View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0438-3B-Insertion-5 (Length: 187)
Name: NF0438-3B-Insertion-5
Description: NF438-3B
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0438-3B-Insertion-5 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 21597533 - 21597354
Alignment:
| Q |
8 |
gaagcacatagtcaatttcaaagaatattttgatttgtggaatcaagatctttcaaaaagtgtttaatcaagagtttgtagaaagagagattgaaaagat |
107 |
Q |
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| T |
21597533 |
gaagcacatagtcaatttcaaagaatattttgatttgtggaatcaagatctttcaaaaagtgtttaatcaagagtttgtagaaagagagattgaaaaggt |
21597434 |
T |
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| Q |
108 |
ttgagagagtgattgtaaaattgattttgtaaatgaatatgatagtgattccttaccagctcatttgcatgtttggttat |
187 |
Q |
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| T |
21597433 |
ttgagagagtgattgtaaaattgattttgtaaatgaatatgatagtgattccttaccagctcgtttgcatgtttggttat |
21597354 |
T |
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