View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0436_low_8 (Length: 325)
Name: NF0436_low_8
Description: NF0436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0436_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 85 - 237
Target Start/End: Complemental strand, 44821368 - 44821216
Alignment:
| Q |
85 |
cagagacagtgtttggtgaaggtgtagtagtggatttggtgagccagatagtgaaagatgaaaggaaggagatggaagaaaagagtgtgaatgtaaagag |
184 |
Q |
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| T |
44821368 |
cagagacagtgtttggtgaaggtgtagtagtggatttggtgagccagatagtgaaagatgaaaggaagaagatggaagaaaagagtgtgaatgtaaagag |
44821269 |
T |
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| Q |
185 |
taaaagtcaagtgggtttgaaagagaaacttctttgtctctccattgatgatg |
237 |
Q |
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| T |
44821268 |
taaaagtctagtgggtttgaaagagaaacttctttgtctctccattgatgatg |
44821216 |
T |
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