View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0436_low_6 (Length: 346)
Name: NF0436_low_6
Description: NF0436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0436_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 41301904 - 41301662
Alignment:
| Q |
96 |
agacaaaaccatatatgaaaataaatacttgtatattacattttcttatgaggctgactccaatttcaatactccgttcacatatattttgtcttctgaa |
195 |
Q |
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| T |
41301904 |
agacaaaaccatatatgaaaataaatacttgtatattacattttcttatgaggctgactccaatttcaatactccgttcacatatattttgtcttctgaa |
41301805 |
T |
|
| Q |
196 |
ctacatatacaattgtgtttgaataaat-cnnnnnnnnttatctttaactagataagacgagggaatgcagttaattctcaacattttctatattgttcg |
294 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41301804 |
ctacatatacaattgtgtttgaataaataaataaataattatctttaactagataagacgagggaatgcagttaattctcaacattttctatattgttcg |
41301705 |
T |
|
| Q |
295 |
ccgtggaagagatttatgactggtttctaagttatagaattat |
337 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41301704 |
ccgtggaagagatttatgactggtttctaagttatagaattat |
41301662 |
T |
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