View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0428-Insertion-5 (Length: 102)

Name: NF0428-Insertion-5
Description: NF0428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0428-Insertion-5
NF0428-Insertion-5
[»] chr3 (1 HSPs)
chr3 (7-102)||(47407045-47407140)


Alignment Details
Target: chr3 (Bit Score: 96; Significance: 1e-47; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 1e-47
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 47407045 - 47407140
Alignment:
7 aaataaagcaaaacatcaaaacagtatgagcttgggccctaatctaactgtctgctccgtggactcataaccgacacgcttggattctgtatgaca 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
47407045 aaataaagcaaaacatcaaaacagtatgagcttgggccctaatctaactgtctgctccgtggactcataaccgacacgcttggattctgtatgaca 47407140  T

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