View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0437_low_23 (Length: 292)
Name: NF0437_low_23
Description: NF0437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0437_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 72 - 238
Target Start/End: Original strand, 37841705 - 37841871
Alignment:
| Q |
72 |
aaaacagcatcattctatgcttatagtgtttgtaatttgcagtagagggtgtagacaaggaagtgtacctttacctagctacttgggacaaaaataaaat |
171 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
37841705 |
aaaacagcatcattctatgcttatagtgtttgtaatttgcagtagagggtgtagacaaggaagtgtacctttacctagctacttgggacagaaataaaat |
37841804 |
T |
|
| Q |
172 |
acatacaatagtttatgttttagtggaataaatgtcagtgtcaatacatattgtacatgggatcgaa |
238 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37841805 |
acatacaataatttatgttttagtggaataaatgtcagtgtcaatacatattgtacatgggatcgaa |
37841871 |
T |
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