View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0428_high_1 (Length: 756)

Name: NF0428_high_1
Description: NF0428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0428_high_1
NF0428_high_1
[»] chr7 (1 HSPs)
chr7 (79-745)||(21395776-21396443)


Alignment Details
Target: chr7 (Bit Score: 640; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 640; E-Value: 0
Query Start/End: Original strand, 79 - 745
Target Start/End: Original strand, 21395776 - 21396443
Alignment:
Q  79 tccttccatggtgcttaatgaatcaatcgccatgttctttgcatatgggatcatttaaatattgaatgcagaatattttatttgccagcttaaccacatg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21395776 tccttccatggtgcttaatgaatcaatcgccatgttctttgcatatgggatcatttaaatattgaatgcagaatattttatttgccagcttaaccacatg 21395875  T
Q  179 ctaatgttctgagatccgaccatttcggtcataataaatttcttgtctttattatttgattttccttatctgaaaattgcttttacaagtacaaacattt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21395876 ctaatgttctgagatccgaccatttcggtcataataaatttcttgtctttattatttgattttccttatctgaaaattgcttttacaagtacaaacattt 21395975  T
Q  279 ttatctttatgtgcctaaaatccaatcttcatgacttcaatcacgttattttgttttatgtatacttttttcccttgttattgatagatttagattgttt 378  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21395976 ttatctttacgtgcctaaaatccaatcttcatgacttcaatcacgttattttgttttatgtatacttttttcccttgttattgataaatttagattgttt 21396075  T
Q  379 tatgtatagtttgatttaaacttcttccctttcatttcttgtatagtggtcccctcttaaacacatgtcttggcggagatttggtgaaagttactttctc 478  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21396076 tatgtatagtttgatttaaacctcttccctttcatttcttgtatagtggtcccctcttaaacacatgtcttggcggagatttggtgaaagttactttctc 21396175  T
Q  479 ccatgtttctttggtttacgaaatttatacaataaattataattattgggtctttgtttattatcaccttttctaattttttaatatgagctaccctttc 578  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21396176 ccatgtttctttggtttacgaaatttatacaataaattataattattgggtctttgtttatcatcaccttttctaattttttaatatgagctaccctttc 21396275  T
Q  579 tactcaatctaagcttaattatggccaggggacacatttcagtattcagggtagttgtttttgcatgaacttcaagatcctcatgatgtttttagaatta 678  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21396276 tactcaatctaagcttaattatggctaggggacacatttcagtattcagggtagttgtttttgcatgaacttcaagatcctcatgatgtttttagaatta 21396375  T
Q  679 tgctagttatcccttgtttgtc-tttttatacctcccacatacatttctaattagactttaacttcat 745  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21396376 tgctagttatcccttgtttgtcttttttatacctcccacatacatttctaattagactttaacttcat 21396443  T

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