View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0426_low_3 (Length: 426)
Name: NF0426_low_3
Description: NF0426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0426_low_3 |
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Alignment Details
Target: chr5 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 29 - 321
Target Start/End: Original strand, 7833589 - 7833884
Alignment:
| Q |
29 |
aaaaccaatatacattatctatctatcttcaataaccctagggtgaacacaaagatttgaatcctctacttggtttaattgactttagcggtcgggatgc |
128 |
Q |
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| T |
7833589 |
aaaaccaacatacactatctatctatcttcgataactctcgggtgaacacaaatatttgaaccctctacttggtttaattgactttagcggtcgggatgc |
7833688 |
T |
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| Q |
129 |
ttgcaaatactcctacttccatctcctctattcttgctcgacacaaacctacattatgatcaccacaaatcagaagcaaatagcatcaattacgttgtta |
228 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
7833689 |
ttgcaaatactcctacttccatctcctctattcttgctcgacacaaacctacattatgatcaccacaaatcagaagcaaatagcatcaattacattgtta |
7833788 |
T |
|
| Q |
229 |
aggaaacaagctaagtcaccaacattatgatccggtccaaggaaatagtggattgcagataat---gcagcagcaggcgcacaaagtcaccaacac |
321 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
7833789 |
aggaaacaagctaagtcaccaacattatgatccggtccaaggaaatagtggattgcagataatgcagcagcagcaggcgcacaaagtcaccaacac |
7833884 |
T |
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