View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0429_low_16 (Length: 281)

Name: NF0429_low_16
Description: NF0429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0429_low_16
NF0429_low_16
[»] chr6 (46 HSPs)
chr6 (51-268)||(27283707-27283924)
chr6 (57-271)||(27623058-27623272)
chr6 (57-271)||(28214094-28214316)
chr6 (57-271)||(30551331-30551553)
chr6 (57-271)||(34457837-34458059)
chr6 (57-271)||(27064127-27064349)
chr6 (49-222)||(26927427-26927608)
chr6 (49-222)||(27209574-27209755)
chr6 (49-222)||(27239473-27239654)
chr6 (57-271)||(29579660-29579882)
chr6 (49-222)||(16756496-16756677)
chr6 (49-248)||(22928198-22928406)
chr6 (49-203)||(24870402-24870564)
chr6 (57-271)||(26665988-26666210)
chr6 (57-271)||(26771959-26772181)
chr6 (57-271)||(27355434-27355656)
chr6 (50-222)||(24299105-24299285)
chr6 (57-235)||(4539110-4539296)
chr6 (49-195)||(15405874-15406028)
chr6 (49-195)||(15417661-15417815)
chr6 (57-222)||(33369781-33369954)
chr6 (106-271)||(4779537-4779702)
chr6 (57-235)||(13517545-13517731)
chr6 (57-235)||(27200859-27201045)
chr6 (57-235)||(27248188-27248374)
chr6 (57-222)||(29508096-29508269)
chr6 (57-222)||(29556231-29556404)
chr6 (49-217)||(27025822-27025998)
chr6 (49-217)||(27031701-27031877)
chr6 (57-271)||(8899028-8899250)
chr6 (49-222)||(13292288-13292470)
chr6 (57-222)||(14138752-14138925)
chr6 (57-246)||(16937357-16937554)
chr6 (57-217)||(4764442-4764610)
chr6 (109-271)||(16680785-16680947)
chr6 (57-235)||(27491800-27491987)
chr6 (57-222)||(26792491-26792664)
chr6 (57-222)||(27014399-27014572)
chr6 (57-224)||(26109752-26109928)
chr6 (57-235)||(4531956-4532142)
chr6 (56-164)||(20131253-20131369)
chr6 (56-164)||(22201501-22201617)
chr6 (57-203)||(28167188-28167342)
chr6 (56-99)||(20175368-20175411)
chr6 (56-99)||(22160580-22160623)
chr6 (57-98)||(16680966-16681007)
[»] chr7 (34 HSPs)
chr7 (49-271)||(26508968-26509198)
chr7 (57-271)||(26663179-26663401)
chr7 (57-271)||(26678371-26678593)
chr7 (57-271)||(31083890-31084113)
chr7 (49-248)||(16047981-16048189)
chr7 (49-248)||(16443264-16443472)
chr7 (57-249)||(16744787-16744987)
chr7 (57-271)||(26441891-26442113)
chr7 (108-271)||(45393866-45394029)
chr7 (49-271)||(16511708-16511939)
chr7 (106-271)||(26519454-26519619)
chr7 (49-222)||(5154758-5154939)
chr7 (49-248)||(10848253-10848461)
chr7 (57-271)||(4138512-4138734)
chr7 (106-271)||(11447535-11447700)
chr7 (57-235)||(26313130-26313317)
chr7 (49-222)||(2161247-2161427)
chr7 (57-271)||(24585802-24586025)
chr7 (57-235)||(31557671-31557858)
chr7 (57-235)||(4206058-4206244)
chr7 (57-271)||(26268353-26268574)
chr7 (49-222)||(5165059-5165240)
chr7 (49-222)||(11418062-11418243)
chr7 (57-235)||(26596338-26596525)
chr7 (48-222)||(10910208-10910390)
chr7 (57-222)||(2779919-2780092)
chr7 (57-235)||(31130579-31130765)
chr7 (106-222)||(3451926-3452042)
chr7 (57-222)||(22148563-22148736)
chr7 (57-222)||(22152790-22152963)
chr7 (57-222)||(22208705-22208878)
chr7 (57-271)||(5140604-5140826)
chr7 (57-203)||(39206431-39206585)
chr7 (57-203)||(45737995-45738149)
[»] chr4 (28 HSPs)
chr4 (49-271)||(24585747-24585978)
chr4 (57-271)||(54840050-54840272)
chr4 (49-248)||(1906949-1907157)
chr4 (49-248)||(15234500-15234708)
chr4 (57-271)||(20331819-20332041)
chr4 (57-271)||(21976363-21976585)
chr4 (57-271)||(31119894-31120116)
chr4 (57-271)||(5012540-5012763)
chr4 (49-248)||(15379614-15379822)
chr4 (57-271)||(40099017-40099239)
chr4 (49-203)||(15276002-15276164)
chr4 (106-271)||(33667242-33667407)
chr4 (49-203)||(14671717-14671879)
chr4 (57-235)||(27156710-27156896)
chr4 (106-271)||(30760423-30760588)
chr4 (50-222)||(17019737-17019917)
chr4 (57-271)||(14105203-14105425)
chr4 (57-222)||(6576544-6576718)
chr4 (57-222)||(14752900-14753073)
chr4 (57-235)||(5701224-5701410)
chr4 (57-222)||(36323721-36323894)
chr4 (57-222)||(36337930-36338103)
chr4 (57-203)||(39857342-39857496)
chr4 (57-232)||(18794027-18794208)
chr4 (57-223)||(34182341-34182515)
chr4 (57-222)||(24119349-24119523)
chr4 (57-98)||(24814685-24814726)
chr4 (57-98)||(24813781-24813822)
[»] chr2 (40 HSPs)
chr2 (49-248)||(21696553-21696761)
chr2 (57-271)||(13929983-13930205)
chr2 (57-271)||(19409856-19410078)
chr2 (57-271)||(3789091-3789313)
chr2 (51-248)||(27397005-27397211)
chr2 (57-271)||(39896717-39896939)
chr2 (57-271)||(21670545-21670767)
chr2 (57-271)||(37932025-37932247)
chr2 (49-248)||(34268287-34268495)
chr2 (57-271)||(11628557-11628779)
chr2 (57-271)||(16168126-16168348)
chr2 (57-271)||(16822710-16822932)
chr2 (57-271)||(16898548-16898770)
chr2 (57-271)||(27810351-27810573)
chr2 (57-271)||(34297797-34298019)
chr2 (57-271)||(254024-254246)
chr2 (57-271)||(9343359-9343581)
chr2 (57-271)||(32056400-32056622)
chr2 (57-271)||(37679270-37679492)
chr2 (57-271)||(37694535-37694757)
chr2 (57-271)||(37945237-37945459)
chr2 (49-248)||(19449776-19449985)
chr2 (57-271)||(12593462-12593684)
chr2 (49-222)||(23117471-23117652)
chr2 (57-271)||(22921516-22921738)
chr2 (106-271)||(34868282-34868447)
chr2 (57-271)||(39045254-39045477)
chr2 (49-222)||(20844590-20844771)
chr2 (49-222)||(28888929-28889110)
chr2 (49-203)||(27427837-27428000)
chr2 (57-268)||(27782874-27783093)
chr2 (57-235)||(31882955-31883141)
chr2 (49-222)||(31868173-31868354)
chr2 (57-203)||(37384371-37384525)
chr2 (57-271)||(40240171-40240393)
chr2 (50-222)||(12662165-12662346)
chr2 (57-235)||(34161525-34161711)
chr2 (57-222)||(12709996-12710169)
chr2 (57-203)||(27123216-27123370)
chr2 (57-98)||(3790473-3790514)
[»] chr8 (25 HSPs)
chr8 (57-271)||(29835976-29836198)
chr8 (57-271)||(12086075-12086297)
chr8 (57-271)||(28355299-28355521)
chr8 (49-248)||(22074267-22074475)
chr8 (57-271)||(31483218-31483440)
chr8 (49-222)||(2130623-2130804)
chr8 (49-222)||(15774250-15774431)
chr8 (106-271)||(19681109-19681274)
chr8 (49-246)||(19694767-19694973)
chr8 (57-271)||(33265373-33265595)
chr8 (49-217)||(22139595-22139771)
chr8 (49-271)||(19654681-19654912)
chr8 (49-203)||(18797404-18797566)
chr8 (49-222)||(33249039-33249220)
chr8 (49-217)||(14569836-14570012)
chr8 (49-271)||(16260564-16260795)
chr8 (57-271)||(31361181-31361404)
chr8 (106-271)||(44567633-44567798)
chr8 (49-217)||(21341525-21341702)
chr8 (57-203)||(18716177-18716331)
chr8 (57-235)||(19201730-19201917)
chr8 (57-271)||(9361257-9361478)
chr8 (49-195)||(19910522-19910676)
chr8 (49-222)||(27602268-27602449)
chr8 (57-98)||(15775288-15775329)
[»] chr5 (51 HSPs)
chr5 (57-271)||(15752142-15752364)
chr5 (57-271)||(30036081-30036303)
chr5 (49-248)||(22895084-22895292)
chr5 (57-271)||(33523039-33523261)
chr5 (57-271)||(40466833-40467055)
chr5 (57-271)||(32589559-32589781)
chr5 (49-248)||(23898552-23898761)
chr5 (57-271)||(43084909-43085124)
chr5 (57-271)||(13318110-13318332)
chr5 (106-271)||(37761629-37761794)
chr5 (57-271)||(3796188-3796410)
chr5 (57-235)||(6880984-6881170)
chr5 (57-271)||(11330289-11330511)
chr5 (57-271)||(30175123-30175345)
chr5 (106-235)||(31819762-31819891)
chr5 (57-271)||(18494052-18494274)
chr5 (49-222)||(23726921-23727102)
chr5 (57-271)||(28655900-28656122)
chr5 (49-217)||(22992417-22992593)
chr5 (57-271)||(5644455-5644677)
chr5 (57-235)||(37351948-37352134)
chr5 (57-235)||(28953079-28953265)
chr5 (57-235)||(9324154-9324341)
chr5 (57-235)||(26487064-26487251)
chr5 (49-222)||(24608929-24609110)
chr5 (49-222)||(24976528-24976709)
chr5 (50-217)||(23632659-23632834)
chr5 (50-217)||(25206998-25207173)
chr5 (50-217)||(25271154-25271329)
chr5 (57-235)||(12138853-12139039)
chr5 (57-235)||(33881797-33881983)
chr5 (57-222)||(9544012-9544185)
chr5 (49-217)||(11556043-11556219)
chr5 (59-235)||(37745635-37745819)
chr5 (57-271)||(13435953-13436175)
chr5 (57-271)||(18368814-18369036)
chr5 (57-235)||(30158711-30158897)
chr5 (52-222)||(30941314-30941492)
chr5 (57-235)||(34623190-34623376)
chr5 (57-222)||(2517749-2517922)
chr5 (57-217)||(18121717-18121886)
chr5 (49-222)||(33299220-33299401)
chr5 (49-222)||(33784166-33784347)
chr5 (49-189)||(13180093-13180241)
chr5 (57-222)||(15652045-15652218)
chr5 (57-222)||(31438141-31438314)
chr5 (57-203)||(8658777-8658931)
chr5 (57-222)||(24730653-24730826)
chr5 (57-203)||(41681408-41681564)
chr5 (57-222)||(37664788-37664961)
chr5 (57-98)||(13178783-13178824)
[»] chr3 (60 HSPs)
chr3 (57-271)||(24334788-24335010)
chr3 (57-271)||(18231804-18232026)
chr3 (59-271)||(17978378-17978598)
chr3 (57-271)||(6536168-6536390)
chr3 (57-271)||(10649683-10649904)
chr3 (57-271)||(29658392-29658614)
chr3 (57-235)||(28109388-28109575)
chr3 (50-248)||(15367877-15368085)
chr3 (53-248)||(19701029-19701233)
chr3 (49-271)||(15886157-15886388)
chr3 (57-271)||(5020323-5020545)
chr3 (57-271)||(28345783-28346005)
chr3 (49-222)||(4728265-4728446)
chr3 (49-222)||(5658773-5658954)
chr3 (49-222)||(6208534-6208715)
chr3 (57-271)||(5589781-5590003)
chr3 (57-271)||(5602738-5602960)
chr3 (57-271)||(32297243-32297465)
chr3 (106-271)||(51788634-51788799)
chr3 (49-248)||(16617907-16618116)
chr3 (49-222)||(18057907-18058088)
chr3 (49-222)||(22381020-22381201)
chr3 (49-222)||(29142194-29142375)
chr3 (49-217)||(18337268-18337444)
chr3 (49-243)||(4690292-4690495)
chr3 (57-271)||(47030068-47030290)
chr3 (57-271)||(16404217-16404439)
chr3 (49-223)||(16422845-16423027)
chr3 (57-271)||(20570281-20570503)
chr3 (60-235)||(5717703-5717886)
chr3 (60-235)||(5728613-5728796)
chr3 (60-235)||(5763572-5763755)
chr3 (57-271)||(31957881-31958103)
chr3 (49-222)||(4790071-4790252)
chr3 (57-222)||(11103809-11103982)
chr3 (49-248)||(22041041-22041250)
chr3 (49-222)||(35887399-35887580)
chr3 (49-217)||(8282900-8283076)
chr3 (51-195)||(15734558-15734710)
chr3 (57-271)||(10402764-10402986)
chr3 (57-222)||(31029691-31029864)
chr3 (57-235)||(17970305-17970492)
chr3 (57-271)||(21681332-21681554)
chr3 (57-222)||(4340124-4340297)
chr3 (57-222)||(5473628-5473801)
chr3 (57-222)||(18285804-18285977)
chr3 (57-222)||(18301105-18301278)
chr3 (57-222)||(32445791-32445964)
chr3 (57-224)||(22864289-22864464)
chr3 (57-224)||(22879348-22879523)
chr3 (57-222)||(4423557-4423730)
chr3 (57-222)||(4630420-4630593)
chr3 (57-232)||(18249369-18249552)
chr3 (57-203)||(20072693-20072847)
chr3 (57-235)||(28027919-28028105)
chr3 (57-203)||(48472590-48472744)
chr3 (108-222)||(7079867-7079981)
chr3 (106-235)||(8218273-8218402)
chr3 (57-98)||(7080022-7080063)
chr3 (57-98)||(16599406-16599447)
[»] scaffold0038 (1 HSPs)
scaffold0038 (57-271)||(14592-14814)
[»] chr1 (15 HSPs)
chr1 (57-271)||(51644874-51645096)
chr1 (49-248)||(20333793-20334001)
chr1 (57-271)||(10951744-10951966)
chr1 (49-217)||(16201407-16201583)
chr1 (51-248)||(20467458-20467664)
chr1 (49-222)||(14692293-14692474)
chr1 (49-222)||(14694975-14695156)
chr1 (49-222)||(14697659-14697840)
chr1 (49-212)||(14700340-14700511)
chr1 (49-243)||(21891126-21891329)
chr1 (57-271)||(28591733-28591955)
chr1 (57-271)||(3647799-3648021)
chr1 (57-222)||(10969344-10969517)
chr1 (57-235)||(41786718-41786903)
chr1 (57-203)||(28156425-28156579)
[»] scaffold0109 (1 HSPs)
scaffold0109 (52-248)||(27966-28169)
[»] scaffold0093 (1 HSPs)
scaffold0093 (49-248)||(444-652)
[»] scaffold0322 (2 HSPs)
scaffold0322 (49-248)||(12722-12931)
scaffold0322 (57-271)||(2307-2529)
[»] scaffold0241 (1 HSPs)
scaffold0241 (49-248)||(25946-26154)
[»] scaffold0143 (2 HSPs)
scaffold0143 (57-271)||(10568-10791)
scaffold0143 (50-222)||(33971-34151)
[»] scaffold0159 (2 HSPs)
scaffold0159 (57-271)||(2561-2783)
scaffold0159 (147-271)||(18458-18582)
[»] scaffold0240 (1 HSPs)
scaffold0240 (52-222)||(24353-24531)
[»] scaffold0792 (1 HSPs)
scaffold0792 (49-222)||(3992-4173)
[»] scaffold0336 (1 HSPs)
scaffold0336 (106-271)||(16226-16391)
[»] scaffold0547 (1 HSPs)
scaffold0547 (49-217)||(9037-9214)
[»] scaffold0237 (1 HSPs)
scaffold0237 (57-235)||(8325-8511)
[»] scaffold0099 (1 HSPs)
scaffold0099 (107-222)||(40064-40181)
[»] scaffold0418 (1 HSPs)
scaffold0418 (57-222)||(12715-12888)
[»] scaffold0089 (1 HSPs)
scaffold0089 (156-222)||(6741-6807)


Alignment Details
Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 51 - 268
Target Start/End: Original strand, 27283707 - 27283924
Alignment:
Q  51 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcatagaaatcctctttggagataacgccgttgggagacgtaccggaacc 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27283707 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcatagaaatcctctttggagataacgccgttgggagacgtaccggaacc 27283806  T
Q  151 atggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggtac 250  Q
    ||||||||||| ||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27283807 atggctgagggtagatagctaatcaacttactggggatagaattctggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggtac 27283906  T
Q  251 gtcgtagatatcgcatct 268  Q
    ||||||||||||||||||    
T  27283907 gtcgtagatatcgcatct 27283924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 27623058 - 27623272
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcatagaaatcctctttggagataacgccgttgggagacgtaccggaaccatggct 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27623058 agacaagacattagagtattgggcacgtagtggctcgtgctacatcatagaaatcctctttggagataacgccgttgggagacgtaccagaaccatggct 27623157  T
Q  157 gagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgta 256  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  27623158 gagggtagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggtatgttgta 27623257  T
Q  257 gatatcgcatctgtg 271  Q
    |||||||||||||||    
T  27623258 gatatcgcatctgtg 27623272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 28214316 - 28214094
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  28214316 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 28214217  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||||||  |||||||||||  || |||||| ||||| |   |||||||| |||||||||||||||||||||||||||||||||    
T  28214216 ccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgttatgctgggcatttcagtgctgggt 28214117  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| ||||| ||||||||||||    
T  28214116 acgttgtagacatcgcatctgtg 28214094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 30551331 - 30551553
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||| ||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  30551331 agacaagatatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 30551430  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||    
T  30551431 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggt 30551530  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  30551531 atgttgtagacattgcatctgtg 30551553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 34457837 - 34458059
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||| ||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  34457837 agacaagacattagagtattgggcacatagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 34457936  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| |||||| |||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  34457937 ccatagctgagggcaggtagatatgcaacttgctggagatagagtcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 34458036  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| ||||||||||||    
T  34458037 atgttgtagacatcgcatctgtg 34458059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 27064349 - 27064127
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| | |||    
T  27064349 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 27064250  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||||||||||||  |  ||  | ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  27064249 ccatggctgagggcaggcaagtatgcgacttgctggagatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagcgctgggt 27064150  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | ||  |||| || |||||||||    
T  27064149 atgttatagacattgcatctgtg 27064127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 26927608 - 26927427
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||||||||||||||||||||    
T  26927608 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagataacgccgttgggagacg 26927509  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || |||||||| ||||||||  |||||||||||||||| |||||||||||||||| || |||| | |||||| |||| ||||    
T  26927508 tatcggaaccaaggctgaggatagatagctaatcaactcgctggggatagaatctcgggagactctactgggaataatgccg 26927427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 27209755 - 27209574
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacat--catag------aaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||       ||||||||||||||||||||| ||||||||||||    
T  27209755 gcagagatagacaagacattggagtattgggcacgtagtggctcgtgctagattacatattccagtaaatcctctttggagataacgtcgttgggagacg 27209656  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  27209655 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 27209574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 27239473 - 27239654
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacat--catag------aaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||       ||||||||||||||||||||| ||||||||||||    
T  27239473 gcagagatagacaagacattggagtattgggcacgtagtggctcgtgctagattacatattccagtaaatcctctttggagataacgtcgttgggagacg 27239572  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  27239573 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 27239654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 29579882 - 29579660
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||| ||||||| || | |        |||||||||| ||||||| ||| |||||||||||||| |||||    
T  29579882 agacaagacattagagtattgggcacgtagtggcccgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaa 29579783  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||| | ||| |   ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  29579782 ccatggccgagggccggtaggtgtgcaacttgctggagatagaatcttggaagacctgactggggagaatgccgttgtgctgggcatttcagtgctgggt 29579683  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  29579682 atgttgtagacattgcatctgtg 29579660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 16756677 - 16756496
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  16756677 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 16756578  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |  ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  16756577 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 16756496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 22928198 - 22928406
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        |||||||||||||||||||||  |||||||||| |    
T  22928198 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacatcgttgggagatg 22928297  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt-tatgctgggcatttca 239  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | ||| ||||||| |||||   ||| ||||||||||    
T  22928298 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactagggataatgccgtcgttgccgggcatttca 22928397  T
Q  240 gtgctgggt 248  Q
    |||| ||||    
T  22928398 gtgccgggt 22928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 49 - 203
Target Start/End: Complemental strand, 24870564 - 24870402
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  24870564 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 24870465  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  24870464 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 24870402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 26665988 - 26666210
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  26665988 agacaagacattagagtattgggcacgtagtggctcgtgctatatgacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 26666087  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||  |||||||||  |  || ||  ||||||||||| ||||||||||||||||||   |||||||| ||||||||| |||||||||||||||||||||||    
T  26666088 cctaggctgagggtgggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggt 26666187  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| ||||| || |||||||||    
T  26666188 acgttgtagacattgcatctgtg 26666210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 26771959 - 26772181
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  26771959 agacaagacattagagtattgggcacgtagtggctcgtgctatatgacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 26772058  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||  |||||||||  |  || ||  ||||||||||| ||||||||||||||||||   |||||||| ||||||||| |||||||||||||||||||||||    
T  26772059 cctaggctgagggtgggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggt 26772158  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| ||||| || |||||||||    
T  26772159 acgttgtagacattgcatctgtg 26772181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 27355434 - 27355656
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||| ||||||| ||| ||||||| |||||| ||||     
T  27355434 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggggacgtatcggag 27355533  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||| |||||||||||| ||| ||  ||||||||||||||||||||||||  |||||  || ||||| ||||||||| |||||||||| ||||||||||||    
T  27355534 ccaaggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagacctcaccggggaaaacgccgttgtgctgggcatctcagtgctgggt 27355633  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| ||||| || |||||||||    
T  27355634 acgttgtagacattgcatctgtg 27355656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 24299105 - 24299285
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgt 141  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||    
T  24299105 cagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgt 24299204  T
Q  142 accggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    | ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  24299205 atcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24299285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 4539110 - 4539296
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  4539110 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 4539209  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| |  ||||   ||||||||||| |||||| ||||||||||    
T  4539210 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgagagactttactggggataatgccgttgtgctgggcat 4539296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 49 - 195
Target Start/End: Original strand, 15405874 - 15406028
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | | |        |||||||||||||||| ||| ||||||||||||    
T  15405874 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacg 15405973  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 195  Q
    || ||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  15405974 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 15406028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 49 - 195
Target Start/End: Original strand, 15417661 - 15417815
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | | |        |||||||||||||||| ||| ||||||||||||    
T  15417661 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacg 15417760  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 195  Q
    || ||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  15417761 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 15417815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 33369781 - 33369954
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  33369781 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 33369880  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  33369881 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 33369954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 4779702 - 4779537
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||||||||||||| ||| |||||||||||||  ||| |||  ||||||||||||  || ||  ||||||||||| ||||||||||||||||||      
T  4779702 gaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactt 4779603  T
Q  206 gactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
     |||||||| ||||||||| |||||||||||||||||||| |||||| ||||| || |||||||||    
T  4779602 tactggggaaaacgccgttgtgctgggcatttcagtgctgagtacgttgtagacattgcatctgtg 4779537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 13517545 - 13517731
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    ||||||||| || ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||| |    
T  13517545 agacaagacgttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggga 13517644  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||  |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||||    
T  13517645 cctaggctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 13517731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 27201045 - 27200859
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  |||||||||||||||||||||||| |||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  27201045 agacaagacatcagagtattgggcacgtagtggctcgagctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 27200946  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||  ||||   |||||||| ||| ||||| ||||||||||    
T  27200945 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgagagactttactggggaaaacaccgttgtgctgggcat 27200859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 27248188 - 27248374
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  |||||||||||||||||||||||| |||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  27248188 agacaagacatcagagtattgggcacgtagtggctcgagctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 27248287  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||  ||||   |||||||| ||| ||||| ||||||||||    
T  27248288 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgagagactttactggggaaaacaccgttgtgctgggcat 27248374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 29508269 - 29508096
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  29508269 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 29508170  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||   ||||||||||||||||||||| ||||||| | |||||| |||||||||    
T  29508169 ccatggctgagggcaggtaggtatgtaacttgctggggatagaatctcggaagactctactgggaataacgccg 29508096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 29556404 - 29556231
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||| |||| |||| |||||||||||||||||| |||||    
T  29556404 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctttttgaagatgacgccgttgggagacgtatcggaa 29556305  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    ||||||||||||||||||||  |  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  29556304 ccatggctgagggcagataggcatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 29556231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 49 - 217
Target Start/End: Complemental strand, 27025998 - 27025822
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | | |        |||||||||||||||| ||| ||||||||||||    
T  27025998 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacg 27025899  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    || ||| |||| |||||||||| | ||| ||  ||||||||||||||||||||||||| |||| | |||||| ||||    
T  27025898 tatcgggaccaaggctgagggccggtagttatgcaacttgctggggatagaatcttgggagactctactgggaataa 27025822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 49 - 217
Target Start/End: Complemental strand, 27031877 - 27031701
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  27031877 gcagagacagacaagacactggagcattgggcacgtaatggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 27031778  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    || ||||||||||||||||||||| ||| ||  ||||||||||||||||| |||| ||||||| | |||||| ||||    
T  27031777 tatcggaaccatggctgagggcaggtagttatgcaacttgctggggataggatctcggaagactctactgggaataa 27031701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 8899028 - 8899250
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||  | | |        || ||||||| ||||||| ||| |||||||||||||| |||||    
T  8899028 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 8899127  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||| | ||| ||   ||||||||||||||||| |||||  |||| | || ||||| |||||| || || ||||||||||||||||||||    
T  8899128 ccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccattgtgttgggcatttcagtgctgggt 8899227  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| ||||| || |||||||||    
T  8899228 acgttgtagacattgcatctgtg 8899250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 13292288 - 13292470
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |        || | |||||||||||||||||| ||| ||||||| ||||    
T  13292288 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggggacg 13292387  T
Q  141 taccggaaccatggctgagggcagatag-ctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| |||| |||||||||| | ||| |||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  13292388 tatcgggaccaaggctgagggccggtagtctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 13292470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 14138752 - 14138925
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  14138752 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 14138851  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  ||||| |||||||||||||||| ||||||| | |||||| |||| ||||    
T  14138852 ccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctactgggaataatgccg 14138925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 246
Target Start/End: Original strand, 16937357 - 16937554
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        || || |||| ||||||| ||| |||||||||||||| |||||    
T  16937357 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagattctctatggagatgacgtcgttgggagacgtatcggaa 16937456  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgg 246  Q
    ||||||| |||||| | ||| ||    |||||||||||||||| |||||  |||| | |||||||| ||||||||| |||||||||||||||||||||    
T  16937457 ccatggccgagggccggtaggtatgtgacttgctggggatagagtcttgagagactccactggggaaaacgccgttgtgctgggcatttcagtgctgg 16937554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 4764610 - 4764442
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||||  ||||    
T  4764610 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 4764511  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||  ||||   |||||||||||    
T  4764510 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttactggggataa 4764442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 109 - 271
Target Start/End: Complemental strand, 16680947 - 16680785
Alignment:
Q  109 atcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgac 208  Q
    ||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||   ||||||||||||||||| |||||  |||| | ||    
T  16680947 atcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccac 16680848  T
Q  209 tggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
     ||||| ||||||||| |||||||||||||| ||||||||| || ||||| || |||||||||    
T  16680847 cggggaaaacgccgttgtgctgggcatttcaatgctgggtatgttgtagacattgcatctgtg 16680785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 27491987 - 27491800
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  |||||||||||||||||| |||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  27491987 agacaagacatcagagtattgggcacgtagtagctcgtgctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 27491888  T
Q  149 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| ||| ||| |||||||| ||||||||||||||||  |||||  || ||||| ||||||||| ||||||||||    
T  27491887 ccatggctgagggcaggtaggtaaacaacttgcttggggatagaatcttgagagacctcaccggggaaaacgccgttgtgctgggcat 27491800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 26792664 - 26792491
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||  ||| ||||||||||||||  ||||    
T  26792664 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagacgacgtcgttgggagacgtattggaa 26792565  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||  ||||   ||||||||||| ||||    
T  26792564 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttactggggataatgccg 26792491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 27014572 - 27014399
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||||  ||||    
T  27014572 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 27014473  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  | ||| |||||||||||||||| ||||||| | |||||| |||| ||||    
T  27014472 ccatggctgagggcaggtaggtatgcgactcgctggggatagaatctcggaagactctactgggaataatgccg 27014399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 26109752 - 26109928
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta--------catcatagaaatcctctttggagataacgccgtt-gggagacgtaccgga 147  Q
    |||| ||||||  |||||||||||||||||||||||||||||        | || | |||||||||||||||||| ||| |||| |||||||||| ||||    
T  26109752 agacgagacatcagagtattgggcacgtagtggctcgtgctatgttacaccttcttggaaatcctctttggagatgacgtcgtttgggagacgtatcgga 26109851  T
Q  148 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 224  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| |  ||||   ||||||||||| ||||||    
T  26109852 accatggctgagggcaggtagctatgcaacttgctggggatagaatctcgagagactttactggggataatgccgtt 26109928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 4532142 - 4531956
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  |||||||||||||||||||||||| |||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  4532142 agacaagacatcagagtattgggcacgtagtggctcgagctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 4532043  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||  |||||||||| | ||||||  ||||||||||||||||||||||||  ||||   ||||||||||| |||||| ||||||||||    
T  4532042 cctaggctgagggctggtagctatgcaacttgctggggatagaatcttgagagactttactggggataatgccgttgtgctgggcat 4531956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 20131369 - 20131253
Alignment:
Q  56 cagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccgga 147  Q
    |||||||||||| ||||| |||||||||||||||||||||||| |||| |        ||||||||||||||||||| || |||||||||||||| || |    
T  20131369 cagacaagacatcggagtgttgggcacgtagtggctcgtgctatatcacacattcctggaaatcctctttggagatatcgtcgttgggagacgtatcgaa 20131270  T
Q  148 accatggctgagggcag 164  Q
    |||||||||||||||||    
T  20131269 accatggctgagggcag 20131253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 22201501 - 22201617
Alignment:
Q  56 cagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccgga 147  Q
    |||||||||||| ||||| |||||||||||||||||||||||| |||| |        ||||||||||||||||||| || |||||||||||||| || |    
T  22201501 cagacaagacatcggagtgttgggcacgtagtggctcgtgctatatcacacattcctggaaatcctctttggagatatcgtcgttgggagacgtatcgaa 22201600  T
Q  148 accatggctgagggcag 164  Q
    |||||||||||||||||    
T  22201601 accatggctgagggcag 22201617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 28167342 - 28167188
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  28167342 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 28167243  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    ||  |||||||||| | ||||||  |||||||||||||||||| |||||| ||||    
T  28167242 cctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagac 28167188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 20175411 - 20175368
Alignment:
Q  56 cagacaagacattggagtattgggcacgtagtggctcgtgctac 99  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||    
T  20175411 cagacgagacatcggagtattgagcacgtagtggctcgtgctac 20175368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 22160580 - 22160623
Alignment:
Q  56 cagacaagacattggagtattgggcacgtagtggctcgtgctac 99  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||    
T  22160580 cagacgagacatcggagtattgagcacgtagtggctcgtgctac 22160623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 16681007 - 16680966
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||  ||||||||||||| |||||||||||||||    
T  16681007 agacaagacatcagagtattgggcacatagtggctcgtgcta 16680966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 170; Significance: 3e-91; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 49 - 271
Target Start/End: Original strand, 26508968 - 26509198
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |        |||||||||||||||||||||| ||||||||||||    
T  26508968 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctggaaatcctctttggagataacgtcgttgggagacg 26509067  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcag 240  Q
    || ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26509068 tatcggaaccatggctgagggcaggtagctaatcaacttgctgggggtagaatcttggaagacccgactggggataacgccgttatgctgggcatttcag 26509167  T
Q  241 tgctgggtacgtcgtagatatcgcatctgtg 271  Q
    ||||||||| || ||||||||||||||||||    
T  26509168 tgctgggtatgttgtagatatcgcatctgtg 26509198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 26663179 - 26663401
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  26663179 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 26663278  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  26663279 ccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 26663378  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  26663379 atgttgtagacattgcatctgtg 26663401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 26678371 - 26678593
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  26678371 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 26678470  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  26678471 ccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 26678570  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  26678571 atgttgtagacattgcatctgtg 26678593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 31083890 - 31084113
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  31083890 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 31083989  T
Q  149 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctggg 247  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||||||||  |||| | || ||||| ||||||||| |||||||||| |||| ||||||    
T  31083990 ccatggctgagggcaggtagctaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcatgtcagcgctggg 31084089  T
Q  248 tacgtcgtagatatcgcatctgtg 271  Q
    || |||||||||||||||||||||    
T  31084090 tatgtcgtagatatcgcatctgtg 31084113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 49 - 248
Target Start/End: Complemental strand, 16048189 - 16047981
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||||| | ||||||||||||    
T  16048189 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataaagtcgttgggagacg 16048090  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttca 239  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |   ||||||||| ||||| || |||||||||||||    
T  16048089 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgttggggataatgccgtcatcgctgggcatttca 16047990  T
Q  240 gtgctgggt 248  Q
    ||| |||||    
T  16047989 gtgttgggt 16047981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 16443264 - 16443472
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| || | |        |||||||||||||||||||||| ||||||||||||    
T  16443264 gcagagacagacaagacattgaagtattgggcatgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 16443363  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || |||| |||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |  |||||||||| ||||| | ||||||||||||||    
T  16443364 tatcggagccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgctggggataatgccgtcattgctgggcatttca 16443463  T
Q  240 gtgctgggt 248  Q
    |||||||||    
T  16443464 gtgctgggt 16443472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 57 - 249
Target Start/End: Original strand, 16744787 - 16744987
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  16744787 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgacggaa 16744886  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||||||||| |||||||    
T  16744887 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagcgctgggt 16744986  T
Q  249 a 249  Q
    |    
T  16744987 a 16744987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 26442113 - 26441891
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||| ||||||| ||| |||||||||||||| |||||    
T  26442113 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaa 26442014  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||| | ||| ||  ||||||||||||||||||||||||  |||||| || ||||| ||||||||| |||||||||||||||| ||||||    
T  26442013 ccatggccgagggccggtaggtatgcaacttgctggggatagaatcttgagagaccccaccggggaaaacgccgttgtgctgggcatttcagtactgggt 26441914  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  26441913 atgttgtagacattgcatctgtg 26441891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 45394029 - 45393866
Alignment:
Q  108 aatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccga 207  Q
    |||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||   |    
T  45394029 aatcctctttggagatgacgtcgttgagagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagacttta 45393930  T
Q  208 ctggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
    ||||||| ||||||||| |||||||||||||||| ||||||| || ||| | ||||||||||||    
T  45393929 ctggggaaaacgccgttgtgctgggcatttcagtcctgggtaagttgtaaacatcgcatctgtg 45393866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 49 - 271
Target Start/End: Original strand, 16511708 - 16511939
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| || ||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  16511708 gcagagacagacaagacactggagtattgggcacgtaatgactcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 16511807  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||| | ||| ||||||||||    
T  16511808 tatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctactgggaataatgccgtcattgccgggcatttca 16511907  T
Q  240 gtgctgggtacgtcgtagatatcgcatctgtg 271  Q
    ||||||| |   |||| ||| |||||||||||    
T  16511908 gtgctggatgtatcgtggatgtcgcatctgtg 16511939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 26519619 - 26519454
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||      
T  26519619 gaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactt 26519520  T
Q  206 gactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
     |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  26519519 tactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 26519454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 5154939 - 5154758
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  5154939 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 5154840  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |  ||||||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  5154839 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 5154758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 49 - 248
Target Start/End: Complemental strand, 10848461 - 10848253
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |        |||||||||||||||||||||| | ||||||||||    
T  10848461 gcagagacagacaagacattggagtattgggcacgtagtggctcgcgctatatcacacattcttggaaatcctctttggagataacgtcattgggagacg 10848362  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttca 239  Q
    || ||||||||||||||||||| | | ||||  | |||||||||||| ||||||| ||||||| |  |||| ||||| ||||| || |||||||||||||    
T  10848361 tatcggaaccatggctgagggcgggttgctacgcgacttgctggggacagaatctcggaagactctgctggagataatgccgtcatcgctgggcatttca 10848262  T
Q  240 gtgctgggt 248  Q
    ||| |||||    
T  10848261 gtgttgggt 10848253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 4138512 - 4138734
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  4138512 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 4138611  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| |||||||||||  || ||  ||||||||||| ||||||||||||  || | | |||||||| ||||||||| |||||||||||||||| ||||||    
T  4138612 ccatagctgagggcaggcaggtatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtactgggt 4138711  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||| | ||||||||||||    
T  4138712 aagttgtaaacatcgcatctgtg 4138734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 11447700 - 11447535
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||      
T  11447700 gaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactt 11447601  T
Q  206 gactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
     |||||||| ||||||||| |||||||||||||||||| |||||||| ||||| || |||||||||    
T  11447600 tactggggaaaacgccgttgtgctgggcatttcagtgccgggtacgttgtagacattgcatctgtg 11447535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 26313130 - 26313317
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  26313130 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 26313229  T
Q  149 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||| ||||||||| ||||||||||    
T  26313230 ccatggctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 26313317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 2161427 - 2161247
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||  ||| ||||||||||||    
T  2161427 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagacgacgtcgttgggagacg 2161328  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |  ||||||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  2161327 tgtcggaaccatggctgagggcag-tagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 2161247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 24585802 - 24586025
Alignment:
Q  57 agacaagacattg-gagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccgga 147  Q
    ||||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||||    
T  24585802 agacaagacatttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcgga 24585901  T
Q  148 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctggg 247  Q
    ||||| ||||| ||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| ||||||||| |||||||||||||||| |||||    
T  24585902 accatagctgaaggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtactggg 24586001  T
Q  248 tacgtcgtagatatcgcatctgtg 271  Q
    || || ||| | ||||||||||||    
T  24586002 taagttgtaaacatcgcatctgtg 24586025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 31557671 - 31557858
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  |||||||||||||||||| |||||||||| || | |        ||||||||||||||||||  || |||||||||||||| |||||    
T  31557671 agacaagacatcagagtattgggcacgtagtagctcgtgctatattacaccttcttggaaatcctctttggagatggcgtcgttgggagacgtatcggaa 31557770  T
Q  149 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||   |||||||| ||||||||| ||||||||||    
T  31557771 ccatggctgagggcaggtaggtaaacaacttgcttggggatagaatcttggaagactttactggggaaaacgccgttgtgctgggcat 31557858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 4206244 - 4206058
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| |||| |||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||| ||||||    
T  4206244 agacaagacattagagtgttgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtgccggaa 4206145  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||||||| |||||||| ||| ||  ||||||||||||||||||||||||  |||| | || ||||| ||||||||| ||||||||||    
T  4206144 ccatggccgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 4206058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 26268353 - 26268574
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||||     
T  26268353 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggac 26268452  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    | | ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||| ||||||||| |||||||||||||||| ||||||    
T  26268453 cta-ggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtactgggt 26268551  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  26268552 atgttgtagacattgcatctgtg 26268574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 5165240 - 5165059
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  5165240 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 5165141  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| |||  |||||||||| | ||||||  |||||||||||||||||| |||||| |||| | ||| ||||||| ||||    
T  5165140 tatcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactagggataatgccg 5165059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 11418062 - 11418243
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatca--------tagaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| || |        | |||||||||||||||||| ||| ||||||||||||    
T  11418062 gcagagacagacaagacattagagtattgggcacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacg 11418161  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| |||  |||||||||| | ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  11418162 tatcgggacctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 11418243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 26596525 - 26596338
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||| ||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  26596525 agacaagacattagagtattgggcacgtagtggctcatgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 26596426  T
Q  149 cca-tggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||| | ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||||    
T  26596425 ccaatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 26596338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 48 - 222
Target Start/End: Original strand, 10910208 - 10910390
Alignment:
Q  48 agcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagac 139  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        |||||||||||||||||| |||  ||||||||||    
T  10910208 agcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgttgttgggagac 10910307  T
Q  140 gtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    ||| ||| ||||||||||||||||| ||||||  |||||||||| ||||||||||| || |||| | |||||| |||| ||||    
T  10910308 gtatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactctactgggaataatgccg 10910390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 2780092 - 2779919
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||||||||||||| |||| |||||||||||||||||| |||||    
T  2780092 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttgaagatgacgccgttgggagacgtatcggaa 2779993  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| |||  |  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  2779992 ccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 2779919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 31130765 - 31130579
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||||  ||||    
T  31130765 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 31130666  T
Q  149 cca-tggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||| ||||||||||||| ||||||  ||||||||||||||||||||||||  ||||   |||||||| || |||||| ||||||||||    
T  31130665 ccaatggctgagggcaggtagctatgcaacttgctggggatagaatcttgagagactttactgggga-aatgccgttgtgctgggcat 31130579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 3452042 - 3451926
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||| ||| ||  |||||||||||||||||||||| ||||||| |    
T  3452042 gaaatcctctttggagatgacgtcgttgggagacgtaccggagccaaggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactc 3451943  T
Q  206 gactggggataacgccg 222  Q
     |||||| |||| ||||    
T  3451942 tactgggaataatgccg 3451926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 22148736 - 22148563
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  22148736 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 22148637  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||| |||  |  ||||| ||||||||||| |||| ||||||| | |||||| |||| ||||    
T  22148636 ccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctactgggaataatgccg 22148563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 22152963 - 22152790
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  22152963 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 22152864  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||| |||  |  ||||| ||||||||||| |||| ||||||| | |||||| |||| ||||    
T  22152863 ccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctactgggaataatgccg 22152790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 22208878 - 22208705
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  22208878 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 22208779  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||| |||  |  ||||| ||||||||||| |||| ||||||| | |||||| |||| ||||    
T  22208778 ccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctactgggaataatgccg 22208705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 5140604 - 5140826
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||  | | |        || ||||||| ||||||| ||| | |||||||||||| |||||    
T  5140604 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcattgggagacgtatcggaa 5140703  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||| | ||| ||   ||||||||||||||| | |||||  |||| | |  ||||| ||||||||| |||||||||||||| ||||||||    
T  5140704 ccatggccgagggccggtaggtatgtaacttgctggggataaagtcttgagagactccaacggggaaaacgccgttgtgctgggcatttcaatgctgggt 5140803  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  5140804 atgttgtagacattgcatctgtg 5140826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 39206431 - 39206585
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  39206431 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 39206530  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    ||  |||||||||| | ||||||  |||||||||| |||||||||||||| ||||    
T  39206531 cctaggctgagggccggtagctatgcaacttgctgaggatagaatcttgggagac 39206585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 45738149 - 45737995
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  45738149 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 45738050  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    ||  |||||||||| | ||||||  ||| ||||||||||||||||||||| ||||    
T  45738049 cctaggctgagggccggtagctatgcaatttgctggggatagaatcttgggagac 45737995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 7e-61; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 49 - 271
Target Start/End: Original strand, 24585747 - 24585978
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  24585747 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 24585846  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || ||| ||||||||||||||||||||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||| | ||| ||||||||||    
T  24585847 tatcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccgtcattgccgggcatttca 24585946  T
Q  240 gtgctgggtacgtcgtagatatcgcatctgtg 271  Q
    |||||||||| || ||||||||||||||||||    
T  24585947 gtgctgggtatgttgtagatatcgcatctgtg 24585978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 54840272 - 54840050
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    ||||||||||||||| |||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  54840272 agacaagacattggattattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 54840173  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  54840172 ccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagcgctgggt 54840073  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  54840072 atgttgtagacattgcatctgtg 54840050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 248
Target Start/End: Complemental strand, 1907157 - 1906949
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||||||| | ||||||||||    
T  1907157 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcattgggagacg 1907058  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || |||||||||| |||||||||| ||||||  |||||||||||||||||||||| ||||| | | ||||||||||| ||||| | ||||||||||||||    
T  1907057 tatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactggggataatgccgtcattgctgggcatttca 1906958  T
Q  240 gtgctgggt 248  Q
    |||||||||    
T  1906957 gtgctgggt 1906949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 248
Target Start/End: Complemental strand, 15234708 - 15234500
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||||||| ||||||||||||    
T  15234708 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 15234609  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttca 239  Q
    || |||||||||| |||||||||| ||||||  |||||||||||||||||||||| ||||||| |  |||||||||| ||||| || ||||||||||| |    
T  15234608 tatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgctggggataatgccgtcatcgctgggcatttta 15234509  T
Q  240 gtgctgggt 248  Q
    |||||||||    
T  15234508 gtgctgggt 15234500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 20331819 - 20332041
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  20331819 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 20331918  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  20331919 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 20332018  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  20332019 atgttgtagacattgcatctgtg 20332041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 21976585 - 21976363
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||| ||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  21976585 agacaagatatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 21976486  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||    
T  21976485 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggt 21976386  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  21976385 atgttgtagacattgcatctgtg 21976363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 31119894 - 31120116
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  31119894 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 31119993  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||    
T  31119994 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggt 31120093  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||| | || |||||||||    
T  31120094 atgttgtaaacattgcatctgtg 31120116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 5012763 - 5012540
Alignment:
Q  57 agacaagacattggagtattggg-cacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccgga 147  Q
    |||||||||||| |||| ||||| ||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||||    
T  5012763 agacaagacattagagtgttggggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcgga 5012664  T
Q  148 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctggg 247  Q
    |||| |||||||||||| ||| ||  ||||||||||||||||||||||||  ||||||||||||||||||| || || |||||||||| |||| ||||||    
T  5012663 accacggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagacccgactggggataacaccattgtgctgggcatgtcagcgctggg 5012564  T
Q  248 tacgtcgtagatatcgcatctgtg 271  Q
    || |||||||||||||||||||||    
T  5012563 tatgtcgtagatatcgcatctgtg 5012540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 15379614 - 15379822
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |        ||||||||||||||| |||||| ||||||||||||    
T  15379614 gcagagacagacaagacattggaatattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggatataacgtcgttgggagacg 15379713  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttca 239  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |  |||| ||||| ||||| || ||||||||||| |    
T  15379714 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgctggagataatgccgtcatcgctgggcatttta 15379813  T
Q  240 gtgctgggt 248  Q
    ||| |||||    
T  15379814 gtgttgggt 15379822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 40099017 - 40099239
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  40099017 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 40099116  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| ||||||||| |||||||||||||||||||||||    
T  40099117 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgggt 40099216  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  40099217 atgttgtagacattgcatctgtg 40099239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 49 - 203
Target Start/End: Original strand, 15276002 - 15276164
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |        ||||||||||||||||||||||  |||||||||||    
T  15276002 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggagataacgttgttgggagacg 15276101  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    || ||||||||||||||||||||| ||||||  | |||||||||||| ||||||| |||||||    
T  15276102 tatcggaaccatggctgagggcaggtagctatgcgacttgctggggacagaatctcggaagac 15276164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 33667242 - 33667407
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||      
T  33667242 gaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactt 33667341  T
Q  206 gactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
     |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  33667342 tactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 33667407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 49 - 203
Target Start/End: Complemental strand, 14671879 - 14671717
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  14671879 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 14671780  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  14671779 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 14671717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 27156710 - 27156896
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  27156710 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 27156809  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||||    
T  27156810 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 27156896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 30760588 - 30760423
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||| ||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||      
T  30760588 gaaatcctttttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactt 30760489  T
Q  206 gactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
     |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  30760488 tactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 30760423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 222
Target Start/End: Complemental strand, 17019917 - 17019737
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgt 141  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||    
T  17019917 cagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgt 17019818  T
Q  142 accggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    | ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  17019817 atcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 17019737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 14105425 - 14105203
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        || ||||||| ||||||| ||| |||||||||||||| |||||    
T  14105425 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 14105326  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||  | ||| ||   ||||||||||||||||| |||||  |||| | |||||||| ||||||||| ||||||||||||||||||||| |    
T  14105325 ccatggccgagggtcggtaggtatgtaacttgctggggatagagtcttgagagactccactggggaaaacgccgttgtgctgggcatttcagtgctggat 14105226  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  14105225 atgttgtagacattgcatctgtg 14105203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 6576718 - 6576544
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctcttt-ggagataacgccgttgggagacgtaccgga 147  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||| |||||| ||| |||||||||||||| ||||    
T  6576718 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctcttttggagatgacgtcgttgggagacgtatcgga 6576619  T
Q  148 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    ||||||||||||||||| ||  ||  |||||||||||||||||||||| ||||||| | ||||||||||| ||||    
T  6576618 accatggctgagggcaggtaagtatgcaacttgctggggatagaatctcggaagactccactggggataatgccg 6576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 14752900 - 14753073
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||| ||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  14752900 agacgagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 14752999  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  14753000 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 14753073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 5701410 - 5701224
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| | |||    
T  5701410 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 5701311  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||| |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||   || ||||| || |||||| ||||||||||    
T  5701310 ccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagactttaccggggacaatgccgttgtgctgggcat 5701224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 36323721 - 36323894
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |        ||||||||| |||||||| ||| |||||||||||||| |||||    
T  36323721 agacaagacattagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctccttggagatgacgtcgttgggagacgtatcggaa 36323820  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| |||  |  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  36323821 ccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 36323894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 36337930 - 36338103
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |        ||||||||| |||||||| ||| |||||||||||||| |||||    
T  36337930 agacaagacattagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctccttggagatgacgtcgttgggagacgtatcggaa 36338029  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| |||  |  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  36338030 ccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 36338103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 39857496 - 39857342
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| || ||| ||||||| ||| |||||||||||||| |||||    
T  39857496 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaattcttctgtggagatgacgtcgttgggagacgtatcggaa 39857397  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| |||||||    
T  39857396 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagac 39857342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 18794027 - 18794208
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  18794027 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18794126  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctggg 232  Q
    ||||||| |||||| | ||| ||   ||||||||||||||||| |||||  |||| | || ||||| ||||||||| |||||||    
T  18794127 ccatggccgagggccggtaggtatgtaacttgctggggatagagtcttg--agactccaccggggaaaacgccgttgtgctggg 18794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 223
Target Start/End: Original strand, 34182341 - 34182515
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||| ||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  34182341 agacaagacattagagtattgggcacatagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggga 34182440  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 223  Q
    ||  |||||||||| | ||||||  |||||||||||||||||| |||||| |||| | |||||| |||| |||||    
T  34182441 cctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactgggaataatgccgt 34182515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 24119523 - 24119349
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcataga---------aatcctctttggagataacgccgttgggagacgtaccgga 147  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | | |         |||||||||||||||| ||  |||||||||||||| |||     
T  24119523 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggaaaatcctctttggagatgacatcgttgggagacgtatcggg 24119424  T
Q  148 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||| ||||||||||   ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  24119423 accaaggctgagggccagtagatatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24119349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 24814685 - 24814726
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  24814685 agacaagacattagagtattgggcacgtagtggctcgtgcta 24814726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 24813781 - 24813822
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  24813781 agacaagacattagagtattgggcacgtggtggctcgtgcta 24813822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 7e-61; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 21696553 - 21696761
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgc-----taca---tcatagaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||     ||||   || | |||||||||||||||||||||||||||||||||||    
T  21696553 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgcaatattacacattcctggaaatcctctttggagataacgccgttgggagacg 21696652  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||| | | ||||||||||| ||||| | ||||||||||||||    
T  21696653 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactggggataatgccgtcattgctgggcatttca 21696752  T
Q  240 gtgctgggt 248  Q
    |||||||||    
T  21696753 gtgctgggt 21696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 13929983 - 13930205
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  13929983 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 13930082  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||| ||||| ||||||||| ||||||||| ||||||||||||||||| |||||    
T  13930083 ccatggctgagggcaggtagctaaacaacttgctggagatagaatcttgggagacctgactggggagaacgccgttgtgctgggcatttcagtgttgggt 13930182  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  13930183 atgttgtagacattgcatctgtg 13930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 19409856 - 19410078
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||| ||| ||| |||||||||||||| |||||    
T  19409856 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaa 19409955  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||||||  || ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  19409956 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagaccccactggggaaaacgccgttgtgctgggcatttcagtgctgggt 19410055  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  19410056 atgttgtagacattgcatctgtg 19410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 3789313 - 3789091
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  3789313 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 3789214  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  3789213 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagcgctgggt 3789114  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  3789113 atgttgtagacattgcatctgtg 3789091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 51 - 248
Target Start/End: Complemental strand, 27397211 - 27397005
Alignment:
Q  51 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgta 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |        |||||||||||||||||||||| ||||||||||||||    
T  27397211 agagacagacaagacattggagtattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggagataacgtcgttgggagacgta 27397112  T
Q  143 ccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttcagt 241  Q
     ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |  |||||||||| ||||| || |||||||||||||||    
T  27397111 tcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactccgctggggataatgccgtcatcgctgggcatttcagt 27397012  T
Q  242 gctgggt 248  Q
    | |||||    
T  27397011 gttgggt 27397005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 39896939 - 39896717
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  || |||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  39896939 agacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 39896840  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||   |||||||| ||||||||| |||||||||||||||||||||||    
T  39896839 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggt 39896740  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| || |||||||||||||||    
T  39896739 acgttgtggatatcgcatctgtg 39896717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 21670545 - 21670767
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  21670545 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 21670644  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  21670645 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaacgccgttgtgctgggcatttcagtgctgggt 21670744  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  21670745 atgttgtagacattgcatctgtg 21670767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 37932247 - 37932025
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||| ||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  37932247 agacaagacatcagagcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 37932148  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  37932147 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagcgctgggt 37932048  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  37932047 atgttgtagacattgcatctgtg 37932025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 34268287 - 34268495
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       ||| | | |||||||||||||||||||||| ||||||||||||    
T  34268287 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatgttacacattcctggaaatcctctttggagataacgtcgttgggagacg 34268386  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | ||||||||||| || || | ||| | ||||||||    
T  34268387 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactggggataatgctgtcattgccgagcatttca 34268486  T
Q  240 gtgctgggt 248  Q
    |||||||||    
T  34268487 gtgctgggt 34268495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 11628557 - 11628779
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  11628557 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 11628656  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||  |||| | || ||||| ||||||||| |||| ||||||||||||||||||    
T  11628657 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgttgtgctaggcatttcagtgctgggt 11628756  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | |||||||| || |||||||||    
T  11628757 aagtcgtagacattgcatctgtg 11628779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 16168348 - 16168126
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  16168348 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 16168249  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  16168248 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 16168149  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  16168148 atgttgtagacattgcatctgtg 16168126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 16822710 - 16822932
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  16822710 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 16822809  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||    
T  16822810 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggt 16822909  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  16822910 atgttgtagacattgcatctgtg 16822932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 16898770 - 16898548
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  16898770 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 16898671  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||    
T  16898670 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggt 16898571  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  16898570 atgttgtagacattgcatctgtg 16898548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 27810573 - 27810351
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  27810573 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 27810474  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  27810473 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 27810374  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  27810373 atgttgtagacattgcatctgtg 27810351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 34298019 - 34297797
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  34298019 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 34297920  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| | || |||||| |||||||||||||||||||||||    
T  34297919 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaaaaatgccgttgtgctgggcatttcagtgctgggt 34297820  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  34297819 atgttgtagacattgcatctgtg 34297797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 254024 - 254246
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  254024 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 254123  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||| ||||||||||||||||    
T  254124 ccatagctgagggcaggtagatatacaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctggacatttcagtgctgggt 254223  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  254224 atgttgtagacattgcatctgtg 254246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 9343359 - 9343581
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||| ||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  9343359 agacaagacattagagtattgggcacgtagtgactcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 9343458  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  9343459 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 9343558  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  9343559 atgttgtagacattgcatctgtg 9343581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 32056622 - 32056400
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||| ||  |||||    
T  32056622 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagatgtgtcggaa 32056523  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||    
T  32056522 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggt 32056423  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  32056422 atgttgtagacattgcatctgtg 32056400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 37679270 - 37679492
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        || ||||||| ||||||| ||| |||||||||||||| |||||    
T  37679270 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 37679369  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  37679370 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 37679469  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  37679470 atgttgtagacattgcatctgtg 37679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 37694535 - 37694757
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        || ||||||| ||||||| ||| |||||||||||||| |||||    
T  37694535 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 37694634  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  37694635 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 37694734  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  37694735 atgttgtagacattgcatctgtg 37694757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 37945237 - 37945459
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||| ||  |||||    
T  37945237 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagatgtgtcggaa 37945336  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||||||||||| |||||    
T  37945337 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgttgggt 37945436  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  37945437 atgttgtagacattgcatctgtg 37945459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 19449776 - 19449985
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatca--------tagaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||        |||||||||||||||||||||||| ||||||||||||    
T  19449776 gcagagacagacaagacattggagtattgggcacgtagtggctcgcgctatatcacacattcttagaaatcctctttggagataacgtcgttgggagacg 19449875  T
Q  141 taccggaaccatggctgagggcagatagc-taatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttc 238  Q
    || ||||||||||||||||||| | |||| ||  |||||||||||||||||||||| ||||||| |  |||| |||||  |||| || ||||||||||||    
T  19449876 tatcggaaccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactccgctggagataataccgtcatcgctgggcatttc 19449975  T
Q  239 agtgctgggt 248  Q
    |||| |||||    
T  19449976 agtgttgggt 19449985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 12593684 - 12593462
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||  | | |        || ||||||| ||||||| ||| |||||||||||||| |||||    
T  12593684 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 12593585  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||| | ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  12593584 ccatggccgagggccggtaggtatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 12593485  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  12593484 atgttgtagacattgcatctgtg 12593462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 23117652 - 23117471
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||| ||    
T  23117652 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggaggcg 23117553  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  23117552 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 23117471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 22921516 - 22921738
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  22921516 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 22921615  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| ||||||||| |||||||||||||||||||||||    
T  22921616 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgggt 22921715  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  22921716 atgttgtagacattgcatctgtg 22921738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 34868447 - 34868282
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||      
T  34868447 gaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactt 34868348  T
Q  206 gactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
     |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  34868347 tactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 34868282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 39045254 - 39045477
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       ||| | | |||||||||||||||||| ||| |||||||||||||  |||||    
T  39045254 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 39045353  T
Q  149 ccatggctgagggcagatagctaatcaactt-gctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctggg 247  Q
    |||| ||||||||||| ||| ||  |||||| ||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||||| |||||||||     
T  39045354 ccatagctgagggcaggtagatatgcaactttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcattccagtgctgga 39045453  T
Q  248 tacgtcgtagatatcgcatctgtg 271  Q
    || || ||||| || |||||||||    
T  39045454 tatgttgtagacattgcatctgtg 39045477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 20844771 - 20844590
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||||| || | |        |||||| ||||||||||| ||| ||||||||||||    
T  20844771 gcagagacagacaagacactggagtattaggcacgtaatggctcgtgctatattacacattcctggaaatcatctttggagatgacgtcgttgggagacg 20844672  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  20844671 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 20844590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 28889110 - 28888929
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  28889110 gcagagacagacaagatgttggagtattgggcatgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 28889011  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  28889010 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 28888929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 203
Target Start/End: Original strand, 27427837 - 27428000
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||||||||| |||||||| ||| ||||||||||||    
T  27427837 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctccttggagatgacgtcgttgggagacg 27427936  T
Q  141 taccggaaccatggctgagggcagatagctaat-caacttgctggggatagaatcttggaagac 203  Q
    || ||||||||||||||||||||| ||||| || |||||||||||||| ||||||| |||||||    
T  27427937 tatcggaaccatggctgagggcaggtagcttatgcaacttgctggggacagaatctcggaagac 27428000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 268
Target Start/End: Complemental strand, 27783093 - 27782874
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||| ||||||| | | |||||| ||||||| |||||    
T  27783093 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgatgtcgttggtagacgtatcggaa 27782994  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||| | ||| ||   |||||||||||||||||||||||  |||| | |||||| | ||||||||| |||||||||||||||| ||||||    
T  27782993 ccatggccgagggccggtaggtatgtaacttgctggggatagaatcttgagagactccactgggaaaaacgccgttgtgctgggcatttcagtactgggt 27782894  T
Q  249 acgtcgtagatatcgcatct 268  Q
    | || ||||| || ||||||    
T  27782893 atgttgtagacattgcatct 27782874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 31883141 - 31882955
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| | |||    
T  31883141 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 31883042  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||| |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||   || ||||| || |||||| ||||||||||    
T  31883041 ccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagactttaccggggacaatgccgttgtgctgggcat 31882955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 31868173 - 31868354
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |        || | |||||||||||||||||| ||| ||||||||||||    
T  31868173 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 31868272  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| |||  |||||||||| | ||| ||   |||||| |||||||||||||| ||||||| | |||||| |||| ||||    
T  31868273 tatcgggacctaggctgagggccggtaggtatgaaacttgatggggatagaatctcggaagactctactgggaataatgccg 31868354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 37384525 - 37384371
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| || ||| ||||||| ||| |||||||||||||| |||||    
T  37384525 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaattcttctgtggagatgacgtcgttgggagacgtatcggaa 37384426  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| |||||||    
T  37384425 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagac 37384371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 40240393 - 40240171
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    ||||||||| || |||||||||||||||||||||||||||||  | | |        || ||||||| ||||||| ||| |||||||||||||| |||||    
T  40240393 agacaagacgttagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 40240294  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||| | ||| ||   ||||||||||||||||| |||||  | || | || ||||| ||||||||| |||||||||||||| ||||||||    
T  40240293 ccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagacactccaccggggaaaacgccgttgtgctgggcatttcaatgctgggt 40240194  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  40240193 atgttgtagacattgcatctgtg 40240171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 222
Target Start/End: Complemental strand, 12662346 - 12662165
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgt 141  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||    
T  12662346 cagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgt 12662247  T
Q  142 accggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccg 222  Q
    | ||| ||||||||||||||||| ||| ||  |||||||| || ||||||||||| ||||||| | |||||| |||| ||||    
T  12662246 atcgggaccatggctgagggcaggtaggtatgcaacttgcttgaggatagaatctcggaagactctactgggaataatgccg 12662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 34161711 - 34161525
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       ||| | | |||||||||||||||||| ||| |||||||||||||| | ||     
T  34161711 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagag 34161612  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||| |||||||||| | ||| ||  ||||||||||||||||||||||||  |||| | || ||||| ||||||||| || |||||||    
T  34161611 ccaaggctgagggctggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgttgtgttgggcat 34161525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 12709996 - 12710169
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||| ||||||| || | |        |||||||||||||||||| ||| ||||||||||||||  ||||    
T  12709996 agacaagacatcagagtattgggcacgtagtggcccgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 12710095  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  | ||||||||||||||||||||||  ||||   ||||||||||| ||||    
T  12710096 ccatggctgagggcaggtaggtatgccacttgctggggatagaatcttgagagactttactggggataatgccg 12710169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 27123370 - 27123216
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  27123370 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 27123271  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    ||  |||||||||| | ||||||  ||||||||||||||||||||||||| ||||    
T  27123270 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagac 27123216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 3790514 - 3790473
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  3790514 agacaagacattagagtattgggcacgtggtggctcgtgcta 3790473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 29836198 - 29835976
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  29836198 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 29836099  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  29836098 ccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagtgctgggt 29835999  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  29835998 atgttgtagacattgcatctgtg 29835976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 12086075 - 12086297
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  12086075 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 12086174  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||||||  |||||||||||  || |||||| ||||| |   |||||||| |||||||||||||||||||||||||||||||||    
T  12086175 ccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgttatgctgggcatttcagtgctgggt 12086274  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| ||||| ||||||||||||    
T  12086275 acgttgtagacatcgcatctgtg 12086297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 28355299 - 28355521
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  28355299 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 28355398  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  28355399 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 28355498  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  28355499 atgttgtagacattgcatctgtg 28355521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 22074267 - 22074475
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |        ||||||||||||||| |||||| ||||||||||||    
T  22074267 gcagagacagacaagacattggaatattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggatataacgtcgttgggagacg 22074366  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttca 239  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |  |||| ||||| ||||| || ||||||||||| |    
T  22074367 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgctggagataatgccgtcatcgctgggcatttaa 22074466  T
Q  240 gtgctgggt 248  Q
    ||| |||||    
T  22074467 gtgttgggt 22074475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 31483218 - 31483440
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  31483218 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 31483317  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||| ||||||| ||||||||||||||||||   |||||||| ||||||||| |||||||||||||||| ||||||    
T  31483318 ccatagctgagggcaggtagatatgcaatttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtactgggt 31483417  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  31483418 atgttgtagacattgcatctgtg 31483440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 2130623 - 2130804
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  2130623 gcagagacagacaagacactggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 2130722  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  2130723 tatcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 2130804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 15774431 - 15774250
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |        |||||||||||||||||| ||| ||||||||||||    
T  15774431 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 15774332  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| ||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  15774331 tatcgggaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 15774250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 19681274 - 19681109
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||      
T  19681274 gaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactt 19681175  T
Q  206 gactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
     |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  19681174 tactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 19681109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 49 - 246
Target Start/End: Complemental strand, 19694973 - 19694767
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||| || || | |        |||||||||||||||||| ||| ||||| ||||||    
T  19694973 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgttatattacacattcctggaaatcctctttggagatgacgtcgttgagagacg 19694874  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||| | ||| ||||||||||    
T  19694873 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccgtcattgccgggcatttca 19694774  T
Q  240 gtgctgg 246  Q
    |||||||    
T  19694773 gtgctgg 19694767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 33265595 - 33265373
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||||||||||||||| || ||| ||||||||||||||  ||||    
T  33265595 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaaatgacgtcgttgggagacgtattggaa 33265496  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||  ||||   |||||||| ||||||||| ||||||||||||||  |||||||    
T  33265495 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttactggggaaaacgccgttgtgctgggcatttcaaagctgggt 33265396  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  33265395 atgttgtagacattgcatctgtg 33265373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 49 - 217
Target Start/End: Complemental strand, 22139771 - 22139595
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || | |        |||||||||||||||||||||| |||||||||||     
T  22139771 gcagagacagacaagacactggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagact 22139672  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    || |||||||||| |||||||||| ||||||  |||||||||||||| ||||||| ||||||| | |||||||||||    
T  22139671 tatcggaaccatgactgagggcaggtagctatacaacttgctggggacagaatctcggaagactctactggggataa 22139595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 49 - 271
Target Start/End: Original strand, 19654681 - 19654912
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        |||||||||||||||||||||| |||||||||||     
T  19654681 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagact 19654780  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || |||||||||| |||||||||| ||||||  |||||||||||||||||||||| ||||| | | |||||| |||| ||||| | | | ||||||||||    
T  19654781 tatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactgggaataatgccgtcattaccgggcatttca 19654880  T
Q  240 gtgctgggtacgtcgtagatatcgcatctgtg 271  Q
    |||| ||||   |||| ||| |||||||||||    
T  19654881 gtgccgggtgtatcgtggatgtcgcatctgtg 19654912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 49 - 203
Target Start/End: Complemental strand, 18797566 - 18797404
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  18797566 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 18797467  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    || ||||||||||||||||||||| ||||||  |||||||||  |||||||||||||| ||||    
T  18797466 tatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagac 18797404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 33249220 - 33249039
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  33249220 gcagagacaaacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 33249121  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| |||| |||||||||| | ||||||  |||||||||||||||||||||||||||||| | |||||| |||| ||||    
T  33249120 tatcgggaccaaggctgagggccggtagctatgcaacttgctggggatagaatcttggaagactctactgggaataatgccg 33249039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 49 - 217
Target Start/End: Complemental strand, 14570012 - 14569836
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| |        || | |||||||||||||||||| ||| ||||||||||||    
T  14570012 gcagagacagacaagacattggagtattgggcacacagtggctcgtgctatactacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14569913  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    || ||||||||||||||||||||| ||||||  ||||| |||||||||||||||| ||||||| | |||||| ||||    
T  14569912 tatcggaaccatggctgagggcaggtagctatgcaactcgctggggatagaatctcggaagactctactgggaataa 14569836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 49 - 271
Target Start/End: Complemental strand, 16260795 - 16260564
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        |||||||||||||||||||||| |||||||||||     
T  16260795 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagact 16260696  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || |||||||||| |||||||||| ||||||  |||||||||||||||||||||| ||||| | | |||||| |||| ||||| | | | ||||||||||    
T  16260695 tatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactgggaataatgccgtcattaccgggcatttca 16260596  T
Q  240 gtgctgggtacgtcgtagatatcgcatctgtg 271  Q
    |||  ||||   |||| ||| |||||||||||    
T  16260595 gtgtcgggtgtatcgtggatgtcgcatctgtg 16260564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 31361404 - 31361181
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  31361404 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 31361305  T
Q  149 ccatggctgagggcagatagctaatcaacttgct-ggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctggg 247  Q
    |||||||||||||||| ||| ||  ||||||||| ||||||| | |||||  |||| | || ||||| ||||||||| ||||||||||||||  ||||||    
T  31361304 ccatggctgagggcaggtaggtatgcaacttgctgggggataaagtcttgagagactccaccggggaaaacgccgttgtgctgggcatttcaacgctggg 31361205  T
Q  248 tacgtcgtagatatcgcatctgtg 271  Q
    || || ||||| || |||||||||    
T  31361204 tatgttgtagacattgcatctgtg 31361181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 44567798 - 44567633
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||||||||||||| ||| |||||||||||||  ||||||||||||||||| ||| ||||||  |||||||||||  |||||||||||||||||      
T  44567798 gaaatcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgaggacaggtagctatgcaacttgctggaaatagaatcttggaagactt 44567699  T
Q  206 gactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
     |||||||| ||||||||| ||||||||||||||  |||||||| || ||||| || |||||||||    
T  44567698 tactggggaaaacgccgttgtgctgggcatttcaaagctgggtatgttgtagacattgcatctgtg 44567633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 21341525 - 21341702
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  21341525 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 21341624  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataa 217  Q
    |  ||||||||||||||||||||| ||||||  |||||||| || ||||||||||| ||||||| | |||||| ||||    
T  21341625 tgtcggaaccatggctgagggcaggtagctatgcaacttgcttgaggatagaatctcggaagactctactgggaataa 21341702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 18716331 - 18716177
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  18716331 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 18716232  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||    
T  18716231 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagac 18716177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 19201730 - 19201917
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  19201730 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 19201829  T
Q  149 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||  ||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||| ||||||||| ||||||||||    
T  19201830 ccacagctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 19201917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 9361478 - 9361257
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | | |        |||||||||||||||| ||| ||||||| |||||| ||||     
T  9361478 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttgaaaatcctctttggagatgacgtcgttgggggacgtatcgga- 9361380  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||| | ||| ||   |||| |||||||||||| |||||  |||| | || ||||| ||||||||| ||||||||||||||||||||| |    
T  9361379 ccatagctgagggccggtaggtatgtaactggctggggatagagtcttgagagactccaccggggaaaacgccgttgtgctgggcatttcagtgctggat 9361280  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||||||||| || |||||||||    
T  9361279 acgtcgtagacattgcatctgtg 9361257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 195
Target Start/End: Original strand, 19910522 - 19910676
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  19910522 gcagagacagacaagacactggagtattgggcacacagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 19910621  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 195  Q
    || ||| ||||||||||||||||| ||||||  |||||||||| |||||||||||    
T  19910622 tatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatct 19910676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 27602268 - 27602449
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||| |||||||||  ||||||||||||| || | |        |||||||||||||||| | ||| ||||||||||||    
T  27602268 gcagagacagacaagacactggagtgttgggcacgcggtggctcgtgctatattacacattcttggaaatcctctttggagctgacgtcgttgggagacg 27602367  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||||||||||| ||||||  |||||||||  |||||||||||||| |||| | |||||| |||| ||||    
T  27602368 tatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagactctactgggaataatgccg 27602449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 15775329 - 15775288
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  15775329 agacaagacattagagtattgggcacgtggtggctcgtgcta 15775288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 15752142 - 15752364
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||| ||| ||| |||||||||||||| |||||    
T  15752142 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaa 15752241  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  15752242 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagcgctgggt 15752341  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  15752342 atgttgtagacattgcatctgtg 15752364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 30036303 - 30036081
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||| ||| ||| |||||||||||||| |||||    
T  30036303 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaa 30036204  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  30036203 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagcgctgggt 30036104  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  30036103 atgttgtagacattgcatctgtg 30036081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 248
Target Start/End: Complemental strand, 22895292 - 22895084
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||||||| ||||||||||||    
T  22895292 gcagagacagacaagtcattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 22895193  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || ||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| | ||||||||| | ||| | | || |||||||||||    
T  22895192 tatcggaaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctactggggatgatgccatcattgttgggcatttca 22895093  T
Q  240 gtgctgggt 248  Q
    |||||||||    
T  22895092 gtgctgggt 22895084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 33523261 - 33523039
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  33523261 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 33523162  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||    
T  33523161 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggt 33523062  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  33523061 atgttgtagacattgcatctgtg 33523039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 40466833 - 40467055
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  40466833 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 40466932  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  40466933 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 40467032  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  40467033 atgttgtagacattgcatctgtg 40467055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 32589559 - 32589781
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||| ||| ||| |||||||||||||  |||||    
T  32589559 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtgtcggaa 32589658  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||| ||||| ||||||||| ||||||||| ||||||||||||||| |||||||    
T  32589659 ccatagctgagggcaggtagatatacaacttgctggagatagaatcttgggagacctgactggggagaacgccgttgtgctgggcatttcagcgctgggt 32589758  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  32589759 atgttgtagacattgcatctgtg 32589781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 49 - 248
Target Start/End: Complemental strand, 23898761 - 23898552
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| || | |        |||||||||||||||||||||| ||||||||||||    
T  23898761 gcagagacagacaagacattggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 23898662  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttc 238  Q
    || ||||||||||||||||||||| ||||||  |||||||| |||||||||||||| ||||||| | ||||||||||| ||||| | ||| |||||||||    
T  23898661 tatcggaaccatggctgagggcaggtagctatgcaacttgcttggggatagaatctcggaagactctactggggataatgccgtcattgccgggcatttc 23898562  T
Q  239 agtgctgggt 248  Q
    ||||| ||||    
T  23898561 agtgccgggt 23898552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 43085124 - 43084909
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacat-catagaaatcctctttggagataacgccgttgggagacgtaccggaaccatggc 155  Q
    |||||||||||| |||||||||||||||| |||||||||||| || | | |||||||||| ||||||| ||| |||||||||||||| ||||||||||||    
T  43085124 agacaagacattagagtattgggcacgtaatggctcgtgctatattcttggaaatcctctctggagatgacgtcgttgggagacgtatcggaaccatggc 43085025  T
Q  156 tgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgt 255  Q
     |||||| | ||| ||   ||||||||||||||||| |||||  |||| | || ||||| ||||||||| |||||||||||||||||||||||| || ||    
T  43085024 cgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgt 43084925  T
Q  256 agatatcgcatctgtg 271  Q
    ||| || |||||||||    
T  43084924 agacattgcatctgtg 43084909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 13318110 - 13318332
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  || |||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  13318110 agacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 13318209  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||  ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||| ||||||||| |||||||||||||||||||||||    
T  13318210 cctaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggt 13318309  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| ||||||||||||||||||    
T  13318310 acgttgtagatatcgcatctgtg 13318332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 37761794 - 37761629
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    ||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||| |||||   ||||||||||| ||||||||||||||||||      
T  37761794 gaaatcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctgtgcaacttgctggagatagaatcttggaagactt 37761695  T
Q  206 gactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
     |||||||| ||||||||| |||||||||||||||||||||||| || ||||| || |||||||||    
T  37761694 tactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 37761629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 3796410 - 3796188
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||||     
T  3796410 agacaagacattagagcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggag 3796311  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||| ||||||||| |||||||||||||||||||||||    
T  3796310 ccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggt 3796211  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| ||  ||||||||    
T  3796210 atgttgtagacatttcatctgtg 3796188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 6881170 - 6880984
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  6881170 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 6881071  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| ||||||||||| ||||||||||    
T  6881070 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataacgccgttgtgctgggcat 6880984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 11330511 - 11330289
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||| ||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  11330511 agacaagacattagagtattgggcacgtagcggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 11330412  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||| | ||| ||   ||||||||||||||||| |||||  ||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  11330411 ccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 11330312  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  11330311 atgttgtagacattgcatctgtg 11330289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 30175345 - 30175123
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||| ||||||||||| ||| |||||||||||||  |||||    
T  30175345 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcttctttggagatgacgtcgttgggagacgtgtcggaa 30175246  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| ||||||||| |||||||||||||||||||||||    
T  30175245 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgggt 30175146  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  30175145 atgttgtagacattgcatctgtg 30175123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 31819762 - 31819891
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||||    
T  31819762 gaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagaccc 31819861  T
Q  206 gactggggataacgccgttatgctgggcat 235  Q
    ||||||||| ||||||||| ||||||||||    
T  31819862 gactggggaaaacgccgttgtgctgggcat 31819891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 18494052 - 18494274
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||| |||||||||||||||       ||| | | |||||||||||||||||| ||| |||||||||||||| |||||    
T  18494052 agacaagacatcagagtattgggcacatagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18494151  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||||||||||   ||||||  ||||||||||||||||||||||||| |||| | || ||||| ||||||||| ||||| |||||||| ||||||||    
T  18494152 ccatggctgagggccagtagctatgcaacttgctggggatagaatcttgggagactctaccggggaaaacgccgttgtgctgagcatttcaatgctgggt 18494251  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  18494252 atgttgtagacattgcatctgtg 18494274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 23727102 - 23726921
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  23727102 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 23727003  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  23727002 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 23726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 28656122 - 28655900
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       ||| | | |||||| ||||||||||| ||| |||||||||||||| ||||     
T  28656122 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcttctttggagatgacgtcgttgggagacgtatcggag 28656023  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
     || |||||||||||| ||| ||  || |||||||||||||||||||||  |||| | || ||||| ||||||||| |||||||||||||||||||||||    
T  28656022 tcaaggctgagggcaggtaggtatgcaccttgctggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcatttcagtgctgggt 28655923  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| ||||| || |||||||||    
T  28655922 acgttgtagacattgcatctgtg 28655900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 22992417 - 22992593
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  22992417 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 22992516  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    |  ||||||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| ||||    
T  22992517 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataa 22992593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 5644677 - 5644455
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  5644677 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 5644578  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||  || |||||||||  || | | |||||||| ||||||||| ||||||||||||||| |||||||    
T  5644577 ccatagctgagggcaggtagatatgcaacttgctgtagacagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagcgctgggt 5644478  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| ||||| || |||||||||    
T  5644477 acgttgtagacattgcatctgtg 5644455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 37351948 - 37352134
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  37351948 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 37352047  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| |  ||||   ||||||||||| |||||| ||||||||||    
T  37352048 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgagagactttactggggataatgccgttgtgctgggcat 37352134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 28953079 - 28953265
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacat--catag------aaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  ||||       ||||||||||||||||| ||| |||||||||||||| ||| |    
T  28953079 agacaagacattggagtattgggcacgtagtggctcgtgctatattacatattcttgaaaatcctctttggagatgacgtcgttgggagacgtatcggga 28953178  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| ||||||  || ||||||||||| ||||||| |||||||   |||||||| ||||||||| ||||||||||    
T  28953179 ccatggctgagggcaggtagctatgcatcttgctggggacagaatctcggaagactttactggggaaaacgccgttgtgctgggcat 28953265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 9324341 - 9324154
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  9324341 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 9324242  T
Q  149 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||| ||||||||| ||||||||||    
T  9324241 ccatggctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 9324154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 26487251 - 26487064
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  26487251 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 26487152  T
Q  149 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||| ||||||||| ||||||||||    
T  26487151 ccatggctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 26487064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 24609110 - 24608929
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        |||||||||||||||||| ||| ||||| ||||||    
T  24609110 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgagagacg 24609011  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  24609010 tatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24608929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 24976709 - 24976528
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  24976709 gcagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 24976610  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  24976609 tatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24976528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 50 - 217
Target Start/End: Complemental strand, 23632834 - 23632659
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgt 141  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||    
T  23632834 cagagacagacaagacactggagtgttgggcacgcggtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgt 23632735  T
Q  142 accggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    | ||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| | |||||| ||||    
T  23632734 atcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctactgggaataa 23632659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 50 - 217
Target Start/End: Complemental strand, 25207173 - 25206998
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacgt 141  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| | | |        |||||||||||||||||||| ||| |||||||||    
T  25207173 cagagatagtcaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctgggaatcctctttggagataacgtcgtcgggagacgt 25207074  T
Q  142 accggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    | | |||||| |||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||| ||||||    
T  25207073 atcagaaccagggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgaggataa 25206998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 50 - 217
Target Start/End: Complemental strand, 25271329 - 25271154
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacgt 141  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| | | |        |||||||||||||||||||| ||| |||||||||    
T  25271329 cagagatagtcaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctgggaatcctctttggagataacgtcgtcgggagacgt 25271230  T
Q  142 accggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    | | |||||| |||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||| ||||||    
T  25271229 atcagaaccagggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgaggataa 25271154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 12139039 - 12138853
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||||     
T  12139039 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggag 12138940  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||| ||||||||| ||||||||||    
T  12138939 ccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcat 12138853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 33881983 - 33881797
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    ||||||||| || ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||| |    
T  33881983 agacaagacgttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggga 33881884  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||  |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||||    
T  33881883 cctaggctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 33881797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 9544012 - 9544185
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  9544012 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 9544111  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  ||||| |||||||||||||||| ||||||| | |||||| |||| ||||    
T  9544112 ccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctactgggaataatgccg 9544185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 49 - 217
Target Start/End: Complemental strand, 11556219 - 11556043
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatca--------tagaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |        | |||||||||||||||||| ||| ||||||||||||    
T  11556219 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacg 11556120  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    || ||| |||  |||||||||| | ||||||  |||||||||||||||||| |||||| |||| | |||||| ||||    
T  11556119 tatcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactgggaataa 11556043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 37745635 - 37745819
Alignment:
Q  59 acaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaacc 150  Q
    |||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||||    
T  37745635 acaagacatcagagtattgggcacgtagtggctcgtgctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaacc 37745734  T
Q  151 atggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||||  ||||   |||||||| ||| ||||| ||||||||||    
T  37745735 atggctgagggcaggtagctatgcaactcgctggggatagaatcttgagagactttactggggaaaacaccgttgtgctgggcat 37745819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 13435953 - 13436175
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| | |||||||||||| | ||     
T  13435953 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcattgggagacgtatcagag 13436052  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||| |||||||||| | ||| ||  ||||||||||||||||||||||||  |||| | || ||||| ||||||||| ||||||||||||||| | |||||    
T  13436053 ccaaggctgagggctggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcatttcagcgttgggt 13436152  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  13436153 atgttgtagacattgcatctgtg 13436175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 18368814 - 18369036
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        || || |||| ||||||| ||| |||||||||||||| |||||    
T  18368814 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagattctctatggagatgacgtcgttgggagacgtatcggaa 18368913  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||| | ||| ||   |||||||||||||||||  ||||  |||| | |||||||| ||||||||| ||||||||||||||||||||| |    
T  18368914 ccatggccgagggccggtaggtatgtaacttgctggggatagagccttgagagactccactggggaaaacgccgttgtgctgggcatttcagtgctggat 18369013  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  18369014 atgttgtagacattgcatctgtg 18369036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 30158897 - 30158711
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| | |||    
T  30158897 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 30158798  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||| ||||||||  || ||| ||  ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||    
T  30158797 ccaaggctgaggataggtaggtatgcaacttgctggagatagaatcttggaagacttgactggggaaaatgccgttgtgctgggcat 30158711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 222
Target Start/End: Complemental strand, 30941492 - 30941314
Alignment:
Q  52 gagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtac 143  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||||     
T  30941492 gagacagacaagacactggagtattgggcacacagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtat 30941393  T
Q  144 cggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    ||| ||||||||||||||||| ||||||  |||||||||| ||||||||||| || |||| | |||||| |||| ||||    
T  30941392 cgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactctactgggaataatgccg 30941314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 34623376 - 34623190
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||||     
T  34623376 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggag 34623277  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||| ||||| |||||| ||| ||  ||||||||||||||||||||||||  |||| | || ||||| ||||||||| ||||||||||    
T  34623276 ccaaggctgggggcaggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 34623190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 2517922 - 2517749
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||||||||     
T  2517922 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtaccggag 2517823  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    ||| ||||||||||||  || ||  ||||||||||| |||||||||||| |||||   ||||||||||| ||||    
T  2517822 ccacggctgagggcaggcaggtatgcaacttgctggagatagaatcttgaaagactttactggggataatgccg 2517749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 18121717 - 18121886
Alignment:
Q  57 agacaagacattg-gagtattgggcacgtagtggctcgtgctacatca--------tagaaatcctctttggagataacgccgttgggagacgtaccgga 147  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||        | |||||||||||||||||| ||| |||||||||||||  ||||    
T  18121717 agacaagacatttagagtattgggcacgtagtggctcgtgctatatcacgcattcctggaaatcctctttggagatgacgtcgttgggagacgtgtcgga 18121816  T
Q  148 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    |||| |||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| ||||    
T  18121817 accaaggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataa 18121886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 33299401 - 33299220
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |        || | |||||||||||||||||| ||| ||||||||||||    
T  33299401 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 33299302  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| |||  ||| |||||| | ||||||  |||||||||||||||||||| | || |||| | |||||| |||| ||||    
T  33299301 tatcgggacctaggcggagggccggtagctatgcaacttgctggggatagaatatcgggagactctactgggaataatgccg 33299220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 33784347 - 33784166
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |        || | |||||||||||||||||| ||| ||||||||||||    
T  33784347 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacg 33784248  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| |||   | ||||||| | ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  33784247 tatcgggacctaagttgagggccggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 33784166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 13180093 - 13180241
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  13180093 gcagagacagacaagacactggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 13180192  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggata 189  Q
    || ||| ||||||||||||||||| ||| ||  ||||| ||||||||||    
T  13180193 tatcgggaccatggctgagggcaggtaggtatgcaactcgctggggata 13180241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 15652045 - 15652218
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| | | |||||||||||||  || ||    
T  15652045 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgatgtcgttgggagacgtgtcgaaa 15652144  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    ||| |||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  15652145 ccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 15652218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 31438314 - 31438141
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||||  ||||    
T  31438314 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 31438215  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||  ||  ||||||||||||||||||||||||  ||||   ||||||||||| ||||    
T  31438214 ccatggctgagggcaggtaagtatgcaacttgctggggatagaatcttgagagactttactggggataatgccg 31438141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 8658777 - 8658931
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  |||| |||||||||||||||||||||||| || | |        |||||||||||||||||| ||| || ||||||||||| |||||    
T  8658777 agacaagacatcagagtgttgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgctgggagacgtatcggaa 8658876  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    |||||||||||||||| ||||||  |||||||||||  ||||||||| |||||||    
T  8658877 ccatggctgagggcaggtagctatgcaacttgctggaaatagaatctcggaagac 8658931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 24730826 - 24730653
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||| ||||||| || | |        |||||||||||||||||| ||| ||||||||||||||  ||||    
T  24730826 agacaagacatcagagtattgggcacgtagtggcccgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 24730727  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  | ||||||||||||||||||||||  ||||   ||||||||||| ||||    
T  24730726 ccatggctgagggcaggtaggtatgccacttgctggggatagaatcttgagagactttactggggataatgccg 24730653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 41681564 - 41681408
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacat----cat------agaaatcctctttggagataacgccgttgggagacgtaccgg 146  Q
    ||||||| |||| ||||||||||||||||||||||||||||| ||    |||      | ||||||||||||||||| ||| |||||||||||||  |||    
T  41681564 agacaagtcattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaaaatcctctttggagatgacgtcgttgggagacgtgtcgg 41681465  T
Q  147 aaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    ||||||| |||||||||| || |||  |||||||||||||||||||||| |||||||    
T  41681464 aaccatgactgagggcaggtaactatgcaacttgctggggatagaatctcggaagac 41681408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 37664788 - 37664961
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    ||||||||| || ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  37664788 agacaagacgttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 37664887  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    ||| |||||||||  |  || ||  ||||||||||| |||||||||||| |||||   |||||||| |||||||    
T  37664888 ccaaggctgagggtgggcaggtatgcaacttgctggagatagaatcttgaaagactttactggggaaaacgccg 37664961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 13178783 - 13178824
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  13178783 agacaagacattagagtattgggcacgtggtggctcgtgcta 13178824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 24335010 - 24334788
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||| ||| ||| |||||||||||||| |||||    
T  24335010 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaa 24334911  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||||||  || ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  24334910 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagaccccactggggaaaacgccgttgtgctgggcatttcagtgctgggt 24334811  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  24334810 atgttgtagacattgcatctgtg 24334788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 18232026 - 18231804
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  18232026 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 18231927  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||    
T  18231926 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggt 18231827  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  18231826 atgttgtagacattgcatctgtg 18231804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 59 - 271
Target Start/End: Original strand, 17978378 - 17978598
Alignment:
Q  59 acaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaacc 150  Q
    |||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||||    
T  17978378 acaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaacc 17978477  T
Q  151 atggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggtac 250  Q
    || ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||     
T  17978478 atagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggtat 17978577  T
Q  251 gtcgtagatatcgcatctgtg 271  Q
    || ||||| || |||||||||    
T  17978578 gttgtagacattgcatctgtg 17978598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 6536168 - 6536390
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  || |||||||||||||||||||||||||| || | |        ||||||||||||| |||| ||| |||||||||||||| |||||    
T  6536168 agacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaa 6536267  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||   |||||||| ||||||||| |||||||||||||||| ||||||    
T  6536268 ccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtactgggt 6536367  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| || || ||||||||||||    
T  6536368 acgttgtggacatcgcatctgtg 6536390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 10649904 - 10649683
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  10649904 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 10649805  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||||||| |  |||||||| ||||||||| |||||||||||||||||||||||    
T  10649804 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttggaaga-cttactggggaaaacgccgttgtgctgggcatttcagtgctgggt 10649706  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  10649705 atgttgtagacattgcatctgtg 10649683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 29658392 - 29658614
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       ||| | | |||||||||||||||||| ||| |||||||||||||   ||||    
T  29658392 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgttggaa 29658491  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  29658492 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 29658591  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  29658592 atgttgtagacattgcatctgtg 29658614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 28109388 - 28109575
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  28109388 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 28109487  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc-gactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||| ||||||||| ||||||||| ||||||||||    
T  28109488 ccatggctgagggcaggtagctaaacaacttgctggagatagaatcttggaaaaccctgactggggaaaacgccgttgtgctgggcat 28109575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 50 - 248
Target Start/End: Complemental strand, 15368085 - 15367877
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |        |||||||||||||||||||||| | |||||||||||    
T  15368085 cagagacagacaagacattggagtattgggcacgtagtggctcgcgctacatcacacattcttggaaatcctctttggagataacgtcattgggagacgt 15367986  T
Q  142 accggaaccatggctgagggcagatagc-taatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttca 239  Q
    | ||||||||||| ||||||| | |||| ||  |||||||||||||||||||||| ||||||| |  |||||||||| ||||| || |||||||||||||    
T  15367985 atcggaaccatggttgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactctgctggggataatgccgtcatcgctgggcatttca 15367886  T
Q  240 gtgctgggt 248  Q
    ||| |||||    
T  15367885 gtgttgggt 15367877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 53 - 248
Target Start/End: Complemental strand, 19701233 - 19701029
Alignment:
Q  53 agacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtacc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||| ||||||||||||||||| |||||||||||| |    
T  19701233 agacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcttctttggagataacgccattgggagacgtatc 19701134  T
Q  145 ggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttcagtgc 243  Q
    ||||||||| |||||||||| ||||||  |||||||||||||||||||||| ||||||| | ||||||||||| ||||| | ||| |||| |||||||||    
T  19701133 ggaaccatgactgagggcaggtagctatacaacttgctggggatagaatctcggaagactctactggggataatgccgtcattgccgggcctttcagtgc 19701034  T
Q  244 tgggt 248  Q
     ||||    
T  19701033 cgggt 19701029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 49 - 271
Target Start/End: Original strand, 15886157 - 15886388
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        |||||||||||||||||||||| ||||||||||||    
T  15886157 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 15886256  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || ||||||||||||||||||||| ||||||  || ||||||||||||||||||| ||||||| | |||||| |||| ||||| | ||| |||||||||     
T  15886257 tatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatctcggaagactctactgggaataatgccgtcattgccgggcatttct 15886356  T
Q  240 gtgctgggtacgtcgtagatatcgcatctgtg 271  Q
    ||||||| |   |||| ||| |||||||||||    
T  15886357 gtgctggatgtatcgtggatgtcgcatctgtg 15886388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 5020545 - 5020323
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  5020545 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 5020446  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||||||||||||||||  ||||   |||||||| ||||||||| ||||||||||||||  |||||||    
T  5020445 ccatagctgagggcaggtagatatgcaacttgctggggatagaatcttgagagactttactggggaaaacgccgttgtgctgggcatttcaaagctgggt 5020346  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  5020345 atgttgtagacattgcatctgtg 5020323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 28346005 - 28345783
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  28346005 agacaagacattagagtattgggcacgtagtggctcgtgctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 28345906  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| ||||||||| |||||||||||||||||||||||    
T  28345905 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgggt 28345806  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  28345805 atgttgtagacattgcatctgtg 28345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 4728446 - 4728265
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  4728446 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 4728347  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |  ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  4728346 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 4728265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 5658954 - 5658773
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  5658954 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacaccttcctggaaatcctctttggagatgacgtcgttgggagacg 5658855  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  5658854 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 5658773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 6208715 - 6208534
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  6208715 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 6208616  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |  ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  6208615 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 6208534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 5589781 - 5590003
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||| ||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  5589781 agacaagacattagagtattgggcacgtagtgactcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 5589880  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||| | ||||||||||||||||||| ||||||||| || ||||||  |||||||||||||||||||| |    
T  5589881 ccatagctgagggcaggtaggtatgcaacttgctagagatagaatcttggaagacctgactggggaaaatgccgttgcgctgggcatttcagtgctggat 5589980  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  5589981 atgttgtagacattgcatctgtg 5590003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 5602738 - 5602960
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  5602738 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 5602837  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| ||||||||| |||||||||||||||||||||||    
T  5602838 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgggt 5602937  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  5602938 atgttgtagacattgcatctgtg 5602960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 32297465 - 32297243
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        || ||||||| ||||||| ||| |||||||||||||| |||||    
T  32297465 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 32297366  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||| | ||| ||  ||||| ||||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  32297365 ccatggccgagggccggtaggtatgcaactcgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggt 32297266  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || || ||||||    
T  32297265 atgttgtagacattgcctctgtg 32297243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 51788799 - 51788634
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||      
T  51788799 gaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactt 51788700  T
Q  206 gactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
     |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  51788699 tactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 51788634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 16617907 - 16618116
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |        ||||||||||||||||||| || ||||||||||||    
T  16617907 gcagagacagacaagacattggagtattgggcacgtagtagctcgtgctatatcacacattcttggaaatcctctttggagatatcgtcgttgggagacg 16618006  T
Q  141 taccggaaccatggctgagggcagatagc-taatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttc 238  Q
     | ||||||||||||||||||| | |||| ||  |||||||||||||||||||||| ||||||| |  |||||||||| || || || ||||||||||||    
T  16618007 catcggaaccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactccgctggggataatgctgtcatcgctgggcatttc 16618106  T
Q  239 agtgctgggt 248  Q
    |||| |||||    
T  16618107 agtgttgggt 16618116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 18058088 - 18057907
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  18058088 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 18057989  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  18057988 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 18057907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 22381020 - 22381201
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||        |||||||||||||||||| ||| ||||||||||||    
T  22381020 gcagagacagacaggacattggagtattgggcacgtagtggctcgtgctatattatactttcctggaaatcctctttggagatgacgtcgttgggagacg 22381119  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |  ||||||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  22381120 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 22381201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 29142194 - 29142375
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||||||||||| |||||| ||| ||||||||||||    
T  29142194 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctcttcggagatgacgtcgttgggagacg 29142293  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  29142294 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 29142375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 49 - 217
Target Start/End: Complemental strand, 18337444 - 18337268
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||        |||||||||||||||||| ||| ||||||||||||    
T  18337444 gcagagacagacaggacattggagtattgggcacgtagtggctcgtgctatattatactttcctggaaatcctctttggagatgacgtcgttgggagacg 18337345  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    |  ||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| ||||    
T  18337344 tgtcggaaccctggctgagggcaggtagctacgcaacttgctggggatagaatcttgggagactctactgggaataa 18337268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 49 - 243
Target Start/End: Complemental strand, 4690495 - 4690292
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  4690495 gcagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 4690396  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||| | ||||||||||||||    
T  4690395 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccgtcattgctgggcatttca 4690296  T
Q  240 gtgc 243  Q
    ||||    
T  4690295 gtgc 4690292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 47030290 - 47030068
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  || |||||||||||||||||||||||||| || | |        ||||||||||||| |||| ||| |||||||||||| | |||||    
T  47030290 agacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgcatcggaa 47030191  T
Q  149 ccatggctgagggcagatagctaatcaac-ttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctggg 247  Q
    |||||||||||||||| ||||||  |||| ||||||| |||||||||||||||||| | |||||||| ||||||||| ||||||||| ||||||||||||    
T  47030190 ccatggctgagggcaggtagctatgcaactttgctggagatagaatcttggaagactccactggggaaaacgccgttgtgctgggca-ttcagtgctggg 47030092  T
Q  248 tacgtcgtagatatcgcatctgtg 271  Q
    || || ||||| || |||||||||    
T  47030091 tatgttgtagacattgcatctgtg 47030068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 16404217 - 16404439
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||| ||||||| ||| ||||||| |||||| ||||     
T  16404217 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggggacgtatcggag 16404316  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||| |||||||||||| ||| ||  ||||||||||||||||||||||||  |||||  || ||||| ||||||||| |||||||||| ||||||||||||    
T  16404317 ccaaggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagacctcaccggggaaaacgccgttgtgctgggcatctcagtgctgggt 16404416  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| ||||| || |||||||||    
T  16404417 acgttgtagacattgcatctgtg 16404439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 49 - 223
Target Start/End: Complemental strand, 16423027 - 16422845
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||| || |||||||||||| |||||||||||||||||| || | |        |||||||||||||||||||||| ||||||||||||    
T  16423027 gcagagacagacaaggcactggagtattgggtacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 16422928  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 223  Q
    || ||||||||||||||||||||| ||| ||  |||||||| ||||||||||||| ||||||| | ||||||||||| |||||    
T  16422927 tatcggaaccatggctgagggcaggtagttatgcaacttgcaggggatagaatctcggaagactctactggggataatgccgt 16422845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 20570281 - 20570503
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||| ||||||| ||| |||||||||||||| |||||    
T  20570281 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaa 20570380  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||| | | ||| ||   |||||||||||||||||||||||  |||| | |||||||| ||||||||| |||||||||||||||| ||||||    
T  20570381 ccatggccgaggaccggtaggtatgtaacttgctggggatagaatcttgagagactccactggggaaaacgccgttgtgctgggcatttcagtactgggt 20570480  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  20570481 atgttgtagacattgcatctgtg 20570503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 5717886 - 5717703
Alignment:
Q  60 caagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaacca 151  Q
    ||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||||||||    
T  5717886 caagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaacca 5717787  T
Q  152 tggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    | ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||||    
T  5717786 tagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 5717703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 5728796 - 5728613
Alignment:
Q  60 caagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaacca 151  Q
    ||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||||||||    
T  5728796 caagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaacca 5728697  T
Q  152 tggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    | ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||||    
T  5728696 tagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 5728613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 5763572 - 5763755
Alignment:
Q  60 caagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaacca 151  Q
    ||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||||||||    
T  5763572 caagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaacca 5763671  T
Q  152 tggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    | ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||||    
T  5763672 tagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 5763755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 31957881 - 31958103
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| |||  ||||||||||||  |||||    
T  31957881 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgttgttgggagacgtgtcggaa 31957980  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| ||| ||||| |||||||||||||||||||||||    
T  31957981 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacaccgttgtgctgggcatttcagtgctgggt 31958080  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  31958081 atgttgtagacattgcatctgtg 31958103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 4790071 - 4790252
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| || | |        ||||||||||| |||||| ||| ||||||||||||    
T  4790071 gcagagacagacaagacattggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctcttcggagatgacgtcgttgggagacg 4790170  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||||||||||||||||||||| ||||||  |||||||||  |||||||||||||| |||| | |||||| |||| ||||    
T  4790171 tatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagactctactgggaataatgccg 4790252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 11103809 - 11103982
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  11103809 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 11103908  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  11103909 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 11103982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 49 - 248
Target Start/End: Complemental strand, 22041250 - 22041041
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |        ||||||||||||||||||| || ||||||||||||    
T  22041250 gcagagacagacaagacattggagtattgggcacgtagtagctcgtgctatatcacacattcttggaaatcctctttggagatatcgtcgttgggagacg 22041151  T
Q  141 taccggaaccatggctgagggcagatagc-taatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttc 238  Q
     | ||||||||||||||||||| | |||| ||  |||||||||||||||||||||| ||||||| |  |||| |||||  | || || ||||||||||||    
T  22041150 catcggaaccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactccgctggagataatacagtcatcgctgggcatttc 22041051  T
Q  239 agtgctgggt 248  Q
    |||| |||||    
T  22041050 agtgttgggt 22041041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 35887580 - 35887399
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || | | |        |||||||||||||||| ||| ||||||||||||    
T  35887580 gcagagacagacaagacattgaagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacg 35887481  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |  ||||||||||||||||||||| ||||||  |||||||||||||||||| |||||| |||| | |||||| |||| ||||    
T  35887480 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagagtcttgggagactctactgggaataatgccg 35887399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 8282900 - 8283076
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  8282900 gcagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 8282999  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| ||||    
T  8283000 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggtataa 8283076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 195
Target Start/End: Original strand, 15734558 - 15734710
Alignment:
Q  51 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgta 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||||    
T  15734558 agagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgta 15734657  T
Q  143 ccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 195  Q
     ||| ||||||| ||||||||| ||||||  ||||||||||||||||||||||    
T  15734658 tcgggaccatggttgagggcaggtagctatgcaacttgctggggatagaatct 15734710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 10402986 - 10402764
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||  | | |        || ||||||| ||||||| ||| |||||||||||||| |||||    
T  10402986 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 10402887  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| | |||| | ||| ||   ||||||||||||||||| |||||  |||||| || ||||| ||||||||| |||||||||||||||||||||||    
T  10402886 ccatggccgggggccggtaggtatgtaacttgctggggatagagtcttgagagaccccaccggggaaaacgccgttgtgctgggcatttcagtgctgggt 10402787  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  10402786 atgttgtagacattgcatctgtg 10402764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 31029691 - 31029864
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  31029691 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 31029790  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    ||| |||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  31029791 ccacggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 31029864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 17970305 - 17970492
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||| ||  ||||    
T  17970305 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacatattggaa 17970404  T
Q  149 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    |||||||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||| ||||||||| ||||||||||    
T  17970405 ccatggctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 17970492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 21681554 - 21681332
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        || ||||||| ||||||| ||| |||||||||||||| |||||    
T  21681554 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 21681455  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||| | ||| ||   ||||||||||||||||| |||||  |||| |  | ||||| ||||||||| |||||||||||||| ||||||||    
T  21681454 ccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccgccggggaaaacgccgttgtgctgggcatttcaatgctgggt 21681355  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  21681354 atgttgtagacattgcatctgtg 21681332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 4340124 - 4340297
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||||     
T  4340124 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggag 4340223  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    ||| |||||||||||| ||| ||  ||||||||||||||||||||||||| |||| | ||||||||||| ||||    
T  4340224 ccaaggctgagggcaggtaggtatgcaacttgctggggatagaatcttgggagactctactggggataatgccg 4340297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 5473801 - 5473628
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  5473801 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 5473702  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  ||||| |||||||||||||||| ||||||| | |||||| |||| ||||    
T  5473701 ccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctactgggaataatgccg 5473628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 18285804 - 18285977
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||| ||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  18285804 agacgagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18285903  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  18285904 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 18285977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 18301105 - 18301278
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||| ||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  18301105 agacgagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18301204  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  18301205 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 18301278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 32445964 - 32445791
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  |||||||||||||||||||||||||||||       ||| | | |||||||||||||| ||| ||| |||||||||||||  |||||    
T  32445964 agacaagacatcagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggtgatgacgtcgttgggagacgtgtcggaa 32445865  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  32445864 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 32445791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 22864289 - 22864464
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    ||||||||| |  ||||||||||||||||||||||||||||| || | |        ||||||||||||| |||| ||| |||||||||||||| |||||    
T  22864289 agacaagacgtcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaa 22864388  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 224  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||| ||||   |||||||| |||||||||    
T  22864389 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgggagactttactggggaaaacgccgtt 22864464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 22879348 - 22879523
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    ||||||||| |  ||||||||||||||||||||||||||||| || | |        ||||||||||||| |||| ||| |||||||||||||| |||||    
T  22879348 agacaagacgtcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaa 22879447  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 224  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||| ||||   |||||||| |||||||||    
T  22879448 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgggagactttactggggaaaacgccgtt 22879523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 4423730 - 4423557
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||||  ||||    
T  4423730 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 4423631  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||  ||||   ||||||||||| ||||    
T  4423630 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttactggggataatgccg 4423557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 4630593 - 4630420
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  |||||||||||||||||||||||||||||       ||| | | |||||||||||||| ||| ||| |||||||||||||  |||||    
T  4630593 agacaagacatcagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggtgatgacgtcgttgggagacgtgtcggaa 4630494  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||  ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  4630493 ccatggctgagggcatgtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 4630420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 18249552 - 18249369
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||| ||||||| ||| ||||||| |||||| |||||    
T  18249552 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggggacgtatcggaa 18249453  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctggg 232  Q
    ||||||| |||||| | ||| ||   ||||||||||||||||| |||||  |||| | || ||||| ||||||||| |||||||    
T  18249452 ccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccgttgtgctggg 18249369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 20072847 - 20072693
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  20072847 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 20072748  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    ||  |||||||||| | ||||||  ||||||||||||||||||||||||| ||||    
T  20072747 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagac 20072693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 28028105 - 28027919
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||| | |        ||||||||||| |||||| ||| |||||||||||||  ||| |    
T  28028105 agacaagacattagagtaatgggcaagtagtggctcgtgctacattacacattcttggaaatcctcttcggagatgacgtcgttgggagacgtgtcggga 28028006  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||  |||||||||| | ||| ||  ||||||||||||||||||||||||  ||||   |||||||| ||||||||| ||||||||||    
T  28028005 cctaggctgagggccggtaggtatgcaacttgctggggatagaatcttgagagactttactggggaaaacgccgttgtgctgggcat 28027919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 48472744 - 48472590
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  48472744 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 48472645  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    ||  |||||||||| | ||||||  ||||||||||||||||||||||||| ||||    
T  48472644 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagac 48472590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 7079981 - 7079867
Alignment:
Q  108 aatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccga 207  Q
    |||| ||| ||| ||||||| |||||||||||||  |||||||| |||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |    
T  7079981 aatcttctctggggataacgtcgttgggagacgtgtcggaaccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactcta 7079882  T
Q  208 ctggggataacgccg 222  Q
    ||||| |||| ||||    
T  7079881 ctgggaataatgccg 7079867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 8218402 - 8218273
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||   |||||||||| |||||| |||||  |||| |    
T  8218402 gaaatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggagatagagtcttgagagactc 8218303  T
Q  206 gactggggataacgccgttatgctgggcat 235  Q
     |||||||| ||||||||| ||||||||||    
T  8218302 cactggggaaaacgccgttgtgctgggcat 8218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 7080063 - 7080022
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  7080063 agacaagacattagagtattgggcacgtagtggctcgtgcta 7080022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 16599447 - 16599406
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  16599447 agacaagacattagagtattgggcacgtagtggctcgtgcta 16599406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 14814 - 14592
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  14814 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 14715  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||||||  |||||||||||  || |||||| ||||| |   |||||||| |||||||||||||||||||||||||||||||||    
T  14714 ccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgttatgctgggcatttcagtgctgggt 14615  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| ||||| ||||||||||||    
T  14614 acgttgtagacatcgcatctgtg 14592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 4e-53; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 51645096 - 51644874
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||||||||||||| |||| ||| |||||||||||||| |||||    
T  51645096 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaa 51644997  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||   |||||||| ||||||||| |||||||||||||||| ||||||    
T  51644996 ccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtactgggt 51644897  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    |||| ||||| || |||||||||    
T  51644896 acgttgtagacattgcatctgtg 51644874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 20333793 - 20334001
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||||||| ||||||||||||    
T  20333793 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagataacgtcgttgggagacg 20333892  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || |||||||||||| |||||||| ||||||  ||||||||||||||||||||||  |||||| |  |||||||||| ||| | | ||||||||||||||    
T  20333893 tatcggaaccatggccgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccatcactgctgggcatttca 20333992  T
Q  240 gtgctgggt 248  Q
    |||||||||    
T  20333993 gtgctgggt 20334001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 10951966 - 10951744
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  10951966 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 10951867  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||| |||||||||||| ||||||| ||||||||||| ||||||||||||  || | | |||||||| ||||||||| |||||||||||||||| ||||||    
T  10951866 ccacggctgagggcaggtagctaaacaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtactgggt 10951767  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||| | ||||||||||||    
T  10951766 aagttgtaaacatcgcatctgtg 10951744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 16201407 - 16201583
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| || | |        ||||||||||||||||||||| |||||||||||||    
T  16201407 gcagagacagacaagacattggagtattgggcacgtagtggctcatgctatattacacattcctggaaatcctctttggagataacaccgttgggagacg 16201506  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 217  Q
    || |||||||||| |||||||||| ||||||  ||||||||||||| |||||||| ||||||| | |||||||||||    
T  16201507 tatcggaaccatgactgagggcaggtagctatgcaacttgctgggggtagaatctcggaagactctactggggataa 16201583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 51 - 248
Target Start/End: Complemental strand, 20467664 - 20467458
Alignment:
Q  51 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgta 142  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||| || | |        |||||||||||||||||||||| ||||||||||| ||    
T  20467664 agagacagacaaggcattggagtattggccacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacata 20467565  T
Q  143 ccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttcagt 241  Q
     |||||||||||||||||| || ||||||   ||||||||||||||||||||| ||||||| |  |||||||||| ||||| || |||||||||||||||    
T  20467564 tcggaaccatggctgagggtaggtagctatgtaacttgctggggatagaatctcggaagactctgctggggataatgccgtcatcgctgggcatttcagt 20467465  T
Q  242 gctgggt 248  Q
    | |||||    
T  20467464 gttgggt 20467458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 14692293 - 14692474
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  14692293 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14692392  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |  |||||||||||||||| |||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  14692393 tgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 14692474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 14694975 - 14695156
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  14694975 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14695074  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |  |||||||||||||||| |||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  14695075 tgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 14695156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 14697659 - 14697840
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  14697659 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14697758  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |  |||||||||||||||| |||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  14697759 tgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 14697840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 49 - 212
Target Start/End: Original strand, 14700340 - 14700511
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  14700340 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14700439  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 212  Q
    |  |||||||||||||||| |||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  14700440 tgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 14700511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 49 - 243
Target Start/End: Original strand, 21891126 - 21891329
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||| || | |        |||||||||||||||||| ||| ||||||||||||    
T  21891126 gcagagacatacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 21891225  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 239  Q
    || ||||||||||||||||||||| ||||||  || ||||||||||||||||||| ||||||| | |||||| |||| ||||| | | | ||||||||||    
T  21891226 tatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatctcggaagactctactgggaataatgccgtcattaccgggcatttca 21891325  T
Q  240 gtgc 243  Q
    ||||    
T  21891326 gtgc 21891329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 28591955 - 28591733
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  28591955 agacaagacattagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 28591856  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    ||||||| |||||| | ||| ||   |||||||| |||||||| |||||  |||| | |||||||| ||||||||| ||||||||||||||||||||| |    
T  28591855 ccatggccgagggctggtaggtatgtaacttgctagggatagagtcttgagagactccactggggaaaacgccgttgtgctgggcatttcagtgctggat 28591756  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  28591755 atgttgtagacattgcatctgtg 28591733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 3648021 - 3647799
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||  | | |        || ||||||| ||||||| ||| |||||||||||||| |||||    
T  3648021 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 3647922  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||||||||||||||| ||| ||   ||||||||||||||||| |||||  |||| | || ||||| ||||||||| |||||||||||||| ||||||||    
T  3647921 ccatggctgagggcaggtaggtatgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccgttgtgctgggcatttcaatgctgggt 3647822  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || || ||||||    
T  3647821 atgttgtagacattgcgtctgtg 3647799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 10969517 - 10969344
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||| ||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  10969517 agacaagacattagagtattgggcacgtagtgactcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 10969418  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    |||||||||||||||| ||| ||  | ||||||||||||||||||||||  ||||   ||||||||||| ||||    
T  10969417 ccatggctgagggcaggtaggtatgccacttgctggggatagaatcttgagagactttactggggataatgccg 10969344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 41786718 - 41786903
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    ||||||||| |  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  41786718 agacaagacgtcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 41786817  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||| ||||||||||||  || ||  ||||||||||| |||||||||||| |||||   ||||||||||| ||||  |||||||||||    
T  41786818 ccacggctgagggcaggcaggtatgcaacttgctggagatagaatcttgaaagactttactggggataatgccg-gatgctgggcat 41786903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 28156579 - 28156425
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  28156579 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 28156480  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 203  Q
    ||  |||||||||| | ||||||  ||||||||||||||||||||||||| ||||    
T  28156479 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagac 28156425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 52 - 248
Target Start/End: Complemental strand, 28169 - 27966
Alignment:
Q  52 gagacagacaagacattggagtattgggcacgtagtggctcgtgcta-----cat-catagaaatcctctttggagataacgccgttgggagacgtaccg 145  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||     ||| | | |||||||||||||||||||||| |||||||||||||| ||    
T  28169 gagacagacaagacattggagtattgggcacgtagtggctcgttatatcacacattcttggaaatcctctttggagataacgtcgttgggagacgtatcg 28070  T
Q  146 gaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttcagtgct 244  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||| ||||||| |  |||||||||| ||||| || |||||||||||||||| |    
T  28069 gaaccatggctgagggcaggtagctatataacttgctggggatagaatctcggaagactccgctggggataatgccgtcatcgctgggcatttcagtgtt 27970  T
Q  245 gggt 248  Q
    ||||    
T  27969 gggt 27966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 49 - 248
Target Start/End: Complemental strand, 652 - 444
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || | |        |||||||||||||||||||||| ||||||||||||    
T  652 gcagagacagacaagacattggagtattgggcacgtagtgtctcgtgctatattacacattcccggaaatcctctttggagataacgtcgttgggagacg 553  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttca 239  Q
    || | ||||||||| ||||||||| ||||||  |||| ||||||||||||||||| ||||||| |  |||||||||| |||||||| | |||||||||||    
T  552 tatcagaaccatggttgagggcaggtagctatgcaacctgctggggatagaatctcggaagactctgctggggataatgccgttatcgttgggcatttca 453  T
Q  240 gtgctgggt 248  Q
    |||||||||    
T  452 gtgctgggt 444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 248
Target Start/End: Complemental strand, 12931 - 12722
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |        |||||||||||||||||||||| ||||||||||||    
T  12931 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacattacacatccctggaaatcctctttggagataacgtcgttgggagacg 12832  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact-ggggataacgccgtta-tgctgggcatttc 238  Q
    || |||||||| ||| |||||||| ||||||   |||||| || ||||||||||| ||||||| |  || |||||||| ||||| | |||||||||||||    
T  12831 tatcggaaccacggccgagggcaggtagctatgaaacttgttgcggatagaatctcggaagactctgctgggggataatgccgtcattgctgggcatttc 12732  T
Q  239 agtgctgggt 248  Q
    ||||||||||    
T  12731 agtgctgggt 12722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 2529 - 2307
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || | |        |||||||||||||||||| |||  ||||||||||||  |||||    
T  2529 agacaagacattagagcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgttgttgggagacgtgtcggaa 2430  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||  ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||||||||| |||||||    
T  2429 ccaaagctgagggcaggtagatatacaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagggctgggt 2330  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || |||||||||    
T  2329 atgttgtagacattgcatctgtg 2307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 25946 - 26154
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||| |||| |||||||| |||||||||||||||||||| ||||| |||| |        |||||||||||||||||||||| ||||||||||||    
T  25946 gcagagacacacaaaacattggactattgggcacgtagtggctcatgctatatcacacattcttggaaatcctctttggagataacgtcgttgggagacg 26045  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat-gctgggcatttca 239  Q
    || ||||||||||||||||||||| ||||||| |||||||||||||| ||||||| ||||||| |  |||| |||||  |||| || |||||||||||||    
T  26046 tatcggaaccatggctgagggcaggtagctaagcaacttgctggggaaagaatctcggaagactccgctggagataataccgtcatcgctgggcatttca 26145  T
Q  240 gtgctgggt 248  Q
    ||| |||||    
T  26146 gtgttgggt 26154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 10791 - 10568
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata---------gaaatcctctttggagataacgccgttgggagacgtaccgga 147  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |         |||||||||||||||||| ||| |||||||||||||  ||||    
T  10791 agacaagacattagaatattgggcacgtagtggctcgtgctatattacacatttcttggaaatcctctttggagatgacgtcgttgggagacgtttcgga 10692  T
Q  148 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctggg 247  Q
    ||||||||||||| ||| ||||||  |||||||||||  |||||||||||||||||   |||||||| ||||||||| ||||||||||||||  ||||||    
T  10691 accatggctgaggacaggtagctatgcaacttgctggaaatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcaaagctggg 10592  T
Q  248 tacgtcgtagatatcgcatctgtg 271  Q
    || || ||||| || |||||||||    
T  10591 tatgttgtagacattgcatctgtg 10568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 50 - 222
Target Start/End: Complemental strand, 34151 - 33971
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgt 141  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||    
T  34151 cagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgt 34052  T
Q  142 accggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    | ||| ||||||||||||||||| ||||||  |||||||||| ||||||||||| || |||| | |||||| |||| ||||    
T  34051 atcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactctactgggaataatgccg 33971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 2561 - 2783
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  2561 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 2660  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggt 248  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| ||||||||| |||||||||||||||||||||||    
T  2661 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgggt 2760  T
Q  249 acgtcgtagatatcgcatctgtg 271  Q
    | || ||||| || | |||||||    
T  2761 atgttgtagacattgtatctgtg 2783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 271
Target Start/End: Complemental strand, 18582 - 18458
Alignment:
Q  147 aaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgg 246  Q
    |||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| ||||||||| |||||||||||||||||||||    
T  18582 aaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgg 18483  T
Q  247 gtacgtcgtagatatcgcatctgtg 271  Q
    ||| || ||||| || | |||||||    
T  18482 gtatgttgtagacattgtatctgtg 18458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 24353 - 24531
Alignment:
Q  52 gagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtac 143  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||||| |||||||||||| ||| ||||||||||||||     
T  24353 gagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaattctctttggagatgacgtcgttgggagacgtat 24452  T
Q  144 cggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  24453 cggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0792 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0792
Description:

Target: scaffold0792; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 3992 - 4173
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        || ||||||||||||||| ||| ||||||||||||    
T  3992 gcagagacagacaagacattggagtattgggcacgcagtggctcgtgctatattacacattcttggacatcctctttggagatgacgtcgttgggagacg 4091  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    || ||| ||||||||| ||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  4092 tatcgggaccatggctaagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 4173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 16391 - 16226
Alignment:
Q  106 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 205  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||   |||| |||||||||||| |||||  |||| |    
T  16391 gaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaactggctggggatagagtcttgagagactc 16292  T
Q  206 gactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctgtg 271  Q
     || ||||| ||||||||| ||||||||||||||||||||||||||| || || || |||||||||    
T  16291 caccggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtggacattgcatctgtg 16226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 9037 - 9214
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaaatcctctttggagataacgccgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |        || | || ||||||||||||||| ||| ||||||||||||    
T  9037 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggacatcctctttggagatgacgtcgttgggagacg 9136  T
Q  141 taccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataa 217  Q
    |  ||||||||||||||||||||| |||| |  |||||||| || ||||||||||| ||||||| | |||||| ||||    
T  9137 tgtcggaaccatggctgagggcaggtagccatgcaacttgcttgaggatagaatctcggaagactctactgggaataa 9214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 8325 - 8511
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| | |||    
T  8325 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 8424  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcat 235  Q
    ||| |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||   || ||||| || |||||| ||||||||||    
T  8425 ccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagactttaccggggacaatgccgttgtgctgggcat 8511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 40064 - 40181
Alignment:
Q  107 aaatcctctttggagataacgccgttgggagacgtaccggaaccatggctga-gggcagatagctaat-caacttgctggggatagaatcttggaagacc 204  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||| ||| |||| |||||||||||||||||||||| |||||||     
T  40064 aaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgaggggcaggtagttaatgcaacttgctggggatagaatctcggaagact 40163  T
Q  205 cgactggggataacgccg 222  Q
    | |||||| |||| ||||    
T  40164 ctactgggaataatgccg 40181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 12888 - 12715
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  ||| |    
T  12888 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggga 12789  T
Q  149 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    ||  |||||||||| | ||||||  |||||||||||||||||| |||||| |||| | |||||| |||| ||||    
T  12788 cctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactgggaataatgccg 12715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 6807 - 6741
Alignment:
Q  156 tgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 222  Q
    ||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  6807 tgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 6741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1635 times since January 2019
Visitors: 3233