View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0435_low_7 (Length: 413)

Name: NF0435_low_7
Description: NF0435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0435_low_7
NF0435_low_7
[»] chr6 (20 HSPs)
chr6 (192-403)||(32950493-32950704)
chr6 (30-172)||(22166364-22166507)
chr6 (30-172)||(15698813-15698956)
chr6 (30-161)||(22062320-22062451)
chr6 (30-172)||(20017043-20017186)
chr6 (30-172)||(20169501-20169643)
chr6 (30-172)||(22243070-22243213)
chr6 (30-172)||(24856059-24856202)
chr6 (30-172)||(15850796-15850939)
chr6 (30-172)||(22767930-22768076)
chr6 (41-172)||(25625025-25625157)
chr6 (30-172)||(18011124-18011268)
chr6 (33-172)||(18853273-18853412)
chr6 (30-172)||(21561241-21561385)
chr6 (30-169)||(29594963-29595103)
chr6 (30-164)||(18447484-18447616)
chr6 (30-172)||(30672540-30672680)
chr6 (30-172)||(25632162-25632302)
chr6 (30-172)||(18188396-18188530)
chr6 (124-172)||(11218884-11218932)
[»] chr3 (35 HSPs)
chr3 (30-172)||(6814127-6814269)
chr3 (30-172)||(10603287-10603429)
chr3 (30-172)||(13505322-13505464)
chr3 (30-172)||(11946672-11946815)
chr3 (30-172)||(7599612-7599755)
chr3 (30-165)||(9361784-9361919)
chr3 (30-172)||(12187890-12188033)
chr3 (30-172)||(12194304-12194447)
chr3 (30-172)||(22165126-22165269)
chr3 (30-172)||(16449548-16449692)
chr3 (30-172)||(10146268-10146412)
chr3 (30-172)||(15644346-15644489)
chr3 (30-172)||(13188232-13188375)
chr3 (30-172)||(16654987-16655130)
chr3 (30-172)||(37941636-37941779)
chr3 (30-172)||(4369947-4370090)
chr3 (30-172)||(10160987-10161134)
chr3 (45-172)||(15557775-15557903)
chr3 (30-172)||(16374292-16374438)
chr3 (30-164)||(12777335-12777470)
chr3 (30-172)||(13689914-13690057)
chr3 (30-172)||(13694159-13694302)
chr3 (41-172)||(12161019-12161148)
chr3 (30-152)||(13089623-13089746)
chr3 (30-152)||(13096975-13097098)
chr3 (41-172)||(10547697-10547827)
chr3 (30-169)||(3246329-3246463)
chr3 (30-172)||(17387020-17387159)
chr3 (41-172)||(11866054-11866184)
chr3 (46-154)||(1991999-1992104)
chr3 (30-154)||(20157430-20157553)
chr3 (124-172)||(3340114-3340162)
chr3 (125-172)||(13196349-13196396)
chr3 (124-172)||(15629866-15629914)
chr3 (124-168)||(15945892-15945936)
[»] chr4 (14 HSPs)
chr4 (30-172)||(11497429-11497571)
chr4 (30-172)||(15253605-15253747)
chr4 (30-172)||(42710548-42710690)
chr4 (30-172)||(13822171-13822314)
chr4 (30-172)||(22110216-22110359)
chr4 (30-172)||(15348629-15348771)
chr4 (30-172)||(18291274-18291414)
chr4 (41-172)||(38426000-38426132)
chr4 (30-164)||(18082273-18082409)
chr4 (30-172)||(10630003-10630146)
chr4 (30-165)||(3353913-3354050)
chr4 (30-169)||(17485716-17485854)
chr4 (30-168)||(45235044-45235181)
chr4 (124-172)||(15864766-15864814)
[»] scaffold0230 (1 HSPs)
scaffold0230 (30-172)||(12744-12886)
[»] chr8 (16 HSPs)
chr8 (30-172)||(21955332-21955474)
chr8 (30-172)||(21381349-21381492)
chr8 (30-172)||(21099606-21099748)
chr8 (30-172)||(23910697-23910840)
chr8 (30-172)||(8313724-8313867)
chr8 (30-172)||(8323663-8323809)
chr8 (30-172)||(17619998-17620141)
chr8 (30-172)||(20039803-20039946)
chr8 (30-172)||(21854594-21854737)
chr8 (41-172)||(21942265-21942395)
chr8 (41-172)||(16419435-16419567)
chr8 (30-169)||(20711727-20711867)
chr8 (41-172)||(19365288-19365419)
chr8 (34-172)||(20375071-20375209)
chr8 (124-172)||(22369222-22369270)
chr8 (124-172)||(19766808-19766856)
[»] chr7 (24 HSPs)
chr7 (30-172)||(23514325-23514467)
chr7 (30-172)||(9582171-9582313)
chr7 (30-172)||(14550354-14550496)
chr7 (30-172)||(8717122-8717265)
chr7 (30-172)||(13673113-13673256)
chr7 (30-172)||(18594081-18594224)
chr7 (30-172)||(18617460-18617603)
chr7 (30-172)||(16150297-16150441)
chr7 (30-172)||(539574-539716)
chr7 (30-172)||(10432557-10432699)
chr7 (30-172)||(13657180-13657323)
chr7 (41-172)||(16466442-16466573)
chr7 (41-169)||(11927735-11927863)
chr7 (30-172)||(12566278-12566418)
chr7 (30-172)||(13355496-13355636)
chr7 (41-172)||(16531364-16531493)
chr7 (41-172)||(16634169-16634298)
chr7 (31-172)||(48802669-48802807)
chr7 (32-172)||(4311998-4312136)
chr7 (30-164)||(20107558-20107690)
chr7 (41-154)||(8782823-8782933)
chr7 (124-172)||(824903-824951)
chr7 (124-172)||(15207471-15207519)
chr7 (124-172)||(15917668-15917716)
[»] chr5 (18 HSPs)
chr5 (30-172)||(23711492-23711634)
chr5 (30-161)||(20791531-20791662)
chr5 (30-172)||(15734791-15734934)
chr5 (30-172)||(20596644-20596787)
chr5 (30-172)||(20602930-20603073)
chr5 (30-172)||(20609221-20609364)
chr5 (30-165)||(24939793-24939928)
chr5 (30-172)||(20621419-20621562)
chr5 (30-172)||(18072157-18072300)
chr5 (30-172)||(23747307-23747450)
chr5 (30-172)||(24953988-24954132)
chr5 (30-172)||(24219091-24219233)
chr5 (30-172)||(20445644-20445788)
chr5 (30-172)||(23601458-23601601)
chr5 (30-172)||(20574720-20574859)
chr5 (30-172)||(21281732-21281868)
chr5 (124-172)||(22854836-22854884)
chr5 (34-98)||(22947769-22947833)
[»] chr1 (8 HSPs)
chr1 (30-172)||(27046132-27046274)
chr1 (30-165)||(20236732-20236867)
chr1 (30-172)||(21799478-21799621)
chr1 (30-172)||(17095416-17095560)
chr1 (30-172)||(3989352-3989495)
chr1 (31-144)||(8652334-8652444)
chr1 (41-104)||(52939442-52939504)
chr1 (34-172)||(8948376-8948512)
[»] chr2 (16 HSPs)
chr2 (30-172)||(12431-12572)
chr2 (30-170)||(116803-116943)
chr2 (30-172)||(25356768-25356911)
chr2 (30-172)||(22664343-22664487)
chr2 (30-172)||(22045475-22045618)
chr2 (30-172)||(24796099-24796242)
chr2 (30-172)||(16774907-16775051)
chr2 (30-172)||(17589664-17589808)
chr2 (30-172)||(27626850-27626986)
chr2 (30-172)||(25145579-25145722)
chr2 (30-169)||(24501357-24501493)
chr2 (30-164)||(24820834-24820971)
chr2 (30-169)||(24517135-24517275)
chr2 (31-172)||(25371775-25371913)
chr2 (34-172)||(25366575-25366710)
chr2 (34-76)||(23647286-23647328)
[»] scaffold0029 (1 HSPs)
scaffold0029 (30-172)||(122627-122769)
[»] scaffold0022 (1 HSPs)
scaffold0022 (33-165)||(24851-24983)
[»] scaffold0127 (1 HSPs)
scaffold0127 (30-172)||(2-146)
[»] scaffold0404 (1 HSPs)
scaffold0404 (30-172)||(295-439)
[»] scaffold0004 (3 HSPs)
scaffold0004 (30-174)||(252683-252828)
scaffold0004 (30-172)||(355309-355453)
scaffold0004 (124-172)||(18872-18920)
[»] scaffold0035 (1 HSPs)
scaffold0035 (30-172)||(51307-51450)
[»] scaffold0020 (2 HSPs)
scaffold0020 (30-172)||(115904-116047)
scaffold0020 (30-172)||(120208-120351)
[»] scaffold0215 (1 HSPs)
scaffold0215 (90-165)||(7843-7918)
[»] scaffold0206 (1 HSPs)
scaffold0206 (30-172)||(17359-17502)
[»] scaffold0374 (1 HSPs)
scaffold0374 (30-172)||(9449-9594)
[»] scaffold0974 (1 HSPs)
scaffold0974 (41-172)||(371-502)
[»] scaffold0679 (1 HSPs)
scaffold0679 (30-172)||(7269-7411)
[»] scaffold0037 (2 HSPs)
scaffold0037 (43-164)||(44715-44837)
scaffold0037 (43-164)||(52104-52226)
[»] scaffold0346 (1 HSPs)
scaffold0346 (30-169)||(4424-4565)
[»] scaffold0032 (1 HSPs)
scaffold0032 (41-172)||(90533-90663)
[»] scaffold0220 (1 HSPs)
scaffold0220 (30-172)||(9135-9275)
[»] scaffold0216 (1 HSPs)
scaffold0216 (30-172)||(10678-10818)
[»] scaffold0034 (1 HSPs)
scaffold0034 (41-172)||(59446-59578)
[»] scaffold0328 (1 HSPs)
scaffold0328 (30-172)||(1055-1195)
[»] scaffold0026 (1 HSPs)
scaffold0026 (30-172)||(10416-10552)
[»] scaffold0156 (1 HSPs)
scaffold0156 (41-172)||(101-231)
[»] scaffold0402 (1 HSPs)
scaffold0402 (30-172)||(7055-7195)
[»] scaffold0059 (1 HSPs)
scaffold0059 (30-172)||(11651-11790)
[»] scaffold0013 (1 HSPs)
scaffold0013 (30-172)||(233608-233747)
[»] scaffold0018 (1 HSPs)
scaffold0018 (30-164)||(19000-19137)
[»] scaffold1941 (1 HSPs)
scaffold1941 (30-169)||(1053-1193)
[»] scaffold0162 (1 HSPs)
scaffold0162 (30-169)||(35918-36058)
[»] scaffold0278 (2 HSPs)
scaffold0278 (30-170)||(13862-13999)
scaffold0278 (30-170)||(17196-17333)
[»] scaffold0117 (1 HSPs)
scaffold0117 (30-169)||(32366-32502)
[»] scaffold0566 (1 HSPs)
scaffold0566 (124-172)||(1874-1922)
[»] scaffold0375 (1 HSPs)
scaffold0375 (124-172)||(11792-11840)
[»] scaffold0506 (1 HSPs)
scaffold0506 (41-104)||(3108-3170)
[»] scaffold1225 (1 HSPs)
scaffold1225 (34-83)||(957-1006)
[»] scaffold0384 (1 HSPs)
scaffold0384 (124-172)||(9841-9889)


Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 192 - 403
Target Start/End: Complemental strand, 32950704 - 32950493
Alignment:
Q  192 cagaaagcggaaagctaaagacagaatgcagaaagctgaagaccgaaagcagaaagctaagataatgaagttcgaaagaagccagccacccaggatcgct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32950704 cagaaagcggaaagctaaagacagaatgcagaaagctgaagaccgaaagcagaaagctaagataatgaagttcgaaagaagccagccacccaggatcgct 32950605  T
Q  292 aaggcagcttaagtttaaaagcagttggaggcttaagatgaagaaaatccatgtggtttatgttttggccctttttagtcttttatttaaatattgattt 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32950604 aaggcagcttaagtttaaaagcagttggaggcttaagatgaagaaaatccatgtggtttatgttttggccctttatagtcttttatttaaatattgattt 32950505  T
Q  392 aactgctctctg 403  Q
    ||||||||||||    
T  32950504 aactgctctctg 32950493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 22166364 - 22166507
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  22166364 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaata 22166463  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22166464 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 22166507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 15698956 - 15698813
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15698956 atatcaagaagacttaaaacacaagagtttgctttgatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 15698857  T
Q  130 aaa-ttagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||| |||||||||| ||||||||||||||||||||||| |||||    
T  15698856 aaatttagctacttgaccatgccttttacaataaaacacaacaa 15698813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 22062320 - 22062451
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062320 atatcaagaagacttaaaacacaagagtttactttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 22062419  T
Q  130 aaattagctacttaaccatgccttttacaata 161  Q
    ||||||||||||||||||||||||||||||||    
T  22062420 aaattagctacttaaccatgccttttacaata 22062451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 20017043 - 20017186
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  20017043 atatcaagaagacttaaaacacaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaata 20017142  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  20017143 aaaagtagctacttaaccatgccttttacaataaaacaaaacaa 20017186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 20169643 - 20169501
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatc-aaataagaggagacaatgaaaattttgtgtcatgatattttcaata 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| |||||||||    
T  20169643 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaaataagaggagacaatgaaaatttt-tgtcttgattttttcaata 20169545  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||| |||||||||||||||||||| |||||    
T  20169544 aaaattagctacttaactatgccttttacaataaaacagaacaa 20169501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 22243213 - 22243070
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||    
T  22243213 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcacgatattttcaata 22243114  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||| ||||||||| |||||||||| ||||||    
T  22243113 aaaattagctacttaaacatgcctttcacaataaaacgaaacaa 22243070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 24856059 - 24856202
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatg-aaaattttgtgtcatgatattttcaata 128  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| |||||||||||||||||| |||||||||    
T  24856059 atatcaagaagacttaaaacacaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaaattttgtgtcatgatgttttcaata 24856158  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||    
T  24856159 aaaattagctacttaactatgccttttaccataaaacagaacaa 24856202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 15850796 - 15850939
Alignment:
Q  30 atatcaagaagactt-aaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaat 127  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| || ||||||||||||||||    
T  15850796 atatcaagaagactttaaaacacaagagtttgctttcatgtacaagaatcaa-caaataagaggagacaatggaaatttttgtatcatgatattttcaat 15850894  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||    
T  15850895 aaaaattagctatttaaccatgccttttgcaataaaacaaaacaa 15850939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 22767930 - 22768076
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatga---tattttca 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||||||||||||   | ||||||    
T  22767930 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagagtcaacaaaataagaggagacaatgaaaatttttgtgtcatgatttttttttca 22768029  T
Q  126 ataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||    
T  22768030 ataaaaattagctacttaactatgccttttacaataaaacagaacaa 22768076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 25625157 - 25625025
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagcta 139  Q
    ||||||||||||||||||| ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||||||| |||||    
T  25625157 acttaaaacacaagagtttactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaataaaaataagcta 25625058  T
Q  140 cttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||| |||||||||||||||||    
T  25625057 cttaaccatgcctttcacaataaaacaaaacaa 25625025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 18011268 - 18011124
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaat-gaaaattttgtgtcatgatat-tttcaat 127  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||| | | ||| ||||||||||||||  |||||||| ||||||||| | ||||| |    
T  18011268 atatcaggaaaacttaaaacacaagagtttactttcatgtacaagaaacgaccaactaagaggagacaataaaaaattttatgtcatgatttatttcatt 18011169  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||  || || ||||||||||||||||||||||||||||||||    
T  18011168 aaaaacaagatagttaaccatgccttttacaataaaacaaaacaa 18011124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 18853412 - 18853273
Alignment:
Q  33 tcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaa 131  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| ||||||||||||    
T  18853412 tcaagaaaacttaagacacaagagtttactttcatgtacaagaaataaccaattaagaggagacaat-aaaaatttatgtcatgatatttttcaataaaa 18853314  T
Q  132 attagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |  |||||||||| |||| |||| |||||||||||||||||    
T  18853313 acaagctacttaatcatgtctttcacaataaaacaaaacaa 18853273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 21561241 - 21561385
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagac-aatgaaaattttgtgtcatgata-ttttcaat 127  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||  || ||| ||||||||||| ||| |||| ||| |||||||||| ||||||||    
T  21561241 atatcaagaaaacttaaaacacaagagtttattttcatgtacaagaaataaccaattaagaggagacaaataaaaaatttatgtcatgatatttttcaat 21561340  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||  |||||||||| |||| |||| |||||||||||||||||    
T  21561341 aaaaacaagctacttaatcatgtctttcacaataaaacaaaacaa 21561385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 29595103 - 29594963
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaata 128  Q
    |||||||||| |||||||| |||||||||  |||||||||||||||| ||| ||| |||||||||||||  |||||||| || |||| | | ||||| ||    
T  29595103 atatcaagaaaacttaaaatacaagagttcactttcatgtacaagaaacaaccaactaagaggagacaaaaaaaattttatgccatgctttatttcatta 29595004  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaa 169  Q
    ||||  |||||||||||||||||||| |||| |||||||||    
T  29595003 aaaacaagctacttaaccatgcctttcacaagaaaacaaaa 29594963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 18447616 - 18447484
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| ||| | ||||| | || | ||  |||| ||| ||||||||| ||||||||||    
T  18447616 atatcaagaaaacttaaaacacaagagtttactttcatgtacaagaaacaa-ccaataaaaagaaaaaaataaaaatttatgtcatgat-ttttcaataa 18447519  T
Q  130 aaattagctacttaaccatgccttttacaataaaa 164  Q
    |||  |||||||||| |||||||||||||||||||    
T  18447518 aaacaagctacttaatcatgccttttacaataaaa 18447484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 30672540 - 30672680
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| ||| ||| | |||||||||||  |||| ||| ||||||   ||| |||||||    
T  30672540 atatcaagaaaacttaaaacacaagagtttactttcatgtacaagaaacaaccaatttagaggagacaactaaaaatttatgtcat--aattctcaataa 30672637  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| |||| ||||  |||| |||||||||||    
T  30672638 aaacaagctacttaatcatgtctttcgcaattaaacaaaacaa 30672680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 25632162 - 25632302
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||| ||| ||| | |||||||||||  |||| ||| |||||| || ||| ||||||    
T  25632162 atatcaagaaaacttaaaacacaagagttcactttcatgtacaagaaacaaccaatttagaggagacaa-caaaaatttatgtcataat-tttacaataa 25632259  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  || ||||||| ||||||||| ||||||||| |||||||    
T  25632260 aaacaagttacttaatcatgcctttcacaataaaataaaacaa 25632302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 18188396 - 18188530
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| |||||||||||  ||||||  |||||||||||| || ||||    | |||||||||||  |||||||  |||||| || ||||||||||    
T  18188396 atatcaagaaaacttaaaacac--gagtttaatttcatgtacaacaaccaat----ttagaggagacaacaaaaattta-tgtcataat-ttttcaataa 18188487  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| |||| |||| |||||||||||| ||||    
T  18188488 aaacaagctacttaatcatgtctttcacaataaaacaacacaa 18188530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 11218932 - 11218884
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||  ||||| |||  |||||||||||||||||||||||||||    
T  11218932 caataaaaacaagctatttattcatgccttttacaataaaacaaaacaa 11218884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 143; Significance: 5e-75; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 6814269 - 6814127
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6814269 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 6814170  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6814169 aaattagctacttaaccatgccttttacaataaaacaaaacaa 6814127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 10603287 - 10603429
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10603287 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 10603386  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10603387 aaattagctacttaaccatgccttttacaataaaacaaaacaa 10603429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 13505322 - 13505464
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13505322 atatcaagaagacttaaaacacaagagtttgcttttatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 13505421  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13505422 aaattagctacttaaccatgccttttacaataaaacaaaacaa 13505464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 11946815 - 11946672
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgcttt-catgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaata 128  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11946815 atatcaagaagacttaaaacacaagagtttgcttttcatgtataagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaata 11946716  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11946715 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 11946672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 7599755 - 7599612
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  7599755 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaata 7599656  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  7599655 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 7599612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 9361784 - 9361919
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9361784 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 9361883  T
Q  130 aaattagctacttaaccatgccttttacaataaaac 165  Q
    |||||||||||||||||||| |||||||||||||||    
T  9361884 aaattagctacttaaccatgtcttttacaataaaac 9361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 12187890 - 12188033
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatg-aaaattttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  12187890 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaaattttgtgtcatgatatttttaata 12187989  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  12187990 aaaattagctacttaaccatgccttttacaataaaacagaacaa 12188033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 12194304 - 12194447
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  12194304 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatatttttaata 12194403  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  12194404 aaaattagctacttaaccatgccttttacaataaaacagaacaa 12194447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 22165126 - 22165269
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaata 128  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  22165126 atatcaagaaaacttagaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaata 22165225  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22165226 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 22165269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 16449548 - 16449692
Alignment:
Q  30 atatcaagaagacttaaaacacaagagttt-gctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttg-tgtcatgatattttcaat 127  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||    
T  16449548 atatcaagaagacttaaaacacaagagttttgctttcatgtacaagaatcaatcgaataggaggagacaatgaaaatttttatgtcatgatattttcaat 16449647  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  16449648 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 16449692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 10146412 - 10146268
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatc-aaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaat 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||| ||||||||    
T  10146412 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaaataagaggagacaatgaaaatttttgtgtcttgattttttcaat 10146313  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  10146312 aaaaattagctacttaactatgccttttacaataaaacagaacaa 10146268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 15644489 - 15644346
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  15644489 atatcaagaaggcttaaaacacaagagtttgctttcgtgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaata 15644390  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  15644389 aaaattagctacttaatcatgccttttacaataaaacaaaacaa 15644346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 13188232 - 13188375
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  13188232 atatcaagaagacttaaaacacaagaatttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgattttttcaata 13188331  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||    
T  13188332 aaaattaactacttaactatgccttttacaataaaacagaacaa 13188375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 16655130 - 16654987
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||| ||||    
T  16655130 atatcaagaagacttaaaacacaagaatttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaaattttgtgtcatgatttttttaata 16655031  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  16655030 aaaattagctacttaactatgccttttacaataaaacaaaacaa 16654987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 37941779 - 37941636
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaa-attttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||||||||| ||||    
T  37941779 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaattttttgtgtcatgatatttttaata 37941680  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||| ||||||||| |||||||||| ||||||    
T  37941679 aaaattagctacttaaacatgcctttcacaataaaacgaaacaa 37941636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 4370090 - 4369947
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||||| |||||||||    
T  4370090 atatcaagaaaacttaaaacacaagagtttactttcatgtacaagaattaaccaattaagaggagacaataaaaattttgtgtcatgatatttttcaata 4369991  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||    
T  4369990 aaaataagctacttaaccatgcctttcacaataaaacagaacaa 4369947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 10160987 - 10161134
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatatt----ttc 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||| ||    |||    
T  10160987 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcttgatttttttcttc 10161086  T
Q  125 aataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  10161087 aataaaaattagctacttaactatgccttttacaataaaacagaacaa 10161134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 15557775 - 15557903
Alignment:
Q  45 aaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaataaaaattagctactta 143  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  15557775 aaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcacgatattttcaataaaaattagctactta 15557874  T
Q  144 accatgccttttacaataaaacaaaacaa 172  Q
    | ||||||||| |||||||||| ||||||    
T  15557875 aacatgcctttcacaataaaacgaaacaa 15557903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 16374292 - 16374438
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa--ttttgtgtcatga--tattttca 125  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| |  |||| ||||||||  | |||| |    
T  16374292 atattaagaagacttaaaacacaagagtttgctttcatgtacaagaataaacaaaataagaggagacaatgaagattttttttgtcatgattttttttta 16374391  T
Q  126 ataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  16374392 ataaaaattagctacttaactatgccttttacaataaaacaaaacaa 16374438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 12777335 - 12777470
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||| ||||| ||||||| ||||||||||| ||||||||||||||||| || ||| ||||| |||||||| |||| ||| |||||||||| |||||||||    
T  12777335 atattaagaaaacttaaagcacaagagtttactttcatgtacaagaattaaccaattaagatgagacaataaaaaatttatgtcatgatatttttcaata 12777434  T
Q  129 aaaattagctacttaaccatgccttttacaataaaa 164  Q
    ||||| |||||||||||||||| ||| |||||||||    
T  12777435 aaaataagctacttaaccatgcttttcacaataaaa 12777470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 13690057 - 13689914
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaata 128  Q
    |||||||||| ||| |||| |||||||||  |||||||||||||||| | | ||| |||||||||||||| |||||| | ||||||||| | ||||| ||    
T  13690057 atatcaagaaaactaaaaatacaagagttcactttcatgtacaagaaacgaccaactaagaggagacaataaaaattatatgtcatgatttatttcatta 13689958  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  ||||||||||||||||||||||||||||||||||||||    
T  13689957 aaaacaagctacttaaccatgccttttacaataaaacaaaacaa 13689914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 13694302 - 13694159
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaata 128  Q
    |||||||||| ||| |||| | |||||||  |||||||||||||||| | | ||| |||||||||||||| |||||||| ||||||||| | ||||| ||    
T  13694302 atatcaagaaaactaaaaatataagagttcactttcatgtacaagaaacgaccaactaagaggagacaataaaaattttatgtcatgatttatttcatta 13694203  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  ||||||||||||||||||||||||||||||||||||||    
T  13694202 aaaacaagctacttaaccatgccttttacaataaaacaaaacaa 13694159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 12161019 - 12161148
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctac 140  Q
    ||||||||||||||||||| |||||||||||||||| | | ||| |||||||||||||| |||| ||| ||||||||| |||||||||||||  ||||||    
T  12161019 acttaaaacacaagagtttactttcatgtacaagaaacgaccaa-taagaggagacaataaaaaatttatgtcatgat-ttttcaataaaaacaagctac 12161116  T
Q  141 ttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  ||||||||| |||||||||||||||||    
T  12161117 ttagtcatgcctttcacaataaaacaaaacaa 12161148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 13089623 - 13089746
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| |||||||| |||||||||  ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||    
T  13089623 atatcaagaaaacttaaaatacaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatagttttcaata 13089722  T
Q  129 aaaattagctacttaaccatgcct 152  Q
    ||||  ||||||||||||||||||    
T  13089723 aaaacaagctacttaaccatgcct 13089746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 13097098 - 13096975
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| |||||||| |||||||||  ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||    
T  13097098 atatcaagaaaacttaaaatacaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaata 13096999  T
Q  129 aaaattagctacttaaccatgcct 152  Q
    ||||  ||||||||||||||||||    
T  13096998 aaaaaaagctacttaaccatgcct 13096975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 10547697 - 10547827
Alignment:
Q  41 acttaaaacacaagag-tttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagcta 139  Q
    |||||||||||||||| ||| |||||||||||||||| ||| | | |||||||||||||| |||||||| ||||||||| || ||||||||||  |||||    
T  10547697 acttaaaacacaagagctttactttcatgtacaagaaacaa-ctagtaagaggagacaataaaaattttatgtcatgat-ttctcaataaaaacaagcta 10547794  T
Q  140 cttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||| |||| |||| |||||||||||||||||    
T  10547795 cttaatcatgtctttcacaataaaacaaaacaa 10547827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 3246329 - 3246463
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||| ||| ||| | |||||||||||  ||||||   ||||||   ||||| |||||    
T  3246329 atatcaagaaaacttaaaacacaagagttcactttcatgtacaagaaacaaccaatttagaggagacaacaaaaatt---tgtcat--aattttgaataa 3246423  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaa 169  Q
    |||  |||||||||| |||||||||  |||||||||||||    
T  3246424 aaacaagctacttaatcatgcctttcgcaataaaacaaaa 3246463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 17387159 - 17387020
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||| ||| ||| | |||||| ||||  |||| ||| ||||||   |||||||||||    
T  17387159 atatcaagaaaacttaaaacacaagagttcactttcatgtacaagaaacaaccaatttagaggatacaa-caaaaatttatgtcat--aattttcaataa 17387063  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| |||| ||||  |||| |||||||||||    
T  17387062 aaacaagctacttaatcatgtctttctcaattaaacaaaacaa 17387020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 11866184 - 11866054
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatt-ttgtgtcatgatattttcaataaaaattagcta 139  Q
    ||||||||||||||| ||| | |||||||||||||| | | ||| ||| |||||||||| ||||   || | ||||||| |||||||||||||  || ||    
T  11866184 acttaaaacacaagaatttacgttcatgtacaagaaacgaccaa-taaaaggagacaataaaaaaaattatttcatgat-ttttcaataaaaaagaggta 11866087  T
Q  140 cttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||| ||||||||| |||||||||||||||||    
T  11866086 cttaatcatgcctttcacaataaaacaaaacaa 11866054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 154
Target Start/End: Complemental strand, 1992104 - 1991999
Alignment:
Q  46 aaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaac 145  Q
    |||||||||||||  |||||||||||||||| ||| ||| | |||||||||||  |||| ||| ||||||   ||||||||||||||  ||||||||||     
T  1992104 aaacacaagagttcactttcatgtacaagaaacaaccaatttagaggagacaa-caaaaatttatgtcat--aattttcaataaaaacaagctacttaat 1992008  T
Q  146 catgccttt 154  Q
    |||||||||    
T  1992007 catgccttt 1991999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 20157430 - 20157553
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||  |||| ||||||||||| |||  || ||||||||| |||  |||| ||| |||||| || |||| |  ||    
T  20157430 atatcaagaaaacttaaaacacaagagttcacttttatgtacaagaaacaactaattaagaggag-caaataaaaatttatgtcataattttttaataaa 20157528  T
Q  130 aaattagctacttaaccatgccttt 154  Q
    |||  |||||||||| |||||||||    
T  20157529 aaacaagctacttaatcatgccttt 20157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 3340114 - 3340162
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||  |||| ||||| |||||||||||||||||||||||||||    
T  3340114 caataaaaacaagctgcttaatcatgccttttacaataaaacaaaacaa 3340162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 13196349 - 13196396
Alignment:
Q  125 aataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||  |||||||||  |||||||||||||||||||||||||||    
T  13196349 aataaaaagaagctacttattcatgccttttacaataaaacaaaacaa 13196396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 15629866 - 15629914
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||  |||| ||||| ||||||||||||||| |||||||||||    
T  15629866 caataaaaacgagctgcttaatcatgccttttacaatgaaacaaaacaa 15629914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 15945936 - 15945892
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaa 168  Q
    |||||||||| |||| ||||  |||||||||||||||||||||||    
T  15945936 caataaaaataagctgcttattcatgccttttacaataaaacaaa 15945892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 11497429 - 11497571
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11497429 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 11497528  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11497529 aaattagctacttaaccatgccttttacaataaaacaaaacaa 11497571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 15253747 - 15253605
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  15253747 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaattaaaattttgtgtcatgatattttcaataa 15253648  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15253647 aaattagctacttaaccatgccttttacaataaaacaaaacaa 15253605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 42710548 - 42710690
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42710548 atatcaagaagacttaaaacacaagagtttgcttttatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgccatgatattttcaataa 42710647  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42710648 aaattagctacttaaccatgccttttacaataaaacaaaacaa 42710690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 13822314 - 13822171
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  13822314 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaata 13822215  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13822214 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 13822171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 22110359 - 22110216
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaata 128  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||    
T  22110359 atatcaagaaggcttaaaacacaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaata 22110260  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22110259 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 22110216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 15348629 - 15348771
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| ||||||| |    
T  15348629 atatcaagaaaacttaaaacacaagagtttactttcatgtacaagaaataaccaattaagaggagacaat-aaaaatttatgtcatgatatttttcaaca 15348727  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  |||||||||| ||||||||| |||||||||||||||||    
T  15348728 aaaagaagctacttaatcatgcctttcacaataaaacaaaacaa 15348771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 18291414 - 18291274
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| ||| ||| | |||||||| ||| |||| ||| ||||||||| ||||||||||    
T  18291414 atatcaagaaaacttaaaacacaagagtttactttcatgtacaagaaacaaccaatttagaggagataat-aaaaatttatgtcatgat-ttttcaataa 18291317  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| ||||||||| |||||||||||||||||    
T  18291316 aaacaagctacttaatcatgcctttcacaataaaacaaaacaa 18291274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 38426132 - 38426000
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagcta 139  Q
    ||||||||||||||||||| ||||||| ||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||||||  |||||    
T  38426132 acttaaaacacaagagtttactttcatatacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaataaaaacaagcta 38426033  T
Q  140 cttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||| ||||||||||| |||||    
T  38426032 cttaaccatgcctttcacaataaaacagaacaa 38426000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 18082273 - 18082409
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||| ||| ||||||| ||||||||||| |||||||||||| |||| || ||| |||||||||||||| |||| ||| |||||||||| |||||||||    
T  18082273 atatcaggaaaacttaaagcacaagagtttactttcatgtacaggaattaaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaata 18082372  T
Q  129 aaaa-ttagctacttaaccatgccttttacaataaaa 164  Q
    ||||   ||||||||||||||||||||||||||||||    
T  18082373 aaaacaaagctacttaaccatgccttttacaataaaa 18082409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 10630146 - 10630003
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgat-attttcaata 128  Q
    |||||||||| |||||||| |||||||||  ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||  |||||||||    
T  10630146 atatcaagaaaacttaaaatacaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatgtttttcaata 10630047  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  ||||||||||||||| |||| ||||||||||| |||||    
T  10630046 aaaacaagctacttaaccatgtctttcacaataaaacagaacaa 10630003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 3354050 - 3353913
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaat-gaaaattttgtgtcatgata-ttttcaat 127  Q
    |||||| ||| |||||||||||||||||||  |||||||||||||||  || ||| ||||||||||| ||  |||| ||| |||||||||| ||||||||    
T  3354050 atatcaggaaaacttaaaacacaagagtttattttcatgtacaagaaataaccaattaagaggagacgataaaaaaatttatgtcatgatatttttcaat 3353951  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaac 165  Q
    |||||  |||||||||||||||||||| ||||||||||    
T  3353950 aaaaacaagctacttaaccatgcctttcacaataaaac 3353913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 17485716 - 17485854
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgcttt-catgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaata 128  Q
    |||||||||| ||||||||||||||||||  |||| |||||||||||| |||  || | |||||||||||  |||||||  |||||| || |||||||||    
T  17485716 atatcaagaaaacttaaaacacaagagttcacttttcatgtacaagaaacaactaatttagaggagacaacaaaaattta-tgtcataat-ttttcaata 17485813  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaa 169  Q
    ||||  ||||| |||| ||||||||| ||||||||||||||    
T  17485814 aaaacaagctatttaatcatgcctttcacaataaaacaaaa 17485854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 45235044 - 45235181
Alignment:
Q  30 atatcaagaa-gacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaat- 127  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||| |||  || | |||||||||||  |||| ||| ||||||   |||||||||     
T  45235044 atatcaagaaagacttaaaacacaagagttcactttcatgtacaagaaacaacaaatttagaggagacaa-caaaaatttatgtcat--aattttcaata 45235140  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaa 168  Q
    |||||| || ||||||| |||||||||  |||| |||||||    
T  45235141 aaaaataagatacttaatcatgcctttcgcaattaaacaaa 45235181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 15864814 - 15864766
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  15864814 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 15864766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 12886 - 12744
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12886 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttccataa 12787  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12786 aaattagctacttaaccatgccttttacaataaaacaaaacaa 12744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 3e-70; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 21955474 - 21955332
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21955474 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 21955375  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  21955374 aaattagctacttaaccatgccttttacaatgaaacaaaacaa 21955332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 21381492 - 21381349
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  21381492 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaata 21381393  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  21381392 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 21381349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 21099606 - 21099748
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  21099606 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcgtgatattttccataa 21099705  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  21099706 aaattagctacttaaccatgccttttagaataaaacaaaacaa 21099748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 23910840 - 23910697
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaata 128  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  23910840 atatcaagaagacttaaaacacaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaata 23910741  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23910740 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 23910697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 8313867 - 8313724
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  8313867 atatcaagaaggcttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaata 8313768  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  8313767 aaaattagctacttaatcatgccttttacaataaaacaaaacaa 8313724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 8323663 - 8323809
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatg-aaaattttgtgtcatga---tattttca 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||   | ||||||    
T  8323663 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaaattttgtgtcatgatttttttttca 8323762  T
Q  126 ataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||    
T  8323763 ataaaaattagctgcttaactatgccttttacaataaaacaaaacaa 8323809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 17620141 - 17619998
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| |||||||| |||||||||  ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||    
T  17620141 atatcaagaaaacttaaaatacaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaata 17620042  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  |||||||||||||||||||| ||||||||||| |||||    
T  17620041 aaaacaagctacttaaccatgcctttcacaataaaacagaacaa 17619998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 20039803 - 20039946
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| |||||||| |||||||||  ||||||||||||||||  || ||| |||||||||||||| | || ||| |||||||||| |||||||||    
T  20039803 atatcaagaaaacttaaaatacaagagttcactttcatgtacaagaaataaccaattaagaggagacaataagaaatttatgtcatgatatttttcaata 20039902  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  |||||||||||||||||||| ||||||||||| |||||    
T  20039903 aaaacaagctacttaaccatgcctttcacaataaaacagaacaa 20039946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 21854594 - 21854737
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| |||||||| |||||||||  ||||||||||||||||  || ||| |||||| ||||||| |||| ||| |||||||||| |||||||||    
T  21854594 atatcaagaaaacttaaaatacaagagttcactttcatgtacaagaaataaccaattaagagtagacaataaaaaatttatgtcatgatatttttcaata 21854693  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  |||||||||||||||||||| ||||||||||| |||||    
T  21854694 aaaacaagctacttaaccatgcctttcacaataaaacagaacaa 21854737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 21942265 - 21942395
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctac 140  Q
    ||||||||||||||||||| ||||||||||||||||| || | | |||||||||||||| |||| ||| |||||| || |||||||||||||  ||||||    
T  21942265 acttaaaacacaagagtttactttcatgtacaagaattaacctattaagaggagacaataaaaaatttatgtcataat-ttttcaataaaaacaagctac 21942363  T
Q  141 ttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||| |||||||||  |||| |||||||||||    
T  21942364 ttaatcatgcctttcgcaattaaacaaaacaa 21942395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 16419435 - 16419567
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaat---gaaaattttgtgtcatgatattttcaataaaaattagc 137  Q
    ||||||||||||||||||| |||||||||||||||| | | | ||||||||||||||||    ||||  || ||||||||| |||||||||||||  |||    
T  16419435 acttaaaacacaagagtttactttcatgtacaagaaacga-ccaataagaggagacaataaaaaaaaaattatgtcatgat-ttttcaataaaaacaagc 16419532  T
Q  138 tacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||| ||||||||| || || |||||||||||    
T  16419533 tacttaatcatgcctttcactatgaaacaaaacaa 16419567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 20711867 - 20711727
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaata 128  Q
    ||||| |||| |||||||| | |||||||  |||||||||||||||| ||| ||| | |||||||||||| ||| |||| || |||| | | ||||| ||    
T  20711867 atatcgagaaaacttaaaataaaagagttcactttcatgtacaagaaacaaccaactgagaggagacaataaaatttttatgccatgctttatttcatta 20711768  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaa 169  Q
    ||||  |||||||||||||||||||| |||| |||||||||    
T  20711767 aaaacaagctacttaaccatgcctttcacaagaaaacaaaa 20711727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 19365419 - 19365288
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatt--ttgtgtcatgatattttcaataaaaattagct 138  Q
    |||| |||||||| |||||  ||||||||||||||| | | ||| |||||||||||||| ||||    || ||||||||| |||||||||||||  ||||    
T  19365419 acttgaaacacaatagtttattttcatgtacaagaaacgaccaa-taagaggagacaataaaaaaaaattatgtcatgat-ttttcaataaaaacaagct 19365322  T
Q  139 acttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||| ||||||||| |||||||||||||||||    
T  19365321 acttaatcatgcctttcacaataaaacaaaacaa 19365288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 20375209 - 20375071
Alignment:
Q  34 caagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaat 133  Q
    |||||| ||| ||||||||||| ||   ||||||||||||||| ||| ||| | |||||| ||||  |||| ||| |||||| | ||||||||||||||     
T  20375209 caagaacactcaaaacacaagaattcaatttcatgtacaagaaacaaccaatttagaggaaacaacaaaaaatttatgtcataaaattttcaataaaaac 20375110  T
Q  134 tagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
     |||  ||||| |||||||||  ||||||| || |||||    
T  20375109 aagccgcttaatcatgcctttcgcaataaatcataacaa 20375071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 22369270 - 22369222
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||| |||| ||||  |||||||||||||||||||||||||||    
T  22369270 caataaaaataagctgcttattcatgccttttacaataaaacaaaacaa 22369222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 19766856 - 19766808
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  19766856 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 19766808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 3e-70; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 23514467 - 23514325
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23514467 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 23514368  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  23514367 aaattagctacttaaccatgtcttttacaataaaacaaaacaa 23514325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 9582313 - 9582171
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9582313 atatcaagaagacttaaaacacaagagtttgctttcttgtacaagaatcaatcaaataaaaggagacaatgaaaattttgtgtcatgatattttcaataa 9582214  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  9582213 aaaatagctacttaaccatgccttttacaataaaacaaaacaa 9582171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 14550496 - 14550354
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  14550496 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataaaaggagacaatgaaaattttgtgtcatgatattttcaataa 14550397  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14550396 aaattagctacttaaccatgccttttacaataaaacaaaacaa 14550354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 8717265 - 8717122
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  8717265 atatcaagaagacttaaaacacaagagtttgctttcatgtacaataatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaata 8717166  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  8717165 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 8717122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 13673256 - 13673113
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  13673256 atatcaagaagacttaaaacacaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaata 13673157  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13673156 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 13673113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 18594081 - 18594224
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaata 128  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||    
T  18594081 atatcaagaagacctaaaacacaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaata 18594180  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18594181 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 18594224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 18617603 - 18617460
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaata 128  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||    
T  18617603 atatcaagaagacctaaaacacaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaata 18617504  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18617503 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 18617460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 16150297 - 16150441
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgata-ttttcaat 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  16150297 atatcaagaagacttaaaacacaagagtttgcttttatgtacaagaatcaatcaaataagaggagacaatgaaaatttttgtgtcatgatatttttcaat 16150396  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||  |||||||||||||||||||| |||||||||||||||||    
T  16150397 aaaaacaagctacttaaccatgcctttcacaataaaacaaaacaa 16150441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 539574 - 539716
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatga-tattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||| || | | | |||||||||||||||| |||||||| |||||||| |  ||||| ||    
T  539574 atatcaagaagacttaaaacacaagagtttgctttcatgtacaaaaaacga-ccaataagaggagacaataaaaattttatgtcatgattgatttcatta 539672  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  ||||||||||||||||||||||||||||||||||||||    
T  539673 aaaacaagctacttaaccatgccttttacaataaaacaaaacaa 539716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 10432557 - 10432699
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||    
T  10432557 atatcaagaaaacttaaaacacaagagtatactttcatgtacaagaaataaccaattaagaggagacaat-aaaaatttatgtcatgatacttttcaata 10432655  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||    
T  10432656 aaaataagctacttaactatgcctttcacaataaaacaaaacaa 10432699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 13657323 - 13657180
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaata 128  Q
    |||||||||| ||| |||| |||||||||  |||||||||||||||| | | ||| |||||||||||||| |||||| | ||||||||| | ||||| ||    
T  13657323 atatcaagaaaactaaaaatacaagagttcactttcatgtacaagaaacgaccaactaagaggagacaataaaaattatatgtcatgatttatttcatta 13657224  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  ||||||||||||||||||||||||||||||||||||||    
T  13657223 aaaacaagctacttaaccatgccttttacaataaaacaaaacaa 13657180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 16466442 - 16466573
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagcta 139  Q
    |||||||||||||||||||  ||||||||||||||| | | ||| |||||||||||||| |||||||| |||||||||   ||||| ||||||  |||||    
T  16466442 acttaaaacacaagagtttaatttcatgtacaagaaacgaccaa-taagaggagacaataaaaattttatgtcatgattgatttcattaaaaacaagcta 16466540  T
Q  140 cttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||    
T  16466541 cttaaccatgccttttacaataaaacaaaacaa 16466573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 41 - 169
Target Start/End: Original strand, 11927735 - 11927863
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagcta 139  Q
    ||||||||||||||||||| |||||||||||||||| | | ||| |||||||||| ||| |||||||| |||||||||   ||||| ||||||  |||||    
T  11927735 acttaaaacacaagagtttactttcatgtacaagaaacgaccaa-taagaggagataataaaaattttatgtcatgattgatttcattaaaaacaagcta 11927833  T
Q  140 cttaaccatgccttttacaataaaacaaaa 169  Q
    ||||||||||||||||||||||||||||||    
T  11927834 cttaaccatgccttttacaataaaacaaaa 11927863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 12566418 - 12566278
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||| ||| ||| | |||||||||||| |||  ||| ||||||||| ||||||||||    
T  12566418 atatcaagaaaacttaaaacataagagtttactttcatgtacaagaaacaaccaatttagaggagacaat-aaacatttatgtcatgat-ttttcaataa 12566321  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  || || |||| ||||||||| |||||||||||||||||    
T  12566320 aaacaagttatttaatcatgcctttcacaataaaacaaaacaa 12566278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 13355636 - 13355496
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| |||||||||||||| ||||  ||||||||||||||| ||| ||| | |||||||||||  |||| ||| |||||| || ||||||||||    
T  13355636 atatcaagaaaacttaaaacacaagtgtttaatttcatgtacaagaaacaaccaatttagaggagacaa-caaaaatttatgtcataat-ttttcaataa 13355539  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| ||||||||| |||||||||||||||||    
T  13355538 aaacaagctacttaatcatgcctttcacaataaaacaaaacaa 13355496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 16531493 - 16531364
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctac 140  Q
    ||||||||||| | ||||| |||||||||||||||| | | ||| ||| |||||||||| |||| ||| ||||||||| |||||||||||||  ||||||    
T  16531493 acttaaaacactatagtttactttcatgtacaagaaacgaccaa-taaaaggagacaataaaaaatttatgtcatgat-ttttcaataaaaacaagctac 16531396  T
Q  141 ttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||| ||||||||| |||||||||||||||||    
T  16531395 ttaatcatgcctttcacaataaaacaaaacaa 16531364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 16634169 - 16634298
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctac 140  Q
    ||||||||||| | ||||| |||||||||||||||| | | ||| ||| |||||||||| |||| ||| ||||||||| |||||||||||||  ||||||    
T  16634169 acttaaaacactatagtttactttcatgtacaagaaacgaccaa-taaaaggagacaataaaaaatttatgtcatgat-ttttcaataaaaacaagctac 16634266  T
Q  141 ttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||| ||||||||| |||||||||||||||||    
T  16634267 ttaatcatgcctttcacaataaaacaaaacaa 16634298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 172
Target Start/End: Original strand, 48802669 - 48802807
Alignment:
Q  31 tatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaa 130  Q
    ||||||||| ||||||||||||||| ||  |||||||||||||||| ||||||| | |||||||||||  |||| ||| ||||||   ||||||||||||    
T  48802669 tatcaagaaaacttaaaacacaagatttcactttcatgtacaagaaacaatcaatttagaggagacaa-caaaaatttatgtcat--aattttcaataaa 48802765  T
Q  131 aattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||  |||||||||| |||||||||  |||| |||||||||||    
T  48802766 aacaagctacttaatcatgcctttcgcaattaaacaaaacaa 48802807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 4312136 - 4311998
Alignment:
Q  32 atcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaa 131  Q
    |||||||  |||||||||| |||||||  |||||||||||||||| ||| ||| | |||||||||||  |||| ||| ||||||   |||||||||||||    
T  4312136 atcaagagaacttaaaacaaaagagttcactttcatgtacaagaaacaaccaatttagaggagacaa-caaaaatttatgtcat--aattttcaataaaa 4312040  T
Q  132 attagctacttaaccatgccttttacaa-taaaacaaaacaa 172  Q
    |  |||||||||| ||||||||| |||| | |||||||||||    
T  4312039 acaagctacttaatcatgcctttcacaatttaaacaaaacaa 4311998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 20107690 - 20107558
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| |||||||| |||||||||  |||||||||||||||| ||| ||| | |||||||||||  |||| ||| |||||| || |||||||||     
T  20107690 atatcaagaaaacttaaaatacaagagttcactttcatgtacaagaaacaaccaacttagaggagacaa-caaaaatttatgtcataat-ttttcaatag 20107593  T
Q  130 aaattagctacttaaccatgccttttacaataaaa 164  Q
    |||  |||||||||| |||| ||||  ||||||||    
T  20107592 aaacaagctacttaatcatgtctttcgcaataaaa 20107558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 8782823 - 8782933
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctac 140  Q
    ||||||||||||||| ||  |||||||||||||||| ||| | | | |||||||||||  |||| ||| ||||||   ||||||||||||||  ||||||    
T  8782823 acttaaaacacaagaattcactttcatgtacaagaaacaaccgatttagaggagacaa-caaaaatttatgtcat--aattttcaataaaaacaagctac 8782919  T
Q  141 ttaaccatgccttt 154  Q
    |||| |||||||||    
T  8782920 ttaatcatgccttt 8782933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 824951 - 824903
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  824951 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 824903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 15207471 - 15207519
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  15207471 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 15207519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 15917668 - 15917716
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  15917668 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 15917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 3e-70; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 23711492 - 23711634
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23711492 atatcaagaagacttaaaacacaagagtttgcttttatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgccatgatattttcaataa 23711591  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23711592 aaattagctacttaaccatgccttttacaataaaacaaaacaa 23711634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 20791531 - 20791662
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20791531 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 20791630  T
Q  130 aaattagctacttaaccatgccttttacaata 161  Q
    ||||||||||||||||||||||||||||||||    
T  20791631 aaattagctacttaaccatgccttttacaata 20791662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 15734934 - 15734791
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  15734934 atatcaagaagacttaaaacacaagagtttgctttcatgtacaataatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaata 15734835  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15734834 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 15734791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 20596644 - 20596787
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  20596644 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaata 20596743  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  20596744 aaaattagctacttacccatgccttttacaataaaacaaaacaa 20596787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 20602930 - 20603073
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  20602930 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaata 20603029  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  20603030 aaaattagctacttacccatgccttttacaataaaacaaaacaa 20603073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 20609221 - 20609364
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  20609221 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaata 20609320  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  20609321 aaaattagctacttacccatgccttttacaataaaacaaaacaa 20609364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 24939928 - 24939793
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  24939928 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaagttttgtgtcatgatattttcaataa 24939829  T
Q  130 aaattagctacttaaccatgccttttacaataaaac 165  Q
    ||||||||||||||||||||||||||||||||||||    
T  24939828 aaattagctacttaaccatgccttttacaataaaac 24939793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 20621562 - 20621419
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  20621562 atatcaagaagacttaaaacacaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaata 20621463  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  20621462 taaattagctacttaaccatgccttttacaataaaacaaaacaa 20621419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 18072300 - 18072157
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaa-attttgtgtcatgatattttcaata 128  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  |||||||||||||| |||||||||    
T  18072300 atatcaagaaggcttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaattttttgtgtcatgatgttttcaata 18072201  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  18072200 aaaattagctacttaatcatgccttttacaataaaacaaaacaa 18072157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 23747450 - 23747307
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  23747450 atatcaagaagacttaaaacacaagagtttgcttttatgcacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaata 23747351  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||    
T  23747350 aaaattagctacttaactatgccttttaccataaaacaaaacaa 23747307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 24953988 - 24954132
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  24953988 atatcaagaagacttaaaacacaagagtttgcttttatgcataagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgattttttcaata 24954087  T
Q  129 aaaattagctacttaaccatgcc-ttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  24954088 aaaattagctacttaactatgcctttttacaataaaacaaaacaa 24954132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 24219233 - 24219091
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||    
T  24219233 atatcaagaaaacttaaaacacaagagtttactttcatgtacaagaaataaccaattaagaggagacaat-aaaaatttatgtcatgatatttttcaata 24219135  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  |||||||||| ||||||||| |||||||||| ||||||    
T  24219134 aaaacaagctacttaatcatgcctttcacaataaaacgaaacaa 24219091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 20445644 - 20445788
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaat-gaaaattttgtgtcatgata-ttttcaat 127  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||||| || ||| ||||||||||||||  ||||  || |||||||||| ||||||||    
T  20445644 atatcaagaaaacttaaagcacaagagtttactttcatgtacaagaattaaccaattaagaggagacaataaaaaaaattatgtcatgatatttttcaat 20445743  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||| |||||||||||||||| ||| ||||||||||| |||||    
T  20445744 aaaaataagctacttaaccatgcatttcacaataaaacagaacaa 20445788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 23601458 - 23601601
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| |||||||| |||||||||  ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||    
T  23601458 atatcaagaaaacttaaaatacaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaata 23601557  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||   |||||||||||||| ||||| ||||||||||| |||||    
T  23601558 aaatcaagctacttaaccatccctttcacaataaaacagaacaa 23601601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 20574859 - 20574720
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||| ||| ||| | |||||||||||  |||| ||| ||||||   |||||||||||    
T  20574859 atatcaagaatacttaaaacacaagagttcactttcatgtacaagaaacaaccaatttagaggagacaa-caaaaatttatgtcat--aattttcaataa 20574763  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| |||| ||||  |||| |||||||||||    
T  20574762 aaacaagctacttaatcatgtctttcgcaattaaacaaaacaa 20574720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 21281732 - 21281868
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| |||||||||||||||||||    |||||||||| || ||||    | |||||||||||  |||||||  |||||| || ||||||||||    
T  21281732 atatcaagaaaacttaaaacacaagagtttaacatcatgtacaacaaccaat----ttagaggagacaacaaaaattta-tgtcataat-ttttcaataa 21281825  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| ||||||||| |||||||||||||||||    
T  21281826 aaacaagctacttaatcatgcctttcacaataaaacaaaacaa 21281868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 22854884 - 22854836
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  22854884 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 22854836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 22947833 - 22947769
Alignment:
Q  34 caagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaa 98  Q
    |||||| ||||||||||| ||| ||  |||||||||||||||| ||| ||| | |||||||||||    
T  22947833 caagaacacttaaaacacgagaattcactttcatgtacaagaaacaaccaatttagaggagacaa 22947769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 3e-70; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 27046274 - 27046132
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27046274 atatcaagaagacttaaaacacaagagtttgcttttatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgccatgatattttcaataa 27046175  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27046174 aaattagctacttaaccatgccttttacaataaaacaaaacaa 27046132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 20236867 - 20236732
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  20236867 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaaccaaataagaggagataatgaaaattttgtgtcatgatattttcaataa 20236768  T
Q  130 aaattagctacttaaccatgccttttacaataaaac 165  Q
     |||||||||||| ||||||||||||||||||||||    
T  20236767 gaattagctacttgaccatgccttttacaataaaac 20236732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 21799478 - 21799621
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  21799478 atatcaagaaggcttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaata 21799577  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||| |||||||||| ||||||||||||||||    
T  21799578 aaaattagctacttaatcatgcctttttcaataaaacaaaacaa 21799621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 17095416 - 17095560
Alignment:
Q  30 atatcaagaagacttaaaa-cacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaat 127  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||| |||||||    
T  17095416 atatcaagaagactaaaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcacgatactttcaat 17095515  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||    
T  17095516 aaaaattagctacttaaacatgcctttcacaataaaacgaaacaa 17095560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 3989495 - 3989352
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||| || ||| |||||||||||||| |||| ||| |||||||||| |||||||||    
T  3989495 atatcaagaaaacttaaaacacaagagtttacttttatgtacaagaattaaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaata 3989396  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||| |||||||||||||||||||| |||||||||||||||||    
T  3989395 aaaataagctacttaaccatgcctttcacaataaaacaaaacaa 3989352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 8652444 - 8652334
Alignment:
Q  31 tatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaa 130  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||| ||| ||| | |||||| ||||  |||| ||| ||||||   ||||||||||||    
T  8652444 tatcaagaaaacttaaaacacaagagttcactttcatgtacaagaaacaaccaatttagaggatacaa-caaaaatttatgtcat--aattttcaataaa 8652348  T
Q  131 aattagctacttaa 144  Q
    ||  ||||||||||    
T  8652347 aacaagctacttaa 8652334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 52939442 - 52939504
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa 104  Q
    ||||||||||||||||||| |||||||||||||||| | | | |||||||||||||||| ||||    
T  52939442 acttaaaacacaagagtttactttcatgtacaagaaacga-ccaataagaggagacaataaaaa 52939504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 172
Target Start/End: Original strand, 8948376 - 8948512
Alignment:
Q  34 caagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaat 133  Q
    |||||| |||||||||||||||  |  |||||||||||||||| | | ||  | ||| |||||||  |||| ||| ||||||   ||||||||||||||     
T  8948376 caagaacacttaaaacacaagaaatcactttcatgtacaagaaacgaccattttagaagagacaacaaaaaatttatgtcat--aattttcaataaaaac 8948473  T
Q  134 tagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
     |||| ||||| |||| ||||  ||||||||||||||||    
T  8948474 aagctgcttaatcatgtctttcgcaataaaacaaaacaa 8948512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 8e-68; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 12431 - 12572
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12431 atatcaagaagacttaaaa-acaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 12529  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12530 aaattagctacttaaccatgccttttacaataaaacaaaacaa 12572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 116943 - 116803
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  116943 atatcaagaagacttaaaacacaagagtttgcttttatgtacaataatcaaccaaataagaggagacaatgaaaattttatgtcatgatattttcaataa 116844  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaac 170  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  116843 aaattagctacttaaccatgccttttacaataaaacaaaac 116803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 25356911 - 25356768
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  25356911 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgattttttcaata 25356812  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25356811 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 25356768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 22664487 - 22664343
Alignment:
Q  30 atatcaagaagacttaaaacacaagagttt-gctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttg-tgtcatgatattttcaat 127  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||    
T  22664487 atatcaagaagacttaaaacacaagagttttgctttcatgtacaagaatcaatcgaataggaggagacaatgaaaatttttatgtcatgatattttcaat 22664388  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22664387 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 22664343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 22045475 - 22045618
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  22045475 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgattttttcaata 22045574  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||| |||||||||||||||||||| |||||    
T  22045575 aaaattagctacttaactatgccttttacaataaaacagaacaa 22045618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 24796099 - 24796242
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  24796099 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgattttttcaata 24796198  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||| ||||||||||||| |||||||||||||||||||| |||||    
T  24796199 aaagttagctacttaactatgccttttacaataaaacagaacaa 24796242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 16775051 - 16774907
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattt-tgtgtcatgatattttcaata 128  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||    
T  16775051 atatcaagaaggcttaaaacacaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttgtgtgtcatgattttttcaata 16774952  T
Q  129 aaaattagctacttaaccatgcc-ttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  16774951 aaaattagctacttaactatgcctttttacaataaaacaaaacaa 16774907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 17589808 - 17589664
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatga-tattttcaat 127  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||  || ||||||||||||||||||| ||||||||||||| | ||||||||    
T  17589808 atatcaagaaaacttaaaacacaagagtttgctttcatgcacaagaatcaacaaattaagaggagacaatgaaaatttttgtgtcatgatttttttcaat 17589709  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  17589708 aaaaattagctacttaactatgccttttacaataaaacagaacaa 17589664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 27626986 - 27626850
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaata 128  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||       ||||||||||||||||||||||||| |||||||||| |||||||||    
T  27626986 atatcaagaaggcttaaaacacaagagtttgcttttatgtacaagaa-------aataagaggagacaatgaaaatttttgtgtcatgatgttttcaata 27626894  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  27626893 aaaattagctacttaatcatgccttttacaataaaacaaaacaa 27626850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 25145579 - 25145722
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| |||||||| |||||||||  ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||    
T  25145579 atatcaagaaaacttaaaatacaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaata 25145678  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  |||||||||||||||||||| ||||||||||| |||||    
T  25145679 aaaacaagctacttaaccatgcctttcacaataaaacagaacaa 25145722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 24501493 - 24501357
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||| ||| ||| | |||||||||||  |||| ||| ||||||   ||| |||||||    
T  24501493 atatcaagaatacttaaaacacaagagttcactttcatgtacaagaaacaaccaatttagaggagacaa-caaaaatttatgtcat--aattctcaataa 24501397  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaa 169  Q
    |||  |||||||||| ||||||||| |||| |||||||||    
T  24501396 aaacaagctacttaatcatgcctttcacaacaaaacaaaa 24501357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 24820834 - 24820971
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaat--gaaaattttgtgtcatgatatttt-caa 126  Q
    |||||| ||| | ||||||||||||||||| ||||||||||||||||  || ||| ||||||||||||||   ||||  || ||| || ||||||| |||    
T  24820834 atatcaggaaaatttaaaacacaagagtttactttcatgtacaagaaataaccaattaagaggagacaataaaaaaaaattatgtaataatattttccaa 24820933  T
Q  127 taaaaattagctacttaaccatgccttttacaataaaa 164  Q
    ||||||  |||||||||||||||||||| |||||||||    
T  24820934 taaaaacaagctacttaaccatgcctttcacaataaaa 24820971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 24517135 - 24517275
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaata 128  Q
    ||||| |||| |||||||| | |||||||  |||||||||||||||| ||| ||| | |||||||||||| ||| |||| || |||| | | ||||| ||    
T  24517135 atatcgagaaaacttaaaataaaagagttcactttcatgtacaagaaacaaccaactgagaggagacaataaaatttttatgccatgctttatttcatta 24517234  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaa 169  Q
    ||||  |||||||||||||||||||| |||| |||||||||    
T  24517235 aaaacaagctacttaaccatgcctttcacaagaaaacaaaa 24517275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 172
Target Start/End: Original strand, 25371775 - 25371913
Alignment:
Q  31 tatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaa 130  Q
    ||||||||| |||||||||||||| |||  |||||||||| ||||| ||| ||  | |||||||||||  |||||||  |||||| ||  ||||||||||    
T  25371775 tatcaagaaaacttaaaacacaagtgttcactttcatgtagaagaaacaaccagcttagaggagacaacaaaaattta-tgtcataat--tttcaataaa 25371871  T
Q  131 aattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  ||||||||| ||||||||| ||||| |||||||||||    
T  25371872 aataggctacttaatcatgcctttcacaattaaacaaaacaa 25371913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 172
Target Start/End: Original strand, 25366575 - 25366710
Alignment:
Q  34 caagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaat 133  Q
    |||||| ||||| |||||||||  |  |||||||||||||||| ||| | | | |||||||||||  |||||||  |||||| ||  ||||||||||||     
T  25366575 caagaatacttataacacaagaaatcactttcatgtacaagaaacaaccgatttagaggagacaacaaaaattta-tgtcataat--tttcaataaaaac 25366671  T
Q  134 tagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
     |||||||||| |||||||||  ||| ||||||||||||    
T  25366672 aagctacttaatcatgcctttcgcaacaaaacaaaacaa 25366710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 23647328 - 23647286
Alignment:
Q  34 caagaagacttaaaacacaagagtttgctttcatgtacaagaa 76  Q
    |||||| ||||||||||||||||||  ||||||||||||||||    
T  23647328 caagaacacttaaaacacaagagttcactttcatgtacaagaa 23647286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 122769 - 122627
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  122769 atatcaagaagacttaaaacacaagagtttgcttttatgtacatgaatcaatcaaataagtggagacaatgaaaattttgtgccatgatattttcaataa 122670  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  122669 aaattagctacttaaccatgccttttacaataaaacaaaacaa 122627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 33 - 165
Target Start/End: Complemental strand, 24983 - 24851
Alignment:
Q  33 tcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaa 131  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24983 tcaagaagacttaaaacacaagagtttgcttttatgtacaagaatcaa-caaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaa 24885  T
Q  132 attagctacttaaccatgccttttacaataaaac 165  Q
    ||||||||||||||||||||||| ||||||||||    
T  24884 attagctacttaaccatgcctttcacaataaaac 24851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 2 - 146
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatga-tattttcaat 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||| ||||||||||||| | ||||||||    
T  2 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaacaaaataagaggcgacaatgaaaatttttgtgtcatgatttttttcaat 101  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    | |||||||||||||||||||||||||||||||||||||||||||    
T  102 agaaattagctacttaaccatgccttttacaataaaacaaaacaa 146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 439 - 295
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaata 128  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  439 atatcaagaagacttaaaacacaagagtttgcttttatgcacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgattttttcaata 340  T
Q  129 aaaattagctacttaaccatgcc-ttttacaataaaacaaaacaa 172  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  339 aaaattagctacttaactatgcctttttacaataaaacaaaacaa 295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 86; Significance: 6e-41; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 30 - 174
Target Start/End: Original strand, 252683 - 252828
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaata 128  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||| | | ||| |||||||||||||| |||||||| ||||||||| | ||||| ||    
T  252683 atatcaggaaaacttaaaacacaagagtttactttcatgtacaagaaacgaacaactaagaggagacaataaaaattttatgtcatgatttatttcatta 252782  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaatg 174  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||    
T  252783 aaaacaagctacttaaccatgccttttacaataaaacaaaacaatg 252828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 355309 - 355453
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaat-tttgtgtcatgatatttt-caat 127  Q
    ||||| |||| ||| |||| |||||||||  ||||||||||||||||  || ||| |||||||||||||| ||||  ||| ||||| |||||||| ||||    
T  355309 atatcgagaaaactaaaaatacaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaaatttatgtcacgatatttttcaat 355408  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||    
T  355409 aaaaataagctacttaaccatgcctttcacaataaaacagaacaa 355453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 18872 - 18920
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  18872 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 18920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 51307 - 51450
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||| ||||| ||||||| ||||||||||| ||||||||||||||||| ||  || |||||||||||||| | |||||| |||||||||| |||||||||    
T  51307 atataaagaaaacttaaagcacaagagtttactttcatgtacaagaattaactaattaagaggagacaataagaattttatgtcatgatatttttcaata 51406  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||    
T  51407 aaaataagctacttaaccatgtctttcacaataaaacaaaacaa 51450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 116047 - 115904
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaata 128  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||| | | ||| |||||||||||||| |||||||| ||||||||| | ||||  ||    
T  116047 atatcaggaaaacttaaaacacaagagtttactttcatgtacaagaaacgaccaactaagaggagacaataaaaattttatgtcatgatttatttcttta 115948  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  ||||||||||||||||||||||||||||||||||||||    
T  115947 aaaacaagctacttaaccatgccttttacaataaaacaaaacaa 115904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 120351 - 120208
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaata 128  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||| | | ||| |||||||||||||| |||||||| ||||||||| | ||||  ||    
T  120351 atatcaggaaaacttaaaacacaagagtttactttcatgtacaagaaacgaccaactaagaggagacaataaaaattttatgtcatgatttatttcttta 120252  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  ||||||||||||||||||||||||||||||||||||||    
T  120251 aaaacaagctacttaaccatgccttttacaataaaacaaaacaa 120208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 7843 - 7918
Alignment:
Q  90 aggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttttacaataaaac 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7843 aggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttttacaataaaac 7918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 17359 - 17502
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaata 128  Q
    |||||||||| |||||||| |||||||||  ||||||||||||||||  || ||| |||||| ||||||| |||| ||| |||||||||| |||||||||    
T  17359 atatcaagaaaacttaaaatacaagagttcactttcatgtacaagaaataaccaattaagagcagacaataaaaaatttatgtcatgatatttttcaata 17458  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  |||||||||||||||||||| ||||||||||| |||||    
T  17459 aaaacaagctacttaaccatgcctttcacaataaaacagaacaa 17502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 9594 - 9449
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagac-aatgaaaattttgtgtcatgata-ttttcaat 127  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||  || ||| |||||| |||| ||| |||| ||| |||||||||| ||||||||    
T  9594 atatcaagaaaacttaaaacacaagagtttactttcatgtacaagaaataaccaattaagagaagacaaataaaaaatttatgtcatgatatttttcaat 9495  T
Q  128 -aaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
     |||||| |||||||||||||||||||| ||||||||||| |||||    
T  9494 aaaaaataagctacttaaccatgcctttcacaataaaacagaacaa 9449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 502 - 371
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatatttt-caataaaaattagcta 139  Q
    ||||||||||||||||||| |||||||||||||||| | | ||| |||||||||||||| |||| ||| ||||||||| |||| |||||||||  |||||    
T  502 acttaaaacacaagagtttactttcatgtacaagaaacgaccaa-taagaggagacaataaaaaatttatgtcatgatttttttcaataaaaacaagcta 404  T
Q  140 cttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||| ||||||||| |||||||||||||||||    
T  403 cttaatcatgcctttcacaataaaacaaaacaa 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 7411 - 7269
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaata 128  Q
    |||||||||| |||||| | |||||||||  |||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| | ||||| ||    
T  7411 atatcaagaaaacttaagatacaagagttcactttcatgtacaagaaacaatcaactaagaggagacaat-aaaattttatgtcatgatttatttcatta 7313  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||  |||||||||| |||||||||  ||||||||||||||||    
T  7312 aaaacaagctacttaatcatgcctttcgcaataaaacaaaacaa 7269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 43 - 164
Target Start/End: Complemental strand, 44837 - 44715
Alignment:
Q  43 ttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctact 141  Q
    ||||||||||||||||| ||||||||||||||||| || ||| ||||||||||| || |||| ||| |||||||||| |||||||||||||  ||||||     
T  44837 ttaaaacacaagagtttactttcatgtacaagaattaaccaattaagaggagacgataaaaaatttatgtcatgatatttttcaataaaaacaagctacc 44738  T
Q  142 taaccatgccttttacaataaaa 164  Q
    ||||||||||||| |||||||||    
T  44737 taaccatgcctttcacaataaaa 44715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 43 - 164
Target Start/End: Complemental strand, 52226 - 52104
Alignment:
Q  43 ttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctact 141  Q
    ||||||||||||||||| ||||||||||||||||| || ||| ||||||||||| || |||| ||| |||||||||| |||||||||||||  ||||||     
T  52226 ttaaaacacaagagtttactttcatgtacaagaattaaccaattaagaggagacgataaaaaatttatgtcatgatatttttcaataaaaacaagctacc 52127  T
Q  142 taaccatgccttttacaataaaa 164  Q
    ||||||||||||| |||||||||    
T  52126 taaccatgcctttcacaataaaa 52104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 4424 - 4565
Alignment:
Q  30 atatcaagaagactt-aaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaat 127  Q
    |||||||||| |||| |||| |||||||||| |||||||||||||||| ||| ||| |||||||||||||| |||| ||| ||||||||| | ||||| |    
T  4424 atatcaagaaaactttaaaatacaagagtttactttcatgtacaagaaacaaccaactaagaggagacaataaaaaatttatgtcatgatttatttcatt 4523  T
Q  128 aaaaattagctacttaaccatgccttttacaataaaacaaaa 169  Q
    |||||  |||||||||||||||||||| |||| |||||||||    
T  4524 aaaaacaagctacttaaccatgcctttcacaacaaaacaaaa 4565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 90663 - 90533
Alignment:
Q  41 acttaaaacacaagagtttg-ctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagcta 139  Q
    |||||||||||||||||||  |||||||||||||||| | | ||| |||||||||||||| |||| ||| ||||||||| |||||||||||||  |||||    
T  90663 acttaaaacacaagagttttactttcatgtacaagaaacgaccaa-taagaggagacaattaaaaatttatgtcatgat-ttttcaataaaaacaagcta 90566  T
Q  140 cttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||| ||||||||| |||||||||||||||||    
T  90565 cttaatcatgcctttcacaataaaacaaaacaa 90533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 9135 - 9275
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||| ||| ||| | |||||||||||  |||| ||| |||||| || ||||||||||    
T  9135 atatcaagaaaacttaaaacacaagagtttaatttcatgtacaagaaacaaccaatttagaggagacaa-caaaaatttatgtcataat-ttttcaataa 9232  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| |||| |||| |||||||||||||||||    
T  9233 aaagaagctacttaatcatgtctttcacaataaaacaaaacaa 9275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 10818 - 10678
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| |||||||  |||||||||  |||||||||||||||| ||| ||| | |||||||||||| |||| ||| ||||||||| ||| ||||||    
T  10818 atatcaagaaaacttaaattacaagagttcactttcatgtacaagaaacaaccaatttagaggagacaat-aaaaatttatgtcatgat-tttccaataa 10721  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| ||||||||| |||||||||||||||||    
T  10720 aaacaagctacttaatcatgcctttcacaataaaacaaaacaa 10678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 59446 - 59578
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaat---gaaaattttgtgtcatgatattttcaataaaaattagc 137  Q
    ||||||||||||||||||| |||||||||||||||| ||| | ||||||||||||||||    ||||  || ||||||||| |||||||||||||  |||    
T  59446 acttaaaacacaagagtttactttcatgtacaagaaacaa-ccaataagaggagacaataaaaaaaaaattatgtcatgat-ttttcaataaaaacaagc 59543  T
Q  138 tacttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||||| ||||||||| |||||||||||||||||    
T  59544 tacttaatcatgcctttcacaataaaacaaaacaa 59578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 1055 - 1195
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||| ||| ||||||||||||||||||  |||||||||||||||| ||| ||| | ||||||||| |  |||| ||| |||||| || ||||||||||    
T  1055 atatcacgaaaacttaaaacacaagagttcactttcatgtacaagaaacaaccaatttagaggagacca-caaaaatttatgtcataat-ttttcaataa 1152  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| |||||||||| |||| |||||||||||    
T  1153 aaacaagctacttaatcatgccttttgcaattaaacaaaacaa 1195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 10552 - 10416
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    ||| ||| | |||||||||||  |||| ||| |||||| || ||||||||||    
T  10552 atatcaagaaaacttaaaacacaagagtttactttcatgtacaa----caaccaatttagaggagacaa-caaaaatttatgtcataat-ttttcaataa 10459  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| ||||||||| |||| ||||||||||||    
T  10458 aaacaagctacttaatcatgcctttcacaaaaaaacaaaacaa 10416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 231 - 101
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaat-gaaaattttgtgtcatgatattttcaataaaaattagcta 139  Q
    ||||||||||||||||||  ||||||||||||||||   | | ||||||||||||||||  ||||  || ||||||||| |||||||||||||  |||||    
T  231 acttaaaacacaagagttcactttcatgtacaagaaatga-ccaataagaggagacaataaaaaaaattatgtcatgat-ttttcaataaaaacaagcta 134  T
Q  140 cttaaccatgccttttacaataaaacaaaacaa 172  Q
    ||||| ||||||||| |||||||||||||||||    
T  133 cttaatcatgcctttcacaataaaacaaaacaa 101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 7195 - 7055
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||| | ||||||||||||||| ||  |||||||||||||||| ||| ||| | |||||||||||| |||| ||| ||||||   |||||||||||    
T  7195 atatcaaggaaacttaaaacacaagaattctctttcatgtacaagaaacaaccaatttagaggagacaataaaaaatttatgtcat--aattttcaataa 7098  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| |||||||||  ||| |||||| |||||    
T  7097 aaacaagctacttaatcatgcctttcgcaacaaaacataacaa 7055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 11790 - 11651
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||| ||| | | | |||||||||||  |||| ||| ||||||   |||||||||||    
T  11790 atatcaagaaaacttaaaacacaagagttcactttcatgtacaagaaacaaccgatttagaggagacaa-caaaaatttatgtcat--aattttcaataa 11694  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| |||||||||  ||| ||||||||||||    
T  11693 aaacaagctacttaatcatgcctttcgcaacaaaacaaaacaa 11651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 233608 - 233747
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||| ||| | | | |||||||||||  |||| ||| ||||||   |||||||||||    
T  233608 atatcaagaaaacttaaaacacaagagttcactttcatgtacaagaaacaaccgatttagaggagacaa-caaaaatttatgtcat--aattttcaataa 233704  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||  |||||||||| |||||||||  ||| ||||||||||||    
T  233705 aaacaagctacttaatcatgcctttcgcaacaaaacaaaacaa 233747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 19000 - 19137
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaat--gaaaattttgtgtcatgatatttt-caa 126  Q
    |||||| ||| | ||||||||||||||||| ||||||||||||||||  || ||| ||||||||||||||   ||||  || ||| || ||||||| |||    
T  19000 atatcaggaaaatttaaaacacaagagtttactttcatgtacaagaaataaccaattaagaggagacaataaaaaaaaattatgtaataatattttccaa 19099  T
Q  127 taaaaattagctacttaaccatgccttttacaataaaa 164  Q
    ||||||  |||||||||||||||||||| |||||||||    
T  19100 taaaaacaagctacttaaccatgcctttcacaataaaa 19137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 1053 - 1193
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaata 128  Q
    ||||| |||| |||||||| | |||||||  |||||||||||||||| ||| ||| | |||||||||||| ||| |||| || |||| | | ||||| ||    
T  1053 atatcgagaaaacttaaaataaaagagttcactttcatgtacaagaaacaaccaactgagaggagacaataaaatttttatgccatgctttatttcatta 1152  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaa 169  Q
    ||||  |||||||||||||||||||| |||| |||||||||    
T  1153 aaaacaagctacttaaccatgcctttcacaagaaaacaaaa 1193  T

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Target: scaffold0162 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 35918 - 36058
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaata 128  Q
    |||||||||| ||||||||   |||||||  ||||||||||||||||  |  ||| |||||||||||||| |||||||| || |||| | | ||||| ||    
T  35918 atatcaagaaaacttaaaatgaaagagttcactttcatgtacaagaaatacccaactaagaggagacaataaaaattttatgccatgctttatttcatta 36017  T
Q  129 aaaattagctacttaaccatgccttttacaataaaacaaaa 169  Q
    ||||  |||||||||||||||||||| |||| |||||||||    
T  36018 aaaacaagctacttaaccatgcctttcacaagaaaacaaaa 36058  T

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Target: scaffold0278 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 13862 - 13999
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||  |||||||||||||||||  |||||||||||||||| |||  || | |||||||||||  |||| ||| ||||||   |||||||||||    
T  13862 atatcaagaatccttaaaacacaagagttcactttcatgtacaagaaacaactaatttagaggagacaa-caaaaatttatgtcat--aattttcaataa 13958  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaac 170  Q
    |||  |||||||||| |||||||||  |||| |||||||||    
T  13959 aaacaagctacttaatcatgcctttcgcaattaaacaaaac 13999  T

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Target: scaffold0278; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 17196 - 17333
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    ||||||||||  |||||||||||||||||  |||||||||||||||| |||  || | |||||||||||  |||||||  |||||  | |||||||||||    
T  17196 atatcaagaatccttaaaacacaagagttcactttcatgtacaagaaacaactaatttagaggagacaacaaaaattta-tgtca--aaattttcaataa 17292  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaac 170  Q
    |||  |||||||||| |||||||||  |||| |||||||||    
T  17293 aaacaagctacttaatcatgcctttcgcaattaaacaaaac 17333  T

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Target: scaffold0117 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 32366 - 32502
Alignment:
Q  30 atatcaagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataa 129  Q
    |||||||||| ||||||||||||||||||  ||||| |||||||||| ||| ||| | ||||||||| |  |||| ||| ||||||   |||||||||||    
T  32366 atatcaagaaaacttaaaacacaagagttcactttcgtgtacaagaaacaaccaatttagaggagac-agcaaaaatttatgtcat--aattttcaataa 32462  T
Q  130 aaattagctacttaaccatgccttttacaataaaacaaaa 169  Q
    |||  |||||||||| |||||||||  |||| ||||||||    
T  32463 aaacaagctacttaatcatgcctttcgcaattaaacaaaa 32502  T

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Target: scaffold0566 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 1922 - 1874
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||| |||| ||||  |||||||||||||||||||||||||||    
T  1922 caataaaaataagctccttattcatgccttttacaataaaacaaaacaa 1874  T

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Target: scaffold0375 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 11840 - 11792
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||  |||| ||||| |||||||||||||||||||||||||||    
T  11840 caataaaaacaagctgcttaatcatgccttttacaataaaacaaaacaa 11792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 3108 - 3170
Alignment:
Q  41 acttaaaacacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa 104  Q
    ||||||||||||||| ||| |||||||||||||||| | | | |||||||||||||||| ||||    
T  3108 acttaaaacacaagattttactttcatgtacaagaaacga-ccaataagaggagacaataaaaa 3170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1225 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 1006 - 957
Alignment:
Q  34 caagaagacttaaaacacaagagtttgctttcatgtacaagaatcaatca 83  Q
    |||||| ||||||||||||||| ||  |||||||||||||||| ||||||    
T  1006 caagaacacttaaaacacaagaattcactttcatgtacaagaaacaatca 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 9889 - 9841
Alignment:
Q  124 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 172  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  9889 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 9841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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