View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0434_high_10 (Length: 248)

Name: NF0434_high_10
Description: NF0434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0434_high_10
NF0434_high_10
[»] chr6 (35 HSPs)
chr6 (1-222)||(22010630-22010851)
chr6 (1-225)||(14737507-14737731)
chr6 (1-225)||(14742367-14742590)
chr6 (1-225)||(28184435-28184659)
chr6 (1-218)||(11856902-11857122)
chr6 (1-225)||(28155501-28155725)
chr6 (1-225)||(6438430-6438654)
chr6 (1-225)||(6005348-6005572)
chr6 (1-225)||(16838675-16838899)
chr6 (72-225)||(33330375-33330529)
chr6 (72-225)||(33335872-33336026)
chr6 (73-166)||(5674771-5674865)
chr6 (72-166)||(5757479-5757575)
chr6 (72-166)||(21356036-21356132)
chr6 (72-156)||(10077176-10077262)
chr6 (72-166)||(5572241-5572338)
chr6 (72-155)||(31086485-31086570)
chr6 (72-156)||(4629954-4630040)
chr6 (72-166)||(31979513-31979610)
chr6 (50-154)||(22708996-22709102)
chr6 (84-166)||(21801344-21801429)
chr6 (72-166)||(22963700-22963796)
chr6 (72-166)||(23824597-23824693)
chr6 (62-117)||(5343471-5343527)
chr6 (93-166)||(18232867-18232942)
chr6 (72-154)||(5017482-5017566)
chr6 (72-135)||(31936587-31936651)
chr6 (76-135)||(12195515-12195575)
chr6 (63-135)||(5273203-5273276)
chr6 (76-135)||(4816231-4816291)
chr6 (76-135)||(19704567-19704627)
chr6 (76-135)||(20915356-20915416)
chr6 (76-135)||(26932562-26932622)
chr6 (76-135)||(29754709-29754769)
chr6 (76-135)||(33309110-33309170)
[»] chr5 (45 HSPs)
chr5 (1-218)||(43592209-43592427)
chr5 (1-218)||(27449744-27449962)
chr5 (1-218)||(27444900-27445118)
chr5 (1-218)||(43598654-43598872)
chr5 (1-218)||(43604146-43604364)
chr5 (1-218)||(43609638-43609856)
chr5 (1-225)||(15044617-15044840)
chr5 (1-218)||(1457099-1457316)
chr5 (1-218)||(31180145-31180362)
chr5 (1-218)||(30631337-30631555)
chr5 (5-225)||(28807505-28807724)
chr5 (1-225)||(37556553-37556778)
chr5 (1-225)||(37561375-37561600)
chr5 (1-225)||(2785306-2785530)
chr5 (35-225)||(33791278-33791471)
chr5 (39-204)||(33768145-33768314)
chr5 (2-225)||(31396921-31397146)
chr5 (33-218)||(24135809-24135996)
chr5 (33-166)||(38192135-38192269)
chr5 (33-166)||(38219360-38219494)
chr5 (2-189)||(31401815-31402003)
chr5 (50-166)||(35387640-35387758)
chr5 (72-166)||(9353333-9353429)
chr5 (72-166)||(36932351-36932447)
chr5 (72-166)||(10281751-10281848)
chr5 (72-166)||(15464532-15464628)
chr5 (73-166)||(11916972-11917068)
chr5 (72-166)||(14520230-14520326)
chr5 (72-157)||(17003970-17004057)
chr5 (72-166)||(3880299-3880396)
chr5 (75-166)||(12084176-12084269)
chr5 (72-166)||(19588746-19588843)
chr5 (72-154)||(28832259-28832343)
chr5 (72-154)||(42127423-42127507)
chr5 (76-135)||(4410241-4410301)
chr5 (72-151)||(31300612-31300693)
chr5 (76-135)||(15552464-15552524)
chr5 (76-135)||(31179371-31179431)
chr5 (76-135)||(31542953-31543013)
chr5 (76-135)||(31545299-31545359)
chr5 (76-129)||(27910675-27910729)
chr5 (76-135)||(3373137-3373197)
chr5 (76-135)||(10749919-10749979)
chr5 (76-135)||(15354575-15354635)
chr5 (72-154)||(24553520-24553603)
[»] chr2 (44 HSPs)
chr2 (1-216)||(44312563-44312778)
chr2 (1-225)||(39811919-39812142)
chr2 (1-225)||(32246715-32246942)
chr2 (2-218)||(11098875-11099091)
chr2 (2-212)||(14291421-14291631)
chr2 (1-225)||(19344351-19344576)
chr2 (1-225)||(19349209-19349434)
chr2 (2-212)||(9296355-9296565)
chr2 (33-166)||(25398457-25398591)
chr2 (50-166)||(3491729-3491846)
chr2 (33-166)||(25403595-25403729)
chr2 (72-157)||(8040060-8040147)
chr2 (50-154)||(40738822-40738926)
chr2 (75-166)||(13569331-13569425)
chr2 (72-166)||(21629944-21630040)
chr2 (72-166)||(28259178-28259274)
chr2 (72-166)||(10445444-10445541)
chr2 (72-166)||(17865203-17865300)
chr2 (72-166)||(20522220-20522317)
chr2 (72-166)||(34682334-34682431)
chr2 (73-166)||(34388859-34388955)
chr2 (72-166)||(14699008-14699104)
chr2 (102-166)||(25407653-25407718)
chr2 (73-166)||(10707252-10707348)
chr2 (75-166)||(8390150-8390244)
chr2 (72-157)||(31056044-31056131)
chr2 (72-166)||(33528621-33528718)
chr2 (72-166)||(39482931-39483028)
chr2 (72-166)||(23078471-23078567)
chr2 (72-166)||(42039670-42039766)
chr2 (72-157)||(16940219-16940306)
chr2 (72-157)||(17010884-17010971)
chr2 (72-156)||(33118136-33118222)
chr2 (72-155)||(36757774-36757859)
chr2 (62-135)||(2838063-2838136)
chr2 (75-135)||(1345574-1345635)
chr2 (76-135)||(35215586-35215646)
chr2 (76-135)||(35217963-35218023)
chr2 (93-155)||(27149306-27149369)
chr2 (75-155)||(2869705-2869787)
chr2 (76-132)||(45332181-45332238)
chr2 (76-135)||(23452237-23452297)
chr2 (76-135)||(36558864-36558924)
chr2 (76-135)||(36561141-36561201)
[»] chr8 (33 HSPs)
chr8 (1-218)||(7289863-7290081)
chr8 (1-218)||(25328216-25328433)
chr8 (1-218)||(6311228-6311445)
chr8 (1-225)||(39784754-39784978)
chr8 (2-212)||(33037761-33037970)
chr8 (2-218)||(36979310-36979526)
chr8 (2-222)||(18853111-18853332)
chr8 (2-222)||(18870505-18870726)
chr8 (2-212)||(4760029-4760240)
chr8 (2-218)||(30655574-30655795)
chr8 (2-212)||(10689097-10689307)
chr8 (1-225)||(35745322-35745546)
chr8 (35-225)||(10684194-10684388)
chr8 (50-166)||(1261955-1262073)
chr8 (50-154)||(26287879-26287985)
chr8 (50-154)||(26301136-26301242)
chr8 (50-154)||(26313130-26313236)
chr8 (50-166)||(31071230-31071349)
chr8 (72-157)||(26403240-26403327)
chr8 (72-166)||(4456028-4456124)
chr8 (37-166)||(7412305-7412437)
chr8 (72-166)||(19175755-19175851)
chr8 (72-166)||(23799577-23799674)
chr8 (72-154)||(4696609-4696693)
chr8 (75-166)||(6127224-6127318)
chr8 (74-135)||(9765852-9765914)
chr8 (72-166)||(5702483-5702580)
chr8 (72-154)||(19752407-19752491)
chr8 (76-135)||(43079877-43079937)
chr8 (76-135)||(43082248-43082308)
chr8 (72-138)||(6813683-6813750)
chr8 (102-135)||(18810982-18811015)
chr8 (76-135)||(44721118-44721178)
[»] chr4 (38 HSPs)
chr4 (1-218)||(51520387-51520605)
chr4 (1-218)||(9224344-9224561)
chr4 (2-225)||(45357227-45357450)
chr4 (1-218)||(9229131-9229348)
chr4 (2-225)||(45347747-45347971)
chr4 (1-199)||(56146667-56146866)
chr4 (5-225)||(3813959-3814177)
chr4 (1-225)||(18855656-18855880)
chr4 (2-218)||(24741873-24742089)
chr4 (5-225)||(5732596-5732818)
chr4 (2-166)||(29760574-29760737)
chr4 (50-154)||(28468542-28468647)
chr4 (50-166)||(31985635-31985752)
chr4 (72-166)||(10047379-10047476)
chr4 (72-166)||(39245994-39246091)
chr4 (72-166)||(36315230-36315326)
chr4 (72-166)||(36329439-36329535)
chr4 (72-166)||(16623293-16623390)
chr4 (72-166)||(5396672-5396768)
chr4 (72-157)||(38152449-38152536)
chr4 (72-166)||(3796519-3796616)
chr4 (73-156)||(5143260-5143345)
chr4 (72-154)||(5269204-5269288)
chr4 (73-156)||(5147678-5147763)
chr4 (73-166)||(3777550-3777645)
chr4 (72-157)||(24333809-24333896)
chr4 (77-157)||(6743425-6743507)
chr4 (76-166)||(16630680-16630773)
chr4 (76-135)||(16931789-16931849)
chr4 (76-135)||(16934143-16934203)
chr4 (76-135)||(22780373-22780433)
chr4 (76-135)||(44599838-44599898)
chr4 (93-166)||(39774305-39774380)
chr4 (72-156)||(54867184-54867269)
chr4 (76-135)||(6765117-6765177)
chr4 (76-135)||(7941596-7941656)
chr4 (76-135)||(18709164-18709224)
chr4 (76-135)||(22782738-22782798)
[»] chr3 (54 HSPs)
chr3 (1-218)||(22173132-22173349)
chr3 (1-218)||(28503812-28504021)
chr3 (2-222)||(7167176-7167397)
chr3 (5-225)||(18656366-18656588)
chr3 (5-212)||(8739017-8739224)
chr3 (5-212)||(9091255-9091462)
chr3 (5-166)||(2671587-2671747)
chr3 (12-166)||(40372796-40372949)
chr3 (72-225)||(2672861-2673015)
chr3 (72-225)||(2677017-2677171)
chr3 (57-225)||(8512202-8512372)
chr3 (57-225)||(8517082-8517252)
chr3 (33-166)||(8477324-8477458)
chr3 (1-225)||(24968038-24968262)
chr3 (35-189)||(32475446-32475603)
chr3 (115-218)||(28501645-28501750)
chr3 (35-189)||(32480304-32480461)
chr3 (72-166)||(26928592-26928687)
chr3 (50-166)||(1305927-1306044)
chr3 (50-166)||(32143299-32143417)
chr3 (72-166)||(8370477-8370573)
chr3 (72-166)||(27974943-27975039)
chr3 (72-166)||(18552873-18552970)
chr3 (72-166)||(16264350-16264446)
chr3 (72-166)||(21711223-21711319)
chr3 (72-166)||(27452958-27453054)
chr3 (72-154)||(27986449-27986533)
chr3 (73-166)||(36029094-36029190)
chr3 (75-166)||(1736295-1736389)
chr3 (72-166)||(30709780-30709877)
chr3 (72-154)||(33386669-33386753)
chr3 (72-166)||(3715992-3716089)
chr3 (72-166)||(40592772-40592869)
chr3 (72-166)||(48438214-48438311)
chr3 (72-166)||(6794704-6794800)
chr3 (72-166)||(25795781-25795878)
chr3 (72-166)||(26298988-26299085)
chr3 (72-154)||(1417493-1417577)
chr3 (72-120)||(10207935-10207983)
chr3 (72-166)||(47923896-47923993)
chr3 (72-154)||(37466291-37466375)
chr3 (72-154)||(39039995-39040079)
chr3 (72-166)||(40844652-40844748)
chr3 (72-154)||(3328359-3328443)
chr3 (72-138)||(4386947-4387014)
chr3 (72-166)||(24695154-24695251)
chr3 (76-135)||(38210569-38210629)
chr3 (76-135)||(50494198-50494258)
chr3 (76-139)||(53894055-53894119)
chr3 (93-154)||(3323693-3323755)
chr3 (76-135)||(458483-458543)
chr3 (76-135)||(6063444-6063504)
chr3 (76-135)||(10621528-10621588)
chr3 (72-119)||(39153357-39153405)
[»] chr1 (35 HSPs)
chr1 (5-225)||(41398176-41398390)
chr1 (5-225)||(41390521-41390735)
chr1 (1-225)||(25445020-25445245)
chr1 (2-218)||(24787312-24787528)
chr1 (1-225)||(39445429-39445653)
chr1 (1-225)||(1054943-1055167)
chr1 (1-225)||(44023805-44024028)
chr1 (55-225)||(43988392-43988566)
chr1 (33-166)||(24202770-24202904)
chr1 (36-166)||(19361433-19361564)
chr1 (36-166)||(19380073-19380204)
chr1 (36-166)||(19358844-19358975)
chr1 (72-166)||(26644898-26644994)
chr1 (72-157)||(47703946-47704033)
chr1 (72-166)||(19072928-19073025)
chr1 (72-166)||(19120818-19120915)
chr1 (72-166)||(16124516-16124613)
chr1 (72-166)||(27104372-27104469)
chr1 (72-166)||(3281708-3281804)
chr1 (72-157)||(9476261-9476348)
chr1 (72-157)||(13598398-13598485)
chr1 (72-157)||(29651811-29651898)
chr1 (72-164)||(37069770-37069864)
chr1 (72-157)||(775672-775759)
chr1 (37-166)||(21536570-21536702)
chr1 (72-166)||(13604624-13604720)
chr1 (72-154)||(47098837-47098921)
chr1 (72-154)||(32889439-32889523)
chr1 (176-225)||(25439827-25439875)
chr1 (75-135)||(47102874-47102935)
chr1 (76-135)||(9459419-9459479)
chr1 (76-135)||(9463246-9463306)
chr1 (76-135)||(16226386-16226446)
chr1 (76-135)||(23786058-23786118)
chr1 (76-135)||(51752582-51752642)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-218)||(34999-35216)
[»] chr7 (48 HSPs)
chr7 (1-218)||(12406262-12406479)
chr7 (1-218)||(12396842-12397059)
chr7 (1-225)||(24024257-24024482)
chr7 (1-225)||(31109514-31109738)
chr7 (1-225)||(19992242-19992467)
chr7 (5-161)||(4866665-4866820)
chr7 (2-212)||(20357501-20357711)
chr7 (2-212)||(2057892-2058108)
chr7 (1-225)||(21812169-21812394)
chr7 (35-225)||(24261253-24261447)
chr7 (35-225)||(24266132-24266326)
chr7 (35-189)||(16880034-16880192)
chr7 (35-189)||(16884890-16885048)
chr7 (33-166)||(21639770-21639904)
chr7 (50-166)||(1533445-1533563)
chr7 (72-166)||(18408764-18408859)
chr7 (33-166)||(21645968-21646102)
chr7 (72-166)||(18413641-18413735)
chr7 (73-156)||(21983285-21983370)
chr7 (72-166)||(29159803-29159900)
chr7 (72-166)||(46516310-46516407)
chr7 (72-166)||(49091661-49091758)
chr7 (72-166)||(44848685-44848781)
chr7 (72-166)||(2647696-2647793)
chr7 (72-166)||(33332450-33332547)
chr7 (72-154)||(9190021-9190105)
chr7 (72-154)||(20284089-20284173)
chr7 (72-166)||(55948-56044)
chr7 (72-154)||(2580390-2580474)
chr7 (72-155)||(35960816-35960901)
chr7 (72-154)||(9185178-9185262)
chr7 (72-151)||(47263678-47263757)
chr7 (72-155)||(2479337-2479421)
chr7 (72-166)||(4796667-4796764)
chr7 (75-135)||(28617258-28617319)
chr7 (73-156)||(21988909-21988992)
chr7 (76-135)||(31155911-31155971)
chr7 (76-135)||(1049296-1049356)
chr7 (76-135)||(2935497-2935557)
chr7 (76-135)||(3035953-3036013)
chr7 (72-135)||(5817303-5817366)
chr7 (76-135)||(7351652-7351712)
chr7 (72-119)||(8153466-8153514)
chr7 (76-135)||(9027194-9027254)
chr7 (76-135)||(22108295-22108355)
chr7 (76-135)||(22137306-22137366)
chr7 (76-135)||(40550055-40550115)
chr7 (76-135)||(40552333-40552393)
[»] scaffold0355 (2 HSPs)
scaffold0355 (1-225)||(9574-9794)
scaffold0355 (158-225)||(3779-3845)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-225)||(292-516)
[»] scaffold0197 (2 HSPs)
scaffold0197 (35-225)||(14239-14433)
scaffold0197 (1-225)||(19095-19319)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-225)||(2181-2405)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-225)||(148886-149110)
[»] scaffold0188 (2 HSPs)
scaffold0188 (33-166)||(17953-18087)
scaffold0188 (50-166)||(24046-24164)
[»] scaffold0009 (1 HSPs)
scaffold0009 (35-140)||(181980-182088)
[»] scaffold0140 (3 HSPs)
scaffold0140 (72-166)||(8420-8516)
scaffold0140 (76-135)||(22343-22403)
scaffold0140 (76-135)||(24618-24678)
[»] scaffold0978 (1 HSPs)
scaffold0978 (2-104)||(300-400)
[»] scaffold0036 (1 HSPs)
scaffold0036 (73-166)||(85684-85779)
[»] scaffold0087 (2 HSPs)
scaffold0087 (72-166)||(43962-44058)
scaffold0087 (37-166)||(36833-36965)
[»] scaffold0006 (3 HSPs)
scaffold0006 (72-157)||(5683-5770)
scaffold0006 (72-157)||(2492-2579)
scaffold0006 (72-166)||(133281-133377)
[»] scaffold0148 (1 HSPs)
scaffold0148 (72-166)||(10729-10826)
[»] scaffold0098 (1 HSPs)
scaffold0098 (72-154)||(45253-45337)
[»] scaffold0176 (1 HSPs)
scaffold0176 (75-166)||(17266-17360)
[»] scaffold0267 (1 HSPs)
scaffold0267 (76-135)||(269-329)
[»] scaffold0154 (1 HSPs)
scaffold0154 (102-135)||(11500-11533)
[»] scaffold0025 (1 HSPs)
scaffold0025 (76-135)||(69292-69352)


Alignment Details
Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 22010851 - 22010630
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010851 tagcaaaaccacacaaagagataccaaagca-aaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 22010753  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22010752 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 22010653  T
Q  200 ttagattctaccctttggtattt 222  Q
     |||||||||||||||| |||||    
T  22010652 ctagattctaccctttgatattt 22010630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 14737731 - 14737507
Alignment:
Q  1 tagcaaaaccacacaaa-gagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatat 99  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  14737731 tagcaaaaccacacaaaagagataccaaagca-aaacaagataagcggtaaaagaaagaacaaaacaccgagaagattgttgatccagttcagccaatat 14737633  T
Q  100 ggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14737632 ggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacatatgaacaaacc 14737533  T
Q  200 ttagattctaccctttggtattttcc 225  Q
     |||||||||||||||||||||||||    
T  14737532 ctagattctaccctttggtattttcc 14737507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 14742590 - 14742367
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14742590 tagcaaaaccacacaaagagatatcaaagca-aaacaagataagcggtaaaagaaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 14742492  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacct 200  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  14742491 acctaatttgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacatatgaacaaaccc 14742392  T
Q  201 tagattctaccctttggtattttcc 225  Q
    |||||||||||||||||||||||||    
T  14742391 tagattctaccctttggtattttcc 14742367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 28184435 - 28184659
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgagaagattgttgacccagttcagccaatat 99  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  28184435 tagcaaaaccacacaa-gagattccaaagcataaacaagataagcggtaaaaagaaagaacaaaacaccgagaagattgttgacccagttcagccaatat 28184533  T
Q  100 ggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacc 199  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28184534 ggcctaatctgggggagagagcagctctccaatctaatatgagaaagtgttacaaaaggttacaacactctagccttcaagctttacacatgaacaaacc 28184633  T
Q  200 ttagattctaccctttggtattttcc 225  Q
     |||||||||||||||||||||||||    
T  28184634 ctagattctaccctttggtattttcc 28184659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 11856902 - 11857122
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaa---caccgagaagattgttgacccagttcagccaat 97  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||   |||| ||||||||||||||||||||||||||||    
T  11856902 tagcaaaaccacacaaagagataccaaagca-aaacaagacaagcgataaaaggaagaacaaaaaaacaccaagaagattgttgacccagttcagccaat 11857000  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaa 196  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11857001 atggcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaa 11857100  T
Q  197 accttagattctaccctttggt 218  Q
    ||| ||||||||||||||||||    
T  11857101 accctagattctaccctttggt 11857122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 28155725 - 28155501
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||| ||||| || ||| ||||||||||||||| || |||| |||| ||||||||||||||  ||||||||||||||||||||||||||     
T  28155725 tagcaaaaccacactaagagctaacaa-gcataaacaagataaacggtaaatggaaagaacaaaacaccgaacaagattgttgacccagttcagccaatg 28155627  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaac 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||    
T  28155626 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaatttagctttcaagctttacacatgaacaaac 28155527  T
Q  199 cttagattctaccctttggtattttcc 225  Q
    | |||| ||||||||||||||||||||    
T  28155526 cctaga-tctaccctttggtattttcc 28155501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 6438430 - 6438654
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||    
T  6438430 tagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacaaaacaccgagcaagattgttgtcccagttcagccaata 6438528  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacatgaacaaa 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  6438529 tggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttgtcaagctttacacatgaacaaa 6438627  T
Q  198 ccttagattctaccctttggtattttcc 225  Q
    || ||||  |||||||||||||||||||    
T  6438628 ccctaga-actaccctttggtattttcc 6438654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 6005348 - 6005572
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaat 97  Q
    |||||||||||||| ||||| || ||| |||||  |||||||| ||||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||    
T  6005348 tagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaaggaaaagaacaaa-caccgagcaagattgttgacccagttcagccaat 6005443  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-cttcaagctttacacatgaaca 195  Q
     |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  6005444 gtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaaca 6005543  T
Q  196 aaccttagattctaccctttggtattttcc 225  Q
    |||| ||||  |||||||||||||||||||    
T  6005544 aaccctaga-cctaccctttggtattttcc 6005572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 16838675 - 16838899
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaat 97  Q
    |||||||||||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||||| ||||||| ||||||||||||||||||||||||||    
T  16838675 tagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaa-caccgagcaagattgttgacccagttcagccaat 16838770  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-cttcaagctttacacatgaaca 195  Q
     |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  16838771 gtggcttaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagctattcaagctttacacatgaaca 16838870  T
Q  196 aaccttagattctaccctttggtattttcc 225  Q
    |||| |||| ||||||||||||||||||||    
T  16838871 aaccctaga-tctaccctttggtattttcc 16838899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 33330529 - 33330375
Alignment:
Q  72 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 170  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  33330529 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 33330430  T
Q  171 agcct-tcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    ||| | |||||||||||||||||  ||||| |||| ||||||||||||||||||||    
T  33330429 agcttatcaagctttacacatgacaaaaccctaga-tctaccctttggtattttcc 33330375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 33336026 - 33335872
Alignment:
Q  72 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 170  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  33336026 aagattgttgacccagttcagccaatgtgacctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 33335927  T
Q  171 agcct-tcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    ||| | |||||||||||||||||  ||||| |||| ||||||||||||||||||||    
T  33335926 agcttatcaagctttacacatgacaaaaccctaga-tctaccctttggtattttcc 33335872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 5674865 - 5674771
Alignment:
Q  73 agattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  5674865 agattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 5674771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 5757575 - 5757479
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  5757575 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 5757479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 21356036 - 21356132
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||    
T  21356036 aagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttactaagagttacaaga 21356132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 10077262 - 10077176
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    ||||||||||||||| ||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  10077262 aagattgttgacccaattcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaa 10077176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 5572338 - 5572241
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||| ||| | |||||||| |||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  5572338 aagattgttgacccaattcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 5572241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 155
Target Start/End: Complemental strand, 31086570 - 31086485
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||||| ||||||||  ||||||| |||||||||||| |||||||||||| ||||| ||||||||||||||    
T  31086570 aagattgttgacccagttcagtccaatatgatctaatctaggggagagagcaactctccaatccactatgatgaaagtgttacaaa 31086485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 4629954 - 4630040
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    |||||||||||| |||||||| |||||||| |||||||| ||| ||||||||||||||||||||| || || |||||||||||||||    
T  4629954 aagattgttgactcagttcagtccaatatgacctaatctagggaagagagcagctctccaatccactaagatgaaagtgttacaaaa 4630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 31979513 - 31979610
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| | ||||||||||||||||||||| |||||||||| || || ||||||||| |||||| |||||||||    
T  31979513 aagattgttgacccagttcggtccaatatgacataatctgggggagagagcagccctccaatccactaagatgaaagtgttgcaaaagagttacaaga 31979610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 22708996 - 22709102
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaag 146  Q
    |||||||||||||| ||||| | || |||||||||| ||||| |  |||||||  ||||||||||||||||||||||||||||||||| ||||| |||||    
T  22708996 aaaggaagaacaaacacaccaaaaa-attgttgacctagttcggttcaatatgatctaatctgggggagagagcagctctccaatccactatgatgaaag 22709094  T
Q  147 tgttacaa 154  Q
    ||||||||    
T  22709095 tgttacaa 22709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 21801429 - 21801344
Alignment:
Q  84 ccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||||| || ||  ||||||||||||||| |||||||||    
T  21801429 ccagttcagtccaatatgacctaatctgggggagcgagcagctctccaatccactaagataaaagtgttacaaaagagttacaaga 21801344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 22963700 - 22963796
Alignment:
Q  72 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| |  ||||||| || ||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  22963700 aagattgttgacccagttcggtgcaatatgaccaaatctgggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 22963796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 23824693 - 23824597
Alignment:
Q  72 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| |  ||||||| || ||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  23824693 aagattgttgacccagttcggtgcaatatgaccaaatctgggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 23824597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 5343471 - 5343527
Alignment:
Q  62 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggaga 117  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  5343471 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctaggggaga 5343527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 18232867 - 18232942
Alignment:
Q  93 ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||| ||||||||||||||||||||| | ||||||| || ||||| |||||||||||||||| |||||||||    
T  18232867 ccaatatgacctaatctgggggagagagcaaccctccaattcactatgatgaaagtgttacaaaagagttacaaga 18232942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 5017566 - 5017482
Alignment:
Q  72 aagattgttgacccagttcagccaa-tatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | ||| |||| |||||||| |||||||||||| | |||||||| | ||||| |||||||||||||    
T  5017566 aagattgttgacccagttcggtcaaatatgacctaatctaggggagagagcaaccctccaatctactatgatgaaagtgttacaa 5017482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 31936587 - 31936651
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||| ||||| | |||||||| |||| |||||| ||||||||||||||||||||||    
T  31936587 aagattgttgacctagttcggtccaatatgacctagtctgggagagagagcagctctccaatcca 31936651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 12195515 - 12195575
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  12195515 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 12195575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 5273203 - 5273276
Alignment:
Q  63 aacaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||| |||||  ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  5273203 aacactgagaaatttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 5273276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 4816231 - 4816291
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  4816231 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 4816291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 19704567 - 19704627
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  19704567 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 19704627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 20915356 - 20915416
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  20915356 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 20915416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 26932562 - 26932622
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||| | ||||||||||    
T  26932562 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcaaccctccaatcca 26932622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 29754709 - 29754769
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  29754709 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 29754769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 33309170 - 33309110
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  33309170 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 33309110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 43592209 - 43592427
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592209 tagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 43592308  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43592309 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 43592408  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  43592409 ctagattctaccctttggt 43592427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 27449744 - 27449962
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27449744 tagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatata 27449843  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27449844 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 27449943  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  27449944 ctagattctaccctttggt 27449962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 27444900 - 27445118
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  27444900 tagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaaaacaccgagaagattgttgacccagttcaggcaatata 27444999  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27445000 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 27445099  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  27445100 ctagattctaccctttggt 27445118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 43598654 - 43598872
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  43598654 tagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaaaacaccgagaagattgttggtccagttcagccaatatg 43598753  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43598754 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 43598853  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  43598854 ctagattctaccctttggt 43598872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 43604146 - 43604364
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  43604146 tagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaaaacaccgagaagattgttggtccagttcagccaatatg 43604245  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43604246 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 43604345  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  43604346 ctagattctaccctttggt 43604364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 43609638 - 43609856
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  43609638 tagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaaaacaccgagaagattgttggtccagttcagccaatatg 43609737  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43609738 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 43609837  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  43609838 ctagattctaccctttggt 43609856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 15044617 - 15044840
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15044617 tagcaaaaccacacaa-gagattccaaagcataaacaagataagcaagaaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatg 15044715  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacct 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  15044716 gcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccc 15044815  T
Q  201 tagattctaccctttggtattttcc 225  Q
    |||||||||||||||||||||||||    
T  15044816 tagattctaccctttggtattttcc 15044840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 1457316 - 1457099
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  | ||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1457316 tagcaaaaccacacaaagagataacaaagcataaacaagataagaaagaaa-ggaagaacaaaacaccgagaagattgttgacccagttcagccaatgtg 1457218  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1457217 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 1457118  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  1457117 ctagattctaccctttggt 1457099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 31180145 - 31180362
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  | ||| | |||||||||||||| |||||||||||||||||||||||||||||||    
T  31180145 tagcaaaaccacacaaagagataacaaagcataaacaagataagaaagaaa-gaaagaacaaaacaccaagaagattgttgacccagttcagccaatatg 31180243  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaac 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||| | ||||||    
T  31180244 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaactctagccttcaagctttacacaag-acaaac 31180342  T
Q  199 cttagattctaccctttggt 218  Q
    | ||||||||||||||||||    
T  31180343 cctagattctaccctttggt 31180362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 30631337 - 30631555
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    |||||||| |||| | | ||||| ||||||||||||||||||||  | ||| |||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  30631337 tagcaaaatcacatatatagataacaaagcataaacaagataagtaagaaa-ggaagaacaaaacaccaagaagattgttgactcagttcagccaatgtg 30631435  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaac 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  30631436 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaactctagccttcaagctttacacatgaacaaac 30631535  T
Q  199 cttagattctaccctttggt 218  Q
    | ||||||||||||||||||    
T  30631536 catagattctaccctttggt 30631555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 28807724 - 28807505
Alignment:
Q  5 aaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaatatggc 102  Q
    |||||||| ||||||| || ||| ||||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  28807724 aaaaccactcaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacaaaacaccgagcaagattgttgacccagttcagccaatgtggc 28807626  T
Q  103 ctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacctta 202  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||    
T  28807625 ctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagaatctagctttcaagctttacacatgaacaaacccta 28807527  T
Q  203 gattctaccctttggtattttcc 225  Q
    || ||||||||||||||||||||    
T  28807526 ga-tctaccctttggtattttcc 28807505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 37556778 - 37556553
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||| ||||| || ||| ||||||||||||||| || |||| |||| ||||||||||||||| ||||||||||||||||||||||||||     
T  37556778 tagcaaaaccacactaagagctaacaa-gcataaacaagataaacggtaaatggaaagaacaaaacaccgagcaagattgttgacccagttcagccaatg 37556680  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacatgaacaaa 197  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  37556679 tggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagtatctagcttatcaagctttacacatgaacaaa 37556580  T
Q  198 ccttagattctaccctttggtattttcc 225  Q
    || ||||  |||||||||||||||||||    
T  37556579 ccctaga-actaccctttggtattttcc 37556553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 37561600 - 37561375
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||| ||||| || ||| ||||||||||||||| || |||| |||| ||||||||||||||| ||||||||||||||||||||||||||     
T  37561600 tagcaaaaccacactaagagctaacaa-gcataaacaagataaacggtaaatggaaagaacaaaacaccgagcaagattgttgacccagttcagccaatg 37561502  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacatgaacaaa 197  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  37561501 tggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagtatctagcttatcaagctttacacatgaacaaa 37561402  T
Q  198 ccttagattctaccctttggtattttcc 225  Q
    || ||||  |||||||||||||||||||    
T  37561401 ccctaga-actaccctttggtattttcc 37561375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 2785306 - 2785530
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaat 97  Q
    |||||||||||||| ||||| || ||| |||||  |||||||| ||||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||    
T  2785306 tagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaaggaaaagaacaaa-caccgagcaagattgttgacccagttcagccaat 2785401  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-cttcaagctttacacatgaaca 195  Q
     |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||| ||||||||    
T  2785402 gtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttactcatgaaca 2785501  T
Q  196 aaccttagattctaccctttggtattttcc 225  Q
    |||| ||||  |||||||||||||||||||    
T  2785502 aaccctaga-cctaccctttggtattttcc 2785530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 35 - 225
Target Start/End: Original strand, 33791278 - 33791471
Alignment:
Q  35 acaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||| ||||||||||||  ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  33791278 acaagataaacgataaaaggaaaagaacaaa-caccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggaaagagcagctctccaa 33791376  T
Q  132 tccaatatgagaaagtgttacaaaag-gttacaagactctagc-cttcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    ||||||||| ||| |||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  33791377 tccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctaga-cctaccctttggtattttcc 33791471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 39 - 204
Target Start/End: Original strand, 33768145 - 33768314
Alignment:
Q  39 gataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||| ||||||||||||  ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  33768145 gataaacgataaaaggaaaagaacaaa-caccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggggagagcagctctccaatcca 33768243  T
Q  136 atatgagaaagtgttacaaaag-gttacaagactctagc-cttcaagctttacacatgaacaaaccttaga 204  Q
    ||||| ||| |||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||| ||||    
T  33768244 atatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctaga 33768314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 31397146 - 31396921
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaaca-aaacaccgag-aagattgttgacccagttcagccaatat 99  Q
    ||||||||||||| ||||| || ||| |||||  |||||||| ||||||||| ||  | | |||||||||| |||||||||||||||||||||||||| |    
T  31397146 agcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacaaacaaacaccgagcaagattgttgacccagttcagccaatgt 31397050  T
Q  100 ggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacatg--aaca 195  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | |||||||||||||| |  || |    
T  31397049 ggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaa 31396950  T
Q  196 aaccttagattctaccctttggtattttcc 225  Q
    |||| |||| |||||||||||| |||||||    
T  31396949 aaccctaga-tctaccctttggcattttcc 31396921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 218
Target Start/End: Original strand, 24135809 - 24135996
Alignment:
Q  33 aaacaagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||||||| | ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24135809 aaacaagataagctagaaaaggaagaacaaacacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctatccaa 24135908  T
Q  132 tccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaaccttagattctaccctttggt 218  Q
    | || || || |||||||||||||| ||||||||| |   |||| | ||||| ||||||| ||||||  | ||||||||||||||||||    
T  24135909 tgcactaagatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagtcctagattctaccctttggt 24135996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 38192135 - 38192269
Alignment:
Q  33 aaacaagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||||||| | ||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38192135 aaacaagataagcaagaaa-ggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 38192233  T
Q  132 tccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||| ||||| |||||||||||||| ||||||||||    
T  38192234 tccactatgatgaaagtgttacaaagggttacaaga 38192269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 38219360 - 38219494
Alignment:
Q  33 aaacaagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||||||| | ||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38219360 aaacaagataagcaagaaa-ggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 38219458  T
Q  132 tccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||| ||||| |||||||||||||| ||||||||||    
T  38219459 tccactatgatgaaagtgttacaaagggttacaaga 38219494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 31402003 - 31401815
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    ||||||||||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||||| ||||||| ||||||||||||||||||||||||||     
T  31402003 agcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaa-caccgagcaagattgttgacccagttcagccaatg 31401908  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacaca 189  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||    
T  31401907 tggcctaatatgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacaca 31401815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 35387640 - 35387758
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagt 147  Q
    |||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  35387640 aaaggaagaacaaacacaccaaaaagattgttgacccaattcagccaatatggcctaatctgggggagagagcagctctccaatctactatgatgaaagt 35387739  T
Q  148 gttacaaaaggttacaaga 166  Q
    |||||||| ||||||||||    
T  35387740 gttacaaagggttacaaga 35387758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 9353429 - 9353333
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  9353429 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 9353333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 36932447 - 36932351
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  36932447 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 36932351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 10281751 - 10281848
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| ||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  10281751 aagattgttgacccagttcggtccaatatgacctgatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 10281848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 15464532 - 15464628
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  15464532 aagattgttgacccagttcggtccaatatgatctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 15464628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 11917068 - 11916972
Alignment:
Q  73 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||    
T  11917068 agattgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaaga 11916972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 14520230 - 14520326
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||| |||| |||||||||||| ||||||| ||||| ||||||||||||||  |||||||||    
T  14520230 aagattgttgacccagttcggtccaatatgacctaatctaggggggagagcagctcttcaatccactatgatgaaagtgttacaaagagttacaaga 14520326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 17004057 - 17003970
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||| ||||| |||||| || ||||||    
T  17004057 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctcttcaatccactatgatgaaagtatttcaaaag 17003970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 3880299 - 3880396
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||  |||||| | |||||||| ||||||||| || ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  3880299 aagattgttgattcagttctgtccaatatgacctaatctgaggcagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 3880396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 12084269 - 12084176
Alignment:
Q  75 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||||||||||||||| | ||| |||| |||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  12084269 attgttgacccagttcggtccactatgacctaatatggggcagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 12084176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 19588746 - 19588843
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | ||||||||  |||||||  ||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  19588746 aagattgttgacccagttcggtccaatatgaactaatcttagggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 19588843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 28832259 - 28832343
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    |||||||||||||| |||| | |||||||| ||||||||||||||||||||||| |||||||||| || || |||||||||||||    
T  28832259 aagattgttgacccggttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 28832343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 42127507 - 42127423
Alignment:
Q  72 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | | |||||| ||||||||||||||||||||||| | |||||||| || || |||||||||||||    
T  42127507 aagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccccccaatccactaagatgaaagtgttacaa 42127423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 4410301 - 4410241
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||||||||||||||    
T  4410301 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagctctccaatcca 4410241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 151
Target Start/End: Complemental strand, 31300693 - 31300612
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgtta 151  Q
    ||||||||||||||||||| | |||||||| |||| |||| ||||||||| | |||||||||||| || || ||||||||||    
T  31300693 aagattgttgacccagttcggtccaatatgacctagtctgagggagagagaaactctccaatccactaagatgaaagtgtta 31300612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 15552524 - 15552464
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  15552524 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 15552464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 31179371 - 31179431
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  31179371 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 31179431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 31543013 - 31542953
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  31543013 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 31542953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 31545359 - 31545299
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  31545359 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 31545299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 27910729 - 27910675
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 129  Q
    ||||||||||||||| | ||||  || ||||||||||||||||||||||||||||    
T  27910729 ttgttgacccagttcggtccaaattgacctaatctgggggagagagcagctctcc 27910675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 3373137 - 3373197
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||| | ||||||||||    
T  3373137 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcaaccctccaatcca 3373197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 10749979 - 10749919
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  10749979 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 10749919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 15354575 - 15354635
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  15354575 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 15354635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 24553603 - 24553520
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||| ||||||| | |||||||| ||||||||  ||||||||||||| ||||| |||| || || |||||||||||||    
T  24553603 aagattgttgatccagttcggtccaatatgacctaatctatgggagagagcagc-ctccactccactaagatgaaagtgttacaa 24553520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 44312778 - 44312563
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44312778 tagcaaaaccacacaaagagataccaaagca-aaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 44312680  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44312679 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 44312580  T
Q  200 ttagattctaccctttg 216  Q
     ||||||||||||||||    
T  44312579 ctagattctaccctttg 44312563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 39812142 - 39811919
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  39812142 tagcaaaaccacacaa-gagattccaaagcacaaacaagataagcggtaaaagaaagaacaaaacaccgagaagattgttgaaccagttcagccaatatg 39812044  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  39812043 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccc 39811944  T
Q  201 tagattctaccctttggtattttcc 225  Q
    |||||||||||||||||||||||||    
T  39811943 tagattctaccctttggtattttcc 39811919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 32246715 - 32246942
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagc---gataaaaggaagaacaaaacaccg-agaagattgttgacccagttcagccaa 96  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    | ||||||||||||||||||||| | |||||||||||||  ||||||||||    
T  32246715 tagcaaaaccacacaa-gagattccaaagcataaacaagataagcaagaaaaaaaggaagaacaaaacaccgaacaagattgttgaccttgttcagccaa 32246813  T
Q  97 tatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaa 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32246814 tatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaa 32246913  T
Q  197 accttagattctaccctttggtattttcc 225  Q
    ||| |||||| ||||||||||||||||||    
T  32246914 accctagattataccctttggtattttcc 32246942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 218
Target Start/End: Complemental strand, 11099091 - 11098875
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11099091 agcaaaaccacacaaagagataccaaagca-aaacaagataag-gaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatgg 11098994  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaac 198  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| | ||||| ||||||| ||||||||    
T  11098993 cctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagc-ttacacaagaacaaac 11098895  T
Q  199 cttagattctaccctttggt 218  Q
    | ||||||||||||||||||    
T  11098894 cctagattctaccctttggt 11098875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 2 - 212
Target Start/End: Original strand, 14291421 - 14291631
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||| ||||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14291421 agcaaaaccacacaaagagataacaaagca-aaacaagataagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatgg 14291518  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaac 198  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||||||||||| ||||||| |||||| |    
T  14291519 cctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagc 14291617  T
Q  199 cttagattctaccc 212  Q
    | ||||||||||||    
T  14291618 cctagattctaccc 14291631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 19344351 - 19344576
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaat 97  Q
    |||||||||||||| ||||| || ||| |||||  |||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  19344351 tagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaaggaaaagaacaaaacaccgagcaagattgttgacccagttcagccaat 19344447  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-cttcaagctttacacatgaaca 195  Q
     ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  19344448 gtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaaca 19344547  T
Q  196 aaccttagattctaccctttggtattttcc 225  Q
    |||| ||||  |||||||||||||||||||    
T  19344548 aaccctaga-cctaccctttggtattttcc 19344576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 19349209 - 19349434
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaat 97  Q
    |||||||||||||| ||||| || ||| |||||  |||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  19349209 tagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaaggaaaagaacaaaacaccgagcaagattgttgacccagttcagccaat 19349305  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-cttcaagctttacacatgaaca 195  Q
     ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  19349306 gtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaaca 19349405  T
Q  196 aaccttagattctaccctttggtattttcc 225  Q
    |||| ||||  |||||||||||||||||||    
T  19349406 aaccctaga-cctaccctttggtattttcc 19349434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 9296565 - 9296355
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||| ||||||| |||||||| |||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9296565 agcaaaaccacacaaagagataacaaagca-aaacaagaaaagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatgg 9296468  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaac 198  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||||||||||| ||| ||| |||||| |    
T  9296467 cctaatttgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttatacaagaacaagc 9296369  T
Q  199 cttagattctaccc 212  Q
    | ||||||||||||    
T  9296368 cctagattctaccc 9296355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 25398457 - 25398591
Alignment:
Q  33 aaacaagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||||||| | ||| ||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25398457 aaacaagataagcaagaaa-ggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatgacctaatctgggggagagagcagctctccaa 25398555  T
Q  132 tccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||| ||||| |||||||||||||| ||||||||||    
T  25398556 tccactatgatgaaagtgttacaaagggttacaaga 25398591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 3491729 - 3491846
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagt 147  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  3491729 aaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagt 3491827  T
Q  148 gttacaaaaggttacaaga 166  Q
    |||||||| ||||||||||    
T  3491828 gttacaaagggttacaaga 3491846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 25403595 - 25403729
Alignment:
Q  33 aaacaagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||||||| | ||| ||||||||||| ||||| | |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  25403595 aaacaagataagcaagaaa-ggaagaacaaacacaccaaaaagattgttgactcagttcagccaatatgacctaatctgggggagagagcagctctccaa 25403693  T
Q  132 tccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||| ||||| |||||||||||||| ||||||||||    
T  25403694 tccactatgatgaaagtgttacaaagggttacaaga 25403729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 8040060 - 8040147
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  8040060 aagattgttgacccagttcagtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 8040147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 40738822 - 40738926
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagt 147  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||||    
T  40738822 aaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatgacctaatctggggg-gagagcagctctccaatccactatgatgaaagt 40738919  T
Q  148 gttacaa 154  Q
    |||||||    
T  40738920 gttacaa 40738926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 166
Target Start/End: Original strand, 13569331 - 13569425
Alignment:
Q  75 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  13569331 attgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 13569425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 21629944 - 21630040
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  21629944 aagattgttgacccagttcagtccaatatgacctaatctgggg-agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 21630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 28259274 - 28259178
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  28259274 aagattgttgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 28259178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 10445541 - 10445444
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||    
T  10445541 aagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactattatgaaagtgttacaaaagagttacaaga 10445444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 17865203 - 17865300
Alignment:
Q  72 aagattgttgacccagttcagcc-aatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||||||| | |||||||||| ||||| |||||||||||||||| |||||||||    
T  17865203 aagattgttgacccagttcagtcgaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaaga 17865300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 20522220 - 20522317
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa-ggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||| | |||||||||| ||||| ||||||||||||||| ||||||||||    
T  20522220 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagggttacaaga 20522317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 34682431 - 34682334
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||    
T  34682431 aagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaaga 34682334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 166
Target Start/End: Original strand, 34388859 - 34388955
Alignment:
Q  73 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||||| ||| | |||||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||||||    
T  34388859 agattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 34388955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 14699104 - 14699008
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||||||||    
T  14699104 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaag-gttacaaaagagttacaaga 14699008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 25407653 - 25407718
Alignment:
Q  102 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  25407653 cctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaaga 25407718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 10707348 - 10707252
Alignment:
Q  73 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||||||||| | |||||||| |||||| ||||||||||| || |||||||||||| ||||| |||||||||||||||| |||||||||    
T  10707348 agattgttgacccagttcggtccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttacaaaagagttacaaga 10707252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 8390244 - 8390150
Alignment:
Q  75 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||||||| | |||| ||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||    
T  8390244 attgttgacccagttcggtccaaaatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaaga 8390150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 31056044 - 31056131
Alignment:
Q  72 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||| ||||| |  ||||||| |||||||| ||||||||||||||||||||||||| || || ||||||||||||||||    
T  31056044 aagattgttgacctagttcggttcaatatgacctaatctaggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 31056131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 33528718 - 33528621
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||| ||||  |||||||| | |||||||||| ||||| |||||||||||||||| |||||||||    
T  33528718 aagattgttgacccagttcggtccaatatgacctaatatgggaaagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaaga 33528621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 39482931 - 39483028
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||| ||||| | |||||||| |||||| |||||||||||||||  |||||||||| ||||| |||| ||||||||||| |||||||||    
T  39482931 aagattgttgacctagttcggtccaatatgacctaatatgggggagagagcaggcctccaatccactatgatgaaaatgttacaaaagagttacaaga 39483028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 23078567 - 23078471
Alignment:
Q  72 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||| |||||||||||||| | |||||||| |||||| ||||||||||| || |||||||||||| ||||| |||||||||| |||  |||||||||    
T  23078567 aagaatgttgacccagttcgatccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttagaaagagttacaaga 23078471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 42039766 - 42039670
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||| | ||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||||| ||||||||||| ||  |||||||||    
T  42039766 aagattgttgatctagttcggtccaatatgacctaatctgtgggagagagcagctctctaatccactatgatgaaagtgttacgaagagttacaaga 42039670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 16940306 - 16940219
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||| ||| | |||||||| | |||||||||||| ||| |||| |||||||||| ||||| ||||||||||||||||    
T  16940306 aagattgttgacccaattcggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaag 16940219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 17010971 - 17010884
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||| ||| | |||||||| | |||||||||||| ||| |||| |||||||||| ||||| ||||||||||||||||    
T  17010971 aagattgttgacccaattcggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaag 17010884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 33118136 - 33118222
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    |||||||||| | |||||| | |||||||| |||||| |||||||||||||||| |||||||||| ||||| ||||| |||||||||    
T  33118136 aagattgttggctcagttcggtccaatatgacctaatttgggggagagagcagccctccaatccactatgatgaaagagttacaaaa 33118222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 155
Target Start/End: Complemental strand, 36757859 - 36757774
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||| ||| | |||||||| ||||||||||||| || | ||||||||||||||| ||||| ||||||||| ||||    
T  36757859 aagattgttgacccaattcggtccaatatgacctaatctgggggggataacagctctccaatccagtatgatgaaagtgtttcaaa 36757774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 2838136 - 2838063
Alignment:
Q  62 aaacaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||| |||| |||||||||||||||| | |||||||| |||| ||||||||||||||||  |||||||||||    
T  2838136 aaacaccaagaa-attgttgacccagttcggtccaatatgacctactctgggggagagagcacatctccaatcca 2838063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 1345635 - 1345574
Alignment:
Q  75 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    |||||||||||||||| | |||||||| |||| |||||||||||||||| |||||| |||||    
T  1345635 attgttgacccagttcggtccaatatgacctactctgggggagagagcacctctccgatcca 1345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 35215586 - 35215646
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  35215586 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 35215646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 35217963 - 35218023
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  35217963 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 35218023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 27149369 - 27149306
Alignment:
Q  93 ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    |||||||| |||| | ||||||||||||||||||||||||||| ||| | ||||||| ||||||    
T  27149369 ccaatatgacctactatgggggagagagcagctctccaatccactataatgaaagtgatacaaa 27149306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 155
Target Start/End: Complemental strand, 2869787 - 2869705
Alignment:
Q  75 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    |||||| ||||||||| | |||||||| |||| ||| |||||||||| |||||||||||||| || || ||||||| ||||||    
T  2869787 attgtttacccagttcggtccaatatgacctactctaggggagagagtagctctccaatccactaagatgaaagtgatacaaa 2869705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 45332181 - 45332238
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaat 132  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||||||    
T  45332181 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaat 45332238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 23452237 - 23452297
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  23452237 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 23452297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 36558864 - 36558924
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  36558864 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 36558924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 36561141 - 36561201
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  36561141 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 36561201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 7290081 - 7289863
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7290081 tagcaaaaccacacaaagagataacaaaccataaacaagataagtgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 7289982  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7289981 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 7289882  T
Q  200 ttagattctaccctttggt 218  Q
     || |||||||||||||||    
T  7289881 ctatattctaccctttggt 7289863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 25328433 - 25328216
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgagaagattgttgacccagttcagccaatat 99  Q
    |||||||||||||||| ||||||||||| ||||||| |||||| || |||| | || |||||||||||||||||||||||||||||||||||||||||||    
T  25328433 tagcaaaaccacacaa-gagataccaaaacataaacgagataaacggtaaaggaaaagaacaaaacaccgagaagattgttgacccagttcagccaatat 25328335  T
Q  100 ggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25328334 ggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacc 25328235  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  25328234 ctagattctaccctttggt 25328216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 6311228 - 6311445
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    |||||||||||||| |||||||| ||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6311228 tagcaaaaccacactaagagataacaaagcataaacaagataagcaagaaa-ggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 6311326  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaac 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| | ||||||    
T  6311327 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaag-acaaac 6311425  T
Q  199 cttagattctaccctttggt 218  Q
    | ||||||||||||||||||    
T  6311426 cctagattctaccctttggt 6311445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 39784978 - 39784754
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  39784978 tagcaaaaccacacaa-gagattccaaagcacaaacaagataagcggtaaaaggaaagaacaaaacaccgagcaagattgttgacccagttcagccaata 39784880  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacatgaacaaa 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  39784879 tggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaa 39784781  T
Q  198 ccttagattctaccctttggtattttcc 225  Q
    || ||||  |||||||||||||||||||    
T  39784780 ccctaga-actaccctttggtattttcc 39784754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 33037970 - 33037761
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  33037970 agcaaaaccacacaaagagataccaaagca-aaacaagataagcaagaaaag-aagaacaaaacaccaagaagattgttgacccagttcagccaatatgg 33037873  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaacc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||  |||||||||||| ||||||| |||||||||    
T  33037872 cctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaacc 33037774  T
Q  200 ttagattctaccc 212  Q
     ||||||||||||    
T  33037773 ctagattctaccc 33037761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 218
Target Start/End: Original strand, 36979310 - 36979526
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36979310 agcaaaaccacacaaagagataccaaagca-aaacaagataagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatgg 36979407  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaac 198  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||||||||||| ||||||| ||||||||    
T  36979408 cctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaac 36979506  T
Q  199 cttagattctaccctttggt 218  Q
    | ||||||||||||||||||    
T  36979507 cctagattctaccctttggt 36979526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 18853332 - 18853111
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18853332 agcaaaaccacacaaagagataccaaagca-aaacaagataagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatgg 18853235  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa-ggttacaag--actctagccttcaagctttacacatgaacaaa 197  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||  ||  |||| ||||||| ||||||| |||||||    
T  18853234 cctaatctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaacaatagcattcaagc-ttacacaagaacaaa 18853136  T
Q  198 ccttagattctaccctttggtattt 222  Q
    || |||||| |||||||||||||||    
T  18853135 ccctagattttaccctttggtattt 18853111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 18870726 - 18870505
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||| |||||||||||||||||||||| |||||||||    
T  18870726 agcaaaaccacacaaagagataccaaagca-aaacaagataagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcatccaatatgg 18870629  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa-ggttacaag--actctagccttcaagctttacacatgaacaaa 197  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||  ||  |||| ||||||| ||||||| |||||||    
T  18870628 cctaatctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaacaatagcattcaagc-ttacacaagaacaaa 18870530  T
Q  198 ccttagattctaccctttggtattt 222  Q
    || ||||||||||||||||||||||    
T  18870529 ccctagattctaccctttggtattt 18870505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 4760240 - 4760029
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  4760240 agcaaaaccacacaaagagataacaaagcataaacaagataagcaagaaa-ggaagaacaaaacatcaagaagattgttgacccagttcagccaatatgg 4760142  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaac 198  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||||||||||| ||||||| |||||| |    
T  4760141 cctaatatgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagc 4760043  T
Q  199 cttagattctaccc 212  Q
    | ||||||||||||    
T  4760042 cctagattctaccc 4760029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 218
Target Start/End: Original strand, 30655574 - 30655795
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaa----caccgagaagattgttgacccagttcagccaat 97  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| | ||| ||||||||||||    |||| ||||||||||||||||||||||||||||    
T  30655574 agcaaaaccacacatagagataacaaagcataaacaagataagcaagaaa-ggaagaacaaaaaaaacaccaagaagattgttgacccagttcagccaat 30655672  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaac 194  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||  ||  |||||||||||| ||||||| ||||    
T  30655673 atggcctaatctgggggagagagcagctctccaatctaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaac 30655771  T
Q  195 aaaccttagattctaccctttggt 218  Q
    ||||| ||||||||||||||||||    
T  30655772 aaaccctagattctaccctttggt 30655795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 10689307 - 10689097
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||  | ||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10689307 agcaaaaccacacaaagagataccaaagca-aaacaagataagtaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatgg 10689210  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaac 198  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||  ||  |||||||||||| ||||||| |||||| |    
T  10689209 cctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacagagggttacaagaaacaatagccttcaagc-ttacacaagaacaagc 10689111  T
Q  199 cttagattctaccc 212  Q
    | ||||||||||||    
T  10689110 cctagattctaccc 10689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 35745322 - 35745546
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaat 97  Q
    |||||||||||||| ||||| || ||| |||||  |||||||| ||||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||    
T  35745322 tagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaaggaaaagaacaaa-caccgagcaagattgttgacccagttcagccaat 35745417  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-cttcaagctttacacatgaaca 195  Q
     |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  35745418 gtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaaca 35745517  T
Q  196 aaccttagattctaccctttggtattttcc 225  Q
    |||| ||||  |||||||||||||||||||    
T  35745518 aaccctaga-cctaccctttggtattttcc 35745546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 10684388 - 10684194
Alignment:
Q  35 acaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||| ||||||||| ||  |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10684388 acaagataaacgataaaagaaaacgaacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaa 10684289  T
Q  132 tccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    ||||||||| ||| |||||||||||| ||||||||| |||||| | |||||||||||||| ||  ||||| ||||  ||||||||||||| |||||    
T  10684288 tccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctaga-cctaccctttggtaatttcc 10684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 1262073 - 1261955
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagt 147  Q
    |||||||||||||| ||||| | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  1262073 aaaggaagaacaaacacaccaaaaagattgttgacccagttcaaccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagt 1261974  T
Q  148 gttacaaaaggttacaaga 166  Q
    |||||||| ||||||||||    
T  1261973 gttacaaagggttacaaga 1261955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 26287879 - 26287985
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagt 147  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  26287879 aaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagt 26287978  T
Q  148 gttacaa 154  Q
    |||||||    
T  26287979 gttacaa 26287985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 26301136 - 26301242
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagt 147  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  26301136 aaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagt 26301235  T
Q  148 gttacaa 154  Q
    |||||||    
T  26301236 gttacaa 26301242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 26313130 - 26313236
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagt 147  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  26313130 aaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagt 26313229  T
Q  148 gttacaa 154  Q
    |||||||    
T  26313230 gttacaa 26313236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 31071349 - 31071230
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaag 146  Q
    |||||||||||||| ||||| | ||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| |||||    
T  31071349 aaaggaagaacaaacacaccaaaaagattgttgaccgagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaag 31071250  T
Q  147 tgttacaaaaggttacaaga 166  Q
    ||||||||| ||||||||||    
T  31071249 tgttacaaagggttacaaga 31071230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 26403327 - 26403240
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  26403327 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 26403240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 4456028 - 4456124
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||| |||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  4456028 aagattgctgacccggttcggtccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 4456124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 7412305 - 7412437
Alignment:
Q  37 aagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcc 134  Q
    ||||||||| || |||| | ||||||| |||||  ||| |||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||    
T  7412305 aagataagcaatgaaagaaggaacaaacacaccatgaaaattgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatcc 7412404  T
Q  135 aatatga-gaaagtgttacaaaaggttacaaga 166  Q
    | ||||| ||||||||||||||  |||||||||    
T  7412405 actatgatgaaagtgttacaaagagttacaaga 7412437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 19175851 - 19175755
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||| ||||| | |||||||| ||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||  |||||||||    
T  19175851 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaagagttacaaga 19175755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 23799674 - 23799577
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||| ||| |||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  23799674 aagattgttgacccagttcggtccaatatgacctaatttggaggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 23799577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 4696693 - 4696609
Alignment:
Q  72 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||    
T  4696693 aagattgttgacccagttcgatccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagagttacaa 4696609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 166
Target Start/End: Original strand, 6127224 - 6127318
Alignment:
Q  75 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||| |||||| | |||||||| |||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  6127224 attgttgactcagttcggtccaatatgacctaatttggggaagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 6127318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 9765914 - 9765852
Alignment:
Q  74 gattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||    
T  9765914 gattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatcca 9765852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 5702580 - 5702483
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||| |||||||||||||| | |||||||||  ||||| |||||||||||||||| |||||||||    
T  5702580 aagattgttgacccagttcggtccaatatgacctaatatgggggagagagcatccctccaatcccctatgatgaaagtgttacaaaagagttacaaga 5702483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 19752491 - 19752407
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||| ||||| | |||||||| |||| ||| ||||||||||||||||||||||||| || || |||||||||||||    
T  19752491 aagattgttgacctagttcggtccaatatgacctagtctaggggagagagcagctctccaatccactaagatgaaagtgttacaa 19752407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 43079937 - 43079877
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  43079937 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 43079877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 43082308 - 43082248
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  43082308 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 43082248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 6813683 - 6813750
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaata 138  Q
    ||||||||| ||||||||| | |||||||  ||||  || ||||||||||||||||||||||||||||    
T  6813683 aagattgttaacccagttcggtccaatataacctacactaggggagagagcagctctccaatccaata 6813750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 18811015 - 18810982
Alignment:
Q  102 cctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||||||||||| ||||||||||    
T  18811015 cctaatctgggggagagagcagccctccaatcca 18810982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 44721178 - 44721118
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||  || |||| |||| ||||||||||||||||||||||||    
T  44721178 ttgttgacccagttcggtccaaattgacctagtctgcgggagagagcagctctccaatcca 44721118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 51520387 - 51520605
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51520387 tagcaaaaccatacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaaaacaccgagaagattgttgacccagttctgccaatatg 51520486  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51520487 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 51520586  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  51520587 ctagattctaccctttggt 51520605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 9224561 - 9224344
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9224561 tagcaaaaccacacaaagagataccaaagca-aaacaagataagcggtaaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 9224463  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  9224462 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaactctagccttcaagctttacacatgaacaaacc 9224363  T
Q  200 ttagattctaccctttggt 218  Q
     |||| |||||||||||||    
T  9224362 ctagactctaccctttggt 9224344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 45357450 - 45357227
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45357450 agcaaaaccacacaa-gagattccaaagcacaaacaagataagcggtaaaaggaaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 45357352  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacct 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  45357351 gcataatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccc 45357252  T
Q  201 tagattctaccctttggtattttcc 225  Q
    |||||||||||||||||||||||||    
T  45357251 tagattctaccctttggtattttcc 45357227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 9229348 - 9229131
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9229348 tagcaaaaccacacaaagagataccaaagca-aaacaagataagcggtaaaaggaagaacaaaacaccgagaagattgttaacccagttcagccaatatg 9229250  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  9229249 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaactctagccttcaagctttacacatgaacaaacc 9229150  T
Q  200 ttagattctaccctttggt 218  Q
     |||| |||||||||||||    
T  9229149 ctagactctaccctttggt 9229131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 45347971 - 45347747
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45347971 agcaaaaccacacaa-gagattccaaagcacaaacaagataagcggtaaaaggaaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 45347873  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacatgaacaaacc 199  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45347872 gcttaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagacctctagccttcaagctttacacatgaacaaacc 45347773  T
Q  200 ttagattctaccctttggtattttcc 225  Q
     |||||||||||||||||||||||||    
T  45347772 ctagattctaccctttggtattttcc 45347747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 56146866 - 56146667
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  56146866 tagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaaaacaccgagaagattgttggtccagttcagccaatatg 56146767  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  56146766 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 56146667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 3813959 - 3814177
Alignment:
Q  5 aaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgag-aagattgttgacccagttcagccaatatggcc 103  Q
    |||||||||||||||| || ||| ||||||||||||||||| | ||| ||||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  3813959 aaaaccacacaaagagctaacaa-gcataaacaagataagcaagaaa-ggaagaacaaaacaccatgcaagattgttgacccagttcagccaatatggcc 3814056  T
Q  104 taatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccttag 203  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  3814057 taatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccctag 3814156  T
Q  204 attctaccctttggtattttcc 225  Q
    | ||||||||||||||||||||    
T  3814157 a-tctaccctttggtattttcc 3814177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 18855656 - 18855880
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  18855656 tagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacaaaacaccgagcaagattgttgacccagttcagccaata 18855754  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacatgaacaaa 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  18855755 tggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaa 18855853  T
Q  198 ccttagattctaccctttggtattttcc 225  Q
    || ||||  |||||||||||||||||||    
T  18855854 ccctaga-actaccctttggtattttcc 18855880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 218
Target Start/End: Original strand, 24741873 - 24742089
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24741873 agcaaaaccacacaaagagataccaaagca-aaacaagataagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatgg 24741970  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaac 198  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||||||||||| ||||||| ||||||||    
T  24741971 cctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaac 24742069  T
Q  199 cttagattctaccctttggt 218  Q
    | ||||||||||||||||||    
T  24742070 cctagattctaccctttggt 24742089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 5732596 - 5732818
Alignment:
Q  5 aaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaa----caccgag-aagattgttgacccagttcagccaatat 99  Q
    |||||||||||||||| || |||||||  |||||||||| || |||| | ||||||||||    ||| ||  ||||||||||||||||||||||||||||    
T  5732596 aaaaccacacaaagagctaacaaagca--aacaagataaacggtaaaggaaagaacaaaaaaaacactgaacaagattgttgacccagttcagccaatat 5732693  T
Q  100 ggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5732694 ggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaacc 5732793  T
Q  200 ttagattctaccctttggtattttcc 225  Q
     |||| ||||||||||||||||||||    
T  5732794 ctaga-tctaccctttggtattttcc 5732818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 29760574 - 29760737
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||| | ||||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29760574 agcaaaaccacacaaagagagaacaaagca-aaacaagataagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatgg 29760671  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  29760672 cctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 29760737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 50 - 154
Target Start/End: Complemental strand, 28468647 - 28468542
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagt 147  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  28468647 aaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagt 28468549  T
Q  148 gttacaa 154  Q
    |||||||    
T  28468548 gttacaa 28468542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 31985752 - 31985635
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaag 146  Q
    |||||||||||||| ||||| | ||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||| ||||| |||||    
T  31985752 aaaggaagaacaaacacaccaa-aagattgttgacccagttcggtccaatatgacctaatctgggg-agagagcagctctccaatccactatgatgaaag 31985655  T
Q  147 tgttacaaaaggttacaaga 166  Q
    ||||||||| ||||||||||    
T  31985654 tgttacaaagggttacaaga 31985635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 10047379 - 10047476
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  10047379 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 10047476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 39245994 - 39246091
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  39245994 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 39246091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 36315326 - 36315230
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||| |||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  36315326 aagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 36315230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 36329535 - 36329439
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||| |||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  36329535 aagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 36329439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 16623390 - 16623293
Alignment:
Q  72 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| |  ||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  16623390 aagattgttgacccagttcggttcaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 16623293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 5396768 - 5396672
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||||| ||||||||||||||||||||||| ||||| ||||||||| ||||  |||||||||    
T  5396768 aagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttgcaaagagttacaaga 5396672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 38152536 - 38152449
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatat-gagaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  38152536 aagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactatggtgaaagtgttacaaaag 38152449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 3796616 - 3796519
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||| |||||||||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  3796616 aagattgttgacccagttccgtccaatatgacctaatatgggggagagagcaactctctaatccactatgatgaaagtgttacaaaagagttacaaga 3796519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 5143260 - 5143345
Alignment:
Q  73 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    |||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  5143260 agattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaacccactatgatgaaagtgttacaaaa 5143345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 5269288 - 5269204
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||| ||||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  5269288 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaa 5269204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 5147678 - 5147763
Alignment:
Q  73 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    |||||||||||||||||| | |||||||| |||||| |||||||| ||||||||||||| |||| ||||| |||||||||||||||    
T  5147678 agattgttgacccagttcggtccaatatgacctaatttgggggagggagcagctctccagtccattatgatgaaagtgttacaaaa 5147763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 166
Target Start/End: Original strand, 3777550 - 3777645
Alignment:
Q  73 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||||||||||||||||| | |||||||  |||||||| | |||||||| |||||||||||||| ||||| ||||||||||||||  |||||||||    
T  3777550 agattgttgacccagttcggtccaatataacctaatctagaggagagagtagctctccaatccactatgatgaaagtgttacaaagagttacaaga 3777645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 24333809 - 24333896
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||| || |||||| | |||||||| |||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  24333809 aagattgttaactcagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaacgtgttacaaaag 24333896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 6743507 - 6743425
Alignment:
Q  77 tgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||| | |||||||| ||||||||  ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  6743507 tgttgacccagttcggtccaatatgacctaatctacgggagagagcagccctccaatccactatgatgaaagtgttacaaaag 6743425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 166
Target Start/End: Complemental strand, 16630773 - 16630680
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||| ||||| | |||||||| | |||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  16630773 ttgttgacctagttcggtccaatatgacataatctggaggagagaacagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 16630680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 16931789 - 16931849
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  16931789 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 16931849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 16934143 - 16934203
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  16934143 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 16934203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 22780373 - 22780433
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  22780373 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 22780433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 44599838 - 44599898
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  44599838 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 44599898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 39774380 - 39774305
Alignment:
Q  93 ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaa-aggttacaaga 166  Q
    |||||||| |||| ||||||||| ||||||||||||||||||| ||  | ||||||| |||||| |||||||||||    
T  39774380 ccaatatgacctactctgggggatagagcagctctccaatccactaaaatgaaagtgatacaaataggttacaaga 39774305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 54867184 - 54867269
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    ||||||||||||||||||| | |||||||| |||| ||| |||||||||||||| || ||||| | ||||| |||| ||||||||||    
T  54867184 aagattgttgacccagttcggtccaatatgacctagtct-ggggagagagcagcccttcaatcaactatgatgaaaatgttacaaaa 54867269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 6765177 - 6765117
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  6765177 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 6765117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 7941656 - 7941596
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  7941656 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 7941596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 18709164 - 18709224
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||  ||||||||||    
T  18709164 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagtcctccaatcca 18709224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 22782738 - 22782798
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||| ||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  22782738 ttgttgatccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 22782798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 22173349 - 22173132
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22173349 tagcaaaaccacacaaagagataccaaagca-aaataagataagcggtaaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 22173251  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22173250 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 22173151  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  22173150 ctagattctaccctttggt 22173132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 28504021 - 28503812
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28504021 tagcaaaaccacacaaagagataacaaagcataaacaaga----------aaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 28503932  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaac 198  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||    
T  28503931 gcctaatctggggaagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaac 28503832  T
Q  199 cttagattctaccctttggt 218  Q
    | ||||||||||||||||||    
T  28503831 cctagattctaccctttggt 28503812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 7167176 - 7167397
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7167176 agcaaaaccacacaaagagataacaaagcataaacaagataagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatgg 7167274  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaac 198  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||||||||||| ||||||| ||||||||    
T  7167275 cctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaac 7167373  T
Q  199 cttagattctaccctttggtattt 222  Q
    | ||||||||||||||||||||||    
T  7167374 cctagattctaccctttggtattt 7167397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 18656366 - 18656588
Alignment:
Q  5 aaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaa----caccgag-aagattgttgacccagttcagccaatat 99  Q
    |||||||||||||||| || |||||||  |||||||||| || |||| | ||||||||||    ||| ||  ||||||||||||||||||||||||||||    
T  18656366 aaaaccacacaaagagctaacaaagca--aacaagataaacggtaaaggaaagaacaaaaaaaacactgaacaagattgttgacccagttcagccaatat 18656463  T
Q  100 ggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18656464 ggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcattcaagctttacacatgaacaaacc 18656563  T
Q  200 ttagattctaccctttggtattttcc 225  Q
     |||| ||||||||||||||||||||    
T  18656564 ctaga-tctaccctttggtattttcc 18656588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 8739224 - 8739017
Alignment:
Q  5 aaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcct 104  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8739224 aaaaccacacaaagagataccaaagca-aaacaagataagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcct 8739127  T
Q  105 aatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaacctt 201  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||||||||||| ||||||| |||||| || |    
T  8739126 aatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaatccct 8739028  T
Q  202 agattctaccc 212  Q
    |||||||||||    
T  8739027 agattctaccc 8739017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 9091462 - 9091255
Alignment:
Q  5 aaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcct 104  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9091462 aaaaccacacaaagagataccaaagca-aaacaagataagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcct 9091365  T
Q  105 aatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaacctt 201  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||||||||||| ||||||| |||||| || |    
T  9091364 aatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaatccct 9091266  T
Q  202 agattctaccc 212  Q
    |||||||||||    
T  9091265 agattctaccc 9091255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 166
Target Start/End: Complemental strand, 2671747 - 2671587
Alignment:
Q  5 aaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcct 104  Q
    ||||||||||||||||||| ||||||| ||||||||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2671747 aaaaccacacaaagagataacaaagca-aaacaagataagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcct 2671650  T
Q  105 aatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  2671649 aatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 2671587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 40372949 - 40372796
Alignment:
Q  12 cacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgg 111  Q
    |||| ||||||| ||||||| ||||||||||||| | | | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40372949 cacatagagataacaaagca-aaacaagataagcaagata-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgg 40372852  T
Q  112 gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  40372851 gggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 40372796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 2673015 - 2672861
Alignment:
Q  72 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 170  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  2673015 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 2672916  T
Q  171 agcct-tcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    ||| | |||||||||||||||||  ||||| |||| ||||||||||||||||||||    
T  2672915 agcttatcaagctttacacatgacaaaaccctaga-tctaccctttggtattttcc 2672861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 2677171 - 2677017
Alignment:
Q  72 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 170  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  2677171 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 2677072  T
Q  171 agcct-tcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    ||| | |||||||||||||||||  ||||| |||| ||||||||||||||||||||    
T  2677071 agcttatcaagctttacacatgacaaaaccctaga-tctaccctttggtattttcc 2677017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 225
Target Start/End: Original strand, 8512202 - 8512372
Alignment:
Q  57 gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaa 155  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  8512202 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaa 8512301  T
Q  156 ag-gttacaagactctagcct-tcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    || ||||||||| |||||| | |||||||||||||| ||  ||||| ||||  ||||||||||||| |||||    
T  8512302 agagttacaagaatctagcttatcaagctttacacaagacaaaaccctaga-cctaccctttggtaatttcc 8512372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 225
Target Start/End: Original strand, 8517082 - 8517252
Alignment:
Q  57 gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaa 155  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  8517082 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaa 8517181  T
Q  156 ag-gttacaagactctagcct-tcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    || ||||||||| |||||| | |||||||||||||| ||  ||||| ||||  ||||||||||||| |||||    
T  8517182 agagttacaagaatctagcttatcaagctttacacaagacaaaaccctaga-cctaccctttggtaatttcc 8517252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 8477324 - 8477458
Alignment:
Q  33 aaacaagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||||||| | ||| | ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8477324 aaacaagataagcaagaaa-gaaagaacaaacacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 8477422  T
Q  132 tccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||||||||| |||||||||||||| ||||||||||    
T  8477423 tccaatatgatgaaagtgttacaaagggttacaaga 8477458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 24968038 - 24968262
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaat 97  Q
    |||||||||||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||||| ||||||| ||||||||||||||||||||||||||    
T  24968038 tagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaa-caccgagcaagattgttgacccagttcagccaat 24968133  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-cttcaagctttacacatgaaca 195  Q
     |||| |||| | |||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  24968134 gtggcttaattttggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagctattcaagctttacacatgaaca 24968233  T
Q  196 aaccttagattctaccctttggtattttcc 225  Q
    ||||  ||| |||||||||||||| |||||    
T  24968234 aacccgaga-tctaccctttggtactttcc 24968262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 189
Target Start/End: Original strand, 32475446 - 32475603
Alignment:
Q  35 acaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||| ||||||||| ||  |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32475446 acaagataaacgataaaagaaaacgaacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaa 32475545  T
Q  132 tccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacaca 189  Q
    ||||||||| ||| || |||||||  ||||||||| |||||| | ||||||||||||||    
T  32475546 tccaatatgtgaatgt-ttacaaagagttacaagaatctagcttatcaagctttacaca 32475603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 218
Target Start/End: Complemental strand, 28501750 - 28501645
Alignment:
Q  115 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaaccttagattctaccc 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  28501750 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattctaccc 28501651  T
Q  213 tttggt 218  Q
    ||||||    
T  28501650 tttggt 28501645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 189
Target Start/End: Original strand, 32480304 - 32480461
Alignment:
Q  35 acaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||| ||||||||| ||  |||||||||||| |  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32480304 acaagataaacgataaaagaaaacgaacaaaacaccaaccaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaa 32480403  T
Q  132 tccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacaca 189  Q
    ||||||||| ||| || |||||||  ||||||||| |||||| | ||||||||||||||    
T  32480404 tccaatatgtgaatgt-ttacaaagagttacaagaatctagcttatcaagctttacaca 32480461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 26928687 - 26928592
Alignment:
Q  72 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| ||||||||||    
T  26928687 aagattgttgacccagttcagccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaagggttacaaga 26928592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 1305927 - 1306044
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagt 147  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || ||||||    
T  1305927 aaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatggcctaatctaggggagatagcagctctccaatccactacgatgaaagt 1306025  T
Q  148 gttacaaaaggttacaaga 166  Q
    |||||||| ||||||||||    
T  1306026 gttacaaagggttacaaga 1306044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 32143299 - 32143417
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaag 146  Q
    |||||||||||||| ||||| | ||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| |||||    
T  32143299 aaaggaagaacaaacacaccaa-aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaag 32143397  T
Q  147 tgttacaaaaggttacaaga 166  Q
    ||||||||| ||||||||||    
T  32143398 tgttacaaagggttacaaga 32143417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 8370573 - 8370477
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  8370573 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 8370477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 27975039 - 27974943
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  27975039 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 27974943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 18552970 - 18552873
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  18552970 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 18552873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 16264350 - 16264446
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  16264350 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 16264446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 21711223 - 21711319
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||  |||||||||    
T  21711223 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaagagttacaaga 21711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 27452958 - 27453054
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||| ||||||| | |||||||| ||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  27452958 aagattgttgatccagttcggtccaatatgacctaatccgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaaga 27453054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 27986533 - 27986449
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  27986533 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 27986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 73 - 166
Target Start/End: Original strand, 36029094 - 36029190
Alignment:
Q  73 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||||||||| | |||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  36029094 agattgttgacccagttctgtccaatatgacctaatctgggggagaaagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 36029190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 1736389 - 1736295
Alignment:
Q  75 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  1736389 attgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 1736295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 30709877 - 30709780
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||| |||||||||    
T  30709877 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaattgttacaaaagagttacaaga 30709780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 33386753 - 33386669
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  33386753 aagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 33386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 3716089 - 3715992
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||| || |||||||||||||||||||| | ||||| |||||||||||||||| |||||||||    
T  3716089 aagattgttgacccagttcggtccaatatgacctaatctaggagagagagcagctctccaatctactatgatgaaagtgttacaaaagagttacaaga 3715992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 40592869 - 40592772
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| ||||||||| ||||||||| |||||||||||| | ||||| |||||||||||||||| |||||||||    
T  40592869 aagattgttgacccagttcggtccaatatgacctaatctgtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaagagttacaaga 40592772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 48438214 - 48438311
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||| |||||| ||||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  48438214 aagattattgacctagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 48438311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 6794800 - 6794704
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||||||||||||| |||  | |||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  6794800 aagattgttgacccggttaggtccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 6794704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 25795781 - 25795878
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||| | || || ||||||||||| |||| |||||||||    
T  25795781 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatctactaagatgaaagtgttacgaaagagttacaaga 25795878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 26298988 - 26299085
Alignment:
Q  72 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| |  ||||||| | ||||||||||||||||||||| |||||||| | ||||| |||||||||||||||| |||||||||    
T  26298988 aagattgttgacccagttcggttcaatatgacataatctgggggagagagcagccctccaatctactatgatgaaagtgttacaaaagagttacaaga 26299085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 1417577 - 1417493
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-agaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||| | |||||||||| || | ||||||||||||||    
T  1417577 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatccctccaatccactaagaagaaagtgttacaa 1417493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 10207935 - 10207983
Alignment:
Q  72 aagattgttgacccagttcagccaatatggcctaatctgggggagagag 120  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10207935 aagattgttgacccagttcagccaatgtggcctaatctgggggagagag 10207983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 47923993 - 47923896
Alignment:
Q  72 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||| |||||||||||||| || ||||| | ||||| ||||||| |||||||| |||||||||    
T  47923993 aagattgttgacccagttcgatccaatatgacctaatctaggggagagagcagcccttcaatctactatgatgaaagtgctacaaaagagttacaaga 47923896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 37466291 - 37466375
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    |||||||||||| |||||| | |||||||| ||||||||||||||||||| ||| |||||||||| || || |||||||||||||    
T  37466291 aagattgttgacacagttcggtccaatatgacctaatctgggggagagagtagccctccaatccactaagatgaaagtgttacaa 37466375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 39040079 - 39039995
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||| ||||| | |||||||| |||||||||||| ||||| || |||||||||||| ||||| |||||||||||||    
T  39040079 aagattgttgacctagttcggtccaatatgacctaatctggggaagagaacaactctccaatccactatgatgaaagtgttacaa 39039995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 40844652 - 40844748
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||  |||||| | |||||||| |||||||||||| |||||||||| ||| |||||| ||||| |||||||||||||||| |||||||||    
T  40844652 aagattgttgattcagttcggtccaatatgacctaatctgggg-agagagcagccctcaaatccactatgatgaaagtgttacaaaagagttacaaga 40844748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 3328443 - 3328359
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||||  |||||||| |||||||| | |||||||||||| || ||||||| || || |||||||||||||    
T  3328443 aagattgttgacccagttcattccaatatgacctaatctagaggagagagcagcccttcaatccactaagatgaaagtgttacaa 3328359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 4387014 - 4386947
Alignment:
Q  72 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaata 138  Q
    ||||||||| |||||||| ||  || |||| |||| ||||||||||||||||||||||||||||||||    
T  4387014 aagattgtttacccagtttagttcagtatgacctactctgggggagagagcagctctccaatccaata 4386947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 24695251 - 24695154
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||| ||||| | |||||||| ||||||||  ||||||||||| | ||| |||||  ||||| |||||||||||||||| |||||||||    
T  24695251 aagattgttgacctagttcggtccaatatgacctaatctacgggagagagcaaccctctaatccgctatgatgaaagtgttacaaaagagttacaaga 24695154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 38210629 - 38210569
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| | |||||||||||||||||||||||||||    
T  38210629 ttgttgacccagttcggtccaatctgacctagtatgggggagagagcagctctccaatcca 38210569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 50494258 - 50494198
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  50494258 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 50494198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 53894055 - 53894119
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatat 139  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||||||    
T  53894055 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatccaatat 53894119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 3323755 - 3323693
Alignment:
Q  93 ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    |||||||| ||||||||||| |||||| |||| |||||||||| || || |||||||||||||    
T  3323755 ccaatatgacctaatctgggagagagaacagccctccaatccactaagatgaaagtgttacaa 3323693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 458543 - 458483
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  458543 ttgttgacccagttcggtccaacctgacctagtctgggggagagagcagccctccaatcca 458483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 6063444 - 6063504
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    |||| |||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  6063444 ttgtggacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 6063504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 10621528 - 10621588
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| ||  ||| |||||||||||||||||| ||||||||||    
T  10621528 ttgttgacccagttcggtccaatctgagctagtctgggggagagagcagccctccaatcca 10621588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 39153357 - 39153405
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagaga 119  Q
    ||||||||||||||||||||| ||||  || ||||||||||||||||||    
T  39153357 aagattgttgacccagttcagtccaacttgacctaatctgggggagaga 39153405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 41398176 - 41398390
Alignment:
Q  5 aaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcct 104  Q
    ||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41398176 aaaaccacacaaagagataccaaagcataaacaagataag------aaggaagaacaaaacaccgagaagattgttgacccaggtcagccaatatggcct 41398269  T
Q  105 aatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccttaga 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41398270 aatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccctaga 41398369  T
Q  205 ttctaccctttggtattttcc 225  Q
    |||||||||||||||||||||    
T  41398370 ttctaccctttggtattttcc 41398390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 41390521 - 41390735
Alignment:
Q  5 aaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcct 104  Q
    ||||||||||||||||||| ||||||||||||||||||||      |||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  41390521 aaaaccacacaaagagatatcaaagcataaacaagataag------aaggaagaacaaaacatcgagaagattgttgacccagatcagccaatatggcct 41390614  T
Q  105 aatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccttaga 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41390615 aatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccctaga 41390714  T
Q  205 ttctaccctttggtattttcc 225  Q
    |||||||||||||||||||||    
T  41390715 ttctaccctttggtattttcc 41390735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 25445245 - 25445020
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||||||||| || ||| || |||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  25445245 tagcaaaaccacacaaagagctaacaa-gcgtaaacaagataaacggtaaaaggaaagaacaaaacaccgagcaagattgttgacccagttcagccaata 25445147  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacatgaacaaa 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  25445146 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaa 25445047  T
Q  198 ccttagattctaccctttggtattttcc 225  Q
    || ||||  |||||||||||||||||||    
T  25445046 ccctaga-gctaccctttggtattttcc 25445020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 2 - 218
Target Start/End: Complemental strand, 24787528 - 24787312
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||| |||||||  |||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24787528 agcaaaaccacacaaagagataacaaagca--aacaagataagcaagaaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatgg 24787431  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  ||  |||||||||||| ||||||| ||||||| |    
T  24787430 cctaatctgggggggagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagcattacacaagaacaaatc 24787331  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  24787330 ctagattctaccctttggt 24787312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 39445429 - 39445653
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  39445429 tagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacaaaacaccgagcaagattgttgacccagttcagccaata 39445527  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacatgaacaaa 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  39445528 tggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaa 39445626  T
Q  198 ccttagattctaccctttggtattttcc 225  Q
    || ||||  |||||||||||||||||||    
T  39445627 ccctaga-actaccctttggtattttcc 39445653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 1055167 - 1054943
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  1055167 tagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacaaaacaccgagcaagattgttgacccagttcagccaata 1055069  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacatgaacaaa 197  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  1055068 tggcctaatctgggggagagagcaactctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaa 1054970  T
Q  198 ccttagattctaccctttggtattttcc 225  Q
    || ||||  |||||||||||||||||||    
T  1054969 ccctaga-actaccctttggtattttcc 1054943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 44024028 - 44023805
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgag-aagattgttgacccagttcagccaatat 99  Q
    |||||||||||||||||||| || ||| |||||||||||||||  | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||    
T  44024028 tagcaaaaccacacaaagagctaacaa-gcataaacaagataaatggtaaaggaaagaacaaaacaccgagcaagattgttgacccagttcagccaatat 44023930  T
Q  100 ggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacatgaacaaac 198  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  44023929 ggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttgtcaagctttacacatgaacaaac 44023831  T
Q  199 cttagattctaccctttggtattttcc 225  Q
    | ||||  |||||||||||||||||||    
T  44023830 cctaga-actaccctttggtattttcc 44023805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 55 - 225
Target Start/End: Complemental strand, 43988566 - 43988392
Alignment:
Q  55 aagaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    |||||||||||||| || ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  43988566 aagaacaaaacaccaagcaagattgtttacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttaca 43988467  T
Q  154 aaag-gttacaagactctagcct-tcaagctttacacatg--aacaaaccttagattctaccctttggtattttcc 225  Q
    |||| ||||||||| |||||| | |||||||||||||| |  || ||||| |||| |||||||||||| |||||||    
T  43988466 aaagagttacaagaatctagcttatcaagctttacacaagacaaaaaaccctaga-tctaccctttggcattttcc 43988392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 24202904 - 24202770
Alignment:
Q  33 aaacaagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||||||| | ||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24202904 aaacaagataagcaagaaa-ggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 24202806  T
Q  132 tccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||| ||||| |||||||||||||| ||||||||||    
T  24202805 tccactatgatgaaagtgttacaaagggttacaaga 24202770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 19361564 - 19361433
Alignment:
Q  36 caagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 134  Q
    |||||||||| | ||||||||||||||| ||||| | ||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  19361564 caagataagcaagaaaaggaagaacaaacacaccaa-aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatcc 19361466  T
Q  135 aatatga-gaaagtgttacaaaaggttacaaga 166  Q
    | ||||| |||||||||||||| ||||||||||    
T  19361465 actatgatgaaagtgttacaaagggttacaaga 19361433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 19380204 - 19380073
Alignment:
Q  36 caagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 134  Q
    |||||||||| | ||||||||||||||| ||||| | ||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  19380204 caagataagcaagaaaaggaagaacaaacacaccaa-aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatcc 19380106  T
Q  135 aatatga-gaaagtgttacaaaaggttacaaga 166  Q
    | ||||| |||||||||||||| ||||||||||    
T  19380105 actatgatgaaagtgttacaaagggttacaaga 19380073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 19358975 - 19358844
Alignment:
Q  36 caagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 134  Q
    |||||||||| | ||||||||||||||| ||| | | ||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  19358975 caagataagcaagaaaaggaagaacaaacacatcaa-aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatcc 19358877  T
Q  135 aatatga-gaaagtgttacaaaaggttacaaga 166  Q
    | ||||| |||||||||||||| ||||||||||    
T  19358876 actatgatgaaagtgttacaaagggttacaaga 19358844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 26644994 - 26644898
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  26644994 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccattatgatgaaagtgttacaaagagttacaaga 26644898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 47704033 - 47703946
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  47704033 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 47703946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 19072928 - 19073025
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||    
T  19072928 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaaga 19073025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 19120818 - 19120915
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||    
T  19120818 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaaga 19120915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 16124613 - 16124516
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||| |||||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  16124613 aagattgttgactcagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 16124516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 27104469 - 27104372
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||| |||||| | |||||||  |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  27104469 aagattgttgacacagttcggtccaatataacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 27104372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 3281708 - 3281804
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||||| |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||  |||||||||    
T  3281708 aagattattgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccacgatgatgaaagtgttacaaagagttacaaga 3281804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 9476261 - 9476348
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||    
T  9476261 aagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtattacaaaag 9476348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 13598398 - 13598485
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| || ||||||| ||||| ||||||||||||||||    
T  13598398 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaag 13598485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 29651811 - 29651898
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||| |||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  29651811 aagatttttgacccagttcggtccaatatgacctaatctgggggagagagcagcactccaatccactatgatgaaagtgttacaaaag 29651898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 37069770 - 37069864
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaa 164  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||  |||||||    
T  37069770 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatctctccgatccactatgatgaaagtgttacaaagagttacaa 37069864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 775672 - 775759
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||| ||| | |||||||| ||||||||||||||||||| |||||||||||||| || || ||||||||||||||||    
T  775672 aagattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactaagatgaaagtgttacaaaag 775759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 166
Target Start/End: Complemental strand, 21536702 - 21536570
Alignment:
Q  37 aagataagcgataaaaggaag-aacaaa-acaccgagaagattgttgacccagttcagccaata-tggcctaatctgggggagagagcagctctccaatc 133  Q
    |||||||||||| |||| ||| |||||| ||||| | ||||||||||||||||||| |  || | || ||||||||||||||||||||||||||||||||    
T  21536702 aagataagcgatgaaagaaaggaacaaacacaccaa-aagattgttgacccagttcggtaaaaaatgacctaatctgggggagagagcagctctccaatc 21536604  T
Q  134 caatatga-gaaagtgttacaaaaggttacaaga 166  Q
    || ||| | ||||||||||||||  |||||||||    
T  21536603 cactataatgaaagtgttacaaagagttacaaga 21536570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 13604720 - 13604624
Alignment:
Q  72 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||  |  ||||||| |||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||  |||||||||    
T  13604720 aagattgttgacccagttaggttcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaaatgttacaaagagttacaaga 13604624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 47098921 - 47098837
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||| || |||||||||||||||||||| |||||||||| || || |||||||||||||    
T  47098921 aagattgttgacccagttcggtccaatatgaccgaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 47098837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 32889439 - 32889523
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||| | ||||| | |||||||| |||| ||||||||| ||||||||||||||||||| || || |||||||||||||    
T  32889439 aagattgttgatctagttcggtccaatatgacctagtctgggggatagagcagctctccaatccactaagatgaaagtgttacaa 32889523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 25439875 - 25439827
Alignment:
Q  176 tcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  25439875 tcaagctttacacatgaacaaaccctaga-gctaccctttggtattttcc 25439827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 47102935 - 47102874
Alignment:
Q  75 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    |||||||||||||||| | |||||||| |||||||| ||||||||||||||  |||||||||    
T  47102935 attgttgacccagttcggtccaatatgacctaatctaggggagagagcagccatccaatcca 47102874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 9459419 - 9459479
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  9459419 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 9459479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 9463246 - 9463306
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  9463246 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 9463306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 16226446 - 16226386
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  16226446 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 16226386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 23786118 - 23786058
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  23786118 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 23786058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 51752642 - 51752582
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  51752642 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 51752582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 35216 - 34999
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35216 tagcaaaaccacacaaagagataccaaagca-aaacaagataagcggtaaaaggaagaacaaaacaccgagaagattgttaacccagttcagccaatatg 35118  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  35117 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaactctagccttcaagctttacacatgaacaaacc 35018  T
Q  200 ttagattctaccctttggt 218  Q
     |||| |||||||||||||    
T  35017 ctagactctaccctttggt 34999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 12406262 - 12406479
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12406262 tagcaaaaccacacaaagagataccaaagca-aaacaagataagcggtaaaagaaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 12406360  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12406361 gcctaatctgggggagagaatagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacc 12406460  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  12406461 ctagattctaccctttggt 12406479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 12396842 - 12397059
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12396842 tagcaaaaccacacaaagagataccaaagca-aaacaagataagcggtaaagggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 12396940  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||    
T  12396941 gcctaatctgggggagagaacagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagcctttaatctttacacatgaacaaacc 12397040  T
Q  200 ttagattctaccctttggt 218  Q
     ||||||||||||||||||    
T  12397041 ctagattctaccctttggt 12397059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 24024482 - 24024257
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaa-caccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||||||||| || ||| ||||||||||||||||| | |||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  24024482 tagcaaaaccacacaaagagctaacaa-gcataaacaagataagcaagaaaaggaagaacaaaaacaccgaacaagattgttgacccagttcagccaata 24024384  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaac 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24024383 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaatgttacaagactctagccttcaagctttacacatgaacaaac 24024284  T
Q  199 cttagattctaccctttggtattttcc 225  Q
    | |||||||||||||||||||||||||    
T  24024283 cctagattctaccctttggtattttcc 24024257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 31109738 - 31109514
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgag-aagattgttgacccagttcagccaatat 99  Q
    |||||||||||||||| ||||| |||||||||||||||||||| | | ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  31109738 tagcaaaaccacacaa-gagattccaaagcataaacaagataaacaagaaaaggaagaacaaaacaccgaacaagattgttgacccagttcagccaatat 31109640  T
Q  100 ggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacc 199  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31109639 ggcctaatctaggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttgcacatgaacaaacc 31109540  T
Q  200 ttagattctaccctttggtattttcc 225  Q
     |||||||||||||||| ||||||||    
T  31109539 ctagattctaccctttgatattttcc 31109514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 19992242 - 19992467
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  19992242 tagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacaaaacaccgagcaagattgttgacccagttcagccaata 19992340  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacatgaacaaa 197  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  19992341 tggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaa 19992440  T
Q  198 ccttagattctaccctttggtattttcc 225  Q
    || ||||  |||||||||||||||||||    
T  19992441 ccctaga-actaccctttggtattttcc 19992467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 4866665 - 4866820
Alignment:
Q  5 aaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcct 104  Q
    ||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4866665 aaaaccacacaaaaagataccaaagca-aaacaagataagcggtaaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcct 4866763  T
Q  105 aatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtta 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4866764 aatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtta 4866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 20357711 - 20357501
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    |||||||||||||||||||||| |||||||  |||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  20357711 agcaaaaccacacaaagagataacaaagca--aacaagataagcaagaaaaggaagaacaaaataccaagaagattgttgacccagttcagccaatatgg 20357614  T
Q  102 cctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaacc 199  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||  |||||||||||||||||||| |||||  ||    
T  20357613 cctaatttgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagctttacacaagaacatgcc 20357514  T
Q  200 ttagattctaccc 212  Q
     ||||||||||||    
T  20357513 ctagattctaccc 20357501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 212
Target Start/End: Original strand, 2057892 - 2058108
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaa----caagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaat 97  Q
    |||||||||||||||||||||||||||||| |||    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2057892 agcaaaaccacacaaagagataccaaagcaaaaaaaaacaagataagcaataaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaat 2057991  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaac 194  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| ||||||| ||||||| ||||    
T  2057992 atggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcattcaagc-ttacacaagaac 2058090  T
Q  195 aaaccttagattctaccc 212  Q
    || || ||||||||||||    
T  2058091 aagccctagattctaccc 2058108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 21812394 - 21812169
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||||||||| || ||| ||||||||||||||| || |||||| || ||||||||||||||| ||||||||||||||||||||||||||     
T  21812394 tagcaaaaccacacaaagagttaacaa-gcataaacaagataaacggtaaaagaaaagaacaaaacaccgagcaagattgttgacccagttcagccaatg 21812296  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tc-aagctttacacatgaacaa 196  Q
    ||||||||||||||||||||||||||| |||||||||||||| | |||| |||||||||||| |||||||||||| | || |||||||||||||||||||    
T  21812295 tggcctaatctgggggagagagcagctttccaatccaatatgtg-aagtcttacaaaaggttccaagactctagcttgtcaaagctttacacatgaacaa 21812197  T
Q  197 accttagattctaccctttggtattttcc 225  Q
    ||| |||| ||||||||||||||||||||    
T  21812196 accctaga-tctaccctttggtattttcc 21812169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 24261447 - 24261253
Alignment:
Q  35 acaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||| ||||||||| ||  |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24261447 acaagataaacgataaaagaaaacgaacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaa 24261348  T
Q  132 tccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    ||||||||| ||| |||||||||||| ||||||||| |||||| | |||||||||||||| ||  ||||| ||||  ||||||||||||| |||||    
T  24261347 tccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctaga-cctaccctttggtaatttcc 24261253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 24266326 - 24266132
Alignment:
Q  35 acaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||| ||||||| | ||  |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24266326 acaagataaacgataaaggaaaacgaacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaa 24266227  T
Q  132 tccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    ||||||||| ||| |||||||||||| ||||||||| |||||| | |||||||||||||| ||  ||||| ||||  ||||||||||||| |||||    
T  24266226 tccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctaga-cctaccctttggtaatttcc 24266132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 189
Target Start/End: Original strand, 16880034 - 16880192
Alignment:
Q  35 acaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||| ||||||||| ||  |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16880034 acaagataaacgataaaagaaaacgaacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaa 16880133  T
Q  132 tccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacaca 189  Q
    ||||||||| ||| || |||||||  ||||||||| |||||| | ||||||||||||||    
T  16880134 tccaatatgtgaatgttttacaaagagttacaagaatctagcttatcaagctttacaca 16880192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 189
Target Start/End: Original strand, 16884890 - 16885048
Alignment:
Q  35 acaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||| ||||||||| ||  |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16884890 acaagataaacgataaaagaaaacgaacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaa 16884989  T
Q  132 tccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacaca 189  Q
    ||||||||| ||| || |||||||  ||||||||| |||||| | ||||||||||||||    
T  16884990 tccaatatgtgaatgttttacaaagagttacaagaatctagcttatcaagctttacaca 16885048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 21639770 - 21639904
Alignment:
Q  33 aaacaagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||||||| | ||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21639770 aaacaagataagcaagaaa-ggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 21639868  T
Q  132 tccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||| ||| | |||||||||||||| ||||||||||    
T  21639869 tccactataatgaaagtgttacaaagggttacaaga 21639904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 1533563 - 1533445
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagt 147  Q
    |||| ||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  1533563 aaagaaagaacaaacacaccaataagattgttgacccagttcagccaatatggcctaatctgggggagagagcatctctccaatccaatatgatgaaagt 1533464  T
Q  148 gttacaaaaggttacaaga 166  Q
    |||||||| ||||||||||    
T  1533463 gttacaaagggttacaaga 1533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 18408764 - 18408859
Alignment:
Q  72 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  18408764 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccagtatgatgaaagtgttacaaagggttacaaga 18408859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 21645968 - 21646102
Alignment:
Q  33 aaacaagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||||||| | ||| ||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  21645968 aaacaagataagcaagaaa-ggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctagggaagagagcagctctccaa 21646066  T
Q  132 tccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||| ||||| |||||||||| ||| ||||||||||    
T  21646067 tccactatgatgaaagtgttaaaaagggttacaaga 21646102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 18413641 - 18413735
Alignment:
Q  72 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  18413641 aagattgttgacccagttcagccaatatggcctaatct-ggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaaga 18413735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 21983285 - 21983370
Alignment:
Q  73 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  21983285 agattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaa 21983370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 29159803 - 29159900
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  29159803 aagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 29159900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 46516407 - 46516310
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  46516407 aagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 46516310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 49091661 - 49091758
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||||||||| || |||||||| |||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||| |||||||||    
T  49091661 aagattgttgacccagtttagtccaatatgacctaatctggggaagagagcaactctccaatccactatgatgaaagtgttacaaaagagttacaaga 49091758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 44848781 - 44848685
Alignment:
Q  72 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| |  ||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  44848781 aagattgttgacccagttcggttcaatatgacctaacctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 44848685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 2647793 - 2647696
Alignment:
Q  72 aagattgttgacccagttcagcc-aatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||| ||| ||| |||||| |||| |||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  2647793 aagattgttgacccaattcggcccaatatgacctattctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 2647696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 33332547 - 33332450
Alignment:
Q  72 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||||||||||||| | | |||||| ||||||||||||||||||||||| |||||||||| || || |||||||||||||||| |||||||||    
T  33332547 aagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaaaagagttacaaga 33332450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 9190105 - 9190021
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||| || || |||||||||||||    
T  9190105 aagattgttgacccagttcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaa 9190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 20284089 - 20284173
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| || || |||||||||||||    
T  20284089 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 20284173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 55948 - 56044
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||| |||||||||||| | |||||||| |||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  55948 aagattattgacccagttcggtccaatatgacctaatctgggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 56044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 2580390 - 2580474
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||| ||| | |||||||| |||| ||||||||||||||||||||||||||||| || || |||||||||||||    
T  2580390 aagattgttgacccaattcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaa 2580474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 155
Target Start/End: Original strand, 35960816 - 35960901
Alignment:
Q  72 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||| ||||| |  ||||||| ||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||    
T  35960816 aagattgttgaccgagttcggttcaatatgacctaatctgggggagagagcagccctccaaaccactatgatgaaagtgttacaaa 35960901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 9185262 - 9185178
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||  |||| |||||||||||||| |||||||||||||| || || |||||||||||||    
T  9185262 aagattgttgacccagttcggtccaatataacctagtctgggggagagagaagctctccaatccactaagatgaaagtgttacaa 9185178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 151
Target Start/End: Original strand, 47263678 - 47263757
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgtta 151  Q
    ||||||||||||||||||| | |||||||| |||||| |||||||||  |||||||||||||||| ||||| ||||||||||    
T  47263678 aagattgttgacccagttcggtccaatatgacctaatatgggggaga--gcagctctccaatccactatgatgaaagtgtta 47263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 155
Target Start/End: Original strand, 2479337 - 2479421
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| |  ||||||| |||||||| |||| ||||||||||||| |||||| ||||| ||||||||||||||    
T  2479337 aagattgttgacccagttcggttcaatatgacctaatctagggg-gagagcagctctcaaatccactatgatgaaagtgttacaaa 2479421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 4796764 - 4796667
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    ||||||||| ||||||||| | |||| ||| |||||||||||||||| |||||| ||| |||||| ||||| |||| ||||||||||| |||||||||    
T  4796764 aagattgttaacccagttcggtccaaaatgacctaatctgggggagaaagcagccctcaaatccactatgatgaaattgttacaaaagagttacaaga 4796667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 28617319 - 28617258
Alignment:
Q  75 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    |||||| ||||||||| | |||||||| |||| |||||||||||||||||||||||||||||    
T  28617319 attgtttacccagttcggtccaatatgacctactctgggggagagagcagctctccaatcca 28617258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 21988909 - 21988992
Alignment:
Q  73 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    |||||||||||||||||| | |||||||| |||||||||| |  ||||||| |||||||||||| | ||| |||||||||||||||    
T  21988909 agattgttgacccagttcggtccaatatgacctaatctggag--gagagcaactctccaatccactttgatgaaagtgttacaaaa 21988992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 31155911 - 31155971
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  31155911 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 31155971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 1049296 - 1049356
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  1049296 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 1049356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 2935557 - 2935497
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  2935557 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 2935497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 3036013 - 3035953
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  3036013 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 3035953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 5817366 - 5817303
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||| || |||||| | |||||||| |||| ||||||| |||||||||||||||||||||    
T  5817366 aagattgttaactcagttcggtccaatatgacctactctgggg-agagagcagctctccaatcca 5817303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 7351652 - 7351712
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| | |||||||||||||||| ||||||||||    
T  7351652 ttgttgacccagttcggtccaatctgacctagtatgggggagagagcagccctccaatcca 7351712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 8153514 - 8153466
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagaga 119  Q
    ||||||||||||||||||||| ||||  || ||||||||||||||||||    
T  8153514 aagattgttgacccagttcagtccaacttgacctaatctgggggagaga 8153466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 9027194 - 9027254
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  9027194 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctcctatcca 9027254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 22108355 - 22108295
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  22108355 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 22108295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 22137366 - 22137306
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  22137366 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 22137306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 40550115 - 40550055
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  40550115 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 40550055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 40552393 - 40552333
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  40552393 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 40552333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 173; Significance: 4e-93; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 9794 - 9574
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 100  Q
    |||||||||||||||| ||| || ||| ||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9794 tagcaaaaccacacaa-gagctaacaa-gcataaacaagataagcaagaaa-ggaagaacaaaacaccgagaagattgttgacccagttcagccaatatg 9698  T
Q  101 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaacct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  9697 gcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccc 9598  T
Q  201 tagattctaccctttggtattttcc 225  Q
    |||| ||||||||||||||||||||    
T  9597 taga-tctaccctttggtattttcc 9574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 3845 - 3779
Alignment:
Q  158 gttacaagactctagccttcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  3845 gttacaagactctagccttcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcc 3779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 292 - 516
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccgag-aagattgttgacccagttcagccaata 98  Q
    |||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  292 tagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacaaaacaccgagcaagattgttgacccagttcagccaata 390  T
Q  99 tggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacatgaacaaa 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  391 tggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaa 489  T
Q  198 ccttagattctaccctttggtattttcc 225  Q
    || ||||  |||||||||||||||||||    
T  490 ccctaga-actaccctttggtattttcc 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 14433 - 14239
Alignment:
Q  35 acaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||| ||||||||| ||  |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14433 acaagataaacgataaaagaaaacgaacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaa 14334  T
Q  132 tccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacatgaacaaaccttagattctaccctttggtattttcc 225  Q
    ||||||||| ||| |||||||||||| ||||||||| |||||| | |||||||||||||| ||  ||||| ||||  ||||||||||||| |||||    
T  14333 tccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctaga-cctaccctttggtaatttcc 14239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 19319 - 19095
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaat 97  Q
    |||||||||||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||||| ||||||| |||||||||||||||||||||||| |    
T  19319 tagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaa-caccgagcaagattgttgacccagttcagccatt 19224  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacatgaaca 195  Q
     |||||||||||||||||||||||||||||||||| ||||||| ||  |||||||||||| ||||||||| |||||| | |||||||||||||| ||  |    
T  19223 gtggcctaatctgggggagagagcagctctccaatacaatatgtgagtgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaa 19124  T
Q  196 aaccttagattctaccctttggtattttcc 225  Q
    |||| |||| |||||||||||||| |||||    
T  19123 aaccctaga-tctaccctttggtaatttcc 19095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 2405 - 2181
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaat 97  Q
    |||||||||||||| ||||| || ||| |||||  |||||||| ||||||| | ||  ||||||| ||||||| ||||||||||||||||||||||||||    
T  2405 tagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaggaaaacgaacaaa-caccgagcaagattgttgacccagttcagccaat 2310  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacatgaaca 195  Q
     |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | |||||||||||||| ||  |    
T  2309 gtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaa 2210  T
Q  196 aaccttagattctaccctttggtattttcc 225  Q
    |||| |||| |||||||||||||| |||||    
T  2209 aaccataga-tctaccctttggtaatttcc 2181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 149110 - 148886
Alignment:
Q  1 tagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaat 97  Q
    |||||||||||||| ||||| || ||| |||||  |||||||| ||||||| | ||  ||||||| ||||||| ||||||||||||||||||||||||||    
T  149110 tagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaggaaaacgaacaaa-caccgagcaagattgttgacccagttcagccaat 149015  T
Q  98 atggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacatgaaca 195  Q
     |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | |||||||||||||| ||  |    
T  149014 gtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaa 148915  T
Q  196 aaccttagattctaccctttggtattttcc 225  Q
    |||| |||| |||||||||||||| |||||    
T  148914 aaccataga-tctaccctttggtaatttcc 148886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 18087 - 17953
Alignment:
Q  33 aaacaagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||||||| | ||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18087 aaacaagataagcaagaaa-ggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 17989  T
Q  132 tccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||| ||||| |||||||||||||| ||||||||||    
T  17988 tccactatgatgaaagtgttacaaagggttacaaga 17953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 24164 - 24046
Alignment:
Q  50 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagt 147  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  24164 aaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagt 24065  T
Q  148 gttacaaaaggttacaaga 166  Q
    |||||||| ||||||||||    
T  24064 gttacaaagggttacaaga 24046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 182088 - 181980
Alignment:
Q  35 acaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 131  Q
    ||||||||| ||||||||| ||  |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  182088 acaagataaacgataaaagaaaacgaacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaa 181989  T
Q  132 tccaatatg 140  Q
    |||||||||    
T  181988 tccaatatg 181980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 8516 - 8420
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  8516 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 8420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 22403 - 22343
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  22403 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 22343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 24678 - 24618
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  24678 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 24618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 400 - 300
Alignment:
Q  2 agcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatgg 101  Q
    ||||||||||||||||||||||  |||||| ||||||||||||| | ||| | |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  400 agcaaaaccacacaaagagataataaagca-aaacaagataagctagaaa-gaaagaacaaaacaccaagaagattgttgacctagttcagccaatatgg 303  T
Q  102 cct 104  Q
    |||    
T  302 cct 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 166
Target Start/End: Original strand, 85684 - 85779
Alignment:
Q  73 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||  |||| ||||||||||||||  |||||||||    
T  85684 agattgttgacccagttcagtccaatatgacctaatctgggggagagagcggctctccaatccaccatgatgaaagtgttacaaagagttacaaga 85779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 44058 - 43962
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||| | ||||||||  ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  44058 aagattgttgacccagttcggtccaatatgatctattctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 43962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 166
Target Start/End: Complemental strand, 36965 - 36833
Alignment:
Q  37 aagataagcgataaaaggaag-aacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatc 133  Q
    ||||||||| ||||||| ||| |||||| ||||| | ||||||||||||||||||| | |||||||| |||||||| ||| |||||||||||| |||| |    
T  36965 aagataagcaataaaagaaaggaacaaacacaccaa-aagattgttgacccagttcggtccaatatgacctaatctagggaagagagcagctcgccaacc 36867  T
Q  134 caatatga-gaaagtgttacaaaaggttacaaga 166  Q
    || ||||| ||||||||||||||  |||||||||    
T  36866 cactatgatgaaagtgttacaaagagttacaaga 36833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 5683 - 5770
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| || ||||||| ||||| ||||||||||||||||    
T  5683 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaag 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 2492 - 2579
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||||||||   |||||||| |||||||||||||||| |||||| |||||||||| ||||| ||||||||||||||||    
T  2492 aagattgttgacccagttcgctccaatatgacctaatctgggggagacagcagccctccaatccactatgatgaaagtgttacaaaag 2579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 133377 - 133281
Alignment:
Q  72 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 166  Q
    ||||||||||||||||||  |  ||||||| |||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||  |||||||||    
T  133377 aagattgttgacccagttaggttcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaaatgttacaaagagttacaaga 133281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 10729 - 10826
Alignment:
Q  72 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||| |||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||    
T  10729 aagattattgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaaga 10826  T

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Target: scaffold0098 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 45253 - 45337
Alignment:
Q  72 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    |||||||||||| |||||| |  ||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  45253 aagattgttgactcagttcggttcaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagcgttacaa 45337  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 166
Target Start/End: Original strand, 17266 - 17360
Alignment:
Q  75 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 166  Q
    |||||||||||||||| |  ||||||| |||||| ||||  |||||||| | |||||||||| ||||| |||||||||||||||| |||||||||    
T  17266 attgttgacccagttcggttcaatatgacctaatatgggaaagagagcaaccctccaatccattatgatgaaagtgttacaaaagagttacaaga 17360  T

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Target: scaffold0267 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 329 - 269
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  329 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 269  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 11500 - 11533
Alignment:
Q  102 cctaatctgggggagagagcagctctccaatcca 135  Q
    |||| |||||||||||||||||||||||||||||    
T  11500 cctagtctgggggagagagcagctctccaatcca 11533  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 69292 - 69352
Alignment:
Q  76 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 135  Q
    ||||||||||||||| | ||||  || |||| ||||||||||||||||||||||| |||||    
T  69292 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagctctccgatcca 69352  T

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