View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0428_2D_low_5 (Length: 609)
Name: NF0428_2D_low_5
Description: NF0428_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0428_2D_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 575; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 575; E-Value: 0
Query Start/End: Original strand, 1 - 599
Target Start/End: Complemental strand, 21469637 - 21469039
Alignment:
| Q |
1 |
ataaaggtttaaatatcctccttgatatagtttgcaagaaaagaaaaagtaatgaagaaagattacttcaaatctcacaattattaaaactaaaatatcc |
100 |
Q |
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| T |
21469637 |
ataaaggtttatatatcctccttgatatagtttgcaagaaaagaaaaagtaatgaagaaagattacttcaaatctcacaattattaaaactaaaatatcc |
21469538 |
T |
|
| Q |
101 |
ttatacacaatcaaacaataataatgaagctgaagcacttaaaatcaaatagaaaccaaatcactcatgctaagaaattctagttccctagtcacattgc |
200 |
Q |
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|||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21469537 |
ttatacacaatcaaaccataattatgaagctgaagcacttaaaatcaaatagaaaccaaatcactcatgctaagaaattctagttccctagtcacattgc |
21469438 |
T |
|
| Q |
201 |
tgttattaactatttcaaagttactttagtgttgtagaactattagaagagtaatgcaatttcatatttgtgttgctgctgcttgatgttggacatgaat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21469437 |
tgttattaactatttcaaagttactttagtgttgtagaactattagaagagtaatgcaatttcatatttgtgttgctgctgcttgatgttggacatgaat |
21469338 |
T |
|
| Q |
301 |
gtttcatcccttcgacttgttcttcgttagaacgattactttcatgttgatcatttgtagaagatccatcgaaaactttcacacattcatctctctcctg |
400 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21469337 |
gtttcatcccttcgacttgttcttcgttagaacgattactttcatgttgatcatttgtagaagatccatcgaaaactttcacacattcatctctctcctg |
21469238 |
T |
|
| Q |
401 |
tttaatctctttcatcattgcgaccacatctttcattgtcggtctatcatctggacttggagttacacataacaaagcaacacctaaagtctgcaacatt |
500 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21469237 |
tttaatctctttcatcattgcgaccacatctttcattgtcggtctatcatctggacttggagttacacataacaaagcaacacctaaagtctgcaacatt |
21469138 |
T |
|
| Q |
501 |
tcttcaatttcggattctggccttgctcttaagctttcatcgagcacttcaactccacctcttttttgtctaacccaatcaacaatgtgatgtccatct |
599 |
Q |
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||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
21469137 |
tcttcgatttcagattctggccttgctcttaagctttcatcgagcacttcaactccacctcttttttgtctaacccaatcaacaatgtgaagtccatct |
21469039 |
T |
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