View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0435_low_19 (Length: 282)
Name: NF0435_low_19
Description: NF0435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0435_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 102029 - 102227
Alignment:
| Q |
42 |
cacagacaggtaatcgtgcatagatcctcacctgcaaaggagttcctgacagcaaaactctacgtttacacgggagagcagccaatgcctaatccaggaa |
141 |
Q |
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| T |
102029 |
cacagacaggtaatcgtgcatagatcctcacctgcaaaggagttcctgacagcaaaactctacgtttacacgggagagcagccaatgcctaatccaggaa |
102128 |
T |
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| Q |
142 |
gtatttgtgaccgactcagaaatatgcctgtaaagaggaaggagaaaggagatttaatagtaccttgtttgttattgtctgatcatttttcagtctgtg |
240 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
102129 |
gtatttgtgagtgactcagaaatatgcctgtaaagaggaaggagaaaggagatttaatagtaccttgtttgttattgtctgatcatttttcagtctgtg |
102227 |
T |
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