View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0427_high_2 (Length: 363)
Name: NF0427_high_2
Description: NF0427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0427_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 23 - 361
Target Start/End: Original strand, 16961386 - 16961724
Alignment:
| Q |
23 |
atcatcaagtactagtgattgaagattgttaagatgtgaaagctgagatggtatttctccactaaagtaatttgagctaatgttaagtatttctagtgaa |
122 |
Q |
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| T |
16961386 |
atcatcaagtactaatgattgaagattgttaagatgtgaaagttgagatggtatttctccactaaagtaatttgagctaatgttaagtatttctagtgaa |
16961485 |
T |
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| Q |
123 |
gataattgagctattgtttcaggtagtggcccccataaaccaagagaaaccaaagagagtactttcaagcttgataaagtggaaagtgttgaaaagagtg |
222 |
Q |
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| T |
16961486 |
gataattgagctattgtttcaggtagtggcccccataaaccaagtgaaaccaaagagagtactttcaagcttgataaagtggaaagtgttgaaaagagtg |
16961585 |
T |
|
| Q |
223 |
tgtatgagttgaaattttgaggcaatgaagtaaactcattgttgtttccaacaacatgcaactgtgtaacattttcttcatagcacactagtgttaaata |
322 |
Q |
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|||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16961586 |
tgtatgagttgaaattttgaggcaatgaggtgaactcattggtgtttccaacaacatgcaactgtgtaacattttcttcatagcacactagtgttaaata |
16961685 |
T |
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| Q |
323 |
tggagtaggttcaatgttgcagaaatctgtgatgctgct |
361 |
Q |
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||||||||||||||||||||||||||||||| ||||||| |
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| T |
16961686 |
tggagtaggttcaatgttgcagaaatctgtggtgctgct |
16961724 |
T |
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