View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0438_2D_high_14 (Length: 288)

Name: NF0438_2D_high_14
Description: NF0438_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0438_2D_high_14
NF0438_2D_high_14
[»] chr2 (43 HSPs)
chr2 (103-268)||(23806022-23806187)
chr2 (102-268)||(23854809-23854975)
chr2 (102-268)||(26560697-26560863)
chr2 (104-268)||(22263334-22263498)
chr2 (102-268)||(15106136-15106302)
chr2 (116-262)||(39878185-39878331)
chr2 (102-268)||(42670862-42671028)
chr2 (102-268)||(17463160-17463326)
chr2 (102-268)||(17850729-17850895)
chr2 (102-268)||(26135886-26136052)
chr2 (102-268)||(19251539-19251705)
chr2 (103-268)||(13284551-13284716)
chr2 (102-268)||(20498815-20498980)
chr2 (102-256)||(33290118-33290272)
chr2 (106-220)||(26236200-26236313)
chr2 (215-268)||(26236277-26236330)
chr2 (215-268)||(30390602-30390655)
chr2 (102-170)||(20498986-20499054)
chr2 (102-162)||(13254566-13254626)
chr2 (102-170)||(34548642-34548710)
chr2 (102-145)||(21482146-21482189)
chr2 (210-256)||(39878361-39878407)
chr2 (215-256)||(20499004-20499045)
chr2 (215-252)||(26236205-26236242)
chr2 (102-170)||(15106308-15106376)
chr2 (102-170)||(17850655-17850723)
chr2 (102-170)||(19251711-19251779)
chr2 (102-170)||(22263260-22263328)
chr2 (102-170)||(26236336-26236404)
chr2 (102-170)||(26560623-26560691)
chr2 (102-165)||(23806198-23806261)
chr2 (218-256)||(13254695-13254733)
chr2 (102-148)||(23046776-23046822)
chr2 (102-148)||(44098885-44098931)
chr2 (109-170)||(13284484-13284545)
chr2 (102-170)||(12418964-12419032)
chr2 (102-170)||(12431024-12431092)
chr2 (215-255)||(15106327-15106367)
chr2 (215-255)||(23806212-23806252)
chr2 (215-255)||(26236355-26236395)
chr2 (215-251)||(26560632-26560668)
chr2 (102-170)||(30390528-30390596)
chr2 (215-255)||(30390537-30390577)
[»] chr5 (47 HSPs)
chr5 (102-268)||(7126060-7126226)
chr5 (103-268)||(24650843-24651007)
chr5 (102-268)||(20709355-20709521)
chr5 (102-268)||(31799783-31799949)
chr5 (102-268)||(14143970-14144136)
chr5 (106-268)||(17762355-17762517)
chr5 (102-268)||(993890-994055)
chr5 (102-268)||(4919133-4919299)
chr5 (102-268)||(24837312-24837478)
chr5 (102-268)||(29444875-29445041)
chr5 (102-268)||(41001496-41001662)
chr5 (102-268)||(6817265-6817430)
chr5 (102-266)||(24074372-24074535)
chr5 (106-220)||(14411770-14411884)
chr5 (102-220)||(27159148-27159266)
chr5 (102-268)||(18336537-18336691)
chr5 (5-82)||(24651057-24651134)
chr5 (172-268)||(23979041-23979136)
chr5 (102-261)||(22571227-22571386)
chr5 (26-82)||(24791761-24791817)
chr5 (102-170)||(6817191-6817259)
chr5 (102-170)||(23979142-23979210)
chr5 (215-268)||(14411847-14411901)
chr5 (102-170)||(20709281-20709349)
chr5 (215-264)||(27159135-27159185)
chr5 (102-170)||(7125986-7126054)
chr5 (102-170)||(14411907-14411975)
chr5 (102-170)||(24074543-24074611)
chr5 (102-170)||(24837238-24837306)
chr5 (211-255)||(30512361-30512405)
chr5 (211-255)||(30552701-30552745)
chr5 (102-170)||(41001422-41001490)
chr5 (102-169)||(4919059-4919126)
chr5 (102-145)||(29445072-29445115)
chr5 (102-145)||(31799709-31799752)
chr5 (102-140)||(18336727-18336765)
chr5 (215-256)||(6817200-6817241)
chr5 (215-256)||(20709290-20709331)
chr5 (220-261)||(20947056-20947097)
chr5 (215-256)||(23979160-23979201)
chr5 (102-170)||(993816-993884)
chr5 (215-255)||(4919068-4919108)
chr5 (102-170)||(14144142-14144210)
chr5 (106-170)||(27159063-27159127)
chr5 (215-251)||(27159068-27159104)
chr5 (215-251)||(31799718-31799754)
chr5 (102-170)||(41424585-41424653)
[»] chr8 (41 HSPs)
chr8 (102-268)||(17623030-17623196)
chr8 (102-268)||(10108439-10108605)
chr8 (102-268)||(30789650-30789816)
chr8 (102-262)||(21148086-21148245)
chr8 (102-268)||(2583389-2583555)
chr8 (102-267)||(42605822-42605987)
chr8 (104-266)||(5554940-5555102)
chr8 (102-262)||(14767656-14767816)
chr8 (102-268)||(22494454-22494619)
chr8 (102-268)||(26136754-26136920)
chr8 (108-268)||(7689598-7689758)
chr8 (107-268)||(43851807-43851968)
chr8 (102-260)||(14820363-14820521)
chr8 (102-268)||(42113127-42113293)
chr8 (106-268)||(43481457-43481619)
chr8 (174-268)||(26532926-26533020)
chr8 (102-195)||(21144721-21144814)
chr8 (102-170)||(10171384-10171452)
chr8 (102-170)||(17622957-17623024)
chr8 (102-170)||(21148006-21148074)
chr8 (102-170)||(26136926-26136994)
chr8 (102-170)||(42113053-42113121)
chr8 (215-256)||(42113062-42113103)
chr8 (106-170)||(7689764-7689828)
chr8 (102-170)||(10108611-10108679)
chr8 (215-255)||(10171403-10171443)
chr8 (102-170)||(14767576-14767644)
chr8 (102-170)||(14820535-14820603)
chr8 (215-255)||(26136945-26136985)
chr8 (102-170)||(43851733-43851801)
chr8 (102-145)||(40486697-40486740)
chr8 (215-245)||(35368684-35368714)
chr8 (120-170)||(40487656-40487706)
chr8 (189-266)||(22848464-22848540)
chr8 (219-256)||(30789589-30789626)
chr8 (102-139)||(38726756-38726793)
chr8 (215-255)||(7689783-7689823)
chr8 (215-251)||(21148015-21148051)
chr8 (215-255)||(22494644-22494684)
chr8 (102-170)||(26532852-26532920)
chr8 (215-255)||(43851742-43851782)
[»] scaffold0809 (2 HSPs)
scaffold0809 (102-268)||(1479-1645)
scaffold0809 (102-170)||(1651-1719)
[»] chr7 (50 HSPs)
chr7 (102-268)||(41600101-41600267)
chr7 (102-268)||(12006683-12006849)
chr7 (106-268)||(23704734-23704896)
chr7 (102-268)||(20419679-20419845)
chr7 (102-268)||(20458834-20459000)
chr7 (102-268)||(38879867-38880033)
chr7 (102-254)||(28218320-28218472)
chr7 (102-268)||(20963638-20963803)
chr7 (102-268)||(48672422-48672588)
chr7 (102-268)||(10409443-10409609)
chr7 (102-268)||(23383643-23383809)
chr7 (102-268)||(31851382-31851548)
chr7 (104-267)||(7658114-7658276)
chr7 (102-256)||(6465923-6466077)
chr7 (104-268)||(44816978-44817142)
chr7 (102-268)||(1250349-1250515)
chr7 (149-268)||(33162651-33162770)
chr7 (102-220)||(48648421-48648538)
chr7 (102-220)||(25772523-25772640)
chr7 (183-256)||(24194941-24195014)
chr7 (215-268)||(25772506-25772559)
chr7 (215-268)||(48648404-48648457)
chr7 (102-170)||(7658040-7658108)
chr7 (102-170)||(28218248-28218316)
chr7 (102-170)||(16995268-16995336)
chr7 (102-170)||(24195037-24195105)
chr7 (116-170)||(33162776-33162830)
chr7 (105-170)||(44816907-44816972)
chr7 (102-170)||(10409615-10409683)
chr7 (102-170)||(12006609-12006677)
chr7 (102-170)||(20458760-20458828)
chr7 (102-170)||(23704902-23704970)
chr7 (215-255)||(28218257-28218297)
chr7 (102-170)||(38879793-38879861)
chr7 (215-255)||(44816913-44816953)
chr7 (102-145)||(20963564-20963607)
chr7 (1-31)||(20459044-20459074)
chr7 (1-38)||(48672264-48672301)
chr7 (106-170)||(1250279-1250343)
chr7 (215-255)||(12006618-12006658)
chr7 (215-255)||(16995277-16995317)
chr7 (102-170)||(20419605-20419673)
chr7 (219-255)||(20458773-20458809)
chr7 (215-255)||(20963573-20963613)
chr7 (215-255)||(23704921-23704961)
chr7 (102-170)||(25772432-25772500)
chr7 (215-255)||(38879802-38879842)
chr7 (102-170)||(41600027-41600095)
chr7 (215-255)||(48648339-48648379)
chr7 (102-170)||(48672348-48672416)
[»] chr1 (46 HSPs)
chr1 (102-268)||(17606377-17606543)
chr1 (102-268)||(39711141-39711307)
chr1 (105-268)||(33628833-33628996)
chr1 (102-268)||(4907105-4907271)
chr1 (102-268)||(43539416-43539582)
chr1 (102-268)||(30299300-30299466)
chr1 (102-268)||(48072030-48072196)
chr1 (102-268)||(24467697-24467862)
chr1 (102-268)||(39970789-39970954)
chr1 (118-268)||(42510157-42510307)
chr1 (111-268)||(20995747-20995903)
chr1 (102-263)||(29696633-29696793)
chr1 (102-268)||(39826193-39826355)
chr1 (102-268)||(52058154-52058317)
chr1 (102-268)||(18462354-18462519)
chr1 (104-268)||(13229803-13229966)
chr1 (102-268)||(8292873-8293042)
chr1 (102-220)||(34749297-34749414)
chr1 (201-268)||(7473935-7474002)
chr1 (102-220)||(16294138-16294256)
chr1 (216-268)||(34749280-34749332)
chr1 (174-262)||(215061-215149)
chr1 (102-170)||(24467868-24467936)
chr1 (102-170)||(29696799-29696867)
chr1 (102-170)||(42510083-42510151)
chr1 (102-170)||(30299472-30299540)
chr1 (102-170)||(39970715-39970783)
chr1 (127-205)||(30780270-30780348)
chr1 (215-256)||(24467886-24467927)
chr1 (215-256)||(52058089-52058130)
chr1 (102-170)||(4907031-4907099)
chr1 (102-170)||(18462525-18462593)
chr1 (215-255)||(33628768-33628808)
chr1 (102-170)||(39826119-39826187)
chr1 (110-170)||(52058088-52058148)
chr1 (102-145)||(17606574-17606617)
chr1 (215-252)||(17501993-17502030)
chr1 (215-255)||(4907040-4907080)
chr1 (102-170)||(8293048-8293116)
chr1 (215-255)||(8293067-8293107)
chr1 (102-170)||(17501971-17502039)
chr1 (102-170)||(20995909-20995977)
chr1 (215-255)||(29696818-29696858)
chr1 (215-255)||(30299491-30299531)
chr1 (215-255)||(39826128-39826168)
chr1 (102-170)||(48072202-48072270)
[»] chr4 (50 HSPs)
chr4 (102-268)||(46046567-46046733)
chr4 (102-268)||(3018081-3018247)
chr4 (102-268)||(9396768-9396934)
chr4 (102-268)||(34064125-34064291)
chr4 (102-268)||(37012850-37013016)
chr4 (102-261)||(9516760-9516919)
chr4 (102-265)||(9619049-9619211)
chr4 (102-268)||(7819083-7819249)
chr4 (102-268)||(15640784-15640950)
chr4 (102-268)||(38574111-38574277)
chr4 (102-268)||(4355950-4356116)
chr4 (102-268)||(31090204-31090370)
chr4 (102-265)||(31944019-31944182)
chr4 (102-268)||(48580009-48580175)
chr4 (103-268)||(3273692-3273855)
chr4 (131-268)||(18667387-18667524)
chr4 (102-261)||(18713029-18713188)
chr4 (102-268)||(13132084-13132250)
chr4 (102-220)||(26252337-26252455)
chr4 (102-220)||(35376231-35376346)
chr4 (183-268)||(48259901-48259986)
chr4 (102-197)||(41947070-41947165)
chr4 (215-268)||(26252418-26252472)
chr4 (102-170)||(9396940-9397008)
chr4 (102-170)||(9619220-9619288)
chr4 (102-170)||(13132010-13132078)
chr4 (102-170)||(31944191-31944259)
chr4 (102-170)||(37012776-37012844)
chr4 (102-170)||(38574037-38574105)
chr4 (103-170)||(7819255-7819322)
chr4 (102-169)||(15640957-15641024)
chr4 (102-170)||(3273861-3273929)
chr4 (102-170)||(9516679-9516747)
chr4 (102-169)||(31090130-31090197)
chr4 (215-256)||(15640974-15641015)
chr4 (215-252)||(26252346-26252383)
chr4 (215-252)||(36888943-36888980)
chr4 (215-252)||(43312287-43312324)
chr4 (216-256)||(3273879-3273919)
chr4 (215-255)||(7819274-7819314)
chr4 (102-170)||(18713201-18713269)
chr4 (215-255)||(31090139-31090179)
chr4 (102-170)||(34064051-34064119)
chr4 (219-255)||(34064064-34064100)
chr4 (106-170)||(35376369-35376433)
chr4 (215-255)||(35376388-35376428)
chr4 (102-170)||(36888921-36888989)
chr4 (215-251)||(37012785-37012821)
chr4 (215-255)||(38574046-38574086)
chr4 (102-170)||(48259992-48260060)
[»] chr3 (51 HSPs)
chr3 (102-268)||(14262179-14262345)
chr3 (102-268)||(30500184-30500350)
chr3 (102-268)||(14161940-14162106)
chr3 (102-268)||(14171729-14171895)
chr3 (102-268)||(16722060-16722226)
chr3 (102-268)||(45969984-45970150)
chr3 (103-268)||(21632966-21633131)
chr3 (102-268)||(19112908-19113074)
chr3 (102-268)||(45003565-45003731)
chr3 (102-268)||(52552835-52552997)
chr3 (102-268)||(5800674-5800840)
chr3 (102-268)||(20853839-20854005)
chr3 (102-262)||(15328529-15328689)
chr3 (102-261)||(9267125-9267284)
chr3 (106-268)||(17465511-17465672)
chr3 (102-262)||(43572458-43572620)
chr3 (102-262)||(33372475-33372635)
chr3 (102-268)||(38283619-38283785)
chr3 (102-268)||(47575415-47575581)
chr3 (102-268)||(49986597-49986763)
chr3 (102-244)||(11003801-11003943)
chr3 (117-268)||(35995821-35995972)
chr3 (120-268)||(4204851-4204999)
chr3 (102-197)||(17649224-17649319)
chr3 (102-170)||(4204777-4204845)
chr3 (102-170)||(43572632-43572700)
chr3 (102-170)||(35995747-35995815)
chr3 (102-170)||(38283791-38283859)
chr3 (102-145)||(35740884-35740927)
chr3 (102-145)||(36990926-36990969)
chr3 (102-145)||(37016366-37016409)
chr3 (215-256)||(4204786-4204827)
chr3 (215-256)||(43572650-43572691)
chr3 (102-170)||(9267044-9267112)
chr3 (102-170)||(14171655-14171723)
chr3 (102-170)||(14262105-14262173)
chr3 (102-170)||(15328701-15328769)
chr3 (102-170)||(21633137-21633205)
chr3 (215-255)||(21633156-21633196)
chr3 (102-170)||(30500110-30500178)
chr3 (215-255)||(35995756-35995796)
chr3 (102-145)||(14162137-14162180)
chr3 (102-169)||(32998376-32998443)
chr3 (102-140)||(33372675-33372713)
chr3 (102-140)||(52552761-52552799)
chr3 (215-252)||(32998397-32998434)
chr3 (215-255)||(9267053-9267093)
chr3 (215-251)||(14262114-14262150)
chr3 (4-32)||(19112757-19112785)
chr3 (3-31)||(33372760-33372788)
chr3 (102-170)||(35741826-35741894)
[»] scaffold0361 (2 HSPs)
scaffold0361 (106-268)||(4636-4798)
scaffold0361 (102-170)||(4804-4872)
[»] chr6 (32 HSPs)
chr6 (102-268)||(24732007-24732173)
chr6 (102-268)||(30618031-30618196)
chr6 (103-268)||(2299453-2299617)
chr6 (102-268)||(9481251-9481417)
chr6 (102-258)||(3230016-3230171)
chr6 (116-268)||(30459044-30459196)
chr6 (110-268)||(10321873-10322032)
chr6 (102-220)||(33637628-33637746)
chr6 (180-268)||(26385421-26385509)
chr6 (164-268)||(33714630-33714734)
chr6 (117-251)||(18500506-18500641)
chr6 (102-220)||(32017696-32017813)
chr6 (174-251)||(17142798-17142875)
chr6 (102-268)||(14681025-14681191)
chr6 (206-268)||(18500457-18500520)
chr6 (102-170)||(14680951-14681019)
chr6 (102-162)||(19284198-19284258)
chr6 (216-268)||(32017679-32017731)
chr6 (102-170)||(9854128-9854196)
chr6 (102-170)||(24732179-24732247)
chr6 (102-170)||(26385347-26385415)
chr6 (102-170)||(30618202-30618270)
chr6 (215-262)||(33637709-33637757)
chr6 (102-170)||(18500383-18500451)
chr6 (102-170)||(30458970-30459038)
chr6 (102-170)||(33714556-33714624)
chr6 (102-145)||(9481448-9481491)
chr6 (1-31)||(18500683-18500713)
chr6 (116-170)||(32017619-32017673)
chr6 (215-252)||(19284207-19284244)
chr6 (215-255)||(18500392-18500432)
chr6 (215-255)||(33637788-33637828)
[»] scaffold0185 (1 HSPs)
scaffold0185 (116-269)||(4011-4164)
[»] scaffold0141 (3 HSPs)
scaffold0141 (125-268)||(8415-8557)
scaffold0141 (102-170)||(8563-8631)
scaffold0141 (215-255)||(8582-8622)
[»] scaffold0881 (1 HSPs)
scaffold0881 (117-268)||(363-513)
[»] scaffold0176 (1 HSPs)
scaffold0176 (104-236)||(15808-15939)
[»] scaffold0449 (2 HSPs)
scaffold0449 (102-220)||(7390-7508)
scaffold0449 (220-268)||(7373-7422)
[»] scaffold0117 (1 HSPs)
scaffold0117 (102-170)||(12223-12291)
[»] scaffold0166 (1 HSPs)
scaffold0166 (26-82)||(34144-34200)
[»] scaffold0477 (4 HSPs)
scaffold0477 (102-170)||(4989-5057)
scaffold0477 (210-268)||(4924-4983)
scaffold0477 (183-220)||(4929-4966)
scaffold0477 (215-255)||(5008-5048)
[»] scaffold0352 (2 HSPs)
scaffold0352 (215-251)||(4745-4781)
scaffold0352 (215-252)||(5941-5978)


Alignment Details
Target: chr2 (Bit Score: 134; Significance: 9e-70; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 103 - 268
Target Start/End: Original strand, 23806022 - 23806187
Alignment:
Q  103 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattc 202  Q
    ||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  23806022 tagattttgcccctgtaattttagattcttccacttttggtccctcctttcatcacgtcagcagaatccgcataaattacgtccctgtaatttcagattc 23806121  T
Q  203 ctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  23806122 ctcccacttttggtccctataatttcagattcctccacttttggtccctcattttacgtgccatgt 23806187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 23854975 - 23854809
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||  |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  23854975 ttagattttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 23854876  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  23854875 cctcccacttttgatccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 23854809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 26560863 - 26560697
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||||| |||||| | |||||||||||||| |||  ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  26560863 ttagattttgtccatataatttcatattcttccacttttggtctctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 26560764  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  26560763 cctcccacttttgatccctgtaatttcaaattcctccacttttgatccctcattttacgtgccatgt 26560697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 104 - 268
Target Start/End: Complemental strand, 22263498 - 22263334
Alignment:
Q  104 agattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcc 203  Q
    ||||||||||| |||||||| | |||||||||||||| |||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||    
T  22263498 agattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcataatctgcataaattacgtccctgtaatttcagattcc 22263399  T
Q  204 tcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||| | |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  22263398 tcctagttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 22263334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 15106136 - 15106302
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| ||||||||||||||||||  ||||  ||| ||||| |||| |||||||||| |||    
T  15106136 ttagattttgtccctgtaattttagattattccacttttggtccctcctttcatcacgtcagctaaatctgcatcaattaagtccttgtaatttcagatt 15106235  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  15106236 cctcccacttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgt 15106302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 116 - 262
Target Start/End: Original strand, 39878185 - 39878331
Alignment:
Q  116 tgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttgg 215  Q
    |||||||| |||||||||||||||| |||  ||||||||||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||    
T  39878185 tgtaatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccctgtaatttcatattcctcccacttttgg 39878284  T
Q  216 tccctgtaatttcagattccttcacttttggtccctcattttacgtg 262  Q
    ||||| |||||||||||| || |||||||||||||||||||||||||    
T  39878285 tccctctaatttcagattactccacttttggtccctcattttacgtg 39878331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 42671028 - 42670862
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||| ||||| |||||||| | ||| |||||||||| |||| ||||||||||||||||||||||||  |||||||||||| |||||||||||| |||    
T  42671028 ttagattatgtccctgtaatttcatatttttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgttcctgtaatttcagatt 42670929  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| | |||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||    
T  42670928 cctcctagttttggtccctgtaatttcaaattcctccatttttggtccctcattttacgtgccatgt 42670862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 17463160 - 17463326
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| || |||| |||||||| |||| || |||||||| |||| |||||||  ||||||||||||||||||||||||| |||    
T  17463160 ttagattttgtccctgtaatttcaggttctcccacttttggtccctcatttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagatt 17463259  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||||||||||| ||||||||  | ||||||||||||||||||| ||||||||    
T  17463260 cctcccacttttggtccctgtaattttagattcctctaattttggtccctcattttacatgccatgt 17463326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 17850895 - 17850729
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| || |||||||||||||||| ||||  ||| |||||||||| |||||||||| |||    
T  17850895 ttagattttgtccctgtaatttcagattcttccacttttggtccctcttttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagatt 17850796  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||| || ||||||    
T  17850795 cctcccacttttggttcctttaatttcagattcctccacttttgatccctcattttaggtaccatgt 17850729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 26135886 - 26136052
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||| |||| |||||||  |||||||||||||| |||||||||| |||    
T  26135886 ttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagatt 26135985  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||| |||||||||||| |||||||| |||||||| |||||||||||||| ||||||||| ||||||    
T  26135986 cctctcacttttggtccttgtaattttagattcctccacttttggtcccttattttacgtaccatgt 26136052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 19251539 - 19251705
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |||||||||||| ||||||||||   ||||||||| || | |||||||||| |||    
T  19251539 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacatcagcagaatatacataaattatgttcttgtaatttcaaatt 19251638  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| ||||||| |||||||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  19251639 cctccaacttttgatccctgtaatttcatattcctccacttttggtccatcattttacgtgccatgt 19251705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 103 - 268
Target Start/End: Complemental strand, 13284716 - 13284551
Alignment:
Q  103 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattc 202  Q
    |||||||||||| |||||||| |||||| ||||||||| |||| || ||| | ||||||| |||||||  |||||||||||||| |||||||| | ||||    
T  13284716 tagattttgtccttgtaatttcagattcctccacttttggtccctcatttaaccacgtcaacagaatctacataaattacgtccttgtaatttaagattc 13284617  T
Q  203 ctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||||    
T  13284616 ctcccacttttggtccctgtaatttcatatttcttcacttttggtccctcatttcacgtgtcatgt 13284551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 20498815 - 20498980
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||| ||||| |||| ||| |||||||||||||||| |||| |||||| |||||||||| ||||||  |||||||||||||  | ||||||||||||    
T  20498815 ttagattatgtccctgta-tttcagattcttccacttttggtccctccttttatcacgtcagtagaatctgcataaattacgtcaatataatttcatatt 20498913  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||||||||||||||||  || |||||||| ||||||||||||||||| ||||    
T  20498914 cctcccacttttggtccctgtaatttcagatcactccacttttgatccctcattttacgtgctatgt 20498980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 33290118 - 33290272
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||| ||||| |||||||| | | || ||||||||| |||| |  ||| | |||||||||||||||  |||||||| |||||||||||||||| |||    
T  33290118 ttagattctgtccttgtaatttcatactcctccacttttggtcccttatttaaccacgtcagcagaatctgcataaatttcgtccctgtaatttcagatt 33290217  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  33290218 cctcccccttttggtccctgtaatttcagatacctccacttttggtccctcattt 33290272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 26236200 - 26236313
Alignment:
Q  106 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctc 205  Q
    ||||||||| |||||||| |||||||| ||||||| |||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||     
T  26236200 attttgtccctgtaatttcagattctttcacttttggtccctcctttcatcacgtcagcagaatttgcataaattacgtccctgtaatttcatattcct- 26236298  T
Q  206 ccacttttggtccct 220  Q
    |||||||||||||||    
T  26236299 ccacttttggtccct 26236313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 26236277 - 26236330
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  26236277 gtccctgtaatttcatattcctccacttttggtccctcattttacgtgccatgt 26236330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 30390655 - 30390602
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  30390655 gtccctgtaatttcagattccttcatttttggtccctcattttacgtgctatgt 30390602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 20499054 - 20498986
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||| ||||||| ||||||| ||||| ||| |||||||||||    
T  20499054 ttagattttgtccctgtaatttcagattctttcacttttggtccttcatttcaccacatcagcagaatc 20498986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 13254566 - 13254626
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtca 162  Q
    ||||||||||||| |||||||| |||||||| ||||||| || | ||||||||||||||||    
T  13254566 ttagattttgtccttgtaatttcagattctttcacttttggttcctcctttcatcacgtca 13254626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 34548642 - 34548710
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||||||||||||||||| | ||| |||||| ||| |||  ||||||||||||||||| ||||||    
T  34548642 ttagattttgtccatgtaatttcatattgttccacctttggtcactcctttcatcacgtcagtagaatc 34548710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 21482189 - 21482146
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtcc 145  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  21482189 ttagattttgtccctgtcattttagattcttccacttttagtcc 21482146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 39878407 - 39878361
Alignment:
Q  210 ttttggtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||    
T  39878407 ttttcgtccctgtaatttcagattttttcacttttggtccctcattt 39878361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 20499045 - 20499004
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  20499045 gtccctgtaatttcagattctttcacttttggtccttcattt 20499004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 26236205 - 26236242
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctc 252  Q
    |||||||||||||||||||| |||||||||||||||||    
T  26236205 gtccctgtaatttcagattctttcacttttggtccctc 26236242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 15106376 - 15106308
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| ||||||||||||||||  ||| || || || |||||||||| ||||    
T  15106376 ttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcaaaatc 15106308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 17850655 - 17850723
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||  |||||||| ||||||||||||||||  ||| || || || |||||||||||||||    
T  17850655 ttagattttgtctctgtaatttaagattcttccacttttgatccctcattccaccacgtcagcagaatc 17850723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 19251779 - 19251711
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||||| |||||||| | |||||||||||||  |||| || ||||| |||||||||||||||    
T  19251779 ttagattctgtccttgtaatttcatattcttccactttcggtccctcatttcaccacgtcagcagaatc 19251711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 22263260 - 22263328
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |  || || |||||||||||||||    
T  22263260 ttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatc 22263328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 26236404 - 26236336
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| ||||||||||| |||| |||| || || || ||||| |||||||||    
T  26236404 ttagattttgtccctgtaatttcagattcttccatttttggtccctcattccaccacgtaagcagaatc 26236336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 26560623 - 26560691
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||| |||| |||||||| |||||||||||||||| |||| |  || || |||||||||||||||    
T  26560623 ttagatttagtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatc 26560691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 23806261 - 23806198
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagca 165  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||||||||    
T  23806261 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagca 23806198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 13254733 - 13254695
Alignment:
Q  218 cctgtaatttcagattccttcacttttggtccctcattt 256  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  13254733 cctgtaatttcagattcttccacttttggtccctcattt 13254695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 23046776 - 23046822
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttc 148  Q
    ||||||| ||||| |||||||| ||||||||||||||| ||||||||    
T  23046776 ttagattctgtccctgtaatttcagattcttccactttgagtccttc 23046822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 44098931 - 44098885
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttc 148  Q
    ||||||| ||||| |||||||| ||||||||||||||| ||||||||    
T  44098931 ttagattatgtccctgtaatttcagattcttccactttgagtccttc 44098885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 13284484 - 13284545
Alignment:
Q  109 ttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||| |||||||| | ||||||||||||||||||| || ||||| |||| || |||||||    
T  13284484 ttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacgacaacagaatc 13284545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 12419032 - 12418964
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| |||||||| |||||  ||||| |||||||||||||| || ||| | || ||||||||||||    
T  12419032 ttagattctgtccatgaaatttccgattcctccacttttagtccctcatttaaccatgtcagcagaatc 12418964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 12431092 - 12431024
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| |||||||| |||||  ||||| |||||||||||||| || ||| | || ||||||||||||    
T  12431092 ttagattctgtccatgaaatttccgattcctccacttttagtccctcatttaaccatgtcagcagaatc 12431024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 15106367 - 15106327
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  15106367 gtccctgtaatttcagattcttccacttttgatccctcatt 15106327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 23806252 - 23806212
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  23806252 gtccctgtaatttcatattcttccacttttggtccctcatt 23806212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 26236395 - 26236355
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||| | || |||||||||||||||    
T  26236395 gtccctgtaatttcagattcttccatttttggtccctcatt 26236355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 26560632 - 26560668
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccct 251  Q
    |||||||||||||||||||| | ||||||||||||||    
T  26560632 gtccctgtaatttcagattcttccacttttggtccct 26560668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 30390528 - 30390596
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| |||| ||||    
T  30390528 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcaaaatc 30390596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 30390537 - 30390577
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  30390537 gtccctgtaatttcatattcttccacttttggtccctcatt 30390577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 5e-68; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 7126226 - 7126060
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  7126226 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcatatt 7126127  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  7126126 cctcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 7126060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 103 - 268
Target Start/End: Complemental strand, 24651007 - 24650843
Alignment:
Q  103 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattc 202  Q
    |||||||| ||| |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||     
T  24651007 tagattttatccctgtaattttagattcttccacttttgatccctcctttcatcacgtcagcagaatccgcataaattacatccctgtaatttcatattt 24650908  T
Q  203 ctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  24650907 ctcccac-tttggtccctgtaatttcagattcctccatttttggtccctcattttacgtgccatgt 24650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 20709521 - 20709355
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||   |||||||||| |||||||||||||| |||    
T  20709521 ttagattttgtccatgtaatttcatattcttccactttttgtccttcctttcatcacatcagcagaatatgcataaattacatccctgtaatttcagatt 20709422  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||||||||||||    
T  20709421 cctcccacttttgatccctgtaatttcatattcctccactttttgtccctcattttacgtgccatgt 20709355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 31799949 - 31799783
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    |||||||||||||||||||||| |||||||||| |||||  ||| |||||||||||||||||||||||   |||||||||||||||| |||||||| |||    
T  31799949 ttagattttgtccatgtaatttcagattcttcctcttttgatccctcctttcatcacgtcagcagaatttgcataaattacgtccctttaatttcagatt 31799850  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||    
T  31799849 cctcccacttttggtccctgtaatttcaaaatcctccacttttggtccctcattttacatgccatgt 31799783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 14143970 - 14144136
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| || | || |||||||||||||| ||||||  ||||||||||||||||||||||||| |||    
T  14143970 ttagattttgtccctgtaatttcatattcttccacttttggtacctcatttcatcacgtcagtagaatctgcataaattacgtccctgtaatttcagatt 14144069  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||| ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  14144070 ccttccacttttggtccatgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 14144136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 268
Target Start/End: Original strand, 17762355 - 17762517
Alignment:
Q  106 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctc 205  Q
    ||||||| | |||||||| |||||||||||||||| |||| |||||| ||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  17762355 attttgttcctgtaatttcagattcttccacttttggtccctcctttaatcacgtaagcagaatctgcataaattacgtccctgtaatttcatattcctc 17762454  T
Q  206 ccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    || ||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||||    
T  17762455 ccgcttttggtccctgtaattttagattcctccacttttggtccctcattttatgtcccatgt 17762517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 994055 - 993890
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||  |||||||||||||||| |||| |||||| |||| |||| |||||||   |||||||||||||||||||||||| |||    
T  994055 ttagattttgtccctgtaattgcagattcttccacttttggtccctccttttatcatgtcaacagaatctgtataaattacgtccctgtaatttcagatt 993956  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| |||||    
T  993955 cctcccacttttggtccctgtaa-ttcatattcctccacttttggtccctcattttacgtgtcatgt 993890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 4919299 - 4919133
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||| ||||||  ||| ||||||||||| |||| ||||||   |||||||||||||| ||||||||||||||    
T  4919299 ttagattttgtccctgtaatttcagattcttctacttttgatccctcctttcatcaagtcaacagaatatgcataaattacgtccttgtaatttcatatt 4919200  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| |||||||||| ||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  4919199 cctccaacttttggtcactgtaatttcaaattcctccacttttggtccctcattttacgtaccatgt 4919133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 24837478 - 24837312
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | ||||||| ||||||  ||| ||||||||||| |||| |||||||  |||||||||||||| |||||||||| |||    
T  24837478 ttagattttgtccctgtaatttcaaattcttctacttttgctccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagatt 24837379  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  24837378 cctctcacttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtaccatgt 24837312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 29444875 - 29445041
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||| ||||| |||||||| | ||||||| |||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  29444875 ttagattatgtccttgtaatttcatattcttctacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 29444974  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| | |||||||||||||||||||| |||||| || |||| ||||||||||||||||| |||||    
T  29444975 cctcctagttttggtccctgtaatttcaaattcctacattttttgtccctcattttacgtgtcatgt 29445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 41001662 - 41001496
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| | |||||| |||||||||||||||| |||| ||||||||||| |||| ||||| |  ||||||||| ||| |||||||||||| ||    
T  41001662 ttagattttgtccctataatttcagattcttccacttttggtccctcctttcatcaagtcaacagaacctacataaattatgtcactgtaatttcatctt 41001563  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||| |||||||||||||||||||||||| || |||| |||||||||||||||||||||||    
T  41001562 cctcccacttctggtccctgtaatttcagattcctccatttttagtccctcattttacgtgccatgt 41001496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 6817430 - 6817265
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||  |||||||||||| ||||||||||   ||||||||||||||||||||||||| |||    
T  6817430 ttagattttgtccctgtaatttcatattcttccacttttggtcactcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcaaatt 6817331  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||| |  |||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  6817330 cctcccacttttgat-tctgtaatttcagattcctccatttttggtcccttattttacgtgccatgt 6817265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 102 - 266
Target Start/End: Original strand, 24074372 - 24074535
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||  |||||||| | |||||||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||  |||||||| |||    
T  24074372 ttagattttgtctctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccccataatttcagatt 24074471  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccat 266  Q
    | ||||||||||| | |||||||||||| ||| || |||||||||||||||||||||||||||||    
T  24074472 catcccacttttgat-cctgtaatttcaaatttctccacttttggtccctcattttacgtgccat 24074535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 14411770 - 14411884
Alignment:
Q  106 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctc 205  Q
    |||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||    
T  14411770 attttgtctatgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcagaatttgcataaattacgtccctgtaatttcagattcctc 14411869  T
Q  206 ccacttttggtccct 220  Q
    |||||||||||||||    
T  14411870 ccacttttggtccct 14411884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 27159266 - 27159148
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||||| ||||||||| |||| |||| | ||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  27159266 ttagattttgtccctgtaattttatattcttccatttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 27159167  T
Q  202 cctcccacttttggtccct 220  Q
    ||||||||||||| |||||    
T  27159166 cctcccacttttgatccct 27159148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 18336537 - 18336691
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||| |||||  ||| |||||||||||| ||||||||||   ||||||||||||||||||||||||| |||    
T  18336537 ttagattttgtccctgtaatttcagattcttccgcttttgatccctcctttcatcacatcagcagaatttgcataaattacgtccctgtaatttcagatt 18336636  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |            |||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  18336637 c------------gtccctgtaatttcagattcctccacttttggtccctcattttacgtgacatgt 18336691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 24651057 - 24651134
Alignment:
Q  5 gacgaaaagaggtatttaccctattttcttttgtactaactattggtagtttgtagcacagcacaacttcacaatttc 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||    
T  24651057 gacgaaaagaggtatttaccctattttcttttgtactaactattgatagtttggagcccagcacagcttcacaatttc 24651134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 172 - 268
Target Start/End: Original strand, 23979041 - 23979136
Alignment:
Q  172 ccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||| || ||| |||||| |||||||||||||| |||||    
T  23979041 ccataaattacgtccttgtaatttcatatttctcccacttttggtccctttaatttcagattactccacgtttggt-cctcattttacgtgtcatgt 23979136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 22571386 - 22571227
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||| |||||||||| | |||||||   ||||  ||| || ||||| ||||||| || ||||  |||||||||||||||||||||||||  ||    
T  22571386 ttagattttgttcatgtaatttcaaattcttctcgttttgctccctcatttcaccacgtcaacaaaatctgcataaattacgtccctgtaatttcaggtt 22571287  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgt 261  Q
    ||||| || |||||||||| |||||||| |||| | | ||||||||||||||||| ||||    
T  22571286 cctcctacatttggtccctctaatttcatattcatccgcttttggtccctcatttcacgt 22571227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 24791761 - 24791817
Alignment:
Q  26 tattttcttttgtactaactattggtagtttgtagcacagcacaacttcacaatttc 82  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  24791761 tattttcttttgtagtaactattggtagtttgtagcacagcacaacttcacactttc 24791817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 6817191 - 6817259
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| |||||||||||||| |||||||||||||||| |||| || ||||| |||||||||||||||    
T  6817191 ttagattatgtccatgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatc 6817259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 23979210 - 23979142
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || ||||| |||||||||||||||    
T  23979210 ttagattttgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatc 23979142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 14411847 - 14411901
Alignment:
Q  215 gtccctgtaatttcagattccttc-acttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| |||||    
T  14411847 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgtcatgt 14411901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 20709281 - 20709349
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||||| |||||||| | |||||||||||||| |||| || ||||| |||||||||||||||    
T  20709281 ttagattctgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatc 20709349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 27159185 - 27159135
Alignment:
Q  215 gtccctgtaatttcagattccttc-acttttggtccctcattttacgtgcc 264  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  27159185 gtccctgtaatttcagattcctcccacttttgatccctcattttacgtgcc 27159135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 7125986 - 7126054
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| | |||||| |||||||||||||||| |||| |  || || |||||||||||||||    
T  7125986 ttagattttgtccctataatttcagattcttccacttttggtcccttattccaccacgtcagcagaatc 7126054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 14411975 - 14411907
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||| ||| |||| || || || ||||| |||||||||    
T  14411975 ttagattttgtccttgtaatttcagattcttccacgtttggtccctcattccaccacgtaagcagaatc 14411907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 24074611 - 24074543
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |  ||| | |||||||||||||||    
T  24074611 ttagattttgtccttgtaatttcatattcttccacttttggtcccttatttaaccacgtcagcagaatc 24074543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 24837238 - 24837306
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| |||||||||    
T  24837238 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatc 24837306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 30512361 - 30512405
Alignment:
Q  211 tttggtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  30512361 tttggtccctgtaatttcagatttttccacttttggtccctcatt 30512405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 30552701 - 30552745
Alignment:
Q  211 tttggtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  30552701 tttggtccctgtaatttcagatttttccacttttggtccctcatt 30552745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 41001422 - 41001490
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| ||||||| || || || || |||||||||    
T  41001422 ttagattttgtccctgtaatttcatattcttccacttttggtccttcattccaccatgtaagcagaatc 41001490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 4919059 - 4919126
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaat 169  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| ||||||||    
T  4919059 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaat 4919126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 29445115 - 29445072
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtcc 145  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||    
T  29445115 ttagattttgtccttgtaatttcagattcttccacttttggtcc 29445072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 31799709 - 31799752
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtcc 145  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||    
T  31799709 ttagattttgtccctgtaatttcagattcttccacttttggtcc 31799752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 18336765 - 18336727
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccactttt 140  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  18336765 ttagattttgtccctgtaatttcagattcttccactttt 18336727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 6817200 - 6817241
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    |||| ||||||||||||||| | |||||||||||||||||||    
T  6817200 gtccatgtaatttcagattcttccacttttggtccctcattt 6817241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 20709290 - 20709331
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    ||||||||||||||| |||| | |||||||||||||||||||    
T  20709290 gtccctgtaatttcaaattcttccacttttggtccctcattt 20709331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 20947097 - 20947056
Alignment:
Q  220 tgtaatttcagattccttcacttttggtccctcattttacgt 261  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||    
T  20947097 tgtaatttcagattcctccacttttggtcactcatttcacgt 20947056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 23979201 - 23979160
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    ||||||||||||||| |||| | |||||||||||||||||||    
T  23979201 gtccctgtaatttcaaattcttccacttttggtccctcattt 23979160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 993816 - 993884
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||| |||| |||||||| | |||||||||||||| |||| || || || ||||| |||||||||    
T  993816 ttagatttagtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatc 993884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 4919068 - 4919108
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  4919068 gtccctgtaatttcatattcttccacttttggtccctcatt 4919108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 14144210 - 14144142
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |  || || ||||||| |||||||    
T  14144210 ttagattttgtccctgtaatttcaaattcttccacttttggtcccttattccaccacgtcaccagaatc 14144142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 27159063 - 27159127
Alignment:
Q  106 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||| |||||||| |||||||||||||||| |||| |  || || |||||||||| ||||    
T  27159063 attttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatc 27159127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 27159068 - 27159104
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccct 251  Q
    |||||||||||||||||||| | ||||||||||||||    
T  27159068 gtccctgtaatttcagattcttccacttttggtccct 27159104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 31799718 - 31799754
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccct 251  Q
    |||||||||||||||||||| | ||||||||||||||    
T  31799718 gtccctgtaatttcagattcttccacttttggtccct 31799754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 41424585 - 41424653
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||||| ||| |||| ||||||||||||||||||||| || ||| | || ||||||| ||||    
T  41424585 ttagattctgtccctgtcatttcagattcttccacttttagtccctcatttaaacatgtcagcaaaatc 41424653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 17623196 - 17623030
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||  ||||||||||||||||||||||||  ||||||||| ||||||||||||||| |||    
T  17623196 ttagattttgtccttgtaatttcaaattcttccacttttggtcactcctttcatcacgtcagcagaatctgcataaattatgtccctgtaatttcaaatt 17623097  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17623096 cctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgt 17623030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 10108439 - 10108605
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| ||||||||||||||||||||||||  |||||||||||||| |||||||||| |||    
T  10108439 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagatt 10108538  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    | |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  10108539 cgtcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 10108605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 30789816 - 30789650
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| || |||||||||||||||| ||||  ||| |||||||||| ||||||||||||||    
T  30789816 ttagattttgtccctgtaatttcagattcttccacttttggtccatcgtttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcatatt 30789717  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||    
T  30789716 cctcccacttttggtccttgtaatttcagattcctccacttttgatccctcatcttacgtgccatgt 30789650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 21148245 - 21148086
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||    
T  21148245 ttagattttgtccttgtaatttcatattcttccacttttagtccctcctttcatcatgtcagcagaatctgcataaattacgtccctgtaatttcagatt 21148146  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtg 262  Q
    ||||||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||    
T  21148145 cctcccacttttggt-cctataatttcaaattcctccacttttggtccctcattttacgtg 21148086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 2583389 - 2583555
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| ||||||||  |||||||| ||||||  ||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  2583389 ttagattttgtccctgtaatttcggattcttctacttttgatccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 2583488  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||||    
T  2583489 cctcctacttttggtccctgtaatttcaaattcctccacttttagtccctcattttacatgccatgt 2583555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 102 - 267
Target Start/End: Original strand, 42605822 - 42605987
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||| ||| |||||||| | |||||||||||||| |||| |||||| |||||||||| |||||   ||||||||||||||||||||||||| |||    
T  42605822 ttagattttatccctgtaatttcatattcttccacttttggtccctcctttaatcacgtcagtagaatatgcataaattacgtccctgtaatttcaaatt 42605921  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatg 267  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42605922 cctcccgcttttggtcgctgtaatttcagattcctccacttttggtccctcattttacgtgccatg 42605987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 104 - 266
Target Start/End: Original strand, 5554940 - 5555102
Alignment:
Q  104 agattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcc 203  Q
    ||||||||||| | |||||| | |||||||||||||| |||| | ||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||    
T  5554940 agattttgtccctataatttcatattcttccacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctggaatttcagattcc 5555039  T
Q  204 tcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccat 266  Q
    ||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  5555040 tcctagttttggtccctgtaatttcgaattccttcacttttggtccctcattttacgtgccat 5555102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 14767816 - 14767656
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | ||||||||| |||  |||| || ||||||||||||| |||||||  ||||||||||||||||||||||||| |||    
T  14767816 ttagattttgtccctgtaatttcatattcttccagtttgtgtccctcttttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagatt 14767717  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtg 262  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  14767716 cctcccacttttggtccctgtaatttcaaattcctccacttttggtctctcattttacgtg 14767656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 22494454 - 22494619
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||| | |||||||| | ||||||||| |||| ||||||| ||| |||||||||||||||||  ||||||||||||||||||||||| | |||    
T  22494454 ttagattttgttcctgtaatttcatattcttccatttttggtccttc-tttaatcacgtcagcagaatctgcataaattacgtccctgtaattttagatt 22494552  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  22494553 cctcctacttttggtcccagtaatttcagattcctccacttttggtccctcattttacgtgtcatgt 22494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 26136754 - 26136920
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||||| ||||  | | ||||||||||| ||||||| ||||  ||||||||||||||||||||||||| |||    
T  26136754 ttagattttgtccttgtaatttcagattcttccaattttgattcctcctttcatcaagtcagcataatctgcataaattacgtccctgtaatttcagatt 26136853  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
     |||||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||    
T  26136854 tctcccacttttggtccttgtactttcagattcctccatttttggtccctcattttacgtgccatgt 26136920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 268
Target Start/End: Original strand, 7689598 - 7689758
Alignment:
Q  108 tttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctccc 207  Q
    ||||||| |||||||| |||||||||||||||| |||| || ||||||||| || ||| ||||  ||| |||||||||| |||||||||| |||||||||    
T  7689598 tttgtccttgtaatttcagattcttccacttttggtccctcttttcatcacatcggcaaaatctgcatcaattacgtccttgtaatttcagattcctccc 7689697  T
Q  208 acttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  7689698 acttttagtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgt 7689758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 107 - 268
Target Start/End: Complemental strand, 43851968 - 43851807
Alignment:
Q  107 ttttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcc 206  Q
    |||||||  |||||||  |||||||||||||||| |||| ||||||||||||||||||| |||   ||| |||||||||| |||||||||| ||||||||    
T  43851968 ttttgtctctgtaattcaagattcttccactttttgtccctcctttcatcacgtcagcaaaatttgcatcaattacgtccttgtaatttcagattcctcc 43851869  T
Q  207 cacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||| |||||| |||||||| |||||||||||||||| |||||    
T  43851868 cacttttggtccctgtaatttcatattcctccacttttgatccctcattttacgtgtcatgt 43851807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 260
Target Start/End: Original strand, 14820363 - 14820521
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |||||||||||| |||||||||||  ||||||||||||||||||||||||| |||    
T  14820363 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacatcagcagaatctgcataaattacgtccctgtaatttcagatt 14820462  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacg 260  Q
     |||| | ||||| |||| ||||| ||| ||||||  ||||||||||||||||||||||    
T  14820463 tctcctagttttgctccccgtaatctcaaattcctctacttttggtccctcattttacg 14820521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 42113293 - 42113127
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||| ||||| | |||||| | ||||||||||||||  ||| ||||||||||| ||||||| | ||  ||||||||| |||||||||||||||||||    
T  42113293 ttagattatgtccctttaatttcaaattcttccacttttgatccctcctttcatcatgtcagcaaattctgcataaattatgtccctgtaatttcatatt 42113194  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||| |||||||| ||| || ||||||||||||||||||||| ||| |||||    
T  42113193 cctcccacttttggtccctataatttcatattactccacttttggtccctcattttatgtgtcatgt 42113127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 106 - 268
Target Start/End: Complemental strand, 43481619 - 43481457
Alignment:
Q  106 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctc 205  Q
    ||||||||| |||||||| | ||||||||||| || ||| ||||||| |||||||||||| ||||  |||||||||||||| |||||||||| |||||||    
T  43481619 attttgtccctgtaatttcaaattcttccactcttggtctttcctttaatcacgtcagcacaatctgcataaattacgtccttgtaatttcagattcctc 43481520  T
Q  206 ccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |  || ||||||  |||||||| |||||||| |||||||| |||||| |||||||||||||||    
T  43481519 ctgctcttggtctttgtaattttagattcctccacttttgatccctcgttttacgtgccatgt 43481457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 268
Target Start/End: Complemental strand, 26533020 - 26532926
Alignment:
Q  174 ataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||| ||| |||||||||| | ||||| |||||||||| ||| ||||||||||||||| |||||||  |||||||||||||||| |||||    
T  26533020 ataaattacatccttgtaatttcaaactcctcacacttttggttcctataatttcagattcctccacttttaatccctcattttacgtgtcatgt 26532926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 195
Target Start/End: Complemental strand, 21144814 - 21144721
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaattt 195  Q
    ||||||||||||| |||||||| |||||| |||| |||| |||| |  ||| | |||||||||||||||  |||||||||||||||||||||||    
T  21144814 ttagattttgtccttgtaatttcagattcctccatttttcgtcccttatttaaccacgtcagcagaatctgcataaattacgtccctgtaattt 21144721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 10171452 - 10171384
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||| || || ||||| ||||||||||||    
T  10171452 ttagattttgtccctgtaattttagattctttcacttttggtccctcattccatcatgtcagcagaatc 10171384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 17622957 - 17623024
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||| | ||||||||||||||||||||||||| |||| || || || |||||||||||||||    
T  17622957 ttagattttgttc-tgtaattttagattcttccacttttggtccctcattccaccacgtcagcagaatc 17623024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 21148006 - 21148074
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |  || || |||||||||||||||    
T  21148006 ttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatc 21148074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 26136994 - 26136926
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| || || || ||||| |||||||||    
T  26136994 ttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatc 26136926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 42113053 - 42113121
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||||| |||||||| |||||||| ||||||| |||| || ||||| |||||||||||||||    
T  42113053 ttagattatgtccctgtaatttaagattctttcacttttggtccctcatttcaccacgtcagcagaatc 42113121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 42113062 - 42113103
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  42113062 gtccctgtaatttaagattctttcacttttggtccctcattt 42113103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 7689828 - 7689764
Alignment:
Q  106 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||| |||||||| ||||||||||||||||  ||| || || || |||||||||||||||    
T  7689828 attttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcagaatc 7689764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 10108679 - 10108611
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |  || || |||||||||||||||    
T  10108679 ttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatc 10108611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 10171443 - 10171403
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  10171443 gtccctgtaattttagattctttcacttttggtccctcatt 10171403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 14767576 - 14767644
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| ||||| |||||||||| |||| |  || || |||||||||||||||    
T  14767576 ttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatc 14767644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 14820603 - 14820535
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |  || || |||||||||||||||    
T  14820603 ttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatc 14820535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 26136985 - 26136945
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  26136985 gtccctgtaatttcagattcttccacttttggtccctcatt 26136945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 43851733 - 43851801
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| ||||||||||||||||  ||| || || || ||| |||||||||||    
T  43851733 ttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacatcagcagaatc 43851801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 40486697 - 40486740
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtcc 145  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||    
T  40486697 ttagattctgtccttgtaattttagattattccacttttagtcc 40486740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 245
Target Start/End: Complemental strand, 35368714 - 35368684
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttg 245  Q
    |||||||||||||||||||||||||||||||    
T  35368714 gtccctgtaatttcagattccttcacttttg 35368684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 40487706 - 40487656
Alignment:
Q  120 attttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||||||||||||||||||||||||  || | ||| |||||||||||    
T  40487706 attttagattcttccacttttagtccttcaattgaacacatcagcagaatc 40487656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 22848540 - 22848464
Alignment:
Q  189 gtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccat 266  Q
    |||||||||||||| |  ||||||||||| ||||||||||| |||||| || ||||  | |||||||| |||||||||    
T  22848540 gtaatttcatattcttttcacttttggtctctgtaatttcaaattcctccattttttat-cctcatttcacgtgccat 22848464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 30789589 - 30789626
Alignment:
Q  219 ctgtaatttcagattccttcacttttggtccctcattt 256  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  30789589 ctgtaatttcagattcctccacttttgatccctcattt 30789626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 38726756 - 38726793
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttt 139  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  38726756 ttagattttgtccttgtaatttcagattcttccacttt 38726793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 7689823 - 7689783
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  7689823 gtccctgtaatttcagattcttccacttttgatccctcatt 7689783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 21148015 - 21148051
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccct 251  Q
    |||||||||||||||||||| | ||||||||||||||    
T  21148015 gtccctgtaatttcagattcttccacttttggtccct 21148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 22494684 - 22494644
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  22494684 gtccctgtaatttcaaattcttccacttttggtccctcatt 22494644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 26532852 - 26532920
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | ||| ||||||||||  ||| || || || |||||||||||||||    
T  26532852 ttagattttgtccctgtaatttcaaatttttccacttttgatccctcattccaccacgtcagcagaatc 26532920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 43851742 - 43851782
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  43851742 gtccctgtaatttcagattcttccacttttgatccctcatt 43851782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 119; Significance: 8e-61; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 1479 - 1645
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||| ||||| |||||||| |||||||||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||| |||||||| |||    
T  1479 ttagattatgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcagaatctacataaattacgtccctataatttcagatt 1578  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||    
T  1579 cctcccacttttggtccttgtaatttcagattactccacttttggtccctcattttacgtgccatgt 1645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 1719 - 1651
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||||| |||||||| |||||||||||||||| |||| ||   ||| ||| |||||||||||    
T  1719 ttagattatgtccttgtaatttcagattcttccacttttggtccctcacatcaccacatcagcagaatc 1651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 8e-61; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 41600267 - 41600101
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||  ||| |||||||||| |||||||||| |||    
T  41600267 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagatt 41600168  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  41600167 cctcccacttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgt 41600101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 12006849 - 12006683
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||  ||| |||||||||| |||||||||| |||    
T  12006849 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagatt 12006750  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  12006749 cctcccacttttggtcactgtaatttcagattcctccacttttgatccctcattttacgtgccatgt 12006683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 106 - 268
Target Start/End: Original strand, 23704734 - 23704896
Alignment:
Q  106 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctc 205  Q
    ||||||||| |||||||| |||||||||||||||| |||| ||||||||||| ||||  ||||||  |||||||||| |||||||||||||| |||||||    
T  23704734 attttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaatagaatctgcataaattacttccctgtaatttcagattcctc 23704833  T
Q  206 ccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23704834 ccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgt 23704896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 20419845 - 20419679
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||| |||| || ||||  |||||||||||||| |||||||||| |||    
T  20419845 ttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaacaaaatcttcataaattacgtccttgtaatttcagatt 20419746  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  20419745 cctcccacttttggtccctgtaatttcatattcctccacttttggtccctcattttacgtaccatgt 20419679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 20459000 - 20458834
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||  |||||||| |||||||||||||||| |||| |||||| |||| |||| ||||||   ||||||||||||||||||||||||| |||    
T  20459000 ttagattttgtcactgtaatttcagattcttccacttttggtccctcctttgatcaagtcaacagaatttgcataaattacgtccctgtaatttcagatt 20458901  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20458900 cctcccgcttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtgccatgt 20458834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 38880033 - 38879867
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |||||||| || |||| |||||||  |||||||||||||||||||||||||||||    
T  38880033 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcaccaagtcaacagaatctgcataaattacgtccctgtaatttcatatt 38879934  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||| || ||||||||||||||| ||  ||||||||||||||||| |||||||||    
T  38879933 cctcccacttttggtctctataatttcagattcctccaaatttggtccctcattttatgtgccatgt 38879867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 102 - 254
Target Start/End: Complemental strand, 28218472 - 28218320
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |||||||||||||||| || ||||  ||| ||||||||||||||||||||| |||    
T  28218472 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaaaatctgcatcaattacgtccctgtaatttcagatt 28218373  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcat 254  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  28218372 cctcccacttttggtccctgtaatttcagattactccacttttggtccctcat 28218320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 20963803 - 20963638
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    |||||||| |||| |||||||| |||||||| ||||||| ||||| ||||||||||||||| || |||   |||||||||||||||||||||||||||||    
T  20963803 ttagatttagtccctgtaatttcagattctttcacttttggtcct-cctttcatcacgtcaacataatttgcataaattacgtccctgtaatttcatatt 20963705  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||||    
T  20963704 cctcccacttttggtccttgtaatttcatattcttccacttttggtccctcattttacgtgccatgt 20963638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 48672588 - 48672422
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||| ||| |||||||| |||||||||||||||| |||| |||||||||||||| |||| ||||  ||| |||||||||| |||||||||| |||    
T  48672588 ttagattttatccctgtaatttcagattcttccacttttggtccctcctttcatcacgttagcaaaatctgcatcaattacgtccttgtaatttcaaatt 48672489  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  48672488 cctcccacttttggtccttgtaatttcagattcctccacttttgatccctcattttacatgccatgt 48672422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 10409443 - 10409609
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||| | |||||||||| |||||| ||||  ||| |||||||||| |||||||||| |||    
T  10409443 ttagattttgtccttgtaatttcagattcttctacttttagtcccttctttcatcacttcagcaaaatctgcatcaattacgtccttgtaatttcagatt 10409542  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  10409543 cctcctacttttggtccttgtaatttcagattcctccacttttgatccctcattttacatgccatgt 10409609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 23383809 - 23383643
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||| ||| |||| ||||||||||| |||| |||||||  |||||| ||||||| |||||||| | |||    
T  23383809 ttagattttgtccctgtaatttcatattcttccacctttggtccctcctttcatcaagtcaacagaatctgcataaactacgtccttgtaattttagatt 23383710  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  23383709 cctcccacttttggtccttgtaatttcaaattccttcacttttggtccctcattttacgtgtcatgt 23383643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 31851548 - 31851382
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||  |||||||||||| ||||||||||   ||||||||||||||||||||||||| |||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcagatt 31851449  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||| || ||||| |||||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  31851448 cctctcaattttgatccctgtaatttcatatttctccacttttggtccctcattttacgtgccatgt 31851382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 104 - 267
Target Start/End: Complemental strand, 7658276 - 7658114
Alignment:
Q  104 agattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcc 203  Q
    ||||||||||| |||||||| |||||||||||||||| |||  ||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||    
T  7658276 agattttgtccctgtaatttaagattcttccacttttggtctctcctttcatcacgtcagcaaaatctgcataaattatgtccctgtaatttcatattcc 7658177  T
Q  204 tcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatg 267  Q
    ||||||||||||| ||| ||||||||||||| |  |||||| ||||||||||||||||| ||||    
T  7658176 tcccacttttggt-cctttaatttcagattcatctacttttagtccctcattttacgtgacatg 7658114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 6465923 - 6466077
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||| ||| | |||||||| |||||||||||||||| |||| ||||||||||||||||| ||||||  ||||||||| ||||||||||||||| |||    
T  6465923 ttagattatgttcttgtaatttcagattcttccacttttggtccctcctttcatcacgtcagaagaatctgcataaattatgtccctgtaatttcaaatt 6466022  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    ||||||||||||| |||||||||||||| ||| || |||||||||||||||||||    
T  6466023 cctcccacttttgatccctgtaatttcatattactccacttttggtccctcattt 6466077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 268
Target Start/End: Complemental strand, 44817142 - 44816978
Alignment:
Q  104 agattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcc 203  Q
    ||||||||||| | |||||| | |||||| ||||||| |||| || |||||||| ||||  ||||||  |||||||||||| | |||| ||||| |||||    
T  44817142 agattttgtccttataatttcatattctttcacttttggtccctcttttcatcaagtcaatagaatctgcataaattacgtacatgtagtttcaaattcc 44817043  T
Q  204 tcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44817042 ttccacttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtgccatgt 44816978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 1250515 - 1250349
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| | |||||| | |||||||||||||| |||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||    
T  1250515 ttagattttgtccctttaatttcatattcttccacttttggtccctcctttcatcacgtcagaagaatctgcataaattacgtccctgtaatttcaaatt 1250416  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| | |||||||| |||||||| || |||||| |||||||  ||| ||||||||| || |||||    
T  1250415 cctcctatttttggtcactgtaattccatattcctccacttttaatccttcattttacatgacatgt 1250349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 149 - 268
Target Start/End: Original strand, 33162651 - 33162770
Alignment:
Q  149 ctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtc 248  Q
    ||||||||||||||| ||||||   ||||||||||| | |||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  33162651 ctttcatcacgtcagtagaatctgtataaattacgttcttgtaatttcaaattccttccacttttggtccgtgtaatttcagattacttcacttttggtc 33162750  T
Q  249 cctcattttacgtgccatgt 268  Q
    |||||||||| |||||||||    
T  33162751 cctcattttatgtgccatgt 33162770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 48648538 - 48648421
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    |||||||||||| |||||||||||||||||||||||| | |||| |||||||||||||||| |||||||  ||||||||||||||||||||||||| |||    
T  48648538 ttagattttgtctatgtaattttagattcttccacttctggtccctcctttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagatt 48648439  T
Q  202 cctcccacttttggtccct 220  Q
    ||| ||| |||||||||||    
T  48648438 cct-ccaattttggtccct 48648421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 25772640 - 25772523
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||| |||| |||||||  |||||||||||||| |||||||||| |||    
T  25772640 ttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagatt 25772541  T
Q  202 cctcccacttttggtccct 220  Q
    ||| |||||||||||||||    
T  25772540 cct-ccacttttggtccct 25772523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 24194941 - 24195014
Alignment:
Q  183 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  24194941 gtccctgtaatttcagattcctctcacttttggtccctataatttcagattcctccacttttggtccctcattt 24195014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 25772559 - 25772506
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  25772559 gtccttgtaatttcagattcctccacttttggtccctcattttacgtaccatgt 25772506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 48648457 - 48648404
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||||||| || |||||||||||| |||||||||||||||    
T  48648457 gtccctgtaatttcagattcctccaattttggtccctccttttacgtgccatgt 48648404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 7658040 - 7658108
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| |||||||||||||| | |||||| ||||||| |||| ||||||||||||||||||| ||||    
T  7658040 ttagattatgtccatgtaatttcaaattcttacacttttggtccatcctttcatcacgtcagcaaaatc 7658108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 28218248 - 28218316
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| || || || |||||||||||||||    
T  28218248 ttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtcagcagaatc 28218316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 16995268 - 16995336
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||  | || || |||||||||||||||    
T  16995268 ttagattttgtccctgtaatttcagattcttccacttttggtcccacattccaccacgtcagcagaatc 16995336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 24195105 - 24195037
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || |||||||| |||||||||    
T  24195105 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccatcacgtaagcagaatc 24195037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 33162830 - 33162776
Alignment:
Q  116 tgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||| | |||||||||||||||||| ||| ||||| |||||||||||||||    
T  33162830 tgtaatttcaaattcttccacttttagtctttcatttcaccacgtcagcagaatc 33162776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 44816907 - 44816972
Alignment:
Q  105 gattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||||| |||||||| |||||||||||||||| |||| || || || ||||| |||||||||    
T  44816907 gattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatc 44816972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 10409683 - 10409615
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||  |||||||||||||||||||||||||  ||| || || || ||||| |||||||||    
T  10409683 ttagattttgtctctgtaattttagattcttccacttttgatccctcattccaccacgttagcagaatc 10409615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 12006609 - 12006677
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| ||||||||||||||||  ||| || || || ||||| |||||||||    
T  12006609 ttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgttagcagaatc 12006677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 20458760 - 20458828
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||  |||||||| |||||||||||||||| |||| || || || ||||| |||||||||    
T  20458760 ttagattttgtcgctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatc 20458828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 23704970 - 23704902
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| |||||||||    
T  23704970 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatc 23704902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 28218257 - 28218297
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  28218257 gtccctgtaatttcagattcttccacttttggtccctcatt 28218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 38879793 - 38879861
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| |||||||||    
T  38879793 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatc 38879861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 44816913 - 44816953
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  44816913 gtccctgtaatttcagattcttccacttttggtccctcatt 44816953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 20963564 - 20963607
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtcc 145  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||    
T  20963564 ttagatttagtccctgtaattttagattcttccacttttggtcc 20963607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 20459044 - 20459074
Alignment:
Q  1 cagggacgaaaagaggtatttaccctatttt 31  Q
    |||||||||||||||||||||||||||||||    
T  20459044 cagggacgaaaagaggtatttaccctatttt 20459074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48672301 - 48672264
Alignment:
Q  1 cagggacgaaaagaggtatttaccctattttcttttgt 38  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  48672301 cagggacgaaaagaggtatttaccctaatttctattgt 48672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 1250279 - 1250343
Alignment:
Q  106 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||| | ||||||||||||||||||||||| |||  || || || ||||||||| |||||    
T  1250279 attttgtccttttaattttagattcttccacttttggtctctcattccaccacgtcagctgaatc 1250343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 12006618 - 12006658
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  12006618 gtccctgtaatttcagattcttccacttttgatccctcatt 12006658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 16995277 - 16995317
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||| | ||||||||||||| ||||    
T  16995277 gtccctgtaatttcagattcttccacttttggtcccacatt 16995317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 20419605 - 20419673
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | ||||||||| |||| |||| || || || ||||| |||||||||    
T  20419605 ttagattttgtccctgtaatttcatattcttccatttttggtccctcattccaccacgtaagcagaatc 20419673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 20458773 - 20458809
Alignment:
Q  219 ctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||| | ||||||||||||||||||    
T  20458773 ctgtaatttcagattcttccacttttggtccctcatt 20458809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 20963573 - 20963613
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||| |||||| | ||||||||||||||||||    
T  20963573 gtccctgtaattttagattcttccacttttggtccctcatt 20963613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 23704961 - 23704921
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  23704961 gtccctgtaatttcatattcttccacttttggtccctcatt 23704921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 25772432 - 25772500
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | ||||||||||||||  ||| || || || ||||| |||||||||    
T  25772432 ttagattttgtccttgtaatttcatattcttccacttttgttccctcattccaccacgtaagcagaatc 25772500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 38879802 - 38879842
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  38879802 gtccctgtaatttcatattcttccacttttggtccctcatt 38879842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 41600027 - 41600095
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||| |||  ||| || || || ||||| |||||||||    
T  41600027 ttagattttgtccctgtaatttcagattcttccacatttgatccctcattccaccacgttagcagaatc 41600095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 48648339 - 48648379
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||  |||| |||||||||||||||    
T  48648339 gtccctgtaatttcagattttttcatttttggtccctcatt 48648379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 48672348 - 48672416
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||| |||  |||||||| ||||||||||||||||  ||| || || || |||||||||||||||    
T  48672348 ttagatttcgtctctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcagaatc 48672416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 8e-61; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 17606377 - 17606543
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||| | |||||||| | |||||||||||||| |||| || |||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  17606377 ttagattttgttcctgtaatttcatattcttccacttttggtccctcatttcatcacgtcagcagaatctgtataaattacgtccctgtaatttcatatt 17606476  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  17606477 cctcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 17606543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 39711141 - 39711307
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |||||| |||||||||||||||||  |||||||||||||| ||||||||||||||    
T  39711141 ttagattttgtccttgtaatttcatattcttccacttttggtccctcctttaatcacgtcagcagaatctgcataaattacgtccttgtaatttcatatt 39711240  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  39711241 cctcccgcttttggtccctgtaatttcggattcctccacttttggtccctcattttacgtgccatgt 39711307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 105 - 268
Target Start/End: Complemental strand, 33628996 - 33628833
Alignment:
Q  105 gattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcct 204  Q
    |||||||||| |||||||| |||||||||||||||| |||| |||||| |||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  33628996 gattttgtccctgtaatttcagattcttccacttttggtccctcctttaatcacgtcagcagaatctacataaattatgtccctgtaatttcaaattcct 33628897  T
Q  205 cccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  33628896 cccgcttttggtccctgtaatttcagattcctctacttttggtccctcattttacgtgccatgt 33628833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 4907271 - 4907105
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||    
T  4907271 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagtagaatctgcataaattacgtccctgtaatttcagatt 4907172  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| |||||||||||||| ||||||||    
T  4907171 cctcctacttttggtccctgtaatttcagattcatccacttttagtccctcattttacatgccatgt 4907105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 43539416 - 43539582
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||| | |||    
T  43539416 ttagattttgtccctgtaattttatattgttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaattttagatt 43539515  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  43539516 cctcccacttttgctccctgtaatttcaaattcctccacttttggtacctcattttacgtgtcatgt 43539582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 30299300 - 30299466
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||  ||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||    
T  30299300 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatcaagtcaacagaatctccataaattacgtccctgtaatttcagatt 30299399  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||| || | ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  30299400 cctcccacttttagttcttgtaatttcagattcctccacttttggtccctcattttatgtgccatgt 30299466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 48072030 - 48072196
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | ||| ||||||||||  ||| |||||||||||| ||||||||||   ||||||||||||||||||||||||| |||    
T  48072030 ttagattttgtccctgtaatttcatattattccacttttgctccctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcaaatt 48072129  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  48072130 cctcccacttttgatccctgtaatttcagattcctccacttttggtccctcattttacgtgacatgt 48072196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 24467697 - 24467862
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||| ||||  ||||||  |||||||||||||  ||||||||||||||    
T  24467697 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcattagaatctgcataaattacgtcattgtaatttcatatt 24467796  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||||||||||||||||| || ||| |||||| ||||||||||||||||||||    
T  24467797 cctcccacttttggtccctgtaatttcagattactccacatttggt-cctcattttacgtgccatgt 24467862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 39970954 - 39970789
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||| | ||||||||||||||||||||||| ||||||||  ||||||| ||||| | |||    
T  39970954 ttagattttgtccctgtaattttagatccttccacttttggtcccttctttcatcacgtcagcagaatccgcataaattgtgtccctgaaattttagatt 39970855  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||||||||||||    
T  39970854 cctcccacttttggt-catgtaatttcagattcatccacttttggtccctcattttacgtgccatgt 39970789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 118 - 268
Target Start/End: Complemental strand, 42510307 - 42510157
Alignment:
Q  118 taattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtc 217  Q
    |||||| |||||||||||||| || ||| || |||||||||||||||||||||  ||||||||||  ||||||||||||| |||||||||||||||||||    
T  42510307 taatttcagattcttccacttgtattccctcatttcatcacgtcagcagaatctgcataaattacacccctgtaatttcagattcctcccacttttggtc 42510208  T
Q  218 cctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  42510207 cctgtaatttcagattcctccacttttggtccctcatttcacgtgccatgt 42510157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 111 - 268
Target Start/End: Original strand, 20995747 - 20995903
Alignment:
Q  111 gtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccact 210  Q
    |||| |||||||||| |||||| ||||||| |||| | ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  20995747 gtccctgtaattttatattctttcacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccact 20995846  T
Q  211 tttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||| ||||||||||||||| ||| || |||||||||||||||| ||||||||||||||    
T  20995847 tttcgtccctgtaatttcaaatttctccacttttggtccctca-tttacgtgccatgt 20995903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 102 - 263
Target Start/End: Original strand, 29696633 - 29696793
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    |||||||||||||  ||||||| | |||||||||||||| |||  |||||||||||| || ||||||||  ||||||||| |||||| ||||||||||||    
T  29696633 ttagattttgtccccgtaatttcatattcttccactttttgtcactcctttcatcacatcggcagaatctgcataaattatgtccctataatttcatatt 29696732  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgc 263  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  29696733 cctcccac-tttggtccctgtattttcagattcctccacttttggtccctcattttacgtgc 29696793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 39826355 - 39826193
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||||    |||||||||||||| ||||  ||| |||||||||| |||||||| | |||    
T  39826355 ttagattttgtccctgtaatttcagattcttccacttttggtcctt----tcatcacgtcagcaaaatctgcatcaattacgtccttgtaattttagatt 39826260  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  39826259 cctcccacttttgatccctgtaatttcatattcctccacttttgatccctcattttacgtgccatgt 39826193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 52058317 - 52058154
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||| ||||| |||||||| |||||||||||||||| |||| |||||||||||||||||   ||||  |||||||||||||||| | |||||| |||    
T  52058317 ttagattatgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcag---aatctgcataaattacgtccctatgatttcagatt 52058221  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||| |||||||||| ||| || ||||||||||||||||||||||||| |||||    
T  52058220 cctcccacttttggtccttgtaatttcatattactccacttttggtccctcattttacgtgtcatgt 52058154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 18462354 - 18462519
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||||| |||| |||| ||||||||||| ||||  ||||||  |||||||||||||  ||||||||||||||    
T  18462354 ttagattttgtccctgtaatttcagattcttccatttttggtccctcctttcatcaagtcattagaatctgcataaattacgtcattgtaatttcatatt 18462453  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||| |||||||| ||| || ||| |||||| ||||||||| ||||||||||    
T  18462454 cctcccacttttggtccctataatttcatattactccacgtttggt-cctcattttgcgtgccatgt 18462519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 268
Target Start/End: Original strand, 13229803 - 13229966
Alignment:
Q  104 agattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcc 203  Q
    ||||||||| | |||||||| | ||||||||||||||  ||  ||||||||||| |||| || ||||  ||||||||||||||||||||||||| |||||    
T  13229803 agattttgtgcttgtaatttcatattcttccacttttgatcactcctttcatcaagtcaacataatctgcataaattacgtccctgtaatttcagattcc 13229902  T
Q  204 tcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    || |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  13229903 tctcacttttggt-cctgtaatttcagattcctccacttttggtccctcattttgcgtgtcatgt 13229966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 8292873 - 8293042
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| || ||||| | |||||||||||||| || | || |||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  8292873 ttagattttgtccctgaaatttcatattcttccacttttggttcctcttttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 8292972  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcactt---ttggtccctcattttacgtgccatgt 268  Q
    ||||| ||||||||||| |||||||| |||||||| |||||   || |||||||||||| | ||||||||    
T  8292973 cctcctacttttggtccatgtaattttagattcctccactttaattagtccctcatttttcatgccatgt 8293042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 34749414 - 34749297
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||| ||| |||||||| |||||||||||||||| || | |||||| |||||||||||||||||  |||||||||| |||||||||||||| |||    
T  34749414 ttagattttatccctgtaatttcagattcttccacttttggtacctcctttaatcacgtcagcagaatctgcataaattacatccctgtaatttcagatt 34749315  T
Q  202 cctcccacttttggtccct 220  Q
    ||| |||||||||||||||    
T  34749314 cct-ccacttttggtccct 34749297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 7474002 - 7473935
Alignment:
Q  201 tcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  7474002 tcctcccacttttggtccttgtaatttcagattcctccacttttgatccatcatttcacgtgccatgt 7473935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 16294256 - 16294138
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||| ||||||||| |||| |  ||| | || ||||||||||||  |||||||||||||||||||||||   |||    
T  16294256 ttagattttgtccttgtaatttcatattcctccacttttggtcccttatttaaccatgtcagcagaatctacataaattacgtccctgtaatttatgatt 16294157  T
Q  202 cctcccacttttggtccct 220  Q
    ||  |||||||||||||||    
T  16294156 ccatccacttttggtccct 16294138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 34749332 - 34749280
Alignment:
Q  216 tccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  34749332 tccctgtaatttcagattcctccacttttggtccctcattttacatgccatgt 34749280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 215149 - 215061
Alignment:
Q  174 ataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtg 262  Q
    ||||||||||||  |||||||||| ||| ||| |||||| ||||| |||||||| |||||||| |||||||||||  |||||| |||||    
T  215149 ataaattacgtcattgtaatttcagatttctctcactttcggtccgtgtaatttaagattcctccacttttggtcattcatttcacgtg 215061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 24467936 - 24467868
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| || ||||| |||||||| ||||||    
T  24467936 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagtagaatc 24467868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 29696867 - 29696799
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||||||||||||||||| |||||||||||||||| |||| || || || ||||| |||||||||    
T  29696867 ttagattttgtccatgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatc 29696799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 42510083 - 42510151
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| || ||||| ||| |||||||||||    
T  42510083 ttagattttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacatcagcagaatc 42510151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 30299540 - 30299472
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| || || || ||||| || ||||||    
T  30299540 ttagattttgtccctgtaattttagattcttccacttttggtccctcattccaccacgtaagaagaatc 30299472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 39970715 - 39970783
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||||||| ||||||||| |||||||||||||||| |||| || || || |||||||||| ||||    
T  39970715 ttagattttgtctatgtaatttcagattcttccacttttggtccctcattccaccacgtcagcaaaatc 39970783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 30780348 - 30780270
Alignment:
Q  127 attcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctc 205  Q
    |||| |||||||||  |||||| ||  |||||||||||||||||   ||||||||||||  ||||||||||||||||||    
T  30780348 attcctccacttttgatccttcattcaatcacgtcagcagaatctgtataaattacgtcattgtaatttcatattcctc 30780270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 24467927 - 24467886
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  24467927 gtccctgtaatttcagattcttccacttttggtccctcattt 24467886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 52058089 - 52058130
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  52058089 gtccctgtaatttcagattcttccacttttggtccctcattt 52058130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 4907031 - 4907099
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||||||| |||||    
T  4907031 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagccgaatc 4907099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 18462593 - 18462525
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||||||||  ||||||| |||||||||||||||| |||  || ||||| ||||||| |||||||    
T  18462593 ttagattttgtccccgtaatttcagattcttccacttttggtctctcatttcaccacgtcaacagaatc 18462525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 33628768 - 33628808
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  33628768 gtccccgtaatttcagattctttcacttttggtccctcatt 33628808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 39826119 - 39826187
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| ||||||||||||||||  ||| || || || ||||| |||||||||    
T  39826119 ttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgttagcagaatc 39826187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 52058088 - 52058148
Alignment:
Q  110 tgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||| |||||||| |||||||||||||||| |||| || ||||| ||| |||||||||||    
T  52058088 tgtccctgtaatttcagattcttccacttttggtccctcatttcaccacatcagcagaatc 52058148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 17606617 - 17606574
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtcc 145  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||    
T  17606617 ttagattttgtccttgtaatttcagattcttccacttttggtcc 17606574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 17502030 - 17501993
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctc 252  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  17502030 gtccctgtaatttcagattcctccacttttagtccctc 17501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 4907040 - 4907080
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  4907040 gtccctgtaatttcatattcttccacttttggtccctcatt 4907080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 8293116 - 8293048
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || || |||||| |||||    
T  8293116 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccatgtcagccgaatc 8293048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 8293107 - 8293067
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  8293107 gtccctgtaatttcatattcttccacttttggtccctcatt 8293067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 17502039 - 17501971
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||||| |||||||| |||||| |||||||||||||| || ||| | |  ||||||||||||    
T  17502039 ttagattctgtccctgtaatttcagattcctccacttttagtccctcgtttaaccctgtcagcagaatc 17501971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 20995977 - 20995909
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||  |||||||| | |||||||||||||| |||| |  || || |||||||||||||||    
T  20995977 ttagattttgtctctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatc 20995909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 29696858 - 29696818
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||| ||||||||||||||| | ||||||||||||||||||    
T  29696858 gtccatgtaatttcagattcttccacttttggtccctcatt 29696818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 30299531 - 30299491
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||| |||||| | ||||||||||||||||||    
T  30299531 gtccctgtaattttagattcttccacttttggtccctcatt 30299491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 39826128 - 39826168
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  39826128 gtccctgtaatttcagattcttccacttttgatccctcatt 39826168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 48072270 - 48072202
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||||| |||||||| | |||||||||||||| |  | || ||||| |||||||||||||||    
T  48072270 ttagattatgtccctgtaatttcatattcttccacttttgggtcctcatttcaccacgtcagcagaatc 48072202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 46046733 - 46046567
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||||||||||  ||| ||||||||||||||||||| ||||  ||| |||||||||| |||||||||| |||    
T  46046733 ttagattttgtccctgtaatttcagattcttccacttttgatccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagatt 46046634  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  46046633 cctcccacttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgt 46046567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 3018081 - 3018247
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||| || |||||||||| |||    
T  3018081 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacggccttgtaatttcacatt 3018180  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||    
T  3018181 cctcccacttttggtccctataatttcaaattcctccacttttggtccctcattttacgtgtcatgt 3018247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 9396768 - 9396934
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| | |||||| | ||| |||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  9396768 ttagattttgtccctataatttcaaatttttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 9396867  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  9396868 cctcccacttttgatccctgtaatttcatattcctccacttttggtccctcattttacgtgtcatgt 9396934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 34064291 - 34064125
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||  |||||||| |||||||||||||||| |||| | ||||||||||||||||||||||  |||||||||||||| |||||||||| |||    
T  34064291 ttagattttgtctctgtaatttcagattcttccacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagatt 34064192  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  34064191 cctcctacttttggtccctgtaatttcagattcctccacttttagtccctcattttacatgccatgt 34064125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 37013016 - 37012850
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||  ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  37013016 ttagattttgtccctgtaatttcatattcttccacttttggtcactcctttcatcacgtcagcaaaatctgcataaattacgtccctgtaatttcatatt 37012917  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    | ||| ||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  37012916 cttcctacttttggtccttgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 37012850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 9516919 - 9516760
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||| |||| || ||||  |||||||||||||| |||||||||| |||    
T  9516919 ttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaacaaaatctacataaattacgtccttgtaatttcagatt 9516820  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgt 261  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9516819 cctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgt 9516760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 102 - 265
Target Start/End: Original strand, 9619049 - 9619211
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||  ||||||| |||||||||||||||||||||    
T  9619049 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgcataaat-acgtccctgtaatttcatatt 9619147  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgcca 265  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  9619148 cctcccatttttggtccctgtaatttcagattcctccacttttgctccctctttttacgtgcca 9619211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 7819083 - 7819249
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| || | |||||||||||||| || | ||||  ||| |||||||||| |||||||||| |||    
T  7819083 ttagattttgtccctgtaatttcagattcttccacttttggttcctcctttcatcacgttagtaaaatctgcatcaattacgtccatgtaatttcagatt 7819182  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  7819183 cctcccacttttggtccatgtaatttcatattcctccacttttggtccctcattttacgtgccatgt 7819249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 15640784 - 15640950
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||| ||||||| |||| |||||||||||| ||||||||||   ||||||||||||||||||||||||| |||    
T  15640784 ttagattttgtccctgtaatttcatattctttcacttttggtccctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcagatt 15640883  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  15640884 cctcccacttttgatccttgtaatttcagattcctccacttttggtccatcattttacgtgtcatgt 15640950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 38574277 - 38574111
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |||||||||||||||| || ||||  ||| |||| |||||||||||||||| |||    
T  38574277 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcaacaaaatctgcatcaattgcgtccctgtaatttcagatt 38574178  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  38574177 cctcccacttttggtctctgtaatttcatattcctccacttttggtccctcattttacatgccatgt 38574111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 4355950 - 4356116
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    |||||||||||| ||||||||| | |||||| ||||||| |||| || ||||||||||| |||||||||  |||||||||||||| |||||||||| |||    
T  4355950 ttagattttgtctatgtaatttcatattctttcacttttggtccctcatttcatcacgttagcagaatctgcataaattacgtccttgtaatttcagatt 4356049  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| ||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  4356050 cctcctacttttggtccttgtaatttcaaattcctccacttttggtccctcattttacgtgtcatgt 4356116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 31090370 - 31090204
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||| ||||  ||||||  |||||||||||||| |||||||||| |||    
T  31090370 ttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaatagaatctacataaattacgtccttgtaatttcagatt 31090271  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
     ||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  31090270 tctcccacttttggtccccgtaatttcagattcctccacttttggtccttcattttacgtaccatgt 31090204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 102 - 265
Target Start/End: Original strand, 31944019 - 31944182
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||  |||||||||||||||| || || |  ||| ||||| |||| |||||||||| |||    
T  31944019 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatcacgtcaacaaaacctgcatcaattatgtccatgtaatttcagatt 31944118  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgcca 265  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  31944119 cctcccacttttggtccatgtaatttcagattcctccacttttggtccctcattttacgtgcca 31944182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 48580175 - 48580009
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | ||| |||||||||| |||| |||||||||||| | ||||||||   |||||||||||||| |||||||||| |||    
T  48580175 ttagattttgtccctgtaatttcatattgttccacttttggtccctcctttcatcaccttagcagaatatgcataaattacgtccttgtaatttcaaatt 48580076  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||| || |||||||| |||||| |||||||| ||||||||||||||||||||||    
T  48580075 cctcccacttttggtctctctaatttcaaattcctccacttttgctccctcattttacgtgccatgt 48580009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 103 - 268
Target Start/End: Original strand, 3273692 - 3273855
Alignment:
Q  103 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattc 202  Q
    |||||||||||| |||||||| | |||||||||||||| |||| ||||||||||| ||||  ||||||  |||||||||||||| |||||||||||||||    
T  3273692 tagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcaagtcattagaatctgcataaattacgtccttgtaatttcatattc 3273791  T
Q  203 ctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||| |||||||||||||||| || ||| |||||| ||||||||||||||||||||    
T  3273792 ctcccacttttggt-cctgtaatttcagattactccacgtttggt-cctcattttacgtgccatgt 3273855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 18667387 - 18667524
Alignment:
Q  131 ttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcag 230  Q
    |||||||||| |||| |||||||||||||||| || ||||  ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |     
T  18667387 ttccacttttggtccctcctttcatcacgtcaacaaaatctgcataaattacgtccctgtaatttcagattcctccaacttttggtccctgtaattttaa 18667486  T
Q  231 attccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||| |||||||||||||||||||||||||||||||    
T  18667487 attcctccacttttggtccctcattttacgtgccatgt 18667524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 18713029 - 18713188
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | ||| ||||| |||| |||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||    
T  18713029 ttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctgcataaattacgtccctgtaatttcagatt 18713128  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgt 261  Q
    |||||| |||||||||| |||||||||| ||||||  ||||||||||||||| |||||||    
T  18713129 cctccctcttttggtccatgtaatttcaaattcctcaacttttggtccctcagtttacgt 18713188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 13132250 - 13132084
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||| ||||| |||||||| | |||||||||||||| |||| | |||||||||  |||||||||||  |||||||||||||| ||||||||||||||    
T  13132250 ttagattctgtccctgtaatttcatattcttccacttttggtcccttctttcatcaaatcagcagaatctgcataaattacgtccttgtaatttcatatt 13132151  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
     |||||||||||||||| |||||||||||||| || ||||||| | ||||||||||||||| |||||    
T  13132150 tctcccacttttggtccatgtaatttcagattactccacttttagcccctcattttacgtgtcatgt 13132084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 26252337 - 26252455
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||  ||||||||||||||||||||||||| |||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagatt 26252436  T
Q  202 cctcccacttttggtccct 220  Q
    |||||||||||||||||||    
T  26252437 cctcccacttttggtccct 26252455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 35376231 - 35376346
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||||||||||||||||| ||||||||| |||| |||||   || |||    
T  35376231 ttagattttgtctctgtaattttagattcttccacttttggtctctcctttcatcacgtcagcagaatccgcataaattaagtccatgtaa---cagatt 35376327  T
Q  202 cctcccacttttggtccct 220  Q
    |||||||||||||||||||    
T  35376328 cctcccacttttggtccct 35376346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 48259901 - 48259986
Alignment:
Q  183 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||| |||||||||| |||||||| ||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  48259901 gtccatgtaatttcagattcctcctacttttggtccctgttatttcagattcctccacttttgatccctcattttacgtgccatgt 48259986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 41947165 - 41947070
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttca 197  Q
    ||||||||||||| |||||||| | ||| |||||||||| |||| | ||||||| | |||| |||||||  |||||||||||||||||||||||||    
T  41947165 ttagattttgtccttgtaatttcatatttttccacttttggtccctgctttcataaagtcaacagaatctgcataaattacgtccctgtaatttca 41947070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 26252418 - 26252472
Alignment:
Q  215 gtccctgtaatttcagattccttc-acttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  26252418 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgccatgt 26252472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 9397008 - 9396940
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||||||| | || || || || |||||||||||||||    
T  9397008 ttagattttgtccctgtaatttcagattcttccacttttggaccatcattccaacacgtcagcagaatc 9396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 9619288 - 9619220
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| ||||||| || || ||||| |||||||||    
T  9619288 ttagattttgtccttgtaatttcatattcttccacttttggtccttcattccaccacgtaagcagaatc 9619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 13132010 - 13132078
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||| |||||||||| ||||||||||||||||  ||| || ||||| |||||||||||||||    
T  13132010 ttagattatgttcatgtaatttcagattcttccacttttgatccctcatttcaccacgtcagcagaatc 13132078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 31944259 - 31944191
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||||||||||||||||| | |||||||||||||| |||| || || || ||||||| |||||||    
T  31944259 ttagattttgtccatgtaatttcatattcttccactttttgtccctcattccaccacgtcaacagaatc 31944191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 37012776 - 37012844
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |  || || |||||||||||||||    
T  37012776 ttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatc 37012844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 38574037 - 38574105
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || |||||||||||||||    
T  38574037 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagcagaatc 38574105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 7819322 - 7819255
Alignment:
Q  103 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||||||| |||||| | |||||||||||||||| |||| || || || |||||||||||||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtcagcagaatc 7819255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 15641024 - 15640957
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaat 169  Q
    ||||||| ||||| |||||||| |||||||||||||||| || | || ||||| ||||||||||||||    
T  15641024 ttagattatgtccctgtaatttcagattcttccacttttggttcctcatttcaccacgtcagcagaat 15640957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 3273929 - 3273861
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||| ||| |||||||| ||||||||||||||||  ||| || ||||| |||||||| ||||||    
T  3273929 ttagattttatccctgtaatttcagattcttccacttttgatccctcatttcaccacgtcagtagaatc 3273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 9516679 - 9516747
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| |||||||||    
T  9516679 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatc 9516747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 31090130 - 31090197
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaat 169  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| ||||||||    
T  31090130 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaat 31090197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 15641015 - 15640974
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    |||||||||||||||||||| | |||||||||| ||||||||    
T  15641015 gtccctgtaatttcagattcttccacttttggttcctcattt 15640974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 26252346 - 26252383
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctc 252  Q
    |||||||||||||||||||| | |||||||||||||||    
T  26252346 gtccctgtaatttcagattcttccacttttggtccctc 26252383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 36888980 - 36888943
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctc 252  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  36888980 gtccctgtaatttcagattcctccacttttagtccctc 36888943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 43312287 - 43312324
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctc 252  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  43312287 gtccctgtaatttcagattcctccacttttagtccctc 43312324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 3273919 - 3273879
Alignment:
Q  216 tccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    ||||||||||||||||||| | |||||||| ||||||||||    
T  3273919 tccctgtaatttcagattcttccacttttgatccctcattt 3273879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 7819314 - 7819274
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||| |||||||| | ||||||||||||||||||    
T  7819314 gtccctgtaatgtcagattcttccacttttggtccctcatt 7819274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 18713269 - 18713201
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||  |||||||| ||||||||||| |||| |||| |  || || |||||||||||||||    
T  18713269 ttagattttgtctctgtaatttcagattcttccagttttggtcccttattccaccacgtcagcagaatc 18713201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 31090139 - 31090179
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  31090139 gtccctgtaatttcatattcttccacttttggtccctcatt 31090179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 34064051 - 34064119
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||  |||||||| |||||||||||||||| |||| || || || ||| ||||| |||||    
T  34064051 ttagattttgtctctgtaatttcagattcttccacttttggtccctcattccaccacatcagccgaatc 34064119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 34064064 - 34064100
Alignment:
Q  219 ctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||| | ||||||||||||||||||    
T  34064064 ctgtaatttcagattcttccacttttggtccctcatt 34064100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 35376433 - 35376369
Alignment:
Q  106 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||| |||||||| ||| |||||||||||| |||| || || || |||||||||| ||||    
T  35376433 attttgtccctgtaatttcagaatcttccacttttggtccctcattccaccacgtcagcaaaatc 35376369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 35376428 - 35376388
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||||| || | ||||||||||||||||||    
T  35376428 gtccctgtaatttcagaatcttccacttttggtccctcatt 35376388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 36888989 - 36888921
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||||| |||||||| |||||| |||||||||||||| || ||| | |  ||||||||||||    
T  36888989 ttagattatgtccctgtaatttcagattcctccacttttagtccctcgtttaaccttgtcagcagaatc 36888921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 37012785 - 37012821
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccct 251  Q
    |||||||||||||||||||| | ||||||||||||||    
T  37012785 gtccctgtaatttcagattcttccacttttggtccct 37012821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 38574046 - 38574086
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  38574046 gtccctgtaatttcatattcttccacttttggtccctcatt 38574086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 48260060 - 48259992
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | ||||||||||||||  ||  || || ||||||||||||| ||||    
T  48260060 ttagattttgtccctgtaatttcaaattcttccacttttgatcgctcattccatcacgtcagcataatc 48259992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 14262345 - 14262179
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | ||| ||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| | |||    
T  14262345 ttagattttgtccctgtaatttcatattgttccacttttagtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaattttagatt 14262246  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||| ||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  14262245 ccttccacttttgatccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 14262179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 30500350 - 30500184
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | ||| |||||||||| |||| ||||||||||||||||||| ||||  |||||||||| |||||||||||||| |||    
T  30500350 ttagattttgtccctgtaatttcatattgttccacttttggtccctcctttcatcacgtcagcaaaatctacataaattacatccctgtaatttcagatt 30500251  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30500250 cctcccacttttggtccatgtaatttcaaattccttcacttttggtccctcattttacgtgccatgt 30500184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 14161940 - 14162106
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||| ||||| |||||||| | |||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  14161940 ttagattatgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 14162039  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| | |||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||    
T  14162040 cctcctaattttggtccctgtaatttcaaattcctccatttttggtccctcattttacgtgccatgt 14162106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 14171895 - 14171729
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||| ||||  ||| ||||||| || |||||||||| |||    
T  14171895 ttagattttgtccctgtaatttctgattcttccacttttggtccttcctttcatcacgtcagcaaaatctgcatcaattacgaccttgtaatttcagatt 14171796  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||    
T  14171795 cctcccacttttggtccctgtaatttcagattcctccatttttgatccctcattttacgtgccatgt 14171729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 16722060 - 16722226
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    |||||||||||||||||||||| |||||||||||||||| |||| | ||||||||| |||| |||||||  ||||||||| ||| ||||||||||| |||    
T  16722060 ttagattttgtccatgtaatttcagattcttccacttttggtcccttctttcatcaagtcaacagaatctgcataaattatgtcactgtaatttcagatt 16722159  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  16722160 cctcccacttctggtccctgtaatttcagattcctccacttttggtccctcattttacgtgtcatgt 16722226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 45969984 - 45970150
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||| ||||||| |||  ||||||||||| |||| |||||||  ||||||||||||||||||||||||| |||    
T  45969984 ttagattttgtccctgtaatttcagattctttcacttttggtctctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagatt 45970083  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  45970084 cctcccacttttggtccctgtaatttcagatttctccacttttggtccctcattttacgtgtcatgt 45970150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 103 - 268
Target Start/End: Original strand, 21632966 - 21633131
Alignment:
Q  103 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattc 202  Q
    ||||| |||||| |||||||| |||||||| ||||||| |||| ||||||||||| |||| |||||||  ||||||||||||||||||||||||| ||||    
T  21632966 tagatgttgtccctgtaatttcagattctttcacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattc 21633065  T
Q  203 ctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  21633066 ctcccacttttggtccttgtaatttcagattcctccacttttggtccctcattttatgtgccatgt 21633131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 19113074 - 19112908
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||| ||| |||||||| ||||||||| |||||| |||| ||||||||||| |||| |||||||  |||||||||||||| |||||||||| |||    
T  19113074 ttagattttatccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagatt 19112975  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||    
T  19112974 cctcccacttttggtccctgtaatttcagatttctccacttttggtccctcattttacgtaccatgt 19112908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 45003565 - 45003731
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |||||||||||||||| |||||||   ||||||||||||| |||||||||| |||    
T  45003565 ttagattttgtccctgtaatttcagattcttccactttttgtccctcctttcatcacgtcaacagaatctgtataaattacgtccttgtaatttcagatt 45003664  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||| ||||||||    
T  45003665 cctcccacttttgttccctgtaatttcatattcctccacttttgatccctcattttacatgccatgt 45003731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 52552997 - 52552835
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||  |||||||| | |||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  52552997 ttagattttgtctctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 52552898  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  52552897 cctccc----ttggtccctgtaatttcaaattccttcacttttggtccctcattttacgtgtcatgt 52552835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 5800674 - 5800840
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||| ||||| |||||||| | ||||||||| |||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  5800674 ttagattatgtccctgtaatttcatattcttccatttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 5800773  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| | |||||||||||||||||||| |||||| || ||||||||||||||||||| ||||||||    
T  5800774 cctcctagttttggtccctgtaatttcaaattcctccatttttggtccctcattttacatgccatgt 5800840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 20854005 - 20853839
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||| |||| || ||||  ||||||||| ||| ||||||||||| |||    
T  20854005 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacataatctgcataaattatgtcactgtaatttcagatt 20853906  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||| ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  20853905 cctcccacttctggtctctgtaattttagattcctccacttttggtccctcattttacgtgccatgt 20853839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 15328529 - 15328689
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | ||||||||| |||  |||| || ||||||||||||| |||||||  ||||||||||||||||||||||||| |||    
T  15328529 ttagattttgtccctgtaatttcatattcttccagtttgtgtccctcttttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagatt 15328628  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtg 262  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  15328629 cctcccacttttggtccctgtaatttcaaattcctccacttttggtctctcattttacgtg 15328689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 9267284 - 9267125
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||| | ||||||||| |||||| |||| ||||||||||| |||| |||||||  ||||||||| |||| |||||||||| |||    
T  9267284 ttagattttgtccctgtaatatcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcataaattaagtccttgtaatttcagatt 9267185  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgt 261  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  9267184 cctcccacttttggtccttgtaatttcagattcctccacttttggtccctcattttacgt 9267125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 106 - 268
Target Start/End: Complemental strand, 17465672 - 17465511
Alignment:
Q  106 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctc 205  Q
    ||||||||| ||||| ||||||||||| ||||||| |||| |||||||||||||||| || |||   ||||||||||||| ||||||||||| |||||||    
T  17465672 attttgtccctgtaactttagattctttcacttttggtccctcctttcatcacgtcaacaaaatttacataaattacgtctctgtaatttcagattcctc 17465573  T
Q  206 ccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  17465572 ccacttttggt-cctgtaatttcatattcctccacttttggtccctcattttacgtgccatgt 17465511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 43572458 - 43572620
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcac---gtcagcagaatccccataaattacgtccctgtaatttcat 198  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |||||||||||    ||||||||||||  || || ||||||||||||||||||||    
T  43572458 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcatcaagtcagcagaatctgcacaa-ttacgtccctgtaatttcat 43572556  T
Q  199 attcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtg 262  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||    
T  43572557 attcctcccacttttggtccctgtaatttcaaattactccacttttggtccctcattttacgtg 43572620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 33372475 - 33372635
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||| |||||||||| |||| ||||||||||||||||||| ||||  ||| ||||| |||| |||||||||| |||    
T  33372475 ttagattttgtccctgtaatttcagattattccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattaagtccttgtaatttcagatt 33372574  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtg 262  Q
    |||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||||||||    
T  33372575 cctcccacttttggtctctgtaatttcatattcctccacttttgatccctcattttacgtg 33372635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 38283619 - 38283785
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||| | | |||||| | ||| ||||||||||  ||| ||||||||||||||||||||||||  ||||| ||||||||||||||||| | |||    
T  38283619 ttagattttgttcctataatttcatattgttccacttttgatccctcctttcatcacgtcagcagaatctacataagttacgtccctgtaatttaagatt 38283718  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||| |||| |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  38283719 cctcccactttttgtccgtgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 38283785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 47575581 - 47575415
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||  |||||||| ||||| ||| |||||| |||  ||||||||||||||||||||||||  |||||||||  |||||||||||||| |||    
T  47575581 ttagattttgtctctgtaatttcagatttttcaacttttggtctctcctttcatcacgtcagcagaatctgcataaattatatccctgtaatttcaaatt 47575482  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||| |||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  47575481 cctcccattttttgtccctgtaatttcaaattcctccacttttgatccctcattttacgtgccatgt 47575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 49986597 - 49986763
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||| |||||| |||  |||||||||||  | |  ||||||  |||||||||||||| |||||||||| |||    
T  49986597 ttagattttgtccctgtaatttcagattcttctacttttggtctctcctttcatcaatttaatagaatctgcataaattacgtccttgtaatttcagatt 49986696  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  49986697 cctctcacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtaccatgt 49986763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 11003801 - 11003943
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||| |||| || |||   ||| ||||||||||||||||||||| |||    
T  11003801 ttagattttgtccttgtaatttcagattcttccacttttggtccatcctttcatcaagtcaacaaaatatgcatcaattacgtccctgtaatttcagatt 11003900  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcactttt 244  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  11003901 cctcccacttttggtccctgtaatttcagattcctccactttt 11003943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 117 - 268
Target Start/End: Complemental strand, 35995972 - 35995821
Alignment:
Q  117 gtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggt 216  Q
    ||||||| |||||||||||||||| |||| | ||||||||||||| ||||||||  |||||||||||||| ||||  || | ||||||||||||||| ||    
T  35995972 gtaatttcagattcttccacttttggtcccttctttcatcacgtccgcagaatctgcataaattacgtccttgtatatttagattcctcccactttttgt 35995873  T
Q  217 ccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||| |||||    
T  35995872 ccctgtaatttcatgttcctccacttttggtccctcattttacgtgtcatgt 35995821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 120 - 268
Target Start/End: Complemental strand, 4204999 - 4204851
Alignment:
Q  120 attttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccc 219  Q
    |||| ||||||||||||||||  ||| || ||| |||||||||| ||||||  |||||||||| ||| | |||||||| |||||||||||| |||||| |    
T  4204999 atttcagattcttccacttttgatccctctttttatcacgtcagtagaatctgcataaattacatccatataatttcagattcctcccactattggtctc 4204900  T
Q  220 tgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||| ||| || |||||||||||||||||||||||||||||||    
T  4204899 tgtaatttcatattactccacttttggtccctcattttacgtgccatgt 4204851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 17649319 - 17649224
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttca 197  Q
    ||||||||||||| |||||||| ||||| |||||| ||| |||  |||||| |||| |||| |||||||  |||||||||||||||||||||||||    
T  17649319 ttagattttgtccctgtaatttcagattattccacatttggtctctccttttatcaagtcaacagaatctgcataaattacgtccctgtaatttca 17649224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 4204777 - 4204845
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||||| |||||||| |||||||||||||||| |||| || ||||| |||||||||||||||    
T  4204777 ttagattatgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatc 4204845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 43572700 - 43572632
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||||| |||||||| |||||||||||||||| |||| || ||||| |||||||||||||||    
T  43572700 ttagattctgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatc 43572632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 35995747 - 35995815
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| || || || ||||| |||||||||    
T  35995747 ttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatc 35995815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 38283859 - 38283791
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| | |||||| ||||||||||||||||  ||| |  |||||||||||||||||||||    
T  38283859 ttagattttgtccctataatttcagattcttccacttttgatcccttatttcatcacgtcagcagaatc 38283791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 35740884 - 35740927
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtcc 145  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  35740884 ttagattttgtccctgtaattttaaattcttccacttttagtcc 35740927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 36990969 - 36990926
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtcc 145  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  36990969 ttagattctgtccctgtaattttagattcttccacttttagtcc 36990926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 37016409 - 37016366
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtcc 145  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  37016409 ttagattctgtccctgtaattttagattcttccacttttagtcc 37016366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 4204786 - 4204827
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  4204786 gtccctgtaatttcagattcttccacttttggtccctcattt 4204827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 43572691 - 43572650
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcattt 256  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  43572691 gtccctgtaatttcagattcttccacttttggtccctcattt 43572650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 9267044 - 9267112
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| |||||||||    
T  9267044 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccagcacgtaagcagaatc 9267112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 14171655 - 14171723
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | ||||||||||||||  ||| || || || |||||||||||||||    
T  14171655 ttagattttgtccctgtaatttcaaattcttccacttttgatccctcattccaccacgtcagcagaatc 14171723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 14262105 - 14262173
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |  || || ||| |||||||||||    
T  14262105 ttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacatcagcagaatc 14262173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 15328769 - 15328701
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| ||||| |||||||||| |||| |  || || |||||||||||||||    
T  15328769 ttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatc 15328701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 21633205 - 21633137
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| || || || ||||| || ||||||    
T  21633205 ttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagaagaatc 21633137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 21633196 - 21633156
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  21633196 gtccctgtaatttcagattcttccacttttggtccctcatt 21633156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 30500110 - 30500178
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |  || || |||||||||||||||    
T  30500110 ttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatc 30500178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 35995756 - 35995796
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  35995756 gtccctgtaatttcagattcttccacttttggtccctcatt 35995796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 14162180 - 14162137
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtcc 145  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||    
T  14162180 ttagattttgtccttgtaatttcagattcttccacttttggtcc 14162137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 32998443 - 32998376
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaat 169  Q
    ||||||| ||||| |||||||| |||||| |||||||||||||| || ||| | || |||||||||||    
T  32998443 ttagattctgtccctgtaatttcagattcctccacttttagtccctcgtttaaccatgtcagcagaat 32998376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 33372713 - 33372675
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccactttt 140  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  33372713 ttagattttgtccctgtaatttcagattcttccactttt 33372675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 52552761 - 52552799
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccactttt 140  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  52552761 ttagattttgtccctgtaatttcagattcttccactttt 52552799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 32998434 - 32998397
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctc 252  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  32998434 gtccctgtaatttcagattcctccacttttagtccctc 32998397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 9267053 - 9267093
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  9267053 gtccctgtaatttcatattcttccacttttggtccctcatt 9267093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 14262114 - 14262150
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccct 251  Q
    |||||||||||||||||||| | ||||||||||||||    
T  14262114 gtccctgtaatttcagattcttccacttttggtccct 14262150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 19112785 - 19112757
Alignment:
Q  4 ggacgaaaagaggtatttaccctattttc 32  Q
    |||||||||||||||||||||||||||||    
T  19112785 ggacgaaaagaggtatttaccctattttc 19112757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 33372760 - 33372788
Alignment:
Q  3 gggacgaaaagaggtatttaccctatttt 31  Q
    |||||||||||||||||||||||||||||    
T  33372760 gggacgaaaagaggtatttaccctatttt 33372788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 35741894 - 35741826
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||||| ||| ||||||||||||||| |||||||||| ||  || | ||| |||||||||||    
T  35741894 ttagattatgtccctgtcattttagattcttccgcttttagtccctcaattgaacacatcagcagaatc 35741826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 268
Target Start/End: Original strand, 4636 - 4798
Alignment:
Q  106 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctc 205  Q
    ||||||||| |||||||| ||||||||| |||||| |||| |||||| |||| |||| |||||||  |||||||||||||| |||||||||| |||||||    
T  4636 attttgtccctgtaatttgagattcttctacttttggtccctccttttatcaagtcaacagaatctgcataaattacgtccgtgtaatttcagattcctc 4735  T
Q  206 ccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  4736 ccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtaccatgt 4798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 4872 - 4804
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| |||||||||    
T  4872 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatc 4804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 24732007 - 24732173
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||| |||| || ||||  |||||||||||||| |||||||||| |||    
T  24732007 ttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaacataatctacataaattacgtccttgtaatttcagatt 24732106  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  24732107 cctcccacttttggtccctataatttcagattcctccacttttggtccctcattttacgtaccatgt 24732173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 30618031 - 30618196
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | ||| |||||||||| |||| |||||| |||||||||||||||||  ||||||||||||||||||||||||| |||    
T  30618031 ttagattttgtccctgtaatttcatattgttccacttttggtccctccttttatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 30618130  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
     |||||||||||| || ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  30618131 -ctcccacttttgatcactgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 30618196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 103 - 268
Target Start/End: Complemental strand, 2299617 - 2299453
Alignment:
Q  103 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattc 202  Q
    |||||||||||| |||||||| ||||||||||||||||  ||| ||||||||||| |||| |||||||  ||||||||||||||||||| ||||| ||||    
T  2299617 tagattttgtccctgtaatttcagattcttccactttttatccctcctttcatcaagtcaacagaatctgcataaattacgtccctgta-tttcagattc 2299519  T
Q  203 ctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||    
T  2299518 ctcccacttttggtccttgtaattttagattccgccacttttggtccctcattttacgtgccatgt 2299453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 9481251 - 9481417
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||| ||||| |||||||| | ||||||||| |||| |||| ||||||||||||||||||||||||  |||||||||||| |||||||||||| |||    
T  9481251 ttagattatgtccctgtaatttcatattcttccaattttggtccctcctttcatcacgtcagcagaatctgcataaattacgttcctgtaatttcagatt 9481350  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||| | |||||||||||||||||||| |||||| || |||| |||||||||||| ||||||||||    
T  9481351 cctcctagttttggtccctgtaatttcaaattcctccattttttgtccctcattttgcgtgccatgt 9481417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 102 - 258
Target Start/End: Complemental strand, 3230171 - 3230016
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||||| |||||| | |||||| ||||||| ||| | | ||||||||||||| |||||||  ||||||| |||||||||||||||||||||    
T  3230171 ttagattttgtccatataatttcatattctttcacttttggtcat-cttttcatcacgtcaacagaatctgcataaatcacgtccctgtaatttcatatt 3230073  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcatttta 258  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  3230072 cctcccacttttggtccttgtaatttcatattcctccacttttggtccctcatttta 3230016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 116 - 268
Target Start/End: Complemental strand, 30459196 - 30459044
Alignment:
Q  116 tgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttgg 215  Q
    |||||||| |||||||| ||||||| |||  |||||||||||||| |||| |||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  30459196 tgtaatttcagattctttcacttttggtctctcctttcatcacgttagcataatctccataaattacgtccctataatttcaaattcctcccacttttgg 30459097  T
Q  216 tccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||| ||||||||||||||  |||||||||| || ||||||||||||| |||||    
T  30459096 tccttgtaatttcagattatttcacttttgatctctcattttacgtgtcatgt 30459044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 110 - 268
Target Start/End: Complemental strand, 10322032 - 10321873
Alignment:
Q  110 tgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccac 209  Q
    ||||| |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||||    
T  10322032 tgtccctgtaatttcagattctttcacttttggtccttcctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagattcctcccac 10321933  T
Q  210 ttttggtccctgtaatttcagattccttc-acttttggtccctcattttacgtgccatgt 268  Q
    ||||||| | |||||||||||||| || | | |||| | |||| ||||||||||||||||    
T  10321932 ttttggttcatgtaatttcagattactccaatttttagccccttattttacgtgccatgt 10321873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 33637628 - 33637746
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||| | ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||  |||| |||||||||||||||||||| |||    
T  33637628 ttagattttgttcttgtaattttagattcttccacttttggtccctcctttcattacgtcagcagaatctgcatagattacgtccctgtaatttcagatt 33637727  T
Q  202 cctcccacttttggtccct 220  Q
    |||||||||||||||||||    
T  33637728 cctcccacttttggtccct 33637746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 180 - 268
Target Start/End: Complemental strand, 26385509 - 26385421
Alignment:
Q  180 tacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26385509 tacgtccctgtaatttcatattcctcccagttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgt 26385421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 33714734 - 33714630
Alignment:
Q  164 cagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgc 263  Q
    |||||||  |||||||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |    
T  33714734 cagaatctgcataaattacgtccttgtaatttcagattcctctcacttttggtctctgtaatttcagattcctccacttttggtccctcattttacgtac 33714635  T
Q  264 catgt 268  Q
    |||||    
T  33714634 catgt 33714630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 117 - 251
Target Start/End: Complemental strand, 18500641 - 18500506
Alignment:
Q  117 gtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggt 216  Q
    |||||||||||||||||||||||| |||| ||||||||||| | || |||||||  ||||||||| ||||||||||||||| || | | |||||||||||    
T  18500641 gtaattttagattcttccacttttggtccctcctttcatcaaggcaacagaatctgcataaattatgtccctgtaatttcagatcctttccacttttggt 18500542  T
Q  217 ccctgtaa-tttcagattccttcacttttggtccct 251  Q
    |||||||| ||| |||||||| ||||||||||||||    
T  18500541 ccctgtaatttttagattcctccacttttggtccct 18500506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 32017813 - 32017696
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |||||||||||||||||| ||||   |||||||||| |||||||||||||| |||    
T  32017813 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcggaatatgcataaattacatccctgtaatttcaaatt 32017714  T
Q  202 cctcccacttttggtccct 220  Q
    ||| |||||||||||||||    
T  32017713 cct-ccacttttggtccct 32017696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 17142875 - 17142798
Alignment:
Q  174 ataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccct 251  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  17142875 ataaattaggtccctgtaatttcagattcctctcacttttggtccctgtaatttcagattcctccacttttggtccct 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 14681191 - 14681025
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||| ||||||| || |||||||||||| ||||||||| |||| |  ||| |  ||||||| ||||||  || | |||||||||||||||||||| |||    
T  14681191 ttagactttgtccttgcaattttagattcctccacttttggtcccttatttaactacgtcagtagaatctgcacatattacgtccctgtaatttcagatt 14681092  T
Q  202 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
     ||| |||||||||||| | |||||||||||| || ||||||||||| ||| ||| ||||| |||||    
T  14681091 actctcacttttggtccatataatttcagatttctccacttttggtctctcttttcacgtgtcatgt 14681025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 18500520 - 18500457
Alignment:
Q  206 ccacttttggtccctgtaatttc-agattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||| |||||    
T  18500520 ccacttttggtccctgtaatttttagattcctccacttttggtccctcattttacgtgtcatgt 18500457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 14680951 - 14681019
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||  |||||||| | |||||||||||||| ||||||| ||||| |||||||||||||||    
T  14680951 ttagattttgtctttgtaatttcatattcttccacttttggtccttcatttcaccacgtcagcagaatc 14681019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 19284198 - 19284258
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtca 162  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||| ||||    
T  19284198 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcatgtca 19284258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 32017731 - 32017679
Alignment:
Q  216 tccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  32017731 tccctgtaatttcaaattcctccacttttggtccctcattttacgtgtcatgt 32017679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 9854196 - 9854128
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || ||||| |||||||||| ||||    
T  9854196 ttagattttgtccttgtaatttcatattcttccacttttggtccctcatttcaccacgtcagcaaaatc 9854128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 24732247 - 24732179
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||||||||||||||||| | |||||||||||||| |||| || || || ||||| |||||||||    
T  24732247 ttagattttgtccatgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatc 24732179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 26385347 - 26385415
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||||| |||||||||||||| |||| || || || ||||| |||||||||    
T  26385347 ttagattttgtccctgtaattttatattcttccacttttggtccctcattccaccacgtaagcagaatc 26385415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 30618270 - 30618202
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| ||||||||||||||||||||||||| |||  |  || || |||||||||||||||    
T  30618270 ttagattttgtccctgtaattttagattcttccactttttgtctcttattccaccacgtcagcagaatc 30618202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 33637709 - 33637757
Alignment:
Q  215 gtccctgtaatttcagattccttc-acttttggtccctcattttacgtg 262  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  33637709 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtg 33637757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 18500383 - 18500451
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| |||||||||    
T  18500383 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatc 18500451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 30458970 - 30459038
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||| ||||  |||||||| ||||||||| ||||||||||  || ||||| |||||||||||||||    
T  30458970 ttagattatgtcactgtaatttcagattcttcaacttttagtctctcatttcaccacgtcagcagaatc 30459038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 33714556 - 33714624
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| |||||||||    
T  33714556 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatc 33714624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 9481491 - 9481448
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtcc 145  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||    
T  9481491 ttagattttgtccttgtaatttcagattcttccacttttggtcc 9481448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 18500683 - 18500713
Alignment:
Q  1 cagggacgaaaagaggtatttaccctatttt 31  Q
    |||||||||||||||||||||||||||||||    
T  18500683 cagggacgaaaagaggtatttaccctatttt 18500713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 32017619 - 32017673
Alignment:
Q  116 tgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||| |||||||||||||||| ||||||  || || |||||||||||||||    
T  32017619 tgtaatttcagattcttccacttttggtcctttattccaccacgtcagcagaatc 32017673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 19284207 - 19284244
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctc 252  Q
    |||||||||||||||||||| | |||||||||||||||    
T  19284207 gtccctgtaatttcagattcttccacttttggtccctc 19284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 18500392 - 18500432
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  18500392 gtccctgtaatttcatattcttccacttttggtccctcatt 18500432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 33637828 - 33637788
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  33637828 gtccctgtaatttcatattctttcacttttgatccctcatt 33637788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 116 - 269
Target Start/End: Complemental strand, 4164 - 4011
Alignment:
Q  116 tgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttgg 215  Q
    |||||||| |||||||| || |||| |||| ||||||||||||||||||||||||  ||||||||| ||| ||||||||||| |||||||||||||||||    
T  4164 tgtaatttcagattctttcatttttggtccctcctttcatcacgtcagcagaatctgcataaattatgtctctgtaatttcagattcctcccacttttgg 4065  T
Q  216 tccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgtg 269  Q
    || ||||||||||| |||||| |||||||||||||||||||||| |||||||||    
T  4064 tcactgtaatttcatattcctccacttttggtccctcattttacttgccatgtg 4011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 268
Target Start/End: Original strand, 8415 - 8557
Alignment:
Q  125 agattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaa 224  Q
    |||||||| ||||||| |||  |||||||||||||||| || ||||  ||| ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  8415 agattctttcacttttggtctctcctttcatcacgtcaacaaaatctgcatcaattacgtccctgtaatttcagattcctcccacttttggtccttgtaa 8514  T
Q  225 tttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    |||||||||||| || ||||||| |||||||||||||| |||||    
T  8515 tttcagattcctccatttttggt-cctcattttacgtgtcatgt 8557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 8631 - 8563
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| || || || |||||||||||||||    
T  8631 ttagattttgtccctgtaattttagattcttccacttttggtccctcattccaccacgtcagcagaatc 8563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 8622 - 8582
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||| |||||| | ||||||||||||||||||    
T  8622 gtccctgtaattttagattcttccacttttggtccctcatt 8582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 268
Target Start/End: Complemental strand, 513 - 363
Alignment:
Q  117 gtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggt 216  Q
    ||||||| ||||| |||||||||| ||   |||||| ||||| |||||||||||  |||||||||||||  |||||||||| |||||||||  |||||||    
T  513 gtaatttcagattattccacttttggtatctcctttaatcacatcagcagaatctgcataaattacgtct-tgtaatttcagattcctcccgattttggt 415  T
Q  217 ccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  414 ccctgtaatttcagattcctctacttttggtccctcattttacgtaccatgt 363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 15939 - 15808
Alignment:
Q  104 agattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcc 203  Q
    ||||||||||| |||||||| | |||||| ||||||| |||  ||||||||||||||||||||||||  |||||||||   | ||||||||||| |||||    
T  15939 agattttgtccctgtaatttcatattctttcacttttggtctctcctttcatcacgtcagcagaatctgcataaatta-tacgctgtaatttcagattcc 15841  T
Q  204 tcccacttttggtccctgtaatttcagattcct 236  Q
    |||||||||||||| ||||||||||| ||||||    
T  15840 tcccacttttggtctctgtaatttcaaattcct 15808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 7508 - 7390
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 201  Q
    ||||||||||||| |||||||| ||||||||| |||||| |||  ||||||||||| |||| || ||||  |||||||||| ||| |||||||||| |||    
T  7508 ttagattttgtccctgtaatttcagattcttctacttttggtctatcctttcatcaagtcaacaaaatctgcataaattacatccttgtaatttcagatt 7409  T
Q  202 cctcccacttttggtccct 220  Q
    ||| |||||||||||||||    
T  7408 cctaccacttttggtccct 7390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 7422 - 7373
Alignment:
Q  220 tgtaatttcagattccttc-acttttggtccctcattttacgtgccatgt 268  Q
    ||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  7422 tgtaatttcagattcctaccacttttggtccctcattttacgtaccatgt 7373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 12291 - 12223
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||||||||||    
T  12291 ttagattttgtccctgtaatttcagattcttccacttttggtccatcctttcatcacgtcagcagaatc 12223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 34144 - 34200
Alignment:
Q  26 tattttcttttgtactaactattggtagtttgtagcacagcacaacttcacaatttc 82  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  34144 tattttcttttgtagtaactattggtagtttgtagcacagcacaacttcacactttc 34200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 37; Significance: 0.000000000007; HSPs: 4)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 5057 - 4989
Alignment:
Q  102 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 170  Q
    |||||||| |||| ||||||||||||||||||||||||| |||| || || || ||||| |||||||||    
T  5057 ttagatttagtccctgtaattttagattcttccacttttggtccctcattccaccacgtaagcagaatc 4989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 4924 - 4983
Alignment:
Q  210 ttttggtccctgtaatttcagattccttc-acttttggtccctcattttacgtgccatgt 268  Q
    |||| |||| |||||||||| ||| || | ||||||||||||||||||||||||||||||    
T  4924 ttttagtccatgtaatttcatatttctcccacttttggtccctcattttacgtgccatgt 4983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 4929 - 4966
Alignment:
Q  183 gtccctgtaatttcatattcctcccacttttggtccct 220  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  4929 gtccatgtaatttcatatttctcccacttttggtccct 4966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 5048 - 5008
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctcatt 255  Q
    ||||||||||||| |||||| | ||||||||||||||||||    
T  5048 gtccctgtaattttagattcttccacttttggtccctcatt 5008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 4745 - 4781
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccct 251  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4745 gtccctgtaatttcagattcctccacttttggtccct 4781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 5978 - 5941
Alignment:
Q  215 gtccctgtaatttcagattccttcacttttggtccctc 252  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  5978 gtccctgtaatttcagattcctccacttttgatccctc 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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