View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0434_high_14 (Length: 213)
Name: NF0434_high_14
Description: NF0434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0434_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 42336942 - 42337143
Alignment:
| Q |
1 |
aataagttgtccaacaaaaaagctggaaaagcatacaaagccaacacgtggccaaaatacacagagcggttgtgcatgattaacaaatgtaaatagttcg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
42336942 |
aataagttgtccaacaaaaaagctggaaaagcatacaaagccaacacatggccaaaatacacagagcggttgtgcatgattaacaaatgtaaataattcg |
42337041 |
T |
|
| Q |
101 |
tctcgtctcgtaccacacatcattgttgataaatgaatagagaaaactcttggaacaatattagttcattatctctacttccttgttaagtgtcccgtct |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
42337042 |
tctcgtctcgcgccacacatcattgttgataaatgaatagagaaaactcttggaacaatattagttcattatctcaacttccttgttaagtgtcccgtct |
42337141 |
T |
|
| Q |
201 |
ct |
202 |
Q |
| |
|
|| |
|
|
| T |
42337142 |
ct |
42337143 |
T |
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