View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0426_low_10 (Length: 310)

Name: NF0426_low_10
Description: NF0426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0426_low_10
NF0426_low_10
[»] chr5 (19 HSPs)
chr5 (89-235)||(18407897-18408044)
chr5 (89-191)||(23111197-23111300)
chr5 (81-196)||(19512334-19512449)
chr5 (81-196)||(28370047-28370161)
chr5 (84-188)||(34830035-34830138)
chr5 (174-240)||(22006836-22006902)
chr5 (81-188)||(22751090-22751196)
chr5 (81-188)||(38144537-38144643)
chr5 (89-188)||(22438748-22438847)
chr5 (81-188)||(23528580-23528685)
chr5 (101-188)||(19236869-19236954)
chr5 (134-196)||(22337524-22337586)
chr5 (132-188)||(20781742-20781798)
chr5 (136-188)||(22461158-22461210)
chr5 (136-188)||(22467782-22467834)
chr5 (134-196)||(22341062-22341124)
chr5 (158-196)||(37804067-37804105)
chr5 (134-188)||(42961567-42961621)
chr5 (132-188)||(20772967-20773023)
[»] scaffold0222 (1 HSPs)
scaffold0222 (89-235)||(16775-16922)
[»] scaffold0317 (1 HSPs)
scaffold0317 (84-240)||(1337-1493)
[»] chr7 (30 HSPs)
chr7 (84-240)||(13679444-13679600)
chr7 (89-240)||(11382818-11382970)
chr7 (89-235)||(11389300-11389447)
chr7 (153-240)||(13664872-13664959)
chr7 (90-188)||(14319630-14319728)
chr7 (81-196)||(15168124-15168238)
chr7 (90-188)||(14230737-14230835)
chr7 (81-193)||(16677242-16677355)
chr7 (81-193)||(17651478-17651591)
chr7 (81-188)||(14422932-14423039)
chr7 (105-193)||(16009548-16009636)
chr7 (81-188)||(18873309-18873415)
chr7 (173-240)||(19617403-19617470)
chr7 (90-188)||(31155349-31155448)
chr7 (81-193)||(10895786-10895898)
chr7 (173-240)||(4281158-4281225)
chr7 (81-188)||(12590644-12590749)
chr7 (81-188)||(13007381-13007486)
chr7 (89-188)||(20311052-20311151)
chr7 (81-188)||(12709844-12709949)
chr7 (81-188)||(13122915-13123020)
chr7 (81-188)||(13743658-13743763)
chr7 (81-188)||(20906462-20906567)
chr7 (134-188)||(21230960-21231014)
chr7 (134-196)||(46625963-46626025)
chr7 (101-188)||(2971223-2971308)
chr7 (158-196)||(11304207-11304245)
chr7 (132-196)||(11311057-11311121)
chr7 (132-188)||(29181110-29181166)
chr7 (132-188)||(16091073-16091129)
[»] chr2 (21 HSPs)
chr2 (89-240)||(23265097-23265250)
chr2 (89-240)||(23280165-23280318)
chr2 (89-240)||(21908315-21908466)
chr2 (90-188)||(27207720-27207818)
chr2 (81-191)||(6483666-6483775)
chr2 (81-191)||(6487133-6487242)
chr2 (81-196)||(19661446-19661560)
chr2 (90-188)||(26885139-26885236)
chr2 (173-240)||(6743248-6743315)
chr2 (173-240)||(43694508-43694575)
chr2 (101-188)||(10546-10631)
chr2 (173-240)||(201729-201796)
chr2 (84-188)||(23168299-23168406)
chr2 (84-188)||(23579556-23579663)
chr2 (81-188)||(5706024-5706130)
chr2 (101-188)||(25180930-25181015)
chr2 (81-188)||(26583776-26583881)
chr2 (81-193)||(23101458-23101570)
chr2 (134-191)||(24661578-24661635)
chr2 (124-186)||(23878998-23879060)
chr2 (134-191)||(9242962-9243019)
[»] chr1 (16 HSPs)
chr1 (89-235)||(18712754-18712901)
chr1 (134-240)||(19663465-19663571)
chr1 (134-240)||(11158094-11158200)
chr1 (89-196)||(32651527-32651635)
chr1 (81-191)||(20437021-20437131)
chr1 (173-240)||(21543164-21543231)
chr1 (173-235)||(42094897-42094959)
chr1 (134-191)||(20805322-20805379)
chr1 (101-188)||(20851133-20851218)
chr1 (101-188)||(20857760-20857845)
chr1 (101-188)||(21706245-21706330)
chr1 (101-188)||(21710787-21710872)
chr1 (121-188)||(41112023-41112089)
chr1 (134-196)||(16372955-16373017)
chr1 (161-195)||(25091411-25091445)
chr1 (136-188)||(20044952-20045004)
[»] scaffold0146 (1 HSPs)
scaffold0146 (89-240)||(13587-13739)
[»] chr3 (29 HSPs)
chr3 (89-240)||(17240461-17240613)
chr3 (89-240)||(18929201-18929352)
chr3 (81-196)||(9534276-9534390)
chr3 (81-188)||(13323788-13323895)
chr3 (81-193)||(20247784-20247895)
chr3 (81-196)||(14762750-14762864)
chr3 (81-188)||(13302241-13302347)
chr3 (89-188)||(51301545-51301643)
chr3 (81-186)||(24192904-24193009)
chr3 (81-193)||(38310795-38310906)
chr3 (81-188)||(13312897-13313003)
chr3 (173-240)||(14085639-14085706)
chr3 (173-240)||(14091040-14091107)
chr3 (81-188)||(24933829-24933934)
chr3 (173-240)||(49400639-49400706)
chr3 (100-188)||(16801468-16801555)
chr3 (81-188)||(23370506-23370613)
chr3 (173-240)||(8579193-8579260)
chr3 (81-188)||(10389444-10389550)
chr3 (81-188)||(10414533-10414639)
chr3 (81-188)||(10421203-10421309)
chr3 (101-188)||(12033445-12033530)
chr3 (101-188)||(17131701-17131786)
chr3 (121-188)||(41455098-41455164)
chr3 (158-195)||(3803833-3803870)
chr3 (132-188)||(14865844-14865900)
chr3 (158-193)||(12306082-12306117)
chr3 (134-193)||(16801029-16801088)
chr3 (157-191)||(5842895-5842929)
[»] chr8 (14 HSPs)
chr8 (88-196)||(18614227-18614335)
chr8 (81-196)||(29643378-29643493)
chr8 (89-191)||(23482050-23482153)
chr8 (81-188)||(44477571-44477677)
chr8 (81-188)||(44492729-44492835)
chr8 (173-240)||(23826248-23826315)
chr8 (81-193)||(8727728-8727840)
chr8 (89-195)||(19750504-19750612)
chr8 (81-188)||(23866564-23866669)
chr8 (101-188)||(24320671-24320756)
chr8 (81-187)||(17054540-17054644)
chr8 (134-196)||(39364921-39364983)
chr8 (134-195)||(21931698-21931759)
chr8 (81-188)||(27940852-27940961)
[»] scaffold0020 (1 HSPs)
scaffold0020 (104-240)||(101875-102012)
[»] chr6 (31 HSPs)
chr6 (89-240)||(9187449-9187602)
chr6 (90-188)||(31252379-31252477)
chr6 (81-193)||(4477805-4477917)
chr6 (81-188)||(10986181-10986288)
chr6 (81-196)||(23057887-23058001)
chr6 (81-191)||(23839146-23839256)
chr6 (90-188)||(15458444-15458544)
chr6 (90-188)||(15465039-15465139)
chr6 (80-188)||(930096-930203)
chr6 (81-184)||(18800385-18800488)
chr6 (81-188)||(34639987-34640093)
chr6 (105-188)||(11288669-11288753)
chr6 (81-188)||(12168312-12168417)
chr6 (81-188)||(19287221-19287326)
chr6 (81-188)||(19785870-19785975)
chr6 (81-188)||(19878405-19878510)
chr6 (81-188)||(29614147-29614254)
chr6 (121-188)||(34646661-34646728)
chr6 (134-196)||(25397174-25397236)
chr6 (81-188)||(19884181-19884286)
chr6 (134-193)||(25598645-25598704)
chr6 (134-196)||(25348488-25348550)
chr6 (82-188)||(25469705-25469808)
chr6 (158-196)||(12943149-12943187)
chr6 (134-188)||(24512844-24512898)
chr6 (134-191)||(19471332-19471389)
chr6 (162-195)||(21477299-21477332)
chr6 (134-193)||(2286762-2286821)
chr6 (157-191)||(28709588-28709622)
chr6 (139-187)||(9184999-9185048)
chr6 (162-195)||(21470799-21470832)
[»] scaffold0609 (1 HSPs)
scaffold0609 (90-188)||(5858-5956)
[»] chr4 (13 HSPs)
chr4 (96-193)||(14486623-14486720)
chr4 (84-188)||(27906216-27906320)
chr4 (174-240)||(16157830-16157896)
chr4 (89-193)||(8834851-8834956)
chr4 (81-188)||(53483653-53483759)
chr4 (134-188)||(15408140-15408194)
chr4 (134-191)||(13888643-13888700)
chr4 (134-191)||(15245217-15245274)
chr4 (128-188)||(11848108-11848168)
chr4 (86-188)||(8045833-8045933)
chr4 (134-191)||(15308122-15308179)
chr4 (134-191)||(18213769-18213826)
chr4 (132-188)||(16146831-16146887)
[»] scaffold0124 (1 HSPs)
scaffold0124 (134-240)||(34224-34330)
[»] scaffold0004 (1 HSPs)
scaffold0004 (89-196)||(116851-116959)
[»] scaffold0461 (1 HSPs)
scaffold0461 (89-195)||(1-108)
[»] scaffold0154 (1 HSPs)
scaffold0154 (81-188)||(30805-30912)
[»] scaffold0453 (1 HSPs)
scaffold0453 (90-188)||(10551-10649)
[»] scaffold0261 (1 HSPs)
scaffold0261 (84-188)||(23570-23674)
[»] scaffold0720 (1 HSPs)
scaffold0720 (90-188)||(3403-3501)
[»] scaffold0034 (1 HSPs)
scaffold0034 (84-186)||(73235-73337)
[»] scaffold0026 (2 HSPs)
scaffold0026 (81-188)||(11851-11957)
scaffold0026 (81-188)||(111634-111740)
[»] scaffold0001 (1 HSPs)
scaffold0001 (90-188)||(493029-493126)
[»] scaffold0249 (1 HSPs)
scaffold0249 (90-188)||(13895-13994)
[»] scaffold0247 (1 HSPs)
scaffold0247 (81-188)||(11289-11396)
[»] scaffold0127 (1 HSPs)
scaffold0127 (89-188)||(10195-10293)
[»] scaffold0023 (1 HSPs)
scaffold0023 (81-188)||(135386-135492)
[»] scaffold0025 (1 HSPs)
scaffold0025 (81-186)||(14398-14503)
[»] scaffold0924 (1 HSPs)
scaffold0924 (83-188)||(751-856)
[»] scaffold0029 (3 HSPs)
scaffold0029 (81-188)||(111830-111937)
scaffold0029 (132-188)||(91203-91259)
scaffold0029 (132-188)||(96929-96985)
[»] scaffold1461 (1 HSPs)
scaffold1461 (81-196)||(1477-1591)
[»] scaffold1318 (1 HSPs)
scaffold1318 (81-188)||(1913-2019)
[»] scaffold0106 (1 HSPs)
scaffold0106 (173-240)||(39509-39576)
[»] scaffold0076 (2 HSPs)
scaffold0076 (173-240)||(29147-29214)
scaffold0076 (173-240)||(34548-34615)
[»] scaffold0028 (4 HSPs)
scaffold0028 (173-240)||(45981-46048)
scaffold0028 (173-240)||(51385-51452)
scaffold0028 (89-196)||(69701-69809)
scaffold0028 (89-191)||(2014-2118)
[»] scaffold0011 (1 HSPs)
scaffold0011 (173-240)||(173563-173630)
[»] scaffold2054 (1 HSPs)
scaffold2054 (105-188)||(685-769)
[»] scaffold0553 (1 HSPs)
scaffold0553 (81-188)||(10196-10303)
[»] scaffold0544 (1 HSPs)
scaffold0544 (81-188)||(1526-1633)
[»] scaffold0335 (1 HSPs)
scaffold0335 (89-191)||(2625-2729)
[»] scaffold0348 (1 HSPs)
scaffold0348 (81-188)||(9284-9390)
[»] scaffold0129 (1 HSPs)
scaffold0129 (81-188)||(45275-45381)
[»] scaffold0139 (1 HSPs)
scaffold0139 (134-191)||(14994-15051)
[»] scaffold0138 (1 HSPs)
scaffold0138 (134-191)||(12298-12355)
[»] scaffold0456 (2 HSPs)
scaffold0456 (124-188)||(922-986)
scaffold0456 (124-188)||(8067-8131)
[»] scaffold0090 (1 HSPs)
scaffold0090 (124-188)||(18160-18224)
[»] scaffold0796 (2 HSPs)
scaffold0796 (81-188)||(1733-1838)
scaffold0796 (81-188)||(5756-5861)
[»] scaffold0058 (1 HSPs)
scaffold0058 (81-188)||(240-345)
[»] scaffold0107 (1 HSPs)
scaffold0107 (134-188)||(40532-40586)
[»] scaffold0019 (1 HSPs)
scaffold0019 (134-188)||(135474-135528)
[»] scaffold1773 (1 HSPs)
scaffold1773 (83-188)||(1129-1232)
[»] scaffold0006 (1 HSPs)
scaffold0006 (83-188)||(50130-50233)
[»] scaffold0483 (1 HSPs)
scaffold0483 (81-196)||(11013-11128)
[»] scaffold0235 (1 HSPs)
scaffold0235 (135-187)||(22594-22646)
[»] scaffold0117 (2 HSPs)
scaffold0117 (81-188)||(1898-2005)
scaffold0117 (81-188)||(8575-8682)
[»] scaffold0096 (1 HSPs)
scaffold0096 (112-187)||(39508-39584)
[»] scaffold0094 (1 HSPs)
scaffold0094 (89-191)||(52203-52307)
[»] scaffold0031 (2 HSPs)
scaffold0031 (89-195)||(121858-121965)
scaffold0031 (89-195)||(132734-132841)
[»] scaffold0815 (1 HSPs)
scaffold0815 (137-191)||(1453-1507)
[»] scaffold0310 (1 HSPs)
scaffold0310 (134-188)||(17644-17698)
[»] scaffold0012 (1 HSPs)
scaffold0012 (134-191)||(222202-222259)
[»] scaffold0169 (1 HSPs)
scaffold0169 (89-195)||(6931-7038)
[»] scaffold0053 (1 HSPs)
scaffold0053 (132-188)||(79491-79547)
[»] scaffold0679 (1 HSPs)
scaffold0679 (157-191)||(1581-1615)
[»] scaffold0600 (1 HSPs)
scaffold0600 (134-191)||(734-791)
[»] scaffold0480 (1 HSPs)
scaffold0480 (158-191)||(1490-1523)
[»] scaffold0337 (1 HSPs)
scaffold0337 (134-191)||(8767-8824)
[»] scaffold0072 (1 HSPs)
scaffold0072 (132-188)||(49971-50027)


Alignment Details
Target: chr5 (Bit Score: 112; Significance: 1e-56; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 18408044 - 18407897
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||| ||||||| || |||||||||||||||||||| | |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  18408044 aaccctaattcccaatttttattttcaagaacaattcaattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctt 18407945  T
Q  188 aattcagaaaatcgcacaacacacggatgatcttggctctacttgttc 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18407944 aattcagaaaatcgcacaacacacggatgatcttggctctacttgttc 18407897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 89 - 191
Target Start/End: Complemental strand, 23111300 - 23111197
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||| ||||||| || |||||||||||||||||||| | |||||||||||||||||||  ||||| ||||| |||||||||||||||||||||    
T  23111300 aaccctaattcccaatttttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctt 23111201  T
Q  188 aatt 191  Q
    ||||    
T  23111200 aatt 23111197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 196
Target Start/End: Original strand, 19512334 - 19512449
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  |||||||| |||||| || ||| || ||||||||| ||||||||||||||||| || ||||| ||||| |||||||||||||    
T  19512334 catcatcaaaccctaaccctcaattt-atcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacc 19512432  T
Q  180 cttaccttaattcagaa 196  Q
    |||||||||||||||||    
T  19512433 cttaccttaattcagaa 19512449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 196
Target Start/End: Complemental strand, 28370161 - 28370047
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  28370161 catcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 28370063  T
Q  181 ttaccttaattcagaa 196  Q
    ||||||||||||||||    
T  28370062 ttaccttaattcagaa 28370047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 34830035 - 34830138
Alignment:
Q  84 catcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccctta 183  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||| || |||||||||||||||| || |  || ||||||||||| || ||||||||    
T  34830035 catcataccctaattctcaattttatcttcaagaactattctattagattgattttcagaaattatacatta-aattattgaaagataatcccaccctta 34830133  T
Q  184 cctta 188  Q
    |||||    
T  34830134 cctta 34830138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 22006902 - 22006836
Alignment:
Q  174 ctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| ||||    
T  22006902 ctcacccttaccttaattcagaaaatcgcacgacacacgtttgatcttggctctacttgttcttctc 22006836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 22751090 - 22751196
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| |||||| | ||| || ||||||||| ||||||||||||||||| || ||||| || || ||| ||||||||||    
T  22751090 catcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcaccc 22751188  T
Q  181 ttacctta 188  Q
    ||||||||    
T  22751189 ttacctta 22751196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 38144643 - 38144537
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||  || ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  38144643 catcatcaaaccctaaccctcaattt-attttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 38144545  T
Q  181 ttacctta 188  Q
    ||||||||    
T  38144544 ttacctta 38144537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 22438847 - 22438748
Alignment:
Q  89 aaccctaattctcaattttatcttcaagaacaattcaa-ttaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||| ||||||||||  |||||||||||||  ||| |  ||||||||||||||||| || ||||| ||||| |||||||||||||||||||||    
T  22438847 aaccctaattcccaattttatcc-caagaacaattcatgttaagacaattttcagaaattatacattatgattattgagagatagtctcacccttacctt 22438749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 23528580 - 23528685
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||| | ||| | |||| ||| | ||| |||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||    
T  23528580 catcatcaaaccctaactttca-tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccc 23528677  T
Q  181 ttacctta 188  Q
    ||||||||    
T  23528678 ttacctta 23528685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 19236869 - 19236954
Alignment:
Q  101 caattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||| ||| ||||||| ||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||||||||||    
T  19236869 caattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 19236954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 22337524 - 22337586
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcagaa 196  Q
    ||||||||||||  |||||| || ||||||||| | |||||||||||||||||||||| ||||    
T  22337524 aattttcagaaaccatatattataatcattgaaggttagtctcacccttaccttaatttagaa 22337586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 20781742 - 20781798
Alignment:
Q  132 ttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||||||| |||||| || || ||||||||||| || |||||||||||||    
T  20781742 ttaattttcagaaatcatatattataattattgaaagataatcccacccttacctta 20781798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 22461158 - 22461210
Alignment:
Q  136 ttttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||| ||||  ||||||||||| || |||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttacctta 22461210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 22467782 - 22467834
Alignment:
Q  136 ttttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||| ||||  ||||||||||| || |||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttacctta 22467834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 22341062 - 22341124
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcagaa 196  Q
    ||||||||||||  |||||| || ||||||||| | ||| |||||||||||||||||| ||||    
T  22341062 aattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttaatttagaa 22341124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 37804105 - 37804067
Alignment:
Q  158 atcattgaaagatagtctcacccttaccttaattcagaa 196  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  37804105 atcattgagagatagtctcgcccttaccttaattcagaa 37804067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 42961567 - 42961621
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||||| |||||| || ||||||||| | ||| |||||||||||||||    
T  42961567 aattttcagaaatcatatattataatcattgaaggttagcctcacccttacctta 42961621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 20772967 - 20773023
Alignment:
Q  132 ttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||||||| |||||| || |  ||||||||||| || |||||||||||||    
T  20772967 ttaattttcagaaatcatatattataactattgaaagataatcccacccttacctta 20773023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 16775 - 16922
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||| ||||||| || |||||||||||||||||||| | |||||||||||||||||||  ||||| ||||| |||||||||||||||||||||    
T  16775 aaccctaattcccaatttttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctt 16874  T
Q  188 aattcagaaaatcgcacaacacacggatgatcttggctctacttgttc 235  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16875 aattcagaaaatcgcacgacacacggatgatcttggctctacttgttc 16922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 84 - 240
Target Start/End: Original strand, 1337 - 1493
Alignment:
Q  84 catcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccctta 183  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1337 catcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcaccctta 1436  T
Q  184 ccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    ||||| ||||||||| | |||  ||  ||||||||||||||||||||||||| ||||    
T  1437 ccttatttcagaaaaacacacggcaatcggatgatcttggctctacttgttcttctc 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 5e-50; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 84 - 240
Target Start/End: Original strand, 13679444 - 13679600
Alignment:
Q  84 catcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccctta 183  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13679444 catcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcaccctta 13679543  T
Q  184 ccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    ||||| ||||||||| | |||  ||  ||||||||||||||||||||||||| ||||    
T  13679544 ccttatttcagaaaaacacacggcaatcggatgatcttggctctacttgttcttctc 13679600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 89 - 240
Target Start/End: Complemental strand, 11382970 - 11382818
Alignment:
Q  89 aaccctaattctcaattttatcttcaagaacaattca-attaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||| |||||| |||  ||||||||||||| |||| |  |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  11382970 aaccctaattcccaatttcatcc-caagaacaattcatattaagacaattttcagaaattatatattatgattattgagagatagtctcacccttacctt 11382872  T
Q  188 aattcagaaaatcgcacaacacacggatga-tcttggctctacttgttcatctc 240  Q
    ||||||| ||||||||| ||||||| | || |||||||||||||||||| ||||    
T  11382871 aattcaggaaatcgcacgacacacgaaggattcttggctctacttgttcttctc 11382818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 11389447 - 11389300
Alignment:
Q  89 aaccctaattctcaattttatcttcaagaacaattca-attaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||| |||||| |||  ||||||||||||  |||| |  |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  11389447 aaccctaattcccaatttcatcc-caagaacaattcgtattaagacaattttcagaaattatatattatgattattgagagatagtctcacccttacctt 11389349  T
Q  188 aattcagaaaatcgcacaacacacggatga-tcttggctctacttgttc 235  Q
    ||||||| ||||||||| ||||||| | || ||||||||||||||||||    
T  11389348 aattcaggaaatcgcacgacacacgaaggattcttggctctacttgttc 11389300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 13664872 - 13664959
Alignment:
Q  153 tcatgatcattgaaagatagtctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||  | ||||||||||||||||||||||| ||||    
T  13664872 tcatgatcattgaaagatagtctcacccttaccttaattcagaaaaacgcacggcaatcagatgatcttggctctacttgttcttctc 13664959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 14319728 - 14319630
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||||||||||||||| ||||  |||| ||||||||||||||||||| || |  |||||||||||||| || |||||||||||||    
T  14319728 accctaattctcaattttatcttcaagaactattcttttagattaattttcagaaattatacattaaaatcattgaaagataatcccacccttacctta 14319630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 196
Target Start/End: Original strand, 15168124 - 15168238
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| |||||| | ||| || ||||||||| ||||||||||||||||| || ||||| || || ||||||||||||||    
T  15168124 catcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcaccc 15168222  T
Q  181 ttaccttaattcagaa 196  Q
    ||||||||||| ||||    
T  15168223 ttaccttaatttagaa 15168238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 14230737 - 14230835
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||||||||||||||| ||||  |||| ||||||||||||||||||| || |   ||||||||||||| || |||||||||||||    
T  14230737 accctaattctcaattttatcttcaagaactattcttttagattaattttcagaaattatacattaaattcattgaaagataatcccacccttacctta 14230835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 81 - 193
Target Start/End: Original strand, 16677242 - 16677355
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  || |||||||||||| || ||| || ||||||||| |||||| |||||||||| || ||||| ||||| |||||||||||||    
T  16677242 catcatcaaaccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacc 16677341  T
Q  180 cttaccttaattca 193  Q
    ||||||| ||||||    
T  16677342 cttacctgaattca 16677355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 81 - 193
Target Start/End: Original strand, 17651478 - 17651591
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  || |||||||||||| || ||| || ||||||||| |||||| |||||||||| || ||||| ||||| |||||||||||||    
T  17651478 catcatcaaaccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacc 17651577  T
Q  180 cttaccttaattca 193  Q
    ||||||| ||||||    
T  17651578 cttacctgaattca 17651591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 14422932 - 14423039
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  |||||||| |||||| || ||| || ||||||||| ||||||||||||||||| || ||||| ||||| |||||||||||||    
T  14422932 catcatcaaaccctaaccctcaattt-atcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacc 14423030  T
Q  180 cttacctta 188  Q
    |||||||||    
T  14423031 cttacctta 14423039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 16009548 - 16009636
Alignment:
Q  105 tttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattca 193  Q
    ||||||||| | ||| || ||||||||| ||||||||||||||||| || ||||| ||||| |||||||||||||||||||||||||||    
T  16009548 tttatcttccaaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaattca 16009636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 18873309 - 18873415
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| |||||| | ||| || ||||||||| ||||||||||||||||| || ||||| || || ||| ||||||||||    
T  18873309 catcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcaccc 18873407  T
Q  181 ttacctta 188  Q
    ||||||||    
T  18873408 ttacctta 18873415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 19617403 - 19617470
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  19617403 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 19617470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 31155349 - 31155448
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaatttt-cagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||||||||||||  | || ||| |||||| ||| |||||||| |||||||||||||| || |||||||||||||| || |||||||||||||    
T  31155349 accctaattctcaattttattcttaaaaactattcaactagattaatttttcagaaattatatattataatcattgaaagataatcccacccttacctta 31155448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 10895898 - 10895786
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  | |||||| |||||| || ||| || ||||||||| |||||||| |||||||| || ||||| ||||| |||||||||||||    
T  10895898 catcatcaaaccctaacccacaattt-atcttccaaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacc 10895800  T
Q  180 cttaccttaattca 193  Q
    ||||| ||||||||    
T  10895799 cttacgttaattca 10895786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 4281158 - 4281225
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| | |||||| ||||||||| ||||||||||| ||||    
T  4281158 tctcacccttaccttagttcagaaaatcgcacgatacacggttgatcttggttctacttgttcttctc 4281225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 12590749 - 12590644
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||| | ||| | |||| ||| | ||| |||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||    
T  12590749 catcatcaaaccctaactttca-tattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccc 12590652  T
Q  181 ttacctta 188  Q
    ||||||||    
T  12590651 ttacctta 12590644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 13007381 - 13007486
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||| | ||| | |||| ||| | ||| |||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||    
T  13007381 catcatcaaaccctaactttca-tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccc 13007478  T
Q  181 ttacctta 188  Q
    ||||||||    
T  13007479 ttacctta 13007486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 20311151 - 20311052
Alignment:
Q  89 aaccctaattctcaattttatcttcaagaacaattcaa-ttaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||| ||||||||||  |||||||||||||  ||| |  |||||||||||||||||  | ||||| ||||| |||||||||||||||||||||    
T  20311151 aaccctaattcccaattttatcc-caagaacaattcatgttacgacaattttcagaaattatacgttatgattattgagagatagtctcacccttacctt 20311053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 12709949 - 12709844
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||| ||| ||||||| || ||||| ||||| ||||||||||||||    
T  12709949 catcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattt-caggaattataaattatgattattgagagatagtctcaccc 12709852  T
Q  181 ttacctta 188  Q
    ||||||||    
T  12709851 ttacctta 12709844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 13123020 - 13122915
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||| ||| ||||||| || ||||| ||||| ||||||||||||||    
T  13123020 catcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattt-caggaattataaattatgattattgagagatagtctcaccc 13122923  T
Q  181 ttacctta 188  Q
    ||||||||    
T  13122922 ttacctta 13122915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 13743658 - 13743763
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||| ||| ||||||| || ||||| ||||| ||||||||||||||    
T  13743658 catcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattt-caggaattataaattatgattattgagagatagtctcaccc 13743755  T
Q  181 ttacctta 188  Q
    ||||||||    
T  13743756 ttacctta 13743763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 20906567 - 20906462
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||| || || |||||| |||||||| ||| ||||| | ||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||    
T  20906567 catcattaacccttaattcccaattttacctt-aagaatagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccaccc 20906470  T
Q  181 ttacctta 188  Q
    ||||||||    
T  20906469 ttacctta 20906462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 21231014 - 21230960
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  21231014 aattttcagaaattatatactatgattattgagagatagtctcacccttacctta 21230960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 46625963 - 46626025
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcagaa 196  Q
    ||||||| |||||||||||| || |||||||| || |||||||||||||| ||||||||||||    
T  46625963 aattttccgaaattatatattataatcattgagagttagtctcacccttatcttaattcagaa 46626025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 2971223 - 2971308
Alignment:
Q  101 caattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||| ||| ||||||| ||||||| | ||||||||||||||||||| || ||||  ||||||||||| || |||||||||||||    
T  2971223 caattttacctt-aagaacagttcaatt-gattaattttcagaaattataaattatgactattgaaagataatcccacccttacctta 2971308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 11304207 - 11304245
Alignment:
Q  158 atcattgaaagatagtctcacccttaccttaattcagaa 196  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  11304207 atcattgagagatagtctcacccttaccttaattcagaa 11304245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 11311057 - 11311121
Alignment:
Q  132 ttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcagaa 196  Q
    |||||||| ||||||| || |  || || ||||| ||||||||||||||||||||||||||||||    
T  11311057 ttaatttttagaaattctacactattattattgagagatagtctcacccttaccttaattcagaa 11311121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 29181166 - 29181110
Alignment:
Q  132 ttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||||||||| |||| ||||  ||||||||||| || |||||||||||||    
T  29181166 ttaattttcagaaattacatattatgactattgaaagataatcccacccttacctta 29181110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 16091073 - 16091129
Alignment:
Q  132 ttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||| |||||||||||| |||| ||||  ||||||||||| || |||||||||||||    
T  16091073 ttaactttcagaaattacatattatgactattgaaagataatcccacccttacctta 16091129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 89 - 240
Target Start/End: Original strand, 23265097 - 23265250
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||||||||||| || |||||||||||||||||||| | |||||||||||||||||||  ||||| ||||| |||||||||||||||||||||    
T  23265097 aaccctaattctcaatttttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctt 23265196  T
Q  188 aattcagaaaatcgcacaacacacggatga-tcttggctctacttgttcatctc 240  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||||||| ||||    
T  23265197 aattcagaaaatcgcacgacacacgaatgattcttggctctacttgttcttctc 23265250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 89 - 240
Target Start/End: Original strand, 23280165 - 23280318
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||||||||||| || |||||||||||||||||||| | |||||||||||||||||||  ||||| ||||| |||||||||||||||||||||    
T  23280165 aaccctaattctcaatttttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctt 23280264  T
Q  188 aattcagaaaatcgcacaacacacggatga-tcttggctctacttgttcatctc 240  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||||||| ||||    
T  23280265 aattcagaaaatcgcacgacacacgaatgattcttggctctacttgttcttctc 23280318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 89 - 240
Target Start/End: Original strand, 21908315 - 21908466
Alignment:
Q  89 aaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||| | ||||||||| | ||||||||||  | |||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  21908315 aaccctaatccccaattttatatccaagaacaatatacttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T
Q  189 attcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    ||||||||||  ||||  ||  |||| |||||||||||||||||||| ||||    
T  21908415 attcagaaaaaagcacggcaatcggacgatcttggctctacttgttcttctc 21908466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 27207818 - 27207720
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||||||||||||||| ||||  |||| ||||||||||||||||||| || |  |||||||||||||| || |||||||||||||    
T  27207818 accctaattctcaattttatcttcaagaactattcttttagattaattttcagaaattatacattaaaatcattgaaagataatcccacccttacctta 27207720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 6483666 - 6483775
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  6483666 catcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 6483764  T
Q  181 ttaccttaatt 191  Q
    |||||||||||    
T  6483765 ttaccttaatt 6483775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 6487133 - 6487242
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  6487133 catcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 6487231  T
Q  181 ttaccttaatt 191  Q
    |||||||||||    
T  6487232 ttaccttaatt 6487242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 81 - 196
Target Start/End: Complemental strand, 19661560 - 19661446
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| |||||| | ||| || ||||||||| ||||||||||||||||| || ||||| || || ||| ||||||||||    
T  19661560 catcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcaccc 19661462  T
Q  181 ttaccttaattcagaa 196  Q
    ||||||||||| ||||    
T  19661461 ttaccttaatttagaa 19661446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 26885139 - 26885236
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||| ||| ||||||| |||| ||||| ||||||||||||||||||| || | ||| ||||||||||| || |||||||||||||    
T  26885139 accctaattctcaattttttctccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttacctta 26885236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 6743315 - 6743248
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  6743315 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 6743248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 43694508 - 43694575
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  43694508 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 43694575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 10546 - 10631
Alignment:
Q  101 caattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||| ||| ||||||||||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||||||||||    
T  10546 caattttacctt-aagaacaattcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 10631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 201729 - 201796
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    ||||| |||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  201729 tctcagccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 201796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 23168406 - 23168299
Alignment:
Q  84 catcaaaccctaattctcaatttt---atcttcaagaacaattcaattaggttaatttt-cagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||| ||||||||||||||||||   |||||||| ||| |||| ||||| |||||||| ||||||||||| || ||||||| ||||||||| || ||||    
T  23168406 catcataccctaattctcaatttttttatcttcaa-aactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacc 23168308  T
Q  180 cttacctta 188  Q
    |||||||||    
T  23168307 cttacctta 23168299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 23579663 - 23579556
Alignment:
Q  84 catcaaaccctaattctcaatttt---atcttcaagaacaattcaattaggttaatttt-cagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||| ||||||||||||||||||   |||||||| ||| |||| ||||| |||||||| ||||||||||| || ||||||| ||||||||| || ||||    
T  23579663 catcataccctaattctcaatttttttatcttcaa-aactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacc 23579565  T
Q  180 cttacctta 188  Q
    |||||||||    
T  23579564 cttacctta 23579556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 5706130 - 5706024
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||||| |||  ||  | ||||| ||| |||||||||||| ||||| ||| ||||||| || ||||| | ||| ||||||||||||||    
T  5706130 catcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattaatgagagatagtctcaccc 5706032  T
Q  181 ttacctta 188  Q
    ||||||||    
T  5706031 ttacctta 5706024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 25181015 - 25180930
Alignment:
Q  101 caattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||| ||| ||||||| ||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||||||||||    
T  25181015 caattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 25180930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 26583776 - 26583881
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||| ||||||  |||||||| || ||| | ||| || ||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||    
T  26583776 catcatcaagccctaaccctcaattt-attttccaaaactatgcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccc 26583873  T
Q  181 ttacctta 188  Q
    ||||||||    
T  26583874 ttacctta 26583881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 23101570 - 23101458
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatg-atcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  |||||||||||| |||||   ||  ||||||||| ||||||| ||||||| |||| ||  || | ||| |||||||||||||    
T  23101570 catcatcaaaccctaaccctcaattttatcctcaaggttaaa-caattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacc 23101472  T
Q  180 cttaccttaattca 193  Q
    ||||||||||||||    
T  23101471 cttaccttaattca 23101458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 24661578 - 24661635
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    |||||||||||||||||||| |||||||| || || ||| ||||||||||||||||||    
T  24661578 aattttcagaaattatatattatgatcatcgagagttagcctcacccttaccttaatt 24661635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 23878998 - 23879060
Alignment:
Q  124 caattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacct 186  Q
    ||||||||| ||||||  |||||||||||| || || | ||| ||||||||||||||||||||    
T  23878998 caattaggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 9242962 - 9243019
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    ||||||||||||  |||||| || ||||||||| | ||| ||||||||||||||||||    
T  9242962 aattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttaatt 9243019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 18712754 - 18712901
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    |||||||||||| |||||| |  |||||||||||||||||||| | |||||||||||||||||||  ||||| ||||| |||||||||||||| ||||||    
T  18712754 aaccctaattctaaatttttaatttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctt 18712853  T
Q  188 aattcagaaaatcgcacaacacacggatgatcttggctctacttgttc 235  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18712854 aattcagaaaatcgcacgacacacggatgatcttggctctacttgttc 18712901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 134 - 240
Target Start/End: Complemental strand, 19663571 - 19663465
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgt 233  Q
    |||||||||||||||||||  ||||| || || |||||||||||||||||||||| ||||| ||||||||| |||||||| |||||||||||||||||||    
T  19663571 aattttcagaaattatatactatgattatcgagagatagtctcacccttaccttatttcaggaaatcgcacgacacacgggtgatcttggctctacttgt 19663472  T
Q  234 tcatctc 240  Q
    || ||||    
T  19663471 tcttctc 19663465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 11158094 - 11158200
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgt 233  Q
    |||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||| |||||  ||  |||||||||||||||||||| ||    
T  11158094 aattttcagaaattatatattaagatcattgagagttagtctcacccttaccttaattcagaaaaacgcacggcaatcggatgatcttggctctactagt 11158193  T
Q  234 tcatctc 240  Q
    || ||||    
T  11158194 tcttctc 11158200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 32651527 - 32651635
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||| ||||||| || ||||||||||| |||||||| | |||||||||||||||||||  ||||| ||||| |||||||||||||||||||||    
T  32651527 aaccctaattcccaatttttattttcaagaacaactcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctt 32651626  T
Q  188 aattcagaa 196  Q
    |||| ||||    
T  32651627 aatttagaa 32651635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 20437131 - 20437021
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  |||||||| |||||| || ||| || ||||||||| ||||||||||||||||| || ||||| ||||| |||||||||||||    
T  20437131 catcatcaaaccctaaccctcaattt-atcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacc 20437033  T
Q  180 cttaccttaatt 191  Q
    ||||||||||||    
T  20437032 cttaccttaatt 20437021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 21543164 - 21543231
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  21543164 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 21543231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 42094959 - 42094897
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttc 235  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| |||||||||||    
T  42094959 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttc 42094897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 20805322 - 20805379
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    |||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||||    
T  20805322 aattttcagaaattatatattatgatcattgagagttagcctcacccttaccttaatt 20805379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 20851218 - 20851133
Alignment:
Q  101 caattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||| ||| ||||||| ||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||||||||||    
T  20851218 caattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 20851133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 20857845 - 20857760
Alignment:
Q  101 caattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||| ||| ||||||| ||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||||||||||    
T  20857845 caattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 20857760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 21706245 - 21706330
Alignment:
Q  101 caattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||| ||| ||||||| ||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||||||||||    
T  21706245 caattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 21706330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 21710787 - 21710872
Alignment:
Q  101 caattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||| ||| ||||||| ||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||||||||||    
T  21710787 caattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 21710872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 41112023 - 41112089
Alignment:
Q  121 attcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||||||||||    
T  41112023 attcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttacctta 41112089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 16372955 - 16373017
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcagaa 196  Q
    ||||||||||||  |||||| || ||||||||| | ||| |||||||||||||||||| ||||    
T  16372955 aattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttaatttagaa 16373017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 195
Target Start/End: Complemental strand, 25091445 - 25091411
Alignment:
Q  161 attgaaagatagtctcacccttaccttaattcaga 195  Q
    ||||| |||||||||||||||||||||||||||||    
T  25091445 attgagagatagtctcacccttaccttaattcaga 25091411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 20045004 - 20044952
Alignment:
Q  136 ttttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||| |||||||| | |||||||||| |||| || |||||||||||||    
T  20045004 ttttcagaatttatatattaagatcattgaaggataatcccacccttacctta 20044952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 89 - 240
Target Start/End: Original strand, 13587 - 13739
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||| ||||||| || |||||||||||||||||||| | |||||||||||||||| ||| | ||| ||||| |||||||||||||||||||||    
T  13587 aaccctaattcccaatttttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctt 13686  T
Q  188 aattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||||| ||||    
T  13687 aattcagaaaatcgcacgacacacggttgatattggctctacttgttcttctc 13739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 3e-45; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 89 - 240
Target Start/End: Complemental strand, 17240613 - 17240461
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||| ||||||| || |||||||||||||||||||| | |||||||||||||||| ||| | ||| ||||| |||||||||||||||||||||    
T  17240613 aaccctaattcccaatttttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctt 17240514  T
Q  188 aattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||||| ||||    
T  17240513 aattcagaaaatcgcacgacacacggttgatattggctctacttgttcttctc 17240461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 240
Target Start/End: Original strand, 18929201 - 18929352
Alignment:
Q  89 aaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||| | |||||||||||  |||||||||  | |||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  18929201 aaccctaatccccaattttatctcgaagaacaatatacttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T
Q  189 attcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||| ||||| |||  | || |||||||||||||||||||| ||||    
T  18929301 attcagaaaaacgcacgacagtcagacgatcttggctctacttgttcttctc 18929352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 196
Target Start/End: Original strand, 9534276 - 9534390
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  9534276 catcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 9534374  T
Q  181 ttaccttaattcagaa 196  Q
    ||||||||||||||||    
T  9534375 ttaccttaattcagaa 9534390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 13323895 - 13323788
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||| ||  ||||| ||||||||||||||||||||||  |||| | ||||||||||||||||| |||| ||||| ||||||||||| ||||||||    
T  13323895 catcatcaaccctaaattcccaattttatcttcaagaacaatctaatttgattaattttcagaaattacatattatgattattgaaagataatctcaccc 13323796  T
Q  181 ttacctta 188  Q
    ||||||||    
T  13323795 ttacctta 13323788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 20247895 - 20247784
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| |||||| | ||| || ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  20247895 catcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 20247797  T
Q  181 ttaccttaattca 193  Q
    |||||| ||||||    
T  20247796 ttacctgaattca 20247784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 196
Target Start/End: Complemental strand, 14762864 - 14762750
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| |||||| | ||| || ||||||||| ||||||||||||||||| || ||||| || || ||||||||||||||    
T  14762864 catcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcaccc 14762766  T
Q  181 ttaccttaattcagaa 196  Q
    ||||||||||| ||||    
T  14762765 ttaccttaatttagaa 14762750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 13302347 - 13302241
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||| ||  ||||| | |||||||||||||||||||| || || | ||||||||||||||||| |||| ||||| ||||||||||| ||||||||    
T  13302347 catcatcaaccctaaattccccattttatcttcaagaacaatgcattt-gattaattttcagaaattacatattatgattattgaaagataatctcaccc 13302249  T
Q  181 ttacctta 188  Q
    ||||||||    
T  13302248 ttacctta 13302241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 51301545 - 51301643
Alignment:
Q  89 aaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||| |||||||||  ||| ||||||||||||| | ||||||||||||||||| |||| ||||| |||| |||||| ||||||||||||||||    
T  51301545 aaccctaattcccaattttattctcatgaacaattcaatt-gattaattttcagaaattacatattatgattattggaagataatctcacccttacctta 51301643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 24192904 - 24193009
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  |||||||| |||||| || ||| || ||||||||| ||||||||||||||||| || ||||| ||||| |||||||||||||    
T  24192904 catcatcaaaccctaaccctcaattt-atcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacc 24193002  T
Q  180 cttacct 186  Q
    |||||||    
T  24193003 cttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 38310906 - 38310795
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| |||||| | ||| || ||||||||| ||| ||||||||||||| || ||||| || || ||||||||||||||    
T  38310906 catcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagatagtctcaccc 38310808  T
Q  181 ttaccttaattca 193  Q
    |||||| ||||||    
T  38310807 ttacctgaattca 38310795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 13313003 - 13312897
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||| ||  ||||| | |||||||||||||||||||| || || | |||||||||| |||||| |||| ||||| ||||||||||| ||||||||    
T  13313003 catcatcaaccctaaattccctattttatcttcaagaacaatccattt-gattaattttcaaaaattacatattatgattattgaaagataatctcaccc 13312905  T
Q  181 ttacctta 188  Q
    ||||||||    
T  13312904 ttacctta 13312897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 14085639 - 14085706
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  14085639 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 14085706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 14091040 - 14091107
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  14091040 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 14091107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 24933934 - 24933829
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||||| ||| | |||| ||| | ||| |||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||    
T  24933934 catcatcaaaccctaattttca-tattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccc 24933837  T
Q  181 ttacctta 188  Q
    ||||||||    
T  24933836 ttacctta 24933829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 49400639 - 49400706
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  49400639 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 49400706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 16801555 - 16801468
Alignment:
Q  100 tcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||| | | |  |||| |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  16801555 tcaattttatcttcaaaagctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttacctta 16801468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 23370613 - 23370506
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  | |||||| |||||| || ||| || ||||||||| ||||||||||||||||| || ||||| ||||| |||||||| ||||    
T  23370613 catcatcaaaccctaacccacaattt-atcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacc 23370515  T
Q  180 cttacctta 188  Q
    |||||||||    
T  23370514 cttacctta 23370506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 8579260 - 8579193
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| |||||||||||||||  ||||||| ||||||||| ||||||||||| ||||    
T  8579260 tctcacccttaccttagttcagaaaatcgcacggcacacggttgatcttggttctacttgttcttctc 8579193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 10389550 - 10389444
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||||| |||  ||  |||| || ||| |||||||||| ||| ||||||||||||||| || || |||||||||||||| || |||||    
T  10389550 catcatcaaaccctaattttcatattattcttaaa-aactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccaccc 10389452  T
Q  181 ttacctta 188  Q
    ||||||||    
T  10389451 ttacctta 10389444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 10414639 - 10414533
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||||| |||  ||  |||| || ||| |||||||||| ||| ||||||||||||||| || || |||||||||||||| || |||||    
T  10414639 catcatcaaaccctaattttcatattattcttaaa-aactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccaccc 10414541  T
Q  181 ttacctta 188  Q
    ||||||||    
T  10414540 ttacctta 10414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 10421309 - 10421203
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||||| |||  ||  |||| || ||| |||||||||| ||| ||||||||||||||| || || |||||||||||||| || |||||    
T  10421309 catcatcaaaccctaattttcatattattcttaaa-aactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccaccc 10421211  T
Q  181 ttacctta 188  Q
    ||||||||    
T  10421210 ttacctta 10421203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 12033530 - 12033445
Alignment:
Q  101 caattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||| ||| ||||||| ||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||||||||||    
T  12033530 caattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 12033445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 17131701 - 17131786
Alignment:
Q  101 caattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||| ||| ||||||| ||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||||||||||    
T  17131701 caattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 17131786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 41455164 - 41455098
Alignment:
Q  121 attcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||||||||||    
T  41455164 attcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttacctta 41455098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 3803833 - 3803870
Alignment:
Q  158 atcattgaaagatagtctcacccttaccttaattcaga 195  Q
    |||||||| |||||||||||||||||||||||||||||    
T  3803833 atcattgagagatagtctcacccttaccttaattcaga 3803870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 14865844 - 14865900
Alignment:
Q  132 ttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||||||||| |||| ||||  ||||||||||| || |||||||||||||    
T  14865844 ttaattttcagaaattacatattatgactattgaaagataatcccacccttacctta 14865900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 12306082 - 12306117
Alignment:
Q  158 atcattgaaagatagtctcacccttaccttaattca 193  Q
    |||||||| |||||||||||||||||||||||||||    
T  12306082 atcattgagagatagtctcacccttaccttaattca 12306117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 16801029 - 16801088
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattca 193  Q
    ||||||||||| |||||||| |  |||||||| || ||||||||||||||||| ||||||    
T  16801029 aattttcagaagttatatattacaatcattgagagttagtctcacccttacctgaattca 16801088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 5842895 - 5842929
Alignment:
Q  157 gatcattgaaagatagtctcacccttaccttaatt 191  Q
    |||||||||| ||||||||||||||||||||||||    
T  5842895 gatcattgaatgatagtctcacccttaccttaatt 5842929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 18614227 - 18614335
Alignment:
Q  88 aaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  18614227 aaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctt 18614326  T
Q  188 aattcagaa 196  Q
    |||| ||||    
T  18614327 aatttagaa 18614335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 81 - 196
Target Start/End: Complemental strand, 29643493 - 29643378
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||| || ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| |||| ||||| ||||||||||| ||||||||    
T  29643493 catcatcaacccttaattctcaattttatcttcatgaacaattcaatttgattaattttcagaaattacatattatgattattgaaagataatctcaccc 29643394  T
Q  181 ttaccttaattcagaa 196  Q
    ||||||||||| ||||    
T  29643393 ttaccttaatttagaa 29643378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 89 - 191
Target Start/End: Complemental strand, 23482153 - 23482050
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||| ||||||| || |||||||||||||||||||| | |||||||||||||||||||  ||||| ||||| |||||||||||||||||||||    
T  23482153 aaccctaattcccaatttttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctt 23482054  T
Q  188 aatt 191  Q
    ||||    
T  23482053 aatt 23482050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 44477571 - 44477677
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  44477571 catcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 44477669  T
Q  181 ttacctta 188  Q
    ||||||||    
T  44477670 ttacctta 44477677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 44492729 - 44492835
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  44492729 catcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 44492827  T
Q  181 ttacctta 188  Q
    ||||||||    
T  44492828 ttacctta 44492835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 23826248 - 23826315
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  23826248 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 23826315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 8727840 - 8727728
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    |||| |||||||||||  |||||||| |||||| || ||| || ||||||||| ||||||||||||||||| || ||||| |||||  |||| |||||||    
T  8727840 catcgtcaaaccctaaccctcaattt-atcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggataatctcacc 8727742  T
Q  180 cttaccttaattca 193  Q
    ||||||| ||||||    
T  8727741 cttacctgaattca 8727728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 19750504 - 19750612
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattagg-ttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacct 186  Q
    ||||||||||||||||||| || | |||||||||||||  ||   ||||||||||||||| |||||| ||  |||||||| | ||| |||||||||||||    
T  19750504 aaccctaattctcaatttttatttccaagaacaattcatgtaaaattaattttcagaaatcatatattatagtcattgaaggttagcctcacccttacct 19750603  T
Q  187 taattcaga 195  Q
    |||||||||    
T  19750604 taattcaga 19750612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 23866564 - 23866669
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||| ||| ||||||| || ||||| ||||| ||||||||||||||    
T  23866564 catcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattt-caggaattataaattatgattattgagagatagtctcaccc 23866661  T
Q  181 ttacctta 188  Q
    ||||||||    
T  23866662 ttacctta 23866669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 24320756 - 24320671
Alignment:
Q  101 caattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||| ||| ||||||| ||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||||||||||    
T  24320756 caattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 24320671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 17054540 - 17054644
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||| | ||| | |||| ||| | ||| |||||||||||| ||||| ||| ||||||| || ||||| ||||| ||||||||||||||    
T  17054540 catcatcaaaccctaactttca-tcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcaccc 17054637  T
Q  181 ttacctt 187  Q
    |||||||    
T  17054638 ttacctt 17054644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 39364921 - 39364983
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcagaa 196  Q
    |||||||||||||| ||||  || || ||||| ||||||||||||||||||||||||||||||    
T  39364921 aattttcagaaattctatactattattattgagagatagtctcacccttaccttaattcagaa 39364983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 21931698 - 21931759
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcaga 195  Q
    ||||||||||| |||||||| || |||||||| || ||| ||||||||||||||||||||||    
T  21931698 aattttcagaagttatatattataatcattgagagttagcctcacccttaccttaattcaga 21931759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 27940961 - 27940852
Alignment:
Q  81 catcatcaaaccctaattctcaatt-ttatctt-caagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcac 178  Q
    ||||||||||||||||||| ||||| |||| || |||||||||||| | |     ||||||||||||| |||||| || ||||||||| | ||| |||||    
T  27940961 catcatcaaaccctaattcccaattcttatttttcaagaacaattctaatcaaacaattttcagaaatcatatattataatcattgaaggttagcctcac 27940862  T
Q  179 ccttacctta 188  Q
    ||||||||||    
T  27940861 ccttacctta 27940852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 104 - 240
Target Start/End: Complemental strand, 102012 - 101875
Alignment:
Q  104 ttttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcagaaaatcgca 203  Q
    |||||| |||||||||||||||||||| | ||||||||| |||||||||  ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  102012 ttttattttcaagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttaccttaattcagaaaatcgca 101913  T
Q  204 caacacacggatga-tcttggctctacttgttcatctc 240  Q
    | ||||||  |||| |||||||||||||||||| ||||    
T  101912 cgacacacaaatgattcttggctctacttgttcttctc 101875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 240
Target Start/End: Original strand, 9187449 - 9187602
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggt-taattttcagaaattatatatcatgatcattgaaagatagtctcacccttacct 186  Q
    ||||||||||| ||||||| || |||||||||||||||||||| | || |||||||||||||| ||| | ||| ||||| ||||||||||||||||||||    
T  9187449 aaccctaattcccaatttttatattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagatagtctcacccttacct 9187548  T
Q  187 taattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||||| ||  |||| |||| |||||||||||||||| ||||    
T  9187549 taattcagaaaatcgcacgacttacggttgattttggctctacttgttcttctc 9187602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 31252379 - 31252477
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| || |||||| ||||||| ||||||||||||||||    
T  31252379 accctaattctcaattttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttacctta 31252477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 81 - 193
Target Start/End: Original strand, 4477805 - 4477917
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  | |||||| |||||| || ||| || ||||||||| ||||||||||||||||| || ||||| ||||| |||||||||||||    
T  4477805 catcatcaaaccctaacccacaattt-atcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacc 4477903  T
Q  180 cttaccttaattca 193  Q
    ||||||||||||||    
T  4477904 cttaccttaattca 4477917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 10986288 - 10986181
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  |||||||| |||||| || ||| || ||||||||| |||||| |||||||||| || ||||| |||||||||||||||||||    
T  10986288 catcatcaaaccctaaccctcaattt-atcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtctcacc 10986190  T
Q  180 cttacctta 188  Q
    |||||||||    
T  10986189 cttacctta 10986181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 81 - 196
Target Start/End: Original strand, 23057887 - 23058001
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| |||||| | ||| || ||||||||| ||||||||| ||||||| || ||||| || || ||||||||||||||    
T  23057887 catcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcaggaattatagattatgattatcgagagatagtctcaccc 23057985  T
Q  181 ttaccttaattcagaa 196  Q
    ||||||||||| ||||    
T  23057986 ttaccttaatttagaa 23058001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 23839146 - 23839256
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaaga-acaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  |||||||| |||||| | | || || ||||||||| ||||||||||||||||| || ||||| ||||| |||||||||||||    
T  23839146 catcatcaaaccctaaccctcaattt-atcttccaaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacc 23839244  T
Q  180 cttaccttaatt 191  Q
    ||||||||||||    
T  23839245 cttaccttaatt 23839256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 15458444 - 15458544
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaatttt--cagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||||||||||||  | || ||| |||||||||| ||||||||  |||||||||||||| || |||||||||||||| || ||||||||||||    
T  15458444 accctaattctcaattttattcttaaaaactattcaattagattaattttttcagaaattatatattataatcattgaaagataatcccacccttacctt 15458543  T
Q  188 a 188  Q
    |    
T  15458544 a 15458544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 15465039 - 15465139
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaatttt--cagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||||||||||||  | || ||| |||||||||| ||||||||  |||||||||||||| || |||||||||||||| || ||||||||||||    
T  15465039 accctaattctcaattttattcttaaaaactattcaattagattaattttttcagaaattatatattataatcattgaaagataatcccacccttacctt 15465138  T
Q  188 a 188  Q
    |    
T  15465139 a 15465139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 930203 - 930096
Alignment:
Q  80 acatcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    |||||||||||||||||  ||||||||  | ||||| ||| || ||||||||| |||||||||||| |||| || ||||| ||||| |||||||||||||    
T  930203 acatcatcaaaccctaaccctcaatttatttttcaa-aactatacaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacc 930105  T
Q  180 cttacctta 188  Q
    |||||||||    
T  930104 cttacctta 930096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 18800385 - 18800488
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  ||||||| ||| ||| | ||| |  ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  18800385 catcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 18800484  T
Q  181 ttac 184  Q
    ||||    
T  18800485 ttac 18800488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 34640093 - 34639987
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||||| ||  | |||| ||| | ||| |||||||||||| ||||||||||||||||| || | ||| ||||| ||||||||||||||    
T  34640093 catcatcaaaccctaattttct-tattattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcaccc 34639995  T
Q  181 ttacctta 188  Q
    ||||||||    
T  34639994 ttacctta 34639987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 11288753 - 11288669
Alignment:
Q  105 tttatcttcaagaacaattcaattaggttaatttt-cagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||| ||||||||| ||||  ||||||||||||| |||||||||||||| | ||||||||||||||| || |||||||||||||    
T  11288753 tttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttacctta 11288669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 12168312 - 12168417
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||| | ||| | |||| ||| | ||| |||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||    
T  12168312 catcatcaaaccctaactttca-tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccc 12168409  T
Q  181 ttacctta 188  Q
    ||||||||    
T  12168410 ttacctta 12168417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 19287221 - 19287326
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||| | ||| | |||| ||| | ||| |||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||    
T  19287221 catcatcaaaccctaactttca-tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccc 19287318  T
Q  181 ttacctta 188  Q
    ||||||||    
T  19287319 ttacctta 19287326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 19785975 - 19785870
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||| | ||| |||||| ||| | ||| |||||| ||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||    
T  19785975 catcatcaaaccctaactttca-ttttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccc 19785878  T
Q  181 ttacctta 188  Q
    ||||||||    
T  19785877 ttacctta 19785870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 19878405 - 19878510
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||| | ||| | |||| ||| | ||| |||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||    
T  19878405 catcatcaaaccctaactttca-tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccc 19878502  T
Q  181 ttacctta 188  Q
    ||||||||    
T  19878503 ttacctta 19878510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 29614254 - 29614147
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  ||||||||  | ||| | ||  || ||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  29614254 catcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 29614155  T
Q  181 ttacctta 188  Q
    ||||||||    
T  29614154 ttacctta 29614147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 34646728 - 34646661
Alignment:
Q  121 attcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||| ||||||||||||||||| || | ||| ||||| ||||||||||||||||||||||    
T  34646728 attcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttacctta 34646661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 25397174 - 25397236
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcagaa 196  Q
    |||||||||||||||||||| |||||||| || || ||| |||||||||||||||||||||||    
T  25397174 aattttcagaaattatatattatgatcatcgagagttagcctcacccttaccttaattcagaa 25397236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 19884181 - 19884286
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||| | ||| | |||| ||| | ||| |||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||    
T  19884181 catcatcaaaccctaactttca-tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccc 19884278  T
Q  181 ttacctta 188  Q
    | ||||||    
T  19884279 taacctta 19884286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 25598645 - 25598704
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattca 193  Q
    |||||||||||| ||||||| ||||||||||| || ||||||||||||||||| ||||||    
T  25598645 aattttcagaaaatatatattatgatcattgagagttagtctcacccttacctgaattca 25598704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 25348488 - 25348550
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcagaa 196  Q
    |||||||||||||| ||||  || || ||||| ||||||||||||||||||||||||||||||    
T  25348488 aattttcagaaattctatactattattattgagagatagtctcacccttaccttaattcagaa 25348550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 25469808 - 25469705
Alignment:
Q  82 atcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccct 181  Q
    ||||||||||||||||| ||| | |||| ||| | ||| |||||||||||| ||||| ||||| ||||| || ||||| ||||| |||||||||||||||    
T  25469808 atcatcaaaccctaattttca-tattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtctcaccct 25469712  T
Q  182 tacctta 188  Q
    |||||||    
T  25469711 tacctta 25469705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 12943149 - 12943187
Alignment:
Q  158 atcattgaaagatagtctcacccttaccttaattcagaa 196  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  12943149 atcattgagagatagtctcacccttaccttaattcagaa 12943187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 24512898 - 24512844
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||||  ||||| ||||| ||||||||||||||| ||||||    
T  24512898 aattttcagaaattatatactatgattattgagagatagtctcaccctcacctta 24512844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 19471389 - 19471332
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    ||||| |||||||||||||| |||||||| || || ||| ||||||||||||||||||    
T  19471389 aatttccagaaattatatattatgatcatcgagaggtagcctcacccttaccttaatt 19471332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 21477299 - 21477332
Alignment:
Q  162 ttgaaagatagtctcacccttaccttaattcaga 195  Q
    ||||||||||||||||||||||||||||||||||    
T  21477299 ttgaaagatagtctcacccttaccttaattcaga 21477332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 2286821 - 2286762
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattca 193  Q
    ||||||||||| |||||||| |  |||||||| || ||||||||||||||||| ||||||    
T  2286821 aattttcagaagttatatattacaatcattgagagttagtctcacccttacctgaattca 2286762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 28709588 - 28709622
Alignment:
Q  157 gatcattgaaagatagtctcacccttaccttaatt 191  Q
    |||||||||| ||||||||||||||||||||||||    
T  28709588 gatcattgaatgatagtctcacccttaccttaatt 28709622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 9185048 - 9184999
Alignment:
Q  139 tcagaaattatatatc-atgatcattgaaagatagtctcacccttacctt 187  Q
    |||||||||||||| | || |||||||| |||||||||||||||||||||    
T  9185048 tcagaaattatataaccattatcattgagagatagtctcacccttacctt 9184999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 21470799 - 21470832
Alignment:
Q  162 ttgaaagatagtctcacccttaccttaattcaga 195  Q
    |||||||||||||||||| |||||||||||||||    
T  21470799 ttgaaagatagtctcaccattaccttaattcaga 21470832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 5956 - 5858
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| || |||||||||||||| || |||||||||||||    
T  5956 accctaattctcaattttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttacctta 5858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 6e-34; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 14486623 - 14486720
Alignment:
Q  96 attctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattca 193  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  14486623 attcccaattttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcacccttacctgaattca 14486720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 27906216 - 27906320
Alignment:
Q  84 catcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccctta 183  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||||| || ||||||||||||||||| || ||||||||    
T  27906216 catcacaccctaattctcaattttatcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccaccctta 27906315  T
Q  184 cctta 188  Q
     ||||    
T  27906316 tctta 27906320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 16157830 - 16157896
Alignment:
Q  174 ctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||    
T  16157830 ctcacccttaccttaattcagaaaatcgcacgacacacggttgatctcggctctacttgttcttctc 16157896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 8834851 - 8834956
Alignment:
Q  89 aaccctaattctcaattt-tatcttcaagaacaattcaa-ttaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacct 186  Q
    |||||||||||||||||  ||| |||||||||||||||  |||  | |||||||||||||||||||| ||||||||||| || ||| |||||||||||||    
T  8834851 aaccctaattctcaattcctat-ttcaagaacaattcatgttaaatcaattttcagaaattatatattatgatcattgagagttagcctcacccttacct 8834949  T
Q  187 taattca 193  Q
    |||||||    
T  8834950 taattca 8834956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 53483653 - 53483759
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||||| |||  ||  | ||||| ||| |||||||||||| ||||| ||| ||||||| || ||||| ||||| ||||||||||||||    
T  53483653 catcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcaccc 53483751  T
Q  181 ttacctta 188  Q
    ||||||||    
T  53483752 ttacctta 53483759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 15408140 - 15408194
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  15408140 aattttcagaaattatatactatgattattgagagatagtctcacccttacctta 15408194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 13888643 - 13888700
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    ||||||||||||||||| || ||||||||||| || ||| ||||||||||||||||||    
T  13888643 aattttcagaaattatacattatgatcattgagagttagcctcacccttaccttaatt 13888700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 15245217 - 15245274
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    |||||||||||||||||||| | ||||||||| || ||| ||||||||||||||||||    
T  15245217 aattttcagaaattatatattacgatcattgagagttagcctcacccttaccttaatt 15245274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 11848108 - 11848168
Alignment:
Q  128 taggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||| ||||||||| ||||||| || ||||| ||||| ||||||||||||||||||||||    
T  11848108 taggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 11848168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 8045933 - 8045833
Alignment:
Q  86 tcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacc 185  Q
    |||||||||||  |||||||| || ||| | ||| || ||||||||| ||||| ||||||||||| || ||||| || || |||||||||||||||||||    
T  8045933 tcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattt-cagaaattatagattatgattatcgagagatagtctcacccttacc 8045836  T
Q  186 tta 188  Q
    |||    
T  8045835 tta 8045833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 15308122 - 15308179
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    |||||||||||||||||||| | ||||||||| || ||| |||||||||| |||||||    
T  15308122 aattttcagaaattatatattacgatcattgagagttagcctcacccttaacttaatt 15308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 18213769 - 18213826
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    ||||||||||||| |||||| || ||||||||| | ||| ||||||||||||||||||    
T  18213769 aattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttaatt 18213826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 16146887 - 16146831
Alignment:
Q  132 ttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||||||||| |||| ||||  ||||||||||| || |||||||||||||    
T  16146887 ttaattttcagaaattacatattatgactattgaaagataatcccacccttacctta 16146831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 134 - 240
Target Start/End: Complemental strand, 34330 - 34224
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgt 233  Q
    |||||||||||||||||||  ||||| || || |||||||||||||||||||||| ||||| ||||||||| |||||||| |||||||||||||||||||    
T  34330 aattttcagaaattatatactatgattatcgagagatagtctcacccttaccttatttcaggaaatcgcacgacacacgggtgatcttggctctacttgt 34231  T
Q  234 tcatctc 240  Q
    || ||||    
T  34230 tcttctc 34224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 116851 - 116959
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    |||||||||||| |||||| || |||||||||||||||||||| | |||||||||||||||||||  ||||| ||||| |||||||||||||||||||||    
T  116851 aaccctaattctaaatttttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctt 116950  T
Q  188 aattcagaa 196  Q
    |||| ||||    
T  116951 aatttagaa 116959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 89 - 195
Target Start/End: Complemental strand, 108 - 1
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||| ||||||| || |||||||||||||||||||| | |||||||||||||||| ||| | ||| ||||| |||||||||||||||||||||    
T  108 aaccctaattcccaatttttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctt 9  T
Q  188 aattcaga 195  Q
    ||||||||    
T  8 aattcaga 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 30805 - 30912
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||| |||||||||| |||| | ||| || ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  30805 catcatcaaaccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 30904  T
Q  181 ttacctta 188  Q
    ||||||||    
T  30905 ttacctta 30912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 10649 - 10551
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| || | ||||||||||||||| || ||| |||||||||    
T  10649 accctaattctcaattttatcttcaagaactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttacctta 10551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 23674 - 23570
Alignment:
Q  84 catcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccctta 183  Q
    ||||| |||||||||||||||||| ||||||||||| ||||  |||| ||||||||||||||||||| || ||||||||| ||||||| || ||||||||    
T  23674 catcacaccctaattctcaattttgtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccaccctta 23575  T
Q  184 cctta 188  Q
    |||||    
T  23574 cctta 23570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 3501 - 3403
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||||||||||||||| ||||  |||| |||||||||||||||||||||| |   ||||||||||||| | ||||||||||||||    
T  3501 accctaattctcaattttatcttcaagaactattcttttagattaattttcagaaattatatattaaattcattgaaagataatatcacccttacctta 3403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 73235 - 73337
Alignment:
Q  84 catcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccctta 183  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||| |||||||||| |||||||| || ||||||||||||||||| || ||||||||    
T  73235 catcacaccctaattctcaattttatcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccaccctta 73334  T
Q  184 cct 186  Q
    |||    
T  73335 cct 73337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 11957 - 11851
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||| ||||||||| || ||| | ||| || ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  11957 catcatcaaaccctaactctcaattt-attttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 11859  T
Q  181 ttacctta 188  Q
    ||||||||    
T  11858 ttacctta 11851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 111634 - 111740
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  111634 catcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 111732  T
Q  181 ttacctta 188  Q
    ||||||||    
T  111733 ttacctta 111740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 493126 - 493029
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||| ||||||||| ||||||| |||| ||||| ||||||||||||||||||| || | ||| ||||||||||| ||||||||||||||||    
T  493126 accctaattctctattttatctccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttacctta 493029  T

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Target: scaffold0249 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 13994 - 13895
Alignment:
Q  90 accctaattctcaattttatcttcaagaacaattcaattaggttaatttt-cagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||||||||||||  | || ||| |||||||||| |||||||| |||||||||||||| || |||||||||||||| || |||||||||||||    
T  13994 accctaattctcaattttattcttaaaaactattcaattagattaatttttcagaaattatatattataatcattgaaagataatcccacccttacctta 13895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 11289 - 11396
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  ||||||| ||| ||| | ||| |  ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  11289 catcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 11388  T
Q  181 ttacctta 188  Q
    ||||||||    
T  11389 ttacctta 11396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 10195 - 10293
Alignment:
Q  89 aaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||| |||||||||  ||| ||||||||||||| | ||||||||||||||||| |||| ||||| |||| |||||| ||||||||||||||||    
T  10195 aaccctaattcccaattttattctcatgaacaattcaatt-gattaattttcagaaattacatattatgattattggaagataatctcacccttacctta 10293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 135386 - 135492
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||| || || ||||||||||||||| ||| ||||||| ||||||| | |||||||||||||||||||||| ||||  ||||||||||| |||||| |    
T  135386 catcattaacccttaattctcaattttacctttaagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatctcacgc 135484  T
Q  181 ttacctta 188  Q
    ||||||||    
T  135485 ttacctta 135492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 14503 - 14398
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  |||||||| |||||| || ||| || ||||||||| ||||||||||||||||| || ||||| ||||| |||||||||||||    
T  14503 catcatcaaaccctaaccctcaattt-atcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacc 14405  T
Q  180 cttacct 186  Q
    |||||||    
T  14404 cttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 856 - 751
Alignment:
Q  83 tcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccctt 182  Q
    ||||||||||||||  ||||||||  | | ||| ||| || ||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||||    
T  856 tcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctt 757  T
Q  183 acctta 188  Q
    ||||||    
T  756 acctta 751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 111830 - 111937
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaatttt-cagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  |||||||| |||||| | ||| || ||||||||| |||||| ||||||||||| || ||||| ||||| |||||||||||||    
T  111830 catcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcacc 111928  T
Q  180 cttacctta 188  Q
    |||||||||    
T  111929 cttacctta 111937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 91259 - 91203
Alignment:
Q  132 ttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||||||| |||||| || || ||||||||||  || |||||||||||||    
T  91259 ttaattttcagaaatcatatattatcattattgaaagatgatcccacccttacctta 91203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 96985 - 96929
Alignment:
Q  132 ttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||||||| |||||| || || ||||||||||  || |||||||||||||    
T  96985 ttaattttcagaaatcatatattatcattattgaaagatgatcccacccttacctta 96929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 196
Target Start/End: Complemental strand, 1591 - 1477
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||| || || |||||| |||||||||||| | ||||||  ||||||| ||||||||||||||||  |||| | |||||||| |||||| ||||||||    
T  1591 catcattaacccttaattcccaattttatctttatgaacaac-caattagattaattttcagaaattgcatattaagatcattgcaagataatctcaccc 1493  T
Q  181 ttaccttaattcagaa 196  Q
    ||||||||||| ||||    
T  1492 ttaccttaatttagaa 1477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 2019 - 1913
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||| || || |||||| ||||||||  |||||||||| ||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||    
T  2019 catcattaacccttaattcccaattttactttcaagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccaccc 1921  T
Q  181 ttacctta 188  Q
    ||||||||    
T  1920 ttacctta 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 39509 - 39576
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  39509 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 39576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 29214 - 29147
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  29214 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 29147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 34615 - 34548
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  34615 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 34548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 46048 - 45981
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  46048 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 45981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 51452 - 51385
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  51452 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 51385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 69701 - 69809
Alignment:
Q  89 aaccctaattctcaat-tttatcttcaagaacaattcaa-ttaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacct 186  Q
    ||||||||||| |||| ||||||| |||||||||||||  |||  ||  |||||| ||||||||||| | |||||||||||| |||||||||||||||||    
T  69701 aaccctaattcccaatctttatct-caagaacaattcatgttaaattttttttcataaattatatattaagatcattgaaagttagtctcacccttacct 69799  T
Q  187 taattcagaa 196  Q
    ||||| ||||    
T  69800 taatttagaa 69809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 2014 - 2118
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattca-attaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacct 186  Q
    ||||||||||| ||||||| || ||||||||||||||| |||| || |||||||||||||||||||  |  |||||||| || ||| |||| ||||||||    
T  2014 aaccctaattcccaatttttattttcaagaacaattcatattaagtcaattttcagaaattatataatacaatcattgagagttagcctcagccttacct 2113  T
Q  187 taatt 191  Q
    |||||    
T  2114 taatt 2118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 173630 - 173563
Alignment:
Q  173 tctcacccttaccttaattcagaaaatcgcacaacacacggatgatcttggctctacttgttcatctc 240  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  173630 tctcacccttaccttagttcagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 173563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 685 - 769
Alignment:
Q  105 tttatcttcaagaacaattcaattaggttaatttt-cagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||| ||||||||| ||||  ||||||||||||| |||||||||||||| | ||||||||||||||| || |||||||||||||    
T  685 tttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttacctta 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 10303 - 10196
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  | |||||| |||||| || ||| || ||||||||| ||||||||||||||||| || ||||| ||||| |||||||| ||||    
T  10303 catcatcaaaccctaacccacaattt-atcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacc 10205  T
Q  180 cttacctta 188  Q
    |||||||||    
T  10204 cttacctta 10196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 1633 - 1526
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttc-aagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  | |||||| |||||| || ||| || ||||||||| ||||||||||||||||| || ||||| ||||| |||||||| ||||    
T  1633 catcatcaaaccctaacccacaattt-atcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacc 1535  T
Q  180 cttacctta 188  Q
    |||||||||    
T  1534 cttacctta 1526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 191
Target Start/End: Complemental strand, 2729 - 2625
Alignment:
Q  89 aaccctaattctcaatt-ttatcttcaagaacaattcaa-ttaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacct 186  Q
    ||||||||||||||||| |||| |||||||||||||||  |||  | ||||||||||| |||||||| || |||||||| || ||| |||||||||||||    
T  2729 aaccctaattctcaattcttattttcaagaacaattcatgttaaatcaattttcagaagttatatattataatcattgagagttagcctcacccttacct 2630  T
Q  187 taatt 191  Q
    |||||    
T  2629 taatt 2625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 9284 - 9390
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||| || || |||||| ||||||||  || ||||||| ||||||| | |||||||||||||||||||||| ||||  ||||||||||| || |||||    
T  9284 catcattaacccttaattcccaattttacttttaagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccaccc 9382  T
Q  181 ttacctta 188  Q
    ||||||||    
T  9383 ttacctta 9390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 45381 - 45275
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||||| |||  ||  | ||||| ||| |||||||||||| ||||| ||| ||||||| || ||||| ||||| ||||||||||||||    
T  45381 catcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcaccc 45283  T
Q  181 ttacctta 188  Q
    ||||||||    
T  45282 ttacctta 45275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 15051 - 14994
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    |||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||    
T  15051 aattttcagaaattatatattaagatcattgagagttagtctcacccttaccttaatt 14994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 12298 - 12355
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    |||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||||    
T  12298 aattttcagaaattatatattatgatcattgagagttagcctcacccttaccttaatt 12355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 922 - 986
Alignment:
Q  124 caattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||| |||||||||||| |||| || ||||| ||||| ||||||||||||||||||||||    
T  922 caattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttacctta 986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 8067 - 8131
Alignment:
Q  124 caattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||| |||||||||||| |||| || ||||| ||||| ||||||||||||||||||||||    
T  8067 caattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttacctta 8131  T

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Target: scaffold0090 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 18160 - 18224
Alignment:
Q  124 caattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||| |||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  18160 caattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttacctta 18224  T

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Target: scaffold0796 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 1838 - 1733
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||| | ||| | |||| ||| | ||| |||||||||||| ||||| ||| ||||||| || ||||| ||||| ||||||||||||||    
T  1838 catcatcaaaccctaactttca-tattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcaccc 1741  T
Q  181 ttacctta 188  Q
    ||||||||    
T  1740 ttacctta 1733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 5861 - 5756
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    |||||||||||||||| | ||| | |||| ||| | ||| |||||||||||| ||||| ||| ||||||| || ||||| ||||| ||||||||||||||    
T  5861 catcatcaaaccctaactttca-tattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcaccc 5764  T
Q  181 ttacctta 188  Q
    ||||||||    
T  5763 ttacctta 5756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 240 - 345
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccc 180  Q
    ||||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||| ||||||||||| || ||| | ||||| ||||||||||||||    
T  240 catcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattt-cagaaattatagattatggttattgagagatagtctcaccc 337  T
Q  181 ttacctta 188  Q
    ||||||||    
T  338 ttacctta 345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 40586 - 40532
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  40586 aattttcagaaattatatactatgattattgagagatagtctcacccttacctta 40532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 135474 - 135528
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  135474 aattttcagaaattatatactatgattattgagagatagtctcacccttacctta 135528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 1129 - 1232
Alignment:
Q  83 tcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccctt 182  Q
    ||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||| ||| ||||||| || ||||| ||||| ||||||||||||||||    
T  1129 tcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcaccctt 1226  T
Q  183 acctta 188  Q
    ||||||    
T  1227 acctta 1232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 50130 - 50233
Alignment:
Q  83 tcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaattatatatcatgatcattgaaagatagtctcaccctt 182  Q
    ||||||||||||||  |||||||| || ||| | ||| || ||||||||| ||||| ||| ||||||| || ||||| ||||| ||||||||||||||||    
T  50130 tcatcaaaccctaaccctcaattt-attttccaaaactatgcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcaccctt 50227  T
Q  183 acctta 188  Q
    ||||||    
T  50228 acctta 50233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 196
Target Start/End: Complemental strand, 11128 - 11013
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaattttcagaaa-ttatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||| || |||| | |||||||||| | | ||||||  ||||||| |||||||||||||| ||  |||| | |||||||| |||||| |||||||    
T  11128 catcatcaacccttaatccccaattttatccttatgaacaaa-caattagattaattttcagaaaattgcatattaagatcattgcaagataatctcacc 11030  T
Q  180 cttaccttaattcagaa 196  Q
    |||||||||||| ||||    
T  11029 cttaccttaatttagaa 11013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 22646 - 22594
Alignment:
Q  135 attttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||||||||||  ||||| ||||| |||||||||||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttacctt 22594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 2005 - 1898
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaatttt-cagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  ||||| || || ||| | ||| || ||||||||| |||||| ||||||||||| || ||||| ||||| | |||||||||||    
T  2005 catcatcaaaccctaaccctcaaatt-attttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacc 1907  T
Q  180 cttacctta 188  Q
    |||||||||    
T  1906 cttacctta 1898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 8682 - 8575
Alignment:
Q  81 catcatcaaaccctaattctcaattttatcttcaagaacaattcaattaggttaatttt-cagaaattatatatcatgatcattgaaagatagtctcacc 179  Q
    ||||||||||||||||  ||||| || || ||| | ||| || ||||||||| |||||| ||||||||||| || ||||| ||||| | |||||||||||    
T  8682 catcatcaaaccctaaccctcaaatt-attttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacc 8584  T
Q  180 cttacctta 188  Q
    |||||||||    
T  8583 cttacctta 8575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 187
Target Start/End: Complemental strand, 39584 - 39508
Alignment:
Q  112 tcaagaacaattcaatt-aggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctt 187  Q
    ||||||||||||||||| |  | ||||||| |||||||||||| ||||||||||| || ||| ||||||||||||||    
T  39584 tcaagaacaattcaatttaaatcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctt 39508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 52203 - 52307
Alignment:
Q  89 aaccctaattctcaatttt-atcttcaagaacaattcaatt-aggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacct 186  Q
    ||||||||||||| ||||| || |||||||||||||||| | |  | |||||||| |||| |||||| || ||||||||| | ||| |||||||||||||    
T  52203 aaccctaattctcgatttttattttcaagaacaattcaaatcaaatcaattttcataaatcatatattataatcattgaaggttagcctcacccttacct 52302  T
Q  187 taatt 191  Q
    |||||    
T  52303 taatt 52307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 121858 - 121965
Alignment:
Q  89 aaccctaattctcaattt-tatcttcaagaacaattcaa-ttaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacct 186  Q
    |||||||||||||||||  ||| |||||||||||||||  |||  | ||||||||||  |||||||| || |||||||| || ||| |||||||||||||    
T  121858 aaccctaattctcaattcctat-ttcaagaacaattcatgttaactcaattttcagattttatatattataatcattgagagttagcctcacccttacct 121956  T
Q  187 taattcaga 195  Q
    |||||||||    
T  121957 taattcaga 121965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 132734 - 132841
Alignment:
Q  89 aaccctaattctcaattt-tatcttcaagaacaattcaa-ttaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacct 186  Q
    |||||||||||||||||  ||| |||||||||||||||  |||  | ||||||||||  |||||||| || |||||||| || ||| |||||||||||||    
T  132734 aaccctaattctcaattcctat-ttcaagaacaattcatgttaactcaattttcagattttatatattataatcattgagagttagcctcacccttacct 132832  T
Q  187 taattcaga 195  Q
    |||||||||    
T  132833 taattcaga 132841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 1453 - 1507
Alignment:
Q  137 tttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    |||||||||||||| || | ||||||||| || ||||||||||||||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaatt 1507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 17644 - 17698
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||||||||| || ||| | ||||| ||||||||||||||||||||||    
T  17644 aattttcagaaattatacattatggttattgagagatagtctcacccttacctta 17698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 222259 - 222202
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    ||||||||||| |||||||| |  ||||||||||| ||| ||||||||||||||||||    
T  222259 aattttcagaagttatatattacaatcattgaaagttagcctcacccttaccttaatt 222202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 6931 - 7038
Alignment:
Q  89 aaccctaattctcaattt-tatcttcaagaacaattcaa-ttaggttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacct 186  Q
    |||||||||||||||||  ||| |||||||||||||||  |||  | ||||||||||| ||| |||| || |||||||| || ||| |||||||||| ||    
T  6931 aaccctaattctcaattcctat-ttcaagaacaattcatgttaaatcaattttcagaagttagatattataatcattgagagttagcctcacccttatct 7029  T
Q  187 taattcaga 195  Q
    |||||||||    
T  7030 taattcaga 7038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 79547 - 79491
Alignment:
Q  132 ttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    ||||||||||||||||| |||| ||||  ||||||||||| || |||||||||||||    
T  79547 ttaattttcagaaattacatattatgactattgaaagataatcccacccttacctta 79491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 1615 - 1581
Alignment:
Q  157 gatcattgaaagatagtctcacccttaccttaatt 191  Q
    |||||||||| ||||||||||||||||||||||||    
T  1615 gatcattgaatgatagtctcacccttaccttaatt 1581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 734 - 791
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    ||||||||||| |||||||| || |||||||| || ||| ||||||| ||||||||||    
T  734 aattttcagaagttatatattataatcattgagagttagcctcacccctaccttaatt 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 1490 - 1523
Alignment:
Q  158 atcattgaaagatagtctcacccttaccttaatt 191  Q
    |||||||| |||||||||||||||||||||||||    
T  1490 atcattgagagatagtctcacccttaccttaatt 1523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 8824 - 8767
Alignment:
Q  134 aattttcagaaattatatatcatgatcattgaaagatagtctcacccttaccttaatt 191  Q
    ||||||||||||  |||||| || ||||||||| | ||| ||||||||||||||||||    
T  8824 aattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttaatt 8767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 50027 - 49971
Alignment:
Q  132 ttaattttcagaaattatatatcatgatcattgaaagatagtctcacccttacctta 188  Q
    |||||||| |||||||| |||| ||||  ||||||||||| || |||||||||||||    
T  50027 ttaatttttagaaattacatattatgactattgaaagataatcccacccttacctta 49971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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