 (26-70)||(43889867-43889911)
chr3 (20-70)||(32403075-32403125)
chr3 (157-190)||(17044244-17044277)
chr3 (26-70)||(15245979-15246023)
chr3 (26-70)||(15265100-15265144)
[»] chr2 (17 HSPs)
chr2 (1-71)||(27472230-27472300)
chr2 (1-71)||(34874452-34874522)
chr2 (4-71)||(24681230-24681297)
chr2 (1-70)||(21914721-21914790)
chr2 (10-71)||(23707528-23707589)
chr2 (4-71)||(24917924-24917991)
chr2 (1-70)||(24316335-24316404)
chr2 (4-65)||(24670809-24670870)
chr2 (1-70)||(34492376-34492445)
chr2 (1-67)||(27485376-27485442)
chr2 (1-71)||(37379401-37379471)
chr2 (1-70)||(13101762-13101831)
chr2 (4-71)||(22459802-22459869)
chr2 (1-71)||(21081976-21082046)
chr2 (26-70)||(39828109-39828153)
chr2 (26-70)||(34136901-34136945)
chr2 (26-70)||(21073608-21073652)
[»] chr1 (24 HSPs)
chr1 (1-71)||(11809491-11809561)
chr1 (4-71)||(50000576-50000643)
chr1 (1-71)||(25263083-25263153)
chr1 (1-70)||(29764522-29764591)
chr1 (4-71)||(43630374-43630441)
chr1 (1-71)||(51326592-51326662)
chr1 (1-70)||(23072973-23073042)
chr1 (1-71)||(12271365-12271435)
chr1 (1-67)||(27653476-27653542)
chr1 (4-71)||(10492039-10492106)
chr1 (2-70)||(636116-636184)
chr1 (21-70)||(22131146-22131195)
chr1 (21-66)||(48603273-48603318)
chr1 (26-70)||(48520347-48520391)
chr1 (24-67)||(8882095-8882138)
chr1 (26-70)||(14800490-14800534)
chr1 (26-70)||(14809364-14809408)
chr1 (26-70)||(20958069-20958113)
chr1 (26-70)||(21043397-21043441)
chr1 (1-71)||(46198592-46198652)
chr1 (26-70)||(23967675-23967719)
chr1 (26-70)||(28312475-28312519)
chr1 (30-70)||(47190566-47190606)
chr1 (26-70)||(48520293-48520337)
[»] scaffold0022 (1 HSPs)
scaffold0022 (4-71)||(54078-54145)
[»] chr8 (15 HSPs)
chr8 (4-71)||(22238258-22238325)
chr8 (1-71)||(23409606-23409676)
chr8 (1-70)||(23478179-23478248)
chr8 (1-54)||(14103259-14103312)
chr8 (1-70)||(19879927-19879996)
chr8 (24-70)||(17461303-17461349)
chr8 (25-70)||(37515487-37515532)
chr8 (21-70)||(44384910-44384959)
chr8 (23-70)||(37515538-37515585)
chr8 (20-70)||(16799441-16799491)
chr8 (26-70)||(5760517-5760561)
chr8 (1-55)||(12576930-12576984)
chr8 (26-70)||(22253280-22253324)
chr8 (26-70)||(28397511-28397555)
chr8 (24-71)||(32807203-32807251)
[»] chr6 (22 HSPs)
chr6 (4-71)||(17378037-17378104)
chr6 (1-71)||(18927709-18927779)
chr6 (1-70)||(15174339-15174408)
chr6 (1-71)||(28104139-28104209)
chr6 (3-70)||(18913757-18913824)
chr6 (3-70)||(18937015-18937082)
chr6 (1-71)||(15875194-15875264)
chr6 (1-70)||(28708460-28708529)
chr6 (1-61)||(15687912-15687972)
chr6 (11-60)||(19953194-19953243)
chr6 (21-70)||(19773784-19773833)
chr6 (24-71)||(2201058-2201105)
chr6 (10-69)||(19399638-19399697)
chr6 (24-71)||(22420906-22420953)
chr6 (28-70)||(17743215-17743257)
chr6 (26-68)||(22805758-22805800)
chr6 (26-70)||(19656253-19656297)
chr6 (26-70)||(20078286-20078330)
chr6 (26-70)||(27573163-27573207)
chr6 (26-67)||(18453143-18453184)
chr6 (26-70)||(17743159-17743203)
chr6 (26-70)||(27573109-27573153)
[»] scaffold0780 (1 HSPs)
scaffold0780 (4-70)||(3578-3644)
[»] scaffold0577 (1 HSPs)
scaffold0577 (1-71)||(7743-7813)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-67)||(27-93)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-71)||(78214-78284)
[»] chr5 (11 HSPs)
chr5 (1-71)||(19076320-19076390)
chr5 (1-70)||(17010824-17010893)
chr5 (1-71)||(262958-263027)
chr5 (1-71)||(29447814-29447884)
chr5 (1-71)||(41861577-41861647)
chr5 (10-60)||(31252802-31252852)
chr5 (21-70)||(22107675-22107724)
chr5 (24-67)||(24212307-24212350)
chr5 (24-67)||(35852562-35852605)
chr5 (28-70)||(23469766-23469808)
chr5 (26-70)||(33895886-33895929)
[»] chr4 (17 HSPs)
chr4 (1-71)||(9923182-9923252)
chr4 (4-71)||(14746823-14746890)
chr4 (1-71)||(26013292-26013362)
chr4 (1-66)||(11479612-11479677)
chr4 (1-70)||(40619636-40619705)
chr4 (1-71)||(37838835-37838905)
chr4 (1-71)||(42597564-42597634)
chr4 (1-70)||(15497277-15497346)
chr4 (2-70)||(15884299-15884367)
chr4 (21-70)||(17048375-17048424)
chr4 (23-70)||(13592166-13592213)
chr4 (20-70)||(13592219-13592269)
chr4 (26-70)||(53631497-53631541)
chr4 (23-70)||(10695131-10695177)
chr4 (23-70)||(10908897-10908943)
chr4 (30-67)||(15791739-15791776)
chr4 (26-70)||(24047415-24047459)
[»] scaffold0076 (1 HSPs)
scaffold0076 (4-71)||(24835-24902)
[»] scaffold0019 (1 HSPs)
scaffold0019 (4-71)||(21765-21832)
[»] scaffold0802 (1 HSPs)
scaffold0802 (1-71)||(5653-5723)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-71)||(70704-70774)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-71)||(67072-67142)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-71)||(77798-77868)
scaffold0014 (4-71)||(126841-126908)
[»] scaffold0877 (1 HSPs)
scaffold0877 (1-70)||(2964-3033)
[»] scaffold0462 (1 HSPs)
scaffold0462 (1-70)||(10320-10389)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-70)||(2125-2194)
[»] scaffold0741 (1 HSPs)
scaffold0741 (4-71)||(6992-7059)
[»] scaffold0317 (1 HSPs)
scaffold0317 (4-71)||(7142-7209)
[»] scaffold0515 (1 HSPs)
scaffold0515 (1-71)||(4130-4200)
[»] scaffold0436 (1 HSPs)
scaffold0436 (1-71)||(7967-8037)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-71)||(4130-4200)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-71)||(169989-170059)
[»] scaffold0004 (1 HSPs)
scaffold0004 (10-71)||(362717-362778)
[»] scaffold0679 (1 HSPs)
scaffold0679 (1-70)||(2674-2743)
[»] scaffold0356 (1 HSPs)
scaffold0356 (1-54)||(696-749)
[»] scaffold0335 (1 HSPs)
scaffold0335 (10-71)||(699-760)
[»] scaffold0561 (1 HSPs)
scaffold0561 (4-71)||(10412-10479)
[»] scaffold0037 (1 HSPs)
scaffold0037 (10-60)||(69152-69202)
[»] scaffold0599 (1 HSPs)
scaffold0599 (26-71)||(1532-1577)
[»] scaffold0010 (1 HSPs)
scaffold0010 (26-70)||(608-652)
[»] scaffold0009 (1 HSPs)
scaffold0009 (23-71)||(85367-85415)
[»] scaffold0156 (1 HSPs)
scaffold0156 (24-70)||(15565-15611)
[»] scaffold0815 (1 HSPs)
scaffold0815 (10-51)||(419-460)
[»] scaffold0484 (1 HSPs)
scaffold0484 (21-70)||(673-722)
[»] scaffold0165 (2 HSPs)
scaffold0165 (21-66)||(3524-3569)
scaffold0165 (21-66)||(7588-7633)
[»] scaffold0096 (2 HSPs)
scaffold0096 (26-70)||(21017-21061)
scaffold0096 (26-70)||(20963-21007)
[»] scaffold0011 (2 HSPs)
scaffold0011 (26-70)||(38267-38311)
scaffold0011 (26-70)||(125781-125825)
[»] scaffold0123 (1 HSPs)
scaffold0123 (28-70)||(365-407)
[»] scaffold0107 (1 HSPs)
scaffold0107 (26-71)||(36141-36186)
[»] scaffold1283 (1 HSPs)
scaffold1283 (26-70)||(1491-1535)
[»] scaffold0452 (1 HSPs)
scaffold0452 (26-70)||(13627-13671)
[»] scaffold0347 (1 HSPs)
scaffold0347 (26-70)||(8851-8895)
[»] scaffold0034 (3 HSPs)
scaffold0034 (26-70)||(117192-117236)
scaffold0034 (26-70)||(117138-117182)
scaffold0034 (34-70)||(119842-119878)
[»] scaffold0396 (1 HSPs)
scaffold0396 (26-68)||(1855-1897)
[»] scaffold0282 (1 HSPs)
scaffold0282 (26-68)||(18285-18327)
[»] scaffold0500 (1 HSPs)
scaffold0500 (26-70)||(7511-7555)
[»] scaffold0359 (1 HSPs)
scaffold0359 (26-70)||(15416-15460)
[»] scaffold0278 (1 HSPs)
scaffold0278 (26-70)||(7615-7659)
[»] scaffold0074 (1 HSPs)
scaffold0074 (34-70)||(8130-8166)
[»] scaffold0046 (1 HSPs)
scaffold0046 (26-70)||(17032-17076)
[»] scaffold0001 (1 HSPs)
scaffold0001 (26-66)||(497387-497427)


Alignment Details
Target: chr7 (Bit Score: 334; Significance: 0; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 160 - 542
Target Start/End: Original strand, 16186037 - 16186419
Alignment:
Q  160 tttccatcataatatcataattcatcaattagagttcgttaaatcacccatcaattatgtaattataaatccaaattgttttgtttgcgcaagtttcaat 259  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16186037 tttccatcataatatcataattcattaattagagttcgttaaatcacccatcaattatgtaattataaatccaaattgttttgtttgcgcaagtttcaat 16186136  T
Q  260 tgtatttcnnnnnnngagtattgttcaaaataacaaatccaagatcacaaaatgatcaaagtgcatgaaatcaagggatgctgattcataaaaaattgag 359  Q
    ||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16186137 tgtatttcaaaaaaagagtattgatcaaaataacaaatccaagatcacaaaatgatcaaagtgcatgaaatcaagggatgctgattcataaaaaattgag 16186236  T
Q  360 ctagtaataacaataaaatctttaagatgacaaaataaaactagaaagactaatgatatttccattcatccatcaagaagaaaacaagttggaattataa 459  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16186237 ctagtaataacaataaaatctttaagatgacaaaataaaactagaaagactaatgatatttccattcatccatcaagaagaaaacaagttggaaatataa 16186336  T
Q  460 gtacgacacgaaactcttataagccaaagaccaaaaatagaagaagtaacatcctatataaacacgtgtaacatgaagaattc 542  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  16186337 gtacgacacaaaactcttataagccaaaggccaaaaataaaagaagtaacatcctatataaccacgtgtaacatgaagaattc 16186419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 46580985 - 46580915
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46580985 aacaacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 46580915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11092657 - 11092727
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11092657 aacaacagcttcaactacaacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 11092727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14981745 - 14981675
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14981745 aacaacagcttcaactccgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 14981675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16998393 - 16998462
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  16998393 aacaacagcttcaactacgacttcaacaacttagacaacattaacaacttaaggctccaatactttggaa 16998462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11084915 - 11084985
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  11084915 aacaacagcttcaactacaacttcaaaaacttagacaacattaacaacttaagactccaatactttggaaa 11084985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15112754 - 15112824
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  15112754 aacaacaacttcaactacgacttcaacaacttagacaacattaacaacttaagattccaatactttggaaa 15112824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32161153 - 32161083
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  32161153 aacaacagcttcaactacgacttcaacaacttagataacattaacaacttaagactccaatactttagaaa 32161083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15116294 - 15116364
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  ||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  15116294 aacaacaacttcaactacgacttcaacaacttagacaatattaacaacttaagattccaatactttggaaa 15116364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1490374 - 1490305
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| |||||||||||||| | ||||||||||||||  ||||||||||||||||||||||||||||    
T  1490374 aacaacagcttcaactacgactttaccaacttagacaacatcaacaacttaagactccaatactttggaa 1490305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14273315 - 14273384
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||  |||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  14273315 aacaacaacttcaactaagacttcaacaacttaaacaacattaacaacttaagactccaatactttggaa 14273384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15719796 - 15719865
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| || ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  15719796 aacaacagcttaaactacgacttcaacaacttagacaacatcaacaacttaggactccaatactttggaa 15719865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 16323872 - 16323932
Alignment:
Q  11 tcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  16323872 tcaactacgacttaaacaacttagacaacattaacaacttaagattccaatactttggaaa 16323932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 16550947 - 16550888
Alignment:
Q  11 tcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  16550947 tcaactacgacttcaacaacttagacaacatcaacaccttaagactccaatactttggaa 16550888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 16614715 - 16614774
Alignment:
Q  11 tcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  16614715 tcaactacgacttcaacaacttagacaacatcaacaccttaagactccaatactttggaa 16614774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16185890 - 16185958
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| ||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||    
T  16185890 aacaacagcttcaactacgactccaacaacttagacagc-ataacaacttaggactccaatactttggaa 16185958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 14157286 - 14157223
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttg 67  Q
    ||||| |||||||||||||||||||  |||||||||| ||||||||||||| ||||||||||||    
T  14157286 aacagcttcaactacgacttcaacattttagacaacattaacaacttaagattccaatactttg 14157223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 17232740 - 17232788
Alignment:
Q  23 tcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17232740 tcaacaacttagacaacattaacaacttaatactccaatactttggaaa 17232788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 41284123 - 41284171
Alignment:
Q  12 caactacgacttcaacaacttagacaacaataacaacttaagactccaa 60  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  41284123 caactacgacttcaacaatttagacaacattaacaacttaagactccaa 41284171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 14258271 - 14258320
Alignment:
Q  21 cttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  14258271 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaa 14258320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 8468539 - 8468587
Alignment:
Q  23 tcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  8468539 tcaacaacttagacaacattaacaacttaatactccaatattttggaaa 8468587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 16461060 - 16461016
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  16461060 acaacttagacaacatcaacaacttaagactccaatactttggaa 16461016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 16579584 - 16579628
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  16579584 acaacttagacaacatcaacaacttaagactccaatactttggaa 16579628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 16586079 - 16586035
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  16586079 acaacttagacaacatcaacaacttaagactccaatactttggaa 16586035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 8940083 - 8940130
Alignment:
Q  24 caacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  8940083 caacaacgtagacaacattaataacttaagactccaatactttggaaa 8940130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 10501596 - 10501538
Alignment:
Q  12 caactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||||||||||||  |||||||||| ||||||||||||| | ||||||||||||||    
T  10501596 caactacgacttcaacattttagacaacattaacaacttaaga-ttcaatactttggaaa 10501538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 11392170 - 11392123
Alignment:
Q  23 tcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  11392170 tcaacaacttagacaacatcaacaacttaaggctccaatactttggaa 11392123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 32301123 - 32301167
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||   |||||||||||||||||||||||||||    
T  32301123 acaacttagacaacatcgacaacttaagactccaatactttggaa 32301167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 9320642 - 9320595
Alignment:
Q  24 caacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||||| ||||||| | ||||||||||||||||||||| ||||||||    
T  9320642 caacaacgtagacaatattaacaacttaagactccaatattttggaaa 9320595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 38519335 - 38519377
Alignment:
Q  28 aacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||| |||||||  ||||||||||||||||||||||||||||    
T  38519335 aacttggacaacatcaacaacttaagactccaatactttggaa 38519377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 9033507 - 9033462
Alignment:
Q  26 acaacttagacaacaataa-caacttaagactccaatactttggaa 70  Q
    |||||||||||||||  || ||||||||||||||||||||||||||    
T  9033507 acaacttagacaacatcaaacaacttaagactccaatactttggaa 9033462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 16251477 - 16251436
Alignment:
Q  10 ttcaactacgacttcaacaacttagacaacaataacaactta 51  Q
    |||||||||||||||||||| |||||||||| |||| |||||    
T  16251477 ttcaactacgacttcaacaatttagacaacattaaccactta 16251436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 11661233 - 11661277
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| | |||||  ||||||||||||||||||||||||||||    
T  11661233 acaacttggtcaacatcaacaacttaagactccaatactttggaa 11661277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 32301077 - 32301113
Alignment:
Q  34 gacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||  ||||||||||||||||||||||||||||    
T  32301077 gacaacatcaacaacttaagactccaatactttggaa 32301113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7251 - 7181
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7251 aacaacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 7181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 52990032 - 52989962
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52990032 aacaacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 52989962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17692028 - 17691959
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17692028 aacaacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaa 17691959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 24513754 - 24513821
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24513754 aacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 24513821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22651954 - 22652024
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  22651954 aacaacagcttcaactacgacttcaacaacttagacaacattaacaatttaagactccaatactttggaaa 22652024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17685839 - 17685770
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  17685839 aacaacagcttcaactacgacttcaacaacttagataacattaacaacttaagactccaatactttggaa 17685770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 35961839 - 35961772
Alignment:
Q  3 caacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  35961839 caacagcttcaactacgacttcaacaacttagacaacatcaacaacttaagactccaatactttggaa 35961772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 11914317 - 11914256
Alignment:
Q  10 ttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11914317 ttcaactacgacttcgacaacttagacaacattaacaacttaagactccaatactttggaaa 11914256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14965979 - 14966049
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| || |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  14965979 aacaatagcttcagctacgacttcaacaacttagacaacattgacaacttaagactccaatactttggaaa 14966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24178832 - 24178762
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  |||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  24178832 aacaacaacttcaactacgacttcaacaacttagacaacatcaacaccttaagactccaatactttggaaa 24178762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21837225 - 21837294
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| |||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||    
T  21837225 aacaacagcttcaactacgacttcaacaacttagataatatcaacaacttaagactccaatactttggaa 21837294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 45220474 - 45220417
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaat 61  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45220474 aacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaat 45220417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5841767 - 5841836
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||  |||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||    
T  5841767 aacaacaacttcaactacgacttcaacaacttatacaacatcaacaacttaaggctccaatactttggaa 5841836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 54876710 - 54876641
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||  |||||||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||    
T  54876710 aacaacaacttcaactacgacttcaacaactcagacaacattaacaacttaagacttcaatattttggaa 54876641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 3265197 - 3265130
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| |||||||||||||| ||||  |||||||||| ||||||||||||| ||||||||||||||||    
T  3265197 aacagcttcaactacgactttaacattttagacaacattaacaacttaagattccaatactttggaaa 3265130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 52466523 - 52466472
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagac 55  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  52466523 aacagattcaactacgacttcaacaacttagacaacattaacaacttaagac 52466472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 16796324 - 16796373
Alignment:
Q  21 cttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  16796324 cttcaacaacttagacaacatcaacaacttaagactccaatactttggaa 16796373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 36527688 - 36527749
Alignment:
Q  10 ttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||||  |||||||||| ||||||||||||| ||||||||||||||||    
T  36527688 ttcaactatgacttcaacattttagacaacattaacaacttaagattccaatactttggaaa 36527749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 18700602 - 18700558
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  18700602 acaacttagacaacatcaacaacttaagactccaatactttggaa 18700558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 6808076 - 6808123
Alignment:
Q  24 caacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  6808076 caacaacgtagacaacattaacaacttaagacttcaatactttggaaa 6808123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 49970224 - 49970165
Alignment:
Q  10 ttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttgga 69  Q
    ||||||||||||||| |||| || ||||||| ||||||||||| | ||||||||||||||    
T  49970224 ttcaactacgacttccacaattttgacaacattaacaacttaaaattccaatactttgga 49970165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 324070 - 324114
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||   |||||||||||||||||||||||||||    
T  324070 acaacttagacaacatcgacaacttaagactccaatactttggaa 324114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 9577586 - 9577630
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  |||||||||||||||||| |||||||||    
T  9577586 acaacttagacaacatcaacaacttaagactccaacactttggaa 9577630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 10542552 - 10542508
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||    
T  10542552 acaacttagacaacatcaacaacttaagactccagtactttggaa 10542508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 12469736 - 12469776
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatacttt 66  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  12469736 acaacttagacaacatcaacaacttaagactccaatacttt 12469776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 43889911 - 43889867
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||    
T  43889911 acaacttagataacatcaacaacttaagactccaatactttggaa 43889867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 32403125 - 32403075
Alignment:
Q  20 acttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||| ||||||||||||||||  |||||||||||| ||||| |||||||||    
T  32403125 acttgaacaacttagacaacatcaacaacttaagaatccaacactttggaa 32403075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 17044244 - 17044277
Alignment:
Q  157 gattttccatcataatatcataattcatcaatta 190  Q
    |||||| |||||||||||||||||||||||||||    
T  17044244 gattttgcatcataatatcataattcatcaatta 17044277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 15245979 - 15246023
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  | ||||||| ||||||||||||||||||    
T  15245979 acaacttagacaacatcatcaacttaggactccaatactttggaa 15246023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 15265100 - 15265144
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  | ||||||| ||||||||||||||||||    
T  15265100 acaacttagacaacatcatcaacttaggactccaatactttggaa 15265144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27472230 - 27472300
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27472230 aacaacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 27472300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34874522 - 34874452
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34874522 aacaacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 34874452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 24681230 - 24681297
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24681230 aacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 24681297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21914721 - 21914790
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  21914721 aacaacagcttcaactacgacttcaacaacttagacaacattagcaacttaagactccaatactttggaa 21914790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 23707589 - 23707528
Alignment:
Q  10 ttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23707589 ttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 23707528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 24917924 - 24917991
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  24917924 aacagcttcaactacgacttcaacaacttagacaaaattaacaacttaagactccaatactttggaaa 24917991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24316404 - 24316335
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  24316404 aacaacagctccaactacgacttcaacaacttagacaacattaacaatttaagactccaatactttggaa 24316335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 24670809 - 24670870
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactt 65  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24670809 aacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactt 24670870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34492445 - 34492376
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  34492445 aacaacagcttcaactacgacttcaacaacttatacaacatcaacaacttaagactccaatactttggaa 34492376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27485442 - 27485376
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttg 67  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  27485442 aacaacaacttcaactacgacttcaacaacttagacaacattaacaacttaagaccccaatactttg 27485376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37379401 - 37379471
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  37379401 aacaacagcttcaactacgacttcaacaacttaaacaacattaacaacttaagactctaattctttggaaa 37379471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13101831 - 13101762
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| |||||||||||||||||||||||||||||||  ||| | ||||||||||||||||||||||    
T  13101831 aacaacagcttcaactacgacttcaacaacttagacaacatcaaccatttaagactccaatactttggaa 13101762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 22459869 - 22459802
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| ||||||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  22459869 aacagcttcaactactacttcaacaatttagacaacattaacaacttaagattccaatactttggaaa 22459802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21082046 - 21081976
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  ||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||    
T  21082046 aacaacatcttcaactacgacttcaaaaacatagacaacattaacaacttaacactccaatactttggaaa 21081976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 39828153 - 39828109
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  39828153 acaacttagacaacatcaacaacttaagactccaatactttggaa 39828109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 34136901 - 34136945
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||    
T  34136901 acaacttggacaacatcaacaacttaagactccaatactttggaa 34136945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 21073652 - 21073608
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| | |||||  ||||||||||||||||||||||||||||    
T  21073652 acaacttggtcaacatcaacaacttaagactccaatactttggaa 21073608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11809561 - 11809491
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11809561 aacaacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 11809491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 50000576 - 50000643
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50000576 aacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 50000643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25263153 - 25263083
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  25263153 aacaacagcttcaactacgacttcaacaacttagacaacataaacaacttaagactccaatactttggaaa 25263083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29764591 - 29764522
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29764591 aacaacagcttcaactacgacttcaacaacttagacaacatcaacaacttaagactccaatactttggaa 29764522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 43630441 - 43630374
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  43630441 aacagcttcaactacgacttcaacaacttagaaaacattaacaacttaagactccaatactttggaaa 43630374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 51326592 - 51326662
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51326592 aacaacaacttcaactacaacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 51326662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23072973 - 23073042
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  23072973 aacaacagcttcaactacgacttcaacaacttagacaacatcaacaacttaagtctccaatactttggaa 23073042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12271365 - 12271435
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  12271365 aacaacaacttcaactacaacttcaacaacttagacaacattaacaacttaagattccaatactttggaaa 12271435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27653542 - 27653476
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttg 67  Q
    |||||||  ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  27653542 aacaacatcttcaactacgacttcaacaacttagacaacattatcaacttaagactccaatactttg 27653476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 10492106 - 10492039
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| |||||||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||    
T  10492106 aacagcttcaactacgacttcaacaatttagacaacattaacaacttacgattccaatactttggaaa 10492039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 636184 - 636116
Alignment:
Q  2 acaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| ||||||||||||||||| |||||||||||||  || ||||||||| |||||||||||||||    
T  636184 acaacagcttcaactacgacttcaagaacttagacaacatcaagaacttaagaatccaatactttggaa 636116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 22131195 - 22131146
Alignment:
Q  21 cttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  22131195 cttcaacaacttagacaacatcaacaacttaagactccagtactttggaa 22131146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 48603273 - 48603318
Alignment:
Q  21 cttcaacaacttagacaacaataacaacttaagactccaatacttt 66  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  48603273 cttcaacaacttagacaacatcaacaacttaagactccaatacttt 48603318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 48520347 - 48520391
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  48520347 acaacttagacaacatcaacaacttaagactccaatactttggaa 48520391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 8882095 - 8882138
Alignment:
Q  24 caacaacttagacaacaataacaacttaagactccaatactttg 67  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||    
T  8882095 caacaacgtagacaacactaacaacttaagactccaatactttg 8882138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 14800490 - 14800534
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||    
T  14800490 acaacttggacaacatcaacaacttaagactccaatactttggaa 14800534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 14809364 - 14809408
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||    
T  14809364 acaacttggacaacatcaacaacttaagactccaatactttggaa 14809408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 20958069 - 20958113
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||    
T  20958069 acaacttggacaacatcaacaacttaagactccaatactttggaa 20958113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 21043441 - 21043397
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||    
T  21043441 acaacttggacaacatcaacaacttaagactccaatactttggaa 21043397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 46198652 - 46198592
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||||||||||||||||||          ||||||||||||||||||||||||||||    
T  46198652 aacaacagcttcaactacgacttcaacaactta----------acaacttaagactccaatactttggaaa 46198592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 23967675 - 23967719
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||   |||||||||||||||||||||||||||    
T  23967675 acaacttggacaacatcgacaacttaagactccaatactttggaa 23967719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 28312475 - 28312519
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| | |||||  ||||||||||||||||||||||||||||    
T  28312475 acaacttggtcaacatcaacaacttaagactccaatactttggaa 28312519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 47190566 - 47190606
Alignment:
Q  30 cttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||| ||||  ||||||||||||||||||||||||||||    
T  47190566 cttagataacatcaacaacttaagactccaatactttggaa 47190606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 48520293 - 48520337
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||   |||||||||||||||||||||||||||    
T  48520293 acaacttggacaacatcgacaacttaagactccaatactttggaa 48520337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 54145 - 54078
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  54145 aacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 54078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 22238325 - 22238258
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22238325 aacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 22238258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23409606 - 23409676
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23409606 aacaacagcttcaactccgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 23409676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23478179 - 23478248
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  23478179 aacaacagcttcaactacggcttcaacaacttagacaacatcaacaacttaagactccaatactttggaa 23478248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14103312 - 14103259
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaaga 54  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  14103312 aacaacagcttcaactacgacttcaacaacttagacaacattaacaacttaaga 14103259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19879927 - 19879996
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||  ||| ||||||||||||||||||| | |||||  ||||||||||||||||||||||||||||    
T  19879927 aacaacaacttcgactacgacttcaacaactttggcaacatcaacaacttaagactccaatactttggaa 19879996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 17461349 - 17461303
Alignment:
Q  24 caacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||| || |||||||||||||||||||||||||||||    
T  17461349 caacaacttagacatcattaacaacttaagactccaatactttggaa 17461303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 37515487 - 37515532
Alignment:
Q  25 aacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  37515487 aacaacttagacaacatcaacaacttaagactccaatactttggaa 37515532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 44384959 - 44384910
Alignment:
Q  21 cttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  44384959 cttcaacaacttagacaacatcaacagcttaagactccaatactttggaa 44384910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 37515538 - 37515585
Alignment:
Q  23 tcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||    
T  37515538 tcaacaacttagacaacatcgacaacttaagactccaatactttggaa 37515585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 16799441 - 16799491
Alignment:
Q  20 acttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||| ||||||||||||||||  ||||||||||||||| ||||||||||||    
T  16799441 acttaaacaacttagacaacatcaacaacttaagactcaaatactttggaa 16799491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 5760517 - 5760561
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||    
T  5760517 acaacttggacaacatcaacaacttaagactccaatactttggaa 5760561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 12576930 - 12576984
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagac 55  Q
    |||||||  ||||| ||||||||||||||||||||||| |  |||||||||||||    
T  12576930 aacaacaacttcaattacgacttcaacaacttagacaatatcaacaacttaagac 12576984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 22253324 - 22253280
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||  |||| |||||||||||||||||||||||    
T  22253324 acaacttggacaacatcaacatcttaagactccaatactttggaa 22253280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 28397511 - 28397555
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  | ||||||| ||||||||||||||||||    
T  28397511 acaacttagacaacatcatcaacttaggactccaatactttggaa 28397555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 32807203 - 32807251
Alignment:
Q  24 caacaacttagacaacaataacaacttaa-gactccaatactttggaaa 71  Q
    ||||||| ||||||||| |||||||||||  ||||||||||||||||||    
T  32807203 caacaacgtagacaacattaacaacttaatcactccaatactttggaaa 32807251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 3e-25; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 17378104 - 17378037
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17378104 aacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 17378037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18927709 - 18927779
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  18927709 aacaacagcttcaactacgacttcaacgacttagacaacattaacaacttaagactccaatactttggaaa 18927779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15174408 - 15174339
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  15174408 aacaacagcttcaactacgacttcaacaacttagacaacatcaacaacttaagactccaatactttggaa 15174339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28104209 - 28104139
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||    
T  28104209 aacaacagcttcaactacgacttcaaaaacttagacaacattaacaacttaagactcaaatactttggaaa 28104139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 18913757 - 18913824
Alignment:
Q  3 caacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||| ||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  18913757 caacagcttcaagtacgacttcaacaacttagacaacatcaacaacttaagactccaatactttggaa 18913824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 18937015 - 18937082
Alignment:
Q  3 caacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||| ||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  18937015 caacagcttcaagtacgacttcaacaacttagacaacatcaacaacttaagactccaatactttggaa 18937082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15875194 - 15875264
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||    
T  15875194 aacaacagcttcaactacgacttcaacaacttagataacattaacaacttaaaactccgatactttggaaa 15875264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 28708460 - 28708529
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||  |||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||    
T  28708460 aacaacaacttcaactacgacttcaacaacttatacaacatcaacaacttaaggctccaatactttggaa 28708529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15687972 - 15687912
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaat 61  Q
    |||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  15687972 aacaacaacttcaactacgacttcaacaacttagataacattaacaacttaagactccaat 15687912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 19953243 - 19953194
Alignment:
Q  11 tcaactacgacttcaacaacttagacaacaataacaacttaagactccaa 60  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  19953243 tcaactacgacttcaacaatttagacaacattaacaacttaagactccaa 19953194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 19773833 - 19773784
Alignment:
Q  21 cttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  19773833 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaa 19773784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 2201058 - 2201105
Alignment:
Q  24 caacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||    
T  2201058 caacaacgtaaacaacattaacaacttaagactccaatactttggaaa 2201105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 19399638 - 19399697
Alignment:
Q  10 ttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttgga 69  Q
    ||||||||||||||| |||| || ||||||| ||||||||||| | ||||||||||||||    
T  19399638 ttcaactacgacttctacaattttgacaacattaacaacttaaaattccaatactttgga 19399697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 22420906 - 22420953
Alignment:
Q  24 caacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||||| |||||| || ||||||||||||||||||||||||||||||    
T  22420906 caacaacgtagacatcattaacaacttaagactccaatactttggaaa 22420953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 17743215 - 17743257
Alignment:
Q  28 aacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  17743215 aacttagacaacatcaacaacttaagactccaatactttggaa 17743257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 22805758 - 22805800
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttgg 68  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  22805758 acaacttagacaacatcaacaacttaagactccaatactttgg 22805800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 19656297 - 19656253
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||    
T  19656297 acaacttggacaacatcaacaacttaagactccaatactttggaa 19656253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 20078330 - 20078286
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||    
T  20078330 acaacttagacaacatcaacaacttaagactccagtactttggaa 20078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 27573207 - 27573163
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||    
T  27573207 acaacttagacaacatcaacaacttaagactcaaatactttggaa 27573163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 18453143 - 18453184
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttg 67  Q
    ||||||| |||||||  |||||||||||||||||||||||||    
T  18453143 acaacttggacaacatcaacaacttaagactccaatactttg 18453184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 17743159 - 17743203
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||   |||||||||||||||||||||||||||    
T  17743159 acaacttggacaacatcgacaacttaagactccaatactttggaa 17743203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 27573153 - 27573109
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||   || |||||||||||||||||||||||||    
T  27573153 acaacttagacaacgtcaataacttaagactccaatactttggaa 27573109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 3644 - 3578
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3644 aacagtttcaactacaacttcaacaacttagacaacaataacaacttaagacttcaatactttggaa 3578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7743 - 7813
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  7743 aacaacagcttcaactacgacttcaacaacttagacaacattaacaactaaagactccaatactttggaaa 7813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27 - 93
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttg 67  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27 aacaacagcttcaactacgacttcaacaacttagacaacactaacaacttaagactccaatactttg 93  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 78214 - 78284
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  78214 aacaacatcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatactttggaaa 78284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19076320 - 19076390
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  19076320 aacaacagcttcaactacgacttcaacaacttaaacaacattaacaacttaagactccaatactttggaaa 19076390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17010824 - 17010893
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  17010824 aacaacagcttcaactacgacttcaacaacttagacaacatcaacaacttaagactccaatactttggaa 17010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 262958 - 263027
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  262958 aacaacagcttcaactacgaattcaacaacttagacaac-ttaacaacttaagactccaatactttggaaa 263027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29447814 - 29447884
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||| ||| |||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||    
T  29447814 aacatcagcttcaactacgactttaacaacttagacaacatcaacaacttaagactccaatactttggaaa 29447884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41861647 - 41861577
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  |||||||  |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  41861647 aacaacaccttcaactctgacttcaacaacttagacaacattaacaacttaagattccaatactttggaaa 41861577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 31252852 - 31252802
Alignment:
Q  10 ttcaactacgacttcaacaacttagacaacaataacaacttaagactccaa 60  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  31252852 ttcaactacgacttcaacaatttagacaacattaacaacttaagactccaa 31252802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 22107724 - 22107675
Alignment:
Q  21 cttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||    
T  22107724 cttcaaaaacttagacaacatcaacaacttaagactccaatactttggaa 22107675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 24212307 - 24212350
Alignment:
Q  24 caacaacttagacaacaataacaacttaagactccaatactttg 67  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||    
T  24212307 caacaacgtagacaacattaacaacttaagactccaatactttg 24212350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 35852562 - 35852605
Alignment:
Q  24 caacaacttagacaacaataacaacttaagactccaatactttg 67  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||    
T  35852562 caacaacgtagacaacattaacaacttaagactccaatactttg 35852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 23469766 - 23469808
Alignment:
Q  28 aacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||  |||||||||||||||||| |||||||||    
T  23469766 aacttagacaacatcaacaacttaagactccaacactttggaa 23469808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 33895929 - 33895886
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||    
T  33895929 acaacttggacaaca-tcacaacttaagactccaatactttggaa 33895886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9923182 - 9923252
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  9923182 aacaacagcttcaactacgacttcaacgacttagacaacattaacaacttaagactccaatactttggaaa 9923252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 14746890 - 14746823
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  14746890 aacagcttcaactacgactttaacaacttagacaacattaacaacttaagactccaatactttggaaa 14746823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26013292 - 26013362
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  26013292 aacaacagcttcaactccgacttcaacaacttagacaacattaacaacttaagaatccaatactttggaaa 26013362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11479677 - 11479612
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatacttt 66  Q
    |||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  11479677 aacaacagcttcaactacgacttcaacgacttagacaacattaacaacttaagactccaatacttt 11479612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40619636 - 40619705
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||| ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||    
T  40619636 aacaacagcttcaactacgacttcgacaacttagacaacatcaacaacttaagactccaatactttggaa 40619705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37838905 - 37838835
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  37838905 aacaacagcttcaactacgacttcaacaacttaaacaacattaacaacttaagactctaattctttggaaa 37838835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42597634 - 42597564
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  42597634 aacaacagcttcaactacgacttcaacaacttaaacaacattaacaacttaagactctaattctttggaaa 42597564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15497346 - 15497277
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||  |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  15497346 aacaacaacttcaactacgacttcaacaatttagacaacatcaacaacttaagactccaatactttggaa 15497277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 15884367 - 15884299
Alignment:
Q  2 acaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||||||||||||||||||||||||||  |||||||||||| ||||||| |||||||    
T  15884367 acaacagcttcaactacgacttcaacaacttagacaacatcaacaacttaagattccaataatttggaa 15884299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 17048424 - 17048375
Alignment:
Q  21 cttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  17048424 cttcaacaacttagacaacatcaacaacttaagactccaatactttggaa 17048375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 13592213 - 13592166
Alignment:
Q  23 tcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  13592213 tcaacaacttagacaacatcaacaacttaagactccaatactttggaa 13592166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 13592269 - 13592219
Alignment:
Q  20 acttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||| ||| ||||||||||||  ||||||||||||||||||||||||||||    
T  13592269 acttgaactacttagacaacatcaacaacttaagactccaatactttggaa 13592219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 53631541 - 53631497
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||    
T  53631541 acaacttggacaacatcaacaacttaagactccaatactttggaa 53631497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 10695177 - 10695131
Alignment:
Q  23 tcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||    
T  10695177 tcaacaacttagacaacatcaa-aacttaagactccaatactttggaa 10695131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 10908943 - 10908897
Alignment:
Q  23 tcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||    
T  10908943 tcaacaacttagacaacatcaa-aacttaagactccaatactttggaa 10908897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 15791739 - 15791776
Alignment:
Q  30 cttagacaacaataacaacttaagactccaatactttg 67  Q
    |||||||||||  |||||||||||||||||||||||||    
T  15791739 cttagacaacatcaacaacttaagactccaatactttg 15791776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 24047459 - 24047415
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| | |||||  ||||||||||||||||||||||||||||    
T  24047459 acaacttggtcaacatcaacaacttaagactccaatactttggaa 24047415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 24902 - 24835
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  24902 aacagcttcaactacgacttcaacaatttagacaacattaacaacttaagactccaatactttggaaa 24835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 21765 - 21832
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  21765 aacagcttcaactacgacttcaacaacttagataacattaacaacttaagactccaatactttggaaa 21832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5723 - 5653
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||| |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  5723 aacaacagcttcaactacgacttcaacgagttagacaacattaacaacttaagactccaatactttggaaa 5653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 70774 - 70704
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  70774 aacaacatcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaatacttttgaaa 70704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 67072 - 67142
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  67072 aacaacaacttcaactacgacttcaacaacttagacaaaattaacaacttaagactccaatactttggaaa 67142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 77798 - 77868
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  77798 aacaacaacttcaactacgacttcaacaacttagacaacattaacaacttacgactccaatactttggaaa 77868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 126841 - 126908
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| |||||||||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||    
T  126841 aacagcttcaactacgacttcaacattttagacaacattaacaacttaagattccaatactttggaaa 126908  T

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Target: scaffold0877 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3033 - 2964
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  3033 aacaacaacttcaactacgacttcaacaacttagacaacattaacaacttaagaatccaatactttggaa 2964  T

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Target: scaffold0462 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10320 - 10389
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||  |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  10320 aacaacaacttcaactacgacttcaacaacttagacaacatcaacaacttaagactccaatactttggaa 10389  T

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Target: scaffold0125 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2194 - 2125
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  2194 aacaacagtttcaactaccacttcaacaacatagacaacattaacaacttaagacttcaatactttggaa 2125  T

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Target: scaffold0741 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 7059 - 6992
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  7059 aacagcttcaactacgacttcaacaacttagacaacattaacaaattaagactccaatacattggaaa 6992  T

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Target: scaffold0317 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 7209 - 7142
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||    
T  7209 aacagcttcaactacgacttcaacaacttagacaacattaacaacttaagactccaattcttttgaaa 7142  T

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Target: scaffold0515 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4130 - 4200
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  ||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||    
T  4130 aacaacaacttcaactacgacttcaaaaatttagacaacattaacaacttaagactccaatactttggaaa 4200  T

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Target: scaffold0436 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7967 - 8037
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  7967 aacaacaacttcaactacgacttcaacaacttagacaacatcaacaacttaagactccaacactttggaaa 8037  T

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Target: scaffold0306 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4130 - 4200
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  ||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||    
T  4130 aacaacaacttcaactacgacttcaaaaatttagacaacattaacaacttaagactccaatactttggaaa 4200  T

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Target: scaffold0020 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 170059 - 169989
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||  ||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  170059 aacaacaacttcaactacgacttcaacaacttagacaaaattaagaacttaagactccaatactttggaaa 169989  T

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Target: scaffold0004 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 362717 - 362778
Alignment:
Q  10 ttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  362717 ttcaactacgacttcaacaatttagacaacattaacaacttaagattccaatactttggaaa 362778  T

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Target: scaffold0679 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2743 - 2674
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||  |||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||    
T  2743 aacaacaacttcaactacgacttcaacaacttatacaacatcaacaacttaaggctccaatactttggaa 2674  T

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Target: scaffold0356 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 749 - 696
Alignment:
Q  1 aacaacagtttcaactacgacttcaacaacttagacaacaataacaacttaaga 54  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  749 aacaacagcttcaactacgacttcaacaacttagacaacattaacaacttaaga 696  T

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Target: scaffold0335 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 699 - 760
Alignment:
Q  10 ttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||    
T  699 ttcaactacgactttaacattttagacaacattaacaacttaagactccaatactttggaaa 760  T

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Target: scaffold0561 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 10412 - 10479
Alignment:
Q  4 aacagtttcaactacgacttcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||||||||| ||||||| ||  |||||||||| ||||||||||||| ||||||||||||||||    
T  10412 aacagtttcaactaagacttcatcattttagacaacattaacaacttaagattccaatactttggaaa 10479  T

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Target: scaffold0037 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 69152 - 69202
Alignment:
Q  10 ttcaactacgacttcaacaacttagacaacaataacaacttaagactccaa 60  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  69152 ttcaactacgacttcaacaatttagacaacattaacaacttaagactccaa 69202  T

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Target: scaffold0599 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 1577 - 1532
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  1577 acaacttagacaacattaacaacttaagactccaatactttggaaa 1532  T

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Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 608 - 652
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  608 acaacttggacaacaataacaacttaagactccaatactttggaa 652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 85367 - 85415
Alignment:
Q  23 tcaacaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  85367 tcaacaacttagacaacattaacaacttaatactccaatactttggaaa 85415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 15565 - 15611
Alignment:
Q  24 caacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||| || |||||||||||||||||||||||||||||    
T  15565 caacaacttagacatcattaacaacttaagactccaatactttggaa 15611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 419 - 460
Alignment:
Q  10 ttcaactacgacttcaacaacttagacaacaataacaactta 51  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  419 ttcaactacgacttcaacaacttagacaacattaacaactta 460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 673 - 722
Alignment:
Q  21 cttcaacaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  673 cttcaacaactaagacaacatcaacaacttaagactccaatactttggaa 722  T

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Target: scaffold0165 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 3524 - 3569
Alignment:
Q  21 cttcaacaacttagacaacaataacaacttaagactccaatacttt 66  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  3524 cttcaacaacttagacaacatcaacaacttaagactccaatacttt 3569  T

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Target: scaffold0165; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 7588 - 7633
Alignment:
Q  21 cttcaacaacttagacaacaataacaacttaagactccaatacttt 66  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  7588 cttcaacaacttagacaacatcaacaacttaagactccaatacttt 7633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 21017 - 21061
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  21017 acaacttagacaacatcaacaacttaagactccaatactttggaa 21061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 20963 - 21007
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||   |||||||||||||||||||||||||||    
T  20963 acaacttggacaacatcgacaacttaagactccaatactttggaa 21007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 38311 - 38267
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  38311 acaacttagacaacatcaacaacttaagactccaatactttggaa 38267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 125781 - 125825
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  125781 acaacttagacaacatcaacaacttaagactccaatactttggaa 125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 365 - 407
Alignment:
Q  28 aacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  365 aacttagacaacattaacaacttaagactccaatagtttggaa 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 36141 - 36186
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaaa 71  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||    
T  36141 acaacttggacaacatcaacaacttaagactccaatactttggaaa 36186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 1535 - 1491
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||    
T  1535 acaacttggacaacatcaacaacttaagactccaatactttggaa 1491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 13671 - 13627
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  |||||||| |||||||||||||||||||    
T  13671 acaacttagacaacatcaacaactttagactccaatactttggaa 13627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 8851 - 8895
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||    
T  8851 acaacttagacaacatcaacaacttatgactccaatactttggaa 8895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 117192 - 117236
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||    
T  117192 acaacatagacaacatcaacaacttaagactccaatactttggaa 117236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 117138 - 117182
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||   |||||||||||||||||||||||||||    
T  117138 acaacttggacaacatcgacaacttaagactccaatactttggaa 117182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 119842 - 119878
Alignment:
Q  34 gacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||  ||||||||||||||||||||||||||||    
T  119842 gacaacatcaacaacttaagactccaatactttggaa 119878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 1855 - 1897
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttgg 68  Q
    ||||||| |||||||  ||||||||||||||||||||||||||    
T  1855 acaacttggacaacatcaacaacttaagactccaatactttgg 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 18327 - 18285
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttgg 68  Q
    ||||||| |||||||  ||||||||||||||||||||||||||    
T  18327 acaacttggacaacatcaacaacttaagactccaatactttgg 18285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 7511 - 7555
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||  |||||||||||| |||||||||||||||    
T  7511 acaacttggacaacatcaacaacttaagaatccaatactttggaa 7555  T

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Target: scaffold0359 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 15416 - 15460
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||  |||||||||||| |||||||||||||||    
T  15416 acaacttggacaacatcaacaacttaagaatccaatactttggaa 15460  T

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Target: scaffold0278 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 7615 - 7659
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    ||||||| |||||||   |||||||||||||||||||||||||||    
T  7615 acaacttggacaacatcgacaacttaagactccaatactttggaa 7659  T

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Target: scaffold0074 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 8130 - 8166
Alignment:
Q  34 gacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||  ||||||||||||||||||||||||||||    
T  8130 gacaacatcaacaacttaagactccaatactttggaa 8166  T

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Target: scaffold0046 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 17076 - 17032
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatactttggaa 70  Q
    |||||||||||||||  | ||||||| ||||||||||||||||||    
T  17076 acaacttagacaacatcatcaacttaggactccaatactttggaa 17032  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 497387 - 497427
Alignment:
Q  26 acaacttagacaacaataacaacttaagactccaatacttt 66  Q
    |||||||||||||||  |||||||||||||| |||||||||    
T  497387 acaacttagacaacatcaacaacttaagacttcaatacttt 497427  T

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