View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0438_2D_low_44 (Length: 254)

Name: NF0438_2D_low_44
Description: NF0438_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0438_2D_low_44
NF0438_2D_low_44
[»] chr2 (56 HSPs)
chr2 (69-234)||(23806022-23806187)
chr2 (68-234)||(23854809-23854975)
chr2 (2-234)||(26560697-26560932)
chr2 (70-234)||(22263334-22263498)
chr2 (68-234)||(15106136-15106302)
chr2 (82-228)||(39878185-39878331)
chr2 (1-234)||(42670862-42671097)
chr2 (12-234)||(26135828-26136052)
chr2 (68-234)||(17463160-17463326)
chr2 (1-234)||(17850729-17850964)
chr2 (1-234)||(19251471-19251705)
chr2 (69-234)||(13284551-13284716)
chr2 (68-234)||(20498815-20498980)
chr2 (68-222)||(33290118-33290272)
chr2 (72-186)||(26236200-26236313)
chr2 (1-136)||(15106308-15106443)
chr2 (181-234)||(26236277-26236330)
chr2 (181-234)||(30390602-30390655)
chr2 (1-136)||(17850587-17850723)
chr2 (1-136)||(19251711-19251847)
chr2 (68-136)||(20498986-20499054)
chr2 (1-136)||(34548574-34548710)
chr2 (1-42)||(23855031-23855072)
chr2 (1-136)||(26560556-26560691)
chr2 (68-128)||(13254566-13254626)
chr2 (68-111)||(21482146-21482189)
chr2 (1-40)||(26236433-26236472)
chr2 (176-222)||(39878361-39878407)
chr2 (1-42)||(17463428-17463469)
chr2 (181-222)||(20499004-20499045)
chr2 (1-42)||(22263530-22263571)
chr2 (181-218)||(26236205-26236242)
chr2 (68-136)||(22263260-22263328)
chr2 (68-136)||(26236336-26236404)
chr2 (68-131)||(23806198-23806261)
chr2 (1-40)||(23806291-23806330)
chr2 (1-40)||(23854688-23854727)
chr2 (184-222)||(13254695-13254733)
chr2 (4-42)||(13254773-13254811)
chr2 (68-114)||(23046776-23046822)
chr2 (68-114)||(44098885-44098931)
chr2 (75-136)||(13284484-13284545)
chr2 (1-42)||(23046707-23046748)
chr2 (1-42)||(23047919-23047960)
chr2 (1-42)||(42670717-42670758)
chr2 (68-136)||(12418964-12419032)
chr2 (68-136)||(12431024-12431092)
chr2 (181-221)||(15106327-15106367)
chr2 (181-221)||(23806212-23806252)
chr2 (1-33)||(26136163-26136195)
chr2 (1-41)||(26236127-26236167)
chr2 (181-221)||(26236355-26236395)
chr2 (181-217)||(26560632-26560668)
chr2 (68-136)||(30390528-30390596)
chr2 (181-221)||(30390537-30390577)
chr2 (1-41)||(44098960-44099000)
[»] chr5 (56 HSPs)
chr5 (68-234)||(7126060-7126226)
chr5 (69-234)||(24650843-24651007)
chr5 (1-234)||(14143902-14144136)
chr5 (68-234)||(20709355-20709521)
chr5 (1-234)||(17762283-17762517)
chr5 (1-234)||(24837312-24837547)
chr5 (68-234)||(31799783-31799949)
chr5 (2-234)||(41001496-41001729)
chr5 (68-234)||(993890-994055)
chr5 (68-234)||(4919133-4919299)
chr5 (68-234)||(29444875-29445041)
chr5 (68-234)||(6817265-6817430)
chr5 (68-232)||(24074372-24074535)
chr5 (1-186)||(14411697-14411884)
chr5 (68-186)||(27159148-27159266)
chr5 (1-234)||(18336467-18336691)
chr5 (138-234)||(23979041-23979136)
chr5 (68-227)||(22571227-22571386)
chr5 (1-136)||(6817123-6817259)
chr5 (1-136)||(23979142-23979279)
chr5 (1-111)||(31799640-31799752)
chr5 (181-234)||(14411847-14411901)
chr5 (6-136)||(7125923-7126054)
chr5 (68-136)||(20709281-20709349)
chr5 (1-136)||(24837169-24837306)
chr5 (1-40)||(30512288-30512327)
chr5 (1-40)||(30552628-30552667)
chr5 (181-230)||(27159135-27159185)
chr5 (1-42)||(7126254-7126295)
chr5 (1-42)||(24651036-24651077)
chr5 (68-136)||(14411907-14411975)
chr5 (1-41)||(17762620-17762660)
chr5 (68-136)||(24074543-24074611)
chr5 (177-221)||(30512361-30512405)
chr5 (177-221)||(30552701-30552745)
chr5 (68-136)||(41001422-41001490)
chr5 (2-136)||(993751-993884)
chr5 (68-135)||(4919059-4919126)
chr5 (1-40)||(24074303-24074342)
chr5 (68-111)||(29445072-29445115)
chr5 (1-106)||(18336727-18336833)
chr5 (3-33)||(24650704-24650734)
chr5 (1-43)||(29445141-29445183)
chr5 (181-222)||(6817200-6817241)
chr5 (181-222)||(20709290-20709331)
chr5 (186-227)||(20947056-20947097)
chr5 (181-222)||(23979160-23979201)
chr5 (5-42)||(31799976-31800013)
chr5 (181-221)||(4919068-4919108)
chr5 (2-42)||(4919326-4919366)
chr5 (68-136)||(14144142-14144210)
chr5 (1-57)||(14144223-14144279)
chr5 (72-136)||(27159063-27159127)
chr5 (181-217)||(27159068-27159104)
chr5 (181-217)||(31799718-31799754)
chr5 (68-136)||(41424585-41424653)
[»] chr3 (67 HSPs)
chr3 (1-234)||(30500184-30500418)
chr3 (1-234)||(14262179-14262414)
chr3 (1-234)||(45969915-45970150)
chr3 (1-234)||(14171729-14171964)
chr3 (1-234)||(16721991-16722226)
chr3 (68-234)||(14161940-14162106)
chr3 (1-227)||(9267125-9267352)
chr3 (69-234)||(21632966-21633131)
chr3 (1-234)||(19112908-19113143)
chr3 (68-234)||(45003565-45003731)
chr3 (68-234)||(52552835-52552997)
chr3 (1-228)||(15328463-15328689)
chr3 (68-234)||(5800674-5800840)
chr3 (68-234)||(20853839-20854005)
chr3 (72-234)||(17465511-17465672)
chr3 (68-228)||(43572458-43572620)
chr3 (68-228)||(33372475-33372635)
chr3 (1-234)||(49986527-49986763)
chr3 (1-234)||(35995821-35996053)
chr3 (68-234)||(38283619-38283785)
chr3 (68-234)||(47575415-47575581)
chr3 (68-210)||(11003801-11003943)
chr3 (86-234)||(4204851-4204999)
chr3 (68-163)||(17649224-17649319)
chr3 (1-136)||(4204709-4204845)
chr3 (1-136)||(9266975-9267112)
chr3 (1-136)||(35995678-35995815)
chr3 (68-136)||(43572632-43572700)
chr3 (1-40)||(45970255-45970294)
chr3 (1-136)||(30500043-30500178)
chr3 (1-57)||(16722313-16722369)
chr3 (68-136)||(38283791-38283859)
chr3 (1-40)||(20853695-20853734)
chr3 (1-40)||(21632901-21632940)
chr3 (68-111)||(35740884-35740927)
chr3 (68-111)||(36990926-36990969)
chr3 (68-111)||(37016366-37016409)
chr3 (1-43)||(14161871-14161913)
chr3 (1-47)||(14171587-14171633)
chr3 (181-222)||(4204786-4204827)
chr3 (1-42)||(5800941-5800982)
chr3 (1-111)||(14162137-14162248)
chr3 (1-42)||(19112764-19112805)
chr3 (1-42)||(19720333-19720374)
chr3 (1-42)||(27946202-27946243)
chr3 (181-222)||(43572650-43572691)
chr3 (1-33)||(5800605-5800637)
chr3 (68-136)||(14171655-14171723)
chr3 (68-136)||(14262105-14262173)
chr3 (68-136)||(15328701-15328769)
chr3 (68-136)||(21633137-21633205)
chr3 (181-221)||(21633156-21633196)
chr3 (1-41)||(33372406-33372446)
chr3 (181-221)||(35995756-35995796)
chr3 (1-40)||(17465706-17465745)
chr3 (68-135)||(32998376-32998443)
chr3 (1-40)||(33372743-33372782)
chr3 (1-40)||(49986867-49986906)
chr3 (6-40)||(27946114-27946148)
chr3 (68-106)||(33372675-33372713)
chr3 (1-136)||(35741826-35741962)
chr3 (68-106)||(52552761-52552799)
chr3 (1-42)||(14262036-14262077)
chr3 (1-42)||(24490256-24490297)
chr3 (181-218)||(32998397-32998434)
chr3 (181-221)||(9267053-9267093)
chr3 (181-217)||(14262114-14262150)
[»] chr8 (50 HSPs)
chr8 (1-234)||(10108370-10108605)
chr8 (68-234)||(17623030-17623196)
chr8 (1-234)||(30789650-30789885)
chr8 (1-228)||(21148086-21148314)
chr8 (1-232)||(5554869-5555102)
chr8 (68-234)||(2583389-2583555)
chr8 (68-233)||(42605822-42605987)
chr8 (1-228)||(14767656-14767882)
chr8 (1-234)||(26136685-26136920)
chr8 (68-234)||(22494454-22494619)
chr8 (74-234)||(7689598-7689758)
chr8 (73-234)||(43851807-43851968)
chr8 (1-226)||(14820295-14820521)
chr8 (68-234)||(42113127-42113293)
chr8 (72-234)||(43481457-43481619)
chr8 (140-234)||(26532926-26533020)
chr8 (1-136)||(17622890-17623024)
chr8 (1-136)||(26136926-26137062)
chr8 (68-161)||(21144721-21144814)
chr8 (1-136)||(10171384-10171521)
chr8 (9-136)||(42112993-42113121)
chr8 (1-136)||(43851665-43851801)
chr8 (1-136)||(7689764-7689901)
chr8 (1-42)||(18044164-18044205)
chr8 (68-136)||(21148006-21148074)
chr8 (1-40)||(7689524-7689563)
chr8 (181-222)||(42113062-42113103)
chr8 (1-136)||(10108611-10108748)
chr8 (181-221)||(10171403-10171443)
chr8 (68-136)||(14767576-14767644)
chr8 (1-136)||(14820535-14820672)
chr8 (181-221)||(26136945-26136985)
chr8 (68-111)||(40486697-40486740)
chr8 (181-211)||(35368684-35368714)
chr8 (86-136)||(40487656-40487706)
chr8 (1-42)||(21147936-21147977)
chr8 (155-232)||(22848464-22848540)
chr8 (12-57)||(30789519-30789564)
chr8 (185-222)||(30789589-30789626)
chr8 (1-42)||(35367410-35367451)
chr8 (68-105)||(38726756-38726793)
chr8 (1-42)||(43481652-43481693)
chr8 (181-221)||(7689783-7689823)
chr8 (181-217)||(21148015-21148051)
chr8 (181-221)||(22494644-22494684)
chr8 (5-41)||(22494721-22494757)
chr8 (68-136)||(26532852-26532920)
chr8 (1-33)||(42113327-42113359)
chr8 (1-41)||(42606091-42606131)
chr8 (181-221)||(43851742-43851782)
[»] chr7 (62 HSPs)
chr7 (1-234)||(41600101-41600336)
chr7 (1-234)||(12006683-12006918)
chr7 (1-234)||(23704662-23704896)
chr7 (1-220)||(28218320-28218541)
chr7 (1-234)||(20963638-20963871)
chr7 (68-234)||(20419679-20419845)
chr7 (1-234)||(20458834-20459068)
chr7 (1-234)||(23383643-23383878)
chr7 (68-234)||(38879867-38880033)
chr7 (1-234)||(48672422-48672657)
chr7 (68-234)||(10409443-10409609)
chr7 (68-234)||(31851382-31851548)
chr7 (70-233)||(7658114-7658276)
chr7 (68-222)||(6465923-6466077)
chr7 (70-234)||(44816978-44817142)
chr7 (68-234)||(1250349-1250515)
chr7 (115-234)||(33162651-33162770)
chr7 (1-186)||(25772523-25772709)
chr7 (68-186)||(48648421-48648538)
chr7 (149-222)||(24194941-24195014)
chr7 (1-136)||(12006541-12006677)
chr7 (1-136)||(28218178-28218316)
chr7 (1-136)||(38879723-38879861)
chr7 (181-234)||(25772506-25772559)
chr7 (181-234)||(48648404-48648457)
chr7 (68-136)||(7658040-7658108)
chr7 (1-40)||(48672277-48672316)
chr7 (1-136)||(10409615-10409751)
chr7 (1-136)||(23704902-23705038)
chr7 (68-136)||(16995268-16995336)
chr7 (68-136)||(24195037-24195105)
chr7 (1-41)||(24195210-24195250)
chr7 (1-40)||(25772364-25772403)
chr7 (82-136)||(33162776-33162830)
chr7 (1-42)||(20419536-20419577)
chr7 (1-111)||(20963494-20963607)
chr7 (1-42)||(23383499-23383540)
chr7 (1-42)||(38880058-38880099)
chr7 (71-136)||(44816907-44816972)
chr7 (68-136)||(20458760-20458828)
chr7 (181-221)||(28218257-28218297)
chr7 (181-221)||(44816913-44816953)
chr7 (2-33)||(7658311-7658342)
chr7 (1-40)||(16995200-16995239)
chr7 (1-40)||(33162875-33162914)
chr7 (1-40)||(41599958-41599997)
chr7 (2-40)||(31851242-31851280)
chr7 (1-42)||(20419874-20419915)
chr7 (72-136)||(1250279-1250343)
chr7 (4-40)||(7657972-7658008)
chr7 (181-221)||(12006618-12006658)
chr7 (181-221)||(16995277-16995317)
chr7 (68-136)||(20419605-20419673)
chr7 (185-221)||(20458773-20458809)
chr7 (181-221)||(20963573-20963613)
chr7 (181-221)||(23704921-23704961)
chr7 (68-136)||(25772432-25772500)
chr7 (1-33)||(31852176-31852208)
chr7 (181-221)||(38879802-38879842)
chr7 (68-136)||(41600027-41600095)
chr7 (181-221)||(48648339-48648379)
chr7 (68-136)||(48672348-48672416)
[»] chr1 (61 HSPs)
chr1 (4-234)||(17606307-17606543)
chr1 (68-234)||(39711141-39711307)
chr1 (1-234)||(24467629-24467862)
chr1 (71-234)||(33628833-33628996)
chr1 (1-234)||(4907105-4907340)
chr1 (68-234)||(43539416-43539582)
chr1 (68-234)||(30299300-30299466)
chr1 (68-234)||(48072030-48072196)
chr1 (68-234)||(39970789-39970954)
chr1 (84-234)||(42510157-42510307)
chr1 (77-234)||(20995747-20995903)
chr1 (1-234)||(18462286-18462519)
chr1 (1-229)||(29696565-29696793)
chr1 (1-234)||(39826193-39826424)
chr1 (68-234)||(52058154-52058317)
chr1 (70-234)||(13229803-13229966)
chr1 (68-234)||(8292873-8293042)
chr1 (68-186)||(34749297-34749414)
chr1 (167-234)||(7473935-7474002)
chr1 (68-186)||(16294138-16294256)
chr1 (1-136)||(4906962-4907099)
chr1 (1-111)||(17606574-17606684)
chr1 (182-234)||(34749280-34749332)
chr1 (140-228)||(215061-215149)
chr1 (68-136)||(24467868-24467936)
chr1 (68-136)||(29696799-29696867)
chr1 (68-136)||(42510083-42510151)
chr1 (68-136)||(30299472-30299540)
chr1 (1-41)||(33628690-33628730)
chr1 (1-41)||(39711410-39711450)
chr1 (68-136)||(39970715-39970783)
chr1 (1-40)||(52058347-52058386)
chr1 (93-171)||(30780270-30780348)
chr1 (181-222)||(24467886-24467927)
chr1 (1-34)||(30299232-30299265)
chr1 (1-42)||(48072298-48072339)
chr1 (181-222)||(52058089-52058130)
chr1 (1-135)||(18342261-18342395)
chr1 (68-136)||(18462525-18462593)
chr1 (181-221)||(33628768-33628808)
chr1 (68-136)||(39826119-39826187)
chr1 (76-136)||(52058088-52058148)
chr1 (1-47)||(39970645-39970691)
chr1 (181-218)||(17501993-17502030)
chr1 (1-42)||(20995698-20995739)
chr1 (1-42)||(27039638-27039679)
chr1 (1-42)||(33629027-33629068)
chr1 (1-42)||(52058011-52058052)
chr1 (181-221)||(4907040-4907080)
chr1 (68-136)||(8293048-8293116)
chr1 (181-221)||(8293067-8293107)
chr1 (1-33)||(8293154-8293186)
chr1 (68-136)||(17501971-17502039)
chr1 (68-136)||(20995909-20995977)
chr1 (181-221)||(29696818-29696858)
chr1 (181-221)||(30299491-30299531)
chr1 (1-41)||(34749138-34749178)
chr1 (1-57)||(39826050-39826106)
chr1 (181-221)||(39826128-39826168)
chr1 (1-33)||(39970992-39971024)
chr1 (68-136)||(48072202-48072270)
[»] scaffold0809 (3 HSPs)
scaffold0809 (68-234)||(1479-1645)
scaffold0809 (1-42)||(1743-1784)
scaffold0809 (68-136)||(1651-1719)
[»] chr4 (67 HSPs)
chr4 (1-234)||(46046567-46046801)
chr4 (1-234)||(37012850-37013084)
chr4 (4-234)||(9396702-9396934)
chr4 (68-234)||(3018081-3018247)
chr4 (68-234)||(34064125-34064291)
chr4 (68-227)||(9516760-9516919)
chr4 (68-231)||(9619049-9619211)
chr4 (68-234)||(7819083-7819249)
chr4 (68-234)||(15640784-15640950)
chr4 (1-234)||(31090204-31090439)
chr4 (68-234)||(38574111-38574277)
chr4 (68-234)||(4355950-4356116)
chr4 (1-234)||(3273621-3273855)
chr4 (68-231)||(31944019-31944182)
chr4 (68-234)||(48580009-48580175)
chr4 (97-234)||(18667387-18667524)
chr4 (68-227)||(18713029-18713188)
chr4 (68-234)||(13132084-13132250)
chr4 (68-186)||(26252337-26252455)
chr4 (2-186)||(35376164-35376346)
chr4 (149-234)||(48259901-48259986)
chr4 (1-163)||(41947070-41947232)
chr4 (1-136)||(38573969-38574105)
chr4 (181-234)||(26252418-26252472)
chr4 (1-42)||(41946965-41947006)
chr4 (6-136)||(37012712-37012844)
chr4 (1-136)||(9396940-9397076)
chr4 (1-42)||(31218318-31218359)
chr4 (1-136)||(9619220-9619357)
chr4 (68-136)||(13132010-13132078)
chr4 (2-42)||(15641053-15641093)
chr4 (68-136)||(31944191-31944259)
chr4 (1-57)||(46046430-46046486)
chr4 (69-136)||(7819255-7819322)
chr4 (68-135)||(15640957-15641024)
chr4 (4-42)||(3018014-3018052)
chr4 (1-43)||(18667626-18667668)
chr4 (1-43)||(26252573-26252615)
chr4 (1-47)||(50462728-50462774)
chr4 (1-135)||(31090060-31090197)
chr4 (1-42)||(48259823-48259864)
chr4 (68-136)||(3273861-3273929)
chr4 (2-42)||(9516611-9516651)
chr4 (68-136)||(9516679-9516747)
chr4 (6-42)||(48580203-48580239)
chr4 (1-40)||(9516949-9516988)
chr4 (1-40)||(13132278-13132317)
chr4 (2-136)||(34063983-34064119)
chr4 (4-136)||(35376369-35376502)
chr4 (9-42)||(15640724-15640757)
chr4 (181-222)||(15640974-15641015)
chr4 (181-218)||(26252346-26252383)
chr4 (1-42)||(31943950-31943990)
chr4 (181-218)||(36888943-36888980)
chr4 (4-41)||(38574306-38574343)
chr4 (181-218)||(43312287-43312324)
chr4 (3-40)||(48260089-48260126)
chr4 (182-222)||(3273879-3273919)
chr4 (181-221)||(7819274-7819314)
chr4 (68-136)||(18713201-18713269)
chr4 (181-221)||(31090139-31090179)
chr4 (185-221)||(34064064-34064100)
chr4 (181-221)||(35376388-35376428)
chr4 (68-136)||(36888921-36888989)
chr4 (181-217)||(37012785-37012821)
chr4 (181-221)||(38574046-38574086)
chr4 (68-136)||(48259992-48260060)
[»] scaffold0361 (2 HSPs)
scaffold0361 (1-234)||(4562-4798)
scaffold0361 (1-136)||(4804-4940)
[»] chr6 (38 HSPs)
chr6 (1-234)||(30617967-30618196)
chr6 (1-234)||(24731935-24732173)
chr6 (1-234)||(9481182-9481417)
chr6 (69-234)||(2299453-2299617)
chr6 (68-224)||(3230016-3230171)
chr6 (4-234)||(26385421-26385649)
chr6 (82-234)||(30459044-30459196)
chr6 (76-234)||(10321873-10322032)
chr6 (68-186)||(33637628-33637746)
chr6 (1-186)||(32017696-32017881)
chr6 (130-234)||(33714630-33714734)
chr6 (83-217)||(18500506-18500641)
chr6 (140-217)||(17142798-17142875)
chr6 (68-234)||(14681025-14681191)
chr6 (1-136)||(24732179-24732315)
chr6 (172-234)||(18500457-18500520)
chr6 (68-136)||(14680951-14681019)
chr6 (68-128)||(19284198-19284258)
chr6 (182-234)||(32017679-32017731)
chr6 (68-136)||(9854128-9854196)
chr6 (68-136)||(26385347-26385415)
chr6 (68-136)||(30618202-30618270)
chr6 (181-228)||(33637709-33637757)
chr6 (1-40)||(18500668-18500707)
chr6 (1-136)||(18500315-18500451)
chr6 (1-41)||(26385278-26385318)
chr6 (4-40)||(30458903-30458939)
chr6 (68-136)||(30458970-30459038)
chr6 (68-136)||(33714556-33714624)
chr6 (68-111)||(9481448-9481491)
chr6 (82-136)||(32017619-32017673)
chr6 (2-40)||(34884558-34884596)
chr6 (1-42)||(2299650-2299691)
chr6 (5-42)||(10321737-10321774)
chr6 (2-43)||(19284130-19284171)
chr6 (181-218)||(19284207-19284244)
chr6 (181-221)||(18500392-18500432)
chr6 (181-221)||(33637788-33637828)
[»] scaffold0185 (2 HSPs)
scaffold0185 (82-235)||(4011-4164)
scaffold0185 (1-42)||(3869-3910)
[»] scaffold0141 (4 HSPs)
scaffold0141 (91-234)||(8415-8557)
scaffold0141 (68-136)||(8563-8631)
scaffold0141 (1-40)||(8325-8364)
scaffold0141 (181-221)||(8582-8622)
[»] scaffold0881 (1 HSPs)
scaffold0881 (83-234)||(363-513)
[»] scaffold0176 (2 HSPs)
scaffold0176 (70-202)||(15808-15939)
scaffold0176 (1-42)||(15965-16006)
[»] scaffold0449 (3 HSPs)
scaffold0449 (1-186)||(7390-7578)
scaffold0449 (186-234)||(7373-7422)
scaffold0449 (2-41)||(7227-7266)
[»] scaffold0117 (2 HSPs)
scaffold0117 (68-136)||(12223-12291)
scaffold0117 (6-42)||(12319-12355)
[»] scaffold0477 (4 HSPs)
scaffold0477 (68-136)||(4989-5057)
scaffold0477 (176-234)||(4924-4983)
scaffold0477 (149-186)||(4929-4966)
scaffold0477 (181-221)||(5008-5048)
[»] scaffold0352 (4 HSPs)
scaffold0352 (181-217)||(4745-4781)
scaffold0352 (1-57)||(6001-6057)
scaffold0352 (1-43)||(4667-4709)
scaffold0352 (181-218)||(5941-5978)


Alignment Details
Target: chr2 (Bit Score: 134; Significance: 7e-70; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 234
Target Start/End: Original strand, 23806022 - 23806187
Alignment:
Q  69 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattc 168  Q
    ||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  23806022 tagattttgcccctgtaattttagattcttccacttttggtccctcctttcatcacgtcagcagaatccgcataaattacgtccctgtaatttcagattc 23806121  T
Q  169 ctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  23806122 ctcccacttttggtccctataatttcagattcctccacttttggtccctcattttacgtgccatgt 23806187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 23854975 - 23854809
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||  |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  23854975 ttagattttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 23854876  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  23854875 cctcccacttttgatccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 23854809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 26560932 - 26560697
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn---ttagattttgtccatgtaattttagattctt 98  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||| || ||| ||             ||||||||||||||| |||||| | ||||||    
T  26560932 ggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtcccggtaaaaaaaaaaaaattagattttgtccatataatttcatattctt 26560833  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||  ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||    
T  26560832 ccacttttggtctctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccacttttgatccctgtaatttcaaat 26560733  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||| ||||||||||||||||||||||    
T  26560732 tcctccacttttgatccctcattttacgtgccatgt 26560697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 70 - 234
Target Start/End: Complemental strand, 22263498 - 22263334
Alignment:
Q  70 agattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcc 169  Q
    ||||||||||| |||||||| | |||||||||||||| |||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||    
T  22263498 agattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcataatctgcataaattacgtccctgtaatttcagattcc 22263399  T
Q  170 tcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||| | |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  22263398 tcctagttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 22263334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 15106136 - 15106302
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| ||||||||||||||||||  ||||  ||| ||||| |||| |||||||||| |||    
T  15106136 ttagattttgtccctgtaattttagattattccacttttggtccctcctttcatcacgtcagctaaatctgcatcaattaagtccttgtaatttcagatt 15106235  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  15106236 cctcccacttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgt 15106302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 82 - 228
Target Start/End: Original strand, 39878185 - 39878331
Alignment:
Q  82 tgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttgg 181  Q
    |||||||| |||||||||||||||| |||  ||||||||||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||    
T  39878185 tgtaatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccctgtaatttcatattcctcccacttttgg 39878284  T
Q  182 tccctgtaatttcagattccttcacttttggtccctcattttacgtg 228  Q
    ||||| |||||||||||| || |||||||||||||||||||||||||    
T  39878285 tccctctaatttcagattactccacttttggtccctcattttacgtg 39878331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 42671097 - 42670862
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    ||||||||||||||||| ||||||||| |||||| ||||| || ||| || ||||||            ||||||| ||||| |||||||| | ||| ||    
T  42671097 gggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattttt 42670998  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||| ||||||||||||||||||||||||  |||||||||||| |||||||||||| |||||||| | |||||||||||||||||||| ||    
T  42670997 ccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgttcctgtaatttcagattcctcctagttttggtccctgtaatttcaaat 42670898  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| || ||||||||||||||||||||||||||||    
T  42670897 tcctccatttttggtccctcattttacgtgccatgt 42670862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 26135828 - 26136052
Alignment:
Q  12 tcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattcttccacttttagt 109  Q
    ||||||||||||||||||||||| ||||||| |||| || ||||||            ||||||||||||| |||||||| ||||||||| |||||| ||    
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggt 26135927  T
Q  110 ccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttt 209  Q
    || ||||||||||| |||| |||||||  |||||||||||||| |||||||||| ||||||| |||||||||||| |||||||| |||||||| ||||||    
T  26135928 ccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctctcacttttggtccttgtaattttagattcctccacttt 26136027  T
Q  210 tggtccctcattttacgtgccatgt 234  Q
    |||||||| ||||||||| ||||||    
T  26136028 tggtcccttattttacgtaccatgt 26136052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 17463160 - 17463326
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| || |||| |||||||| |||| || |||||||| |||| |||||||  ||||||||||||||||||||||||| |||    
T  17463160 ttagattttgtccctgtaatttcaggttctcccacttttggtccctcatttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagatt 17463259  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||||||||||||| ||||||||  | ||||||||||||||||||| ||||||||    
T  17463260 cctcccacttttggtccctgtaattttagattcctctaattttggtccctcattttacatgccatgt 17463326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 17850964 - 17850729
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| ||||| |  ||| || | ||||            ||||||||||||| |||||||| ||||||||    
T  17850964 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattctt 17850865  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||| || |||||||||||||||| ||||  ||| |||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||    
T  17850864 ccacttttggtccctcttttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttggttcctttaatttcagat 17850765  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||| |||||||||||| || ||||||    
T  17850764 tcctccacttttgatccctcattttaggtaccatgt 17850729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 19251471 - 19251705
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||| ||||||||||||||||||||||||||||| ||||| |  ||| || ||||||          || ||||||||||| |||||||| | |||||||    
T  19251471 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 19251570  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagatt 199  Q
    ||||||| |||| |||||||||||| ||||||||||   ||||||||| || | |||||||||| |||||||| ||||||| |||||||||||||| |||    
T  19251571 cacttttggtccctcctttcatcacatcagcagaatatacataaattatgttcttgtaatttcaaattcctccaacttttgatccctgtaatttcatatt 19251670  T
Q  200 ccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||| |||||||||||| ||||||||||||||||||    
T  19251671 cctccacttttggtccatcattttacgtgccatgt 19251705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 69 - 234
Target Start/End: Complemental strand, 13284716 - 13284551
Alignment:
Q  69 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattc 168  Q
    |||||||||||| |||||||| |||||| ||||||||| |||| || ||| | ||||||| |||||||  |||||||||||||| |||||||| | ||||    
T  13284716 tagattttgtccttgtaatttcagattcctccacttttggtccctcatttaaccacgtcaacagaatctacataaattacgtccttgtaatttaagattc 13284617  T
Q  169 ctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||||    
T  13284616 ctcccacttttggtccctgtaatttcatatttcttcacttttggtccctcatttcacgtgtcatgt 13284551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 20498815 - 20498980
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||| ||||| |||| ||| |||||||||||||||| |||| |||||| |||||||||| ||||||  |||||||||||||  | ||||||||||||    
T  20498815 ttagattatgtccctgta-tttcagattcttccacttttggtccctccttttatcacgtcagtagaatctgcataaattacgtcaatataatttcatatt 20498913  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||||||||||||||||||  || |||||||| ||||||||||||||||| ||||    
T  20498914 cctcccacttttggtccctgtaatttcagatcactccacttttgatccctcattttacgtgctatgt 20498980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 33290118 - 33290272
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||| ||||| |||||||| | | || ||||||||| |||| |  ||| | |||||||||||||||  |||||||| |||||||||||||||| |||    
T  33290118 ttagattctgtccttgtaatttcatactcctccacttttggtcccttatttaaccacgtcagcagaatctgcataaatttcgtccctgtaatttcagatt 33290217  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  33290218 cctcccccttttggtccctgtaatttcagatacctccacttttggtccctcattt 33290272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 26236200 - 26236313
Alignment:
Q  72 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctc 171  Q
    ||||||||| |||||||| |||||||| ||||||| |||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||     
T  26236200 attttgtccctgtaatttcagattctttcacttttggtccctcctttcatcacgtcagcagaatttgcataaattacgtccctgtaatttcatattcct- 26236298  T
Q  172 ccacttttggtccct 186  Q
    |||||||||||||||    
T  26236299 ccacttttggtccct 26236313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 15106443 - 15106308
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnnttagattttgtccatgtaattttagattcttcc 100  Q
    ||||||||||||||||||||||| |||||||||| ||||| | |||| || ||||||          ||||||||||||| |||||||| ||||||||||    
T  15106443 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaaatttagattttgtccctgtaatttcagattcttcc 15106344  T
Q  101 acttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||  ||| || || || |||||||||| ||||    
T  15106343 acttttgatccctcattccaccacgtcagcaaaatc 15106308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 26236277 - 26236330
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  26236277 gtccctgtaatttcatattcctccacttttggtccctcattttacgtgccatgt 26236330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 30390655 - 30390602
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  30390655 gtccctgtaatttcagattccttcatttttggtccctcattttacgtgctatgt 30390602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 17850587 - 17850723
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt-nnnnnnnnnnttagattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| || |||| |           ||||||||||||  |||||||| |||||||||    
T  17850587 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctataaaaaaaagatttagattttgtctctgtaatttaagattcttc 17850686  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||  ||| || || || |||||||||||||||    
T  17850687 cacttttgatccctcattccaccacgtcagcagaatc 17850723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 19251847 - 19251711
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt-nnnnnnnnnnttagattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||| |||||||||||||||||||  ||| || ||||||           ||||||| ||||| |||||||| | |||||||    
T  19251847 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaagatttagattctgtccttgtaatttcatattcttc 19251748  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||  |||| || ||||| |||||||||||||||    
T  19251747 cactttcggtccctcatttcaccacgtcagcagaatc 19251711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 20499054 - 20498986
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| |||||||| ||||||| ||||||| ||||| ||| |||||||||||    
T  20499054 ttagattttgtccctgtaatttcagattctttcacttttggtccttcatttcaccacatcagcagaatc 20498986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 34548574 - 34548710
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||| |||||||||||||||||||||||||||||    ||| || ||||||          || |||||||||||||||||||| | ||| |||    
T  34548574 gggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaagatttagattttgtccatgtaatttcatattgttc 34548673  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||| ||| |||  ||||||||||||||||| ||||||    
T  34548674 cacctttggtcactcctttcatcacgtcagtagaatc 34548710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23855072 - 23855031
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  23855072 gggtaaatacctcttttcgtccctgtaatattagcgaattcc 23855031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 26560556 - 26560691
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnnttagattttgtccatgtaattttagattcttcc 100  Q
    |||| |||| |||||||||||||||||||||||  ||||| | |||| || ||||||          |||||||| |||| |||||||| ||||||||||    
T  26560556 gggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgtaaaaaaagatttagatttagtccctgtaatttcagattcttcc 26560655  T
Q  101 acttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||| |||| |  || || |||||||||||||||    
T  26560656 acttttggtcccttattccaccacgtcagcagaatc 26560691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 13254566 - 13254626
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtca 128  Q
    ||||||||||||| |||||||| |||||||| ||||||| || | ||||||||||||||||    
T  13254566 ttagattttgtccttgtaatttcagattctttcacttttggttcctcctttcatcacgtca 13254626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 21482189 - 21482146
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtcc 111  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  21482189 ttagattttgtccctgtcattttagattcttccacttttagtcc 21482146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26236472 - 26236433
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  26236472 gggtaaatacctcttttcgtccctgtaatattagcgaatt 26236433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 39878407 - 39878361
Alignment:
Q  176 ttttggtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||    
T  39878407 ttttcgtccctgtaatttcagattttttcacttttggtccctcattt 39878361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17463469 - 17463428
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  17463469 gggtaaatacctcttttcgcccctgtaatattagcgaattcc 17463428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 20499045 - 20499004
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  20499045 gtccctgtaatttcagattctttcacttttggtccttcattt 20499004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22263571 - 22263530
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  22263571 gggtaaatacctcttttcgttcctgtaatattagcgaattcc 22263530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 26236205 - 26236242
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctc 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  26236205 gtccctgtaatttcagattctttcacttttggtccctc 26236242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 22263260 - 22263328
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |  || || |||||||||||||||    
T  22263260 ttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatc 22263328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 26236404 - 26236336
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| ||||||||||| |||| |||| || || || ||||| |||||||||    
T  26236404 ttagattttgtccctgtaatttcagattcttccatttttggtccctcattccaccacgtaagcagaatc 26236336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 23806261 - 23806198
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagca 131  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||||||||    
T  23806261 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagca 23806198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23806330 - 23806291
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  23806330 gggtaaatacctctttttgtccctgtaatattagcgaatt 23806291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 23854688 - 23854727
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  23854688 gggttaatacctcttttcgtccctgtaatattagcgaatt 23854727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 13254733 - 13254695
Alignment:
Q  184 cctgtaatttcagattccttcacttttggtccctcattt 222  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  13254733 cctgtaatttcagattcttccacttttggtccctcattt 13254695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 13254811 - 13254773
Alignment:
Q  4 taaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  13254811 taaatatctcttttcgtccctgtaatattagcgaattcc 13254773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 23046776 - 23046822
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttc 114  Q
    ||||||| ||||| |||||||| ||||||||||||||| ||||||||    
T  23046776 ttagattctgtccctgtaatttcagattcttccactttgagtccttc 23046822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 44098931 - 44098885
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttc 114  Q
    ||||||| ||||| |||||||| ||||||||||||||| ||||||||    
T  44098931 ttagattatgtccctgtaatttcagattcttccactttgagtccttc 44098885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 13284484 - 13284545
Alignment:
Q  75 ttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||| |||||||| | ||||||||||||||||||| || ||||| |||| || |||||||    
T  13284484 ttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacgacaacagaatc 13284545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23046707 - 23046748
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||||||| |||||||| || |||||||    
T  23046707 gggtaaatacctcttttcgtccttgtaatatgagcgaattcc 23046748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23047960 - 23047919
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||| |||||||||||||||||| || |||||||    
T  23047960 gggtaaatacctattttcgtccctgtaatatgagcgaattcc 23047919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42670717 - 42670758
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||| ||||||||||||||||||||||||| ||| |||||||    
T  42670717 gggttaatacctcttttcgtccctgtaatagtagcgaattcc 42670758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 12419032 - 12418964
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| |||||||| |||||  ||||| |||||||||||||| || ||| | || ||||||||||||    
T  12419032 ttagattctgtccatgaaatttccgattcctccacttttagtccctcatttaaccatgtcagcagaatc 12418964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 12431092 - 12431024
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| |||||||| |||||  ||||| |||||||||||||| || ||| | || ||||||||||||    
T  12431092 ttagattctgtccatgaaatttccgattcctccacttttagtccctcatttaaccatgtcagcagaatc 12431024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 15106367 - 15106327
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  15106367 gtccctgtaatttcagattcttccacttttgatccctcatt 15106327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 23806252 - 23806212
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  23806252 gtccctgtaatttcatattcttccacttttggtccctcatt 23806212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26136195 - 26136163
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatatta 33  Q
    |||||||||||||||||||||| ||||||||||    
T  26136195 gggtaaatacctcttttcgtccttgtaatatta 26136163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26236127 - 26236167
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    ||||||||| |||||||||||| ||||||||||| ||||||    
T  26236127 gggtaaatatctcttttcgtccttgtaatattagcgaattc 26236167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 26236395 - 26236355
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||| | || |||||||||||||||    
T  26236395 gtccctgtaatttcagattcttccatttttggtccctcatt 26236355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 26560632 - 26560668
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccct 217  Q
    |||||||||||||||||||| | ||||||||||||||    
T  26560632 gtccctgtaatttcagattcttccacttttggtccct 26560668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 30390528 - 30390596
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| |||| ||||    
T  30390528 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcaaaatc 30390596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 30390537 - 30390577
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  30390537 gtccctgtaatttcatattcttccacttttggtccctcatt 30390577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44099000 - 44098960
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    ||||||||| ||||||||||||||||||||| || ||||||    
T  44099000 gggtaaatatctcttttcgtccctgtaatatgagcgaattc 44098960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 5e-68; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 7126226 - 7126060
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  7126226 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcatatt 7126127  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  7126126 cctcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 7126060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 69 - 234
Target Start/End: Complemental strand, 24651007 - 24650843
Alignment:
Q  69 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattc 168  Q
    |||||||| ||| |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||     
T  24651007 tagattttatccctgtaattttagattcttccacttttgatccctcctttcatcacgtcagcagaatccgcataaattacatccctgtaatttcatattt 24650908  T
Q  169 ctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  24650907 ctcccac-tttggtccctgtaatttcagattcctccatttttggtccctcattttacgtgccatgt 24650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 14143902 - 14144136
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||          || ||||||||||| |||||||| | |||||||    
T  14143902 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 14144001  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagatt 199  Q
    ||||||| || | || |||||||||||||| ||||||  ||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||| |||    
T  14144002 cacttttggtacctcatttcatcacgtcagtagaatctgcataaattacgtccctgtaatttcagattccttccacttttggtccatgtaatttcaaatt 14144101  T
Q  200 ccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||| |||||||||||||||||||||||||||||||    
T  14144102 cctccacttttggtccctcattttacgtgccatgt 14144136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 20709521 - 20709355
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||   |||||||||| |||||||||||||| |||    
T  20709521 ttagattttgtccatgtaatttcatattcttccactttttgtccttcctttcatcacatcagcagaatatgcataaattacatccctgtaatttcagatt 20709422  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||||||||||||    
T  20709421 cctcccacttttgatccctgtaatttcatattcctccactttttgtccctcattttacgtgccatgt 20709355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 17762283 - 17762517
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    ||||||||||||||||| |||||||||||||||| |||||||  ||| || ||||||          || | ||||||| | |||||||| |||||||||    
T  17762283 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttatattttgttcctgtaatttcagattcttc 17762382  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagatt 199  Q
    ||||||| |||| |||||| ||||||| |||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  17762383 cacttttggtccctcctttaatcacgtaagcagaatctgcataaattacgtccctgtaatttcatattcctcccgcttttggtccctgtaattttagatt 17762482  T
Q  200 ccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||| ||||||||||||||||||||| || ||||||    
T  17762483 cctccacttttggtccctcattttatgtcccatgt 17762517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 24837547 - 24837312
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||| || ||||||            ||||||||||||| |||||||| | ||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 24837448  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    | ||||||  ||| ||||||||||| |||| |||||||  |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  24837447 ctacttttgctccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctctcacttttggtccctgtaatttcagat 24837348  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||| ||||||||||||||| ||||||    
T  24837347 tcctccacttttgatccctcattttacgtaccatgt 24837312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 31799949 - 31799783
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    |||||||||||||||||||||| |||||||||| |||||  ||| |||||||||||||||||||||||   |||||||||||||||| |||||||| |||    
T  31799949 ttagattttgtccatgtaatttcagattcttcctcttttgatccctcctttcatcacgtcagcagaatttgcataaattacgtccctttaatttcagatt 31799850  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||    
T  31799849 cctcccacttttggtccctgtaatttcaaaatcctccacttttggtccctcattttacatgccatgt 31799783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 41001729 - 41001496
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttcc 100  Q
    ||||||||||| ||||||||||||||||||||| |||||||  ||| || || |||          || ||||||||||| | |||||| ||||||||||    
T  41001729 ggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaagatttagattttgtccctataatttcagattcttcc 41001630  T
Q  101 acttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattc 200  Q
    |||||| |||| ||||||||||| |||| ||||| |  ||||||||| ||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  41001629 acttttggtccctcctttcatcaagtcaacagaacctacataaattatgtcactgtaatttcatcttcctcccacttctggtccctgtaatttcagattc 41001530  T
Q  201 cttcacttttggtccctcattttacgtgccatgt 234  Q
    || || |||| |||||||||||||||||||||||    
T  41001529 ctccatttttagtccctcattttacgtgccatgt 41001496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 994055 - 993890
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||  |||||||||||||||| |||| |||||| |||| |||| |||||||   |||||||||||||||||||||||| |||    
T  994055 ttagattttgtccctgtaattgcagattcttccacttttggtccctccttttatcatgtcaacagaatctgtataaattacgtccctgtaatttcagatt 993956  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| |||||    
T  993955 cctcccacttttggtccctgtaa-ttcatattcctccacttttggtccctcattttacgtgtcatgt 993890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 4919299 - 4919133
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| ||||||||| ||||||  ||| ||||||||||| |||| ||||||   |||||||||||||| ||||||||||||||    
T  4919299 ttagattttgtccctgtaatttcagattcttctacttttgatccctcctttcatcaagtcaacagaatatgcataaattacgtccttgtaatttcatatt 4919200  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| |||||||||| ||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  4919199 cctccaacttttggtcactgtaatttcaaattcctccacttttggtccctcattttacgtaccatgt 4919133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 29444875 - 29445041
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||| ||||| |||||||| | ||||||| |||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  29444875 ttagattatgtccttgtaatttcatattcttctacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 29444974  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| | |||||||||||||||||||| |||||| || |||| ||||||||||||||||| |||||    
T  29444975 cctcctagttttggtccctgtaatttcaaattcctacattttttgtccctcattttacgtgtcatgt 29445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 6817430 - 6817265
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | |||||||||||||| |||  |||||||||||| ||||||||||   ||||||||||||||||||||||||| |||    
T  6817430 ttagattttgtccctgtaatttcatattcttccacttttggtcactcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcaaatt 6817331  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||| |  |||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  6817330 cctcccacttttgat-tctgtaatttcagattcctccatttttggtcccttattttacgtgccatgt 6817265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 232
Target Start/End: Original strand, 24074372 - 24074535
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||  |||||||| | |||||||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||  |||||||| |||    
T  24074372 ttagattttgtctctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccccataatttcagatt 24074471  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccat 232  Q
    | ||||||||||| | |||||||||||| ||| || |||||||||||||||||||||||||||||    
T  24074472 catcccacttttgat-cctgtaatttcaaatttctccacttttggtccctcattttacgtgccat 24074535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 14411697 - 14411884
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||            ||| |||||||| ||||||||| ||||||||    
T  14411697 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcagattctt 14411796  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccct 186  Q
    |||||||| |||| |||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14411797 ccacttttggtccctcctttcatcacgtcagcagaatttgcataaattacgtccctgtaatttcagattcctcccacttttggtccct 14411884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 27159266 - 27159148
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||||| ||||||||| |||| |||| | ||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  27159266 ttagattttgtccctgtaattttatattcttccatttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 27159167  T
Q  168 cctcccacttttggtccct 186  Q
    ||||||||||||| |||||    
T  27159166 cctcccacttttgatccct 27159148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 18336467 - 18336691
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn---ttagattttgtccatgtaattttagattct 97  Q
    ||||||||| |||||||||||||| ||||||||| ||||||| |||| || ||||||             ||||||||||||| |||||||| |||||||    
T  18336467 gggtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 18336566  T
Q  98 tccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcaga 197  Q
    ||| |||||  ||| |||||||||||| ||||||||||   ||||||||||||||||||||||||| ||||            |||||||||||||||||    
T  18336567 tccgcttttgatccctcctttcatcacatcagcagaatttgcataaattacgtccctgtaatttcagattc------------gtccctgtaatttcaga 18336654  T
Q  198 ttccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  18336655 ttcctccacttttggtccctcattttacgtgacatgt 18336691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 23979041 - 23979136
Alignment:
Q  138 ccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||| || ||| |||||| |||||||||||||| |||||    
T  23979041 ccataaattacgtccttgtaatttcatatttctcccacttttggtccctttaatttcagattactccacgtttggt-cctcattttacgtgtcatgt 23979136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 227
Target Start/End: Complemental strand, 22571386 - 22571227
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||| |||||||||| | |||||||   ||||  ||| || ||||| ||||||| || ||||  |||||||||||||||||||||||||  ||    
T  22571386 ttagattttgttcatgtaatttcaaattcttctcgttttgctccctcatttcaccacgtcaacaaaatctgcataaattacgtccctgtaatttcaggtt 22571287  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgt 227  Q
    ||||| || |||||||||| |||||||| |||| | | ||||||||||||||||| ||||    
T  22571286 cctcctacatttggtccctctaatttcatattcatccgcttttggtccctcatttcacgt 22571227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 6817123 - 6817259
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||| |||||||||||||||||||  ||| || ||||||          || ||||| |||||||||||||| |||||||||    
T  6817123 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaagatttagattatgtccatgtaatttcagattcttc 6817222  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| |||| || ||||| |||||||||||||||    
T  6817223 cacttttggtccctcatttcaccacgtcagcagaatc 6817259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 23979279 - 23979142
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||            ||||||||||||| |||||||| | ||||||    
T  23979279 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 23979180  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| |||| || ||||| |||||||||||||||    
T  23979179 ccacttttggtccctcatttcaccacgtcagcagaatc 23979142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 31799640 - 31799752
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||| ||||||||| |||||||  |||||| ||||||            ||||||||||||| |||||||| ||||||||    
T  31799640 gggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 31799739  T
Q  99 ccacttttagtcc 111  Q
    |||||||| ||||    
T  31799740 ccacttttggtcc 31799752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 14411847 - 14411901
Alignment:
Q  181 gtccctgtaatttcagattccttc-acttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| |||||    
T  14411847 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgtcatgt 14411901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 7125923 - 7126054
Alignment:
Q  6 aatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttccactt 104  Q
    ||||||||||||||| ||||||||||||| ||||||| |||| || ||||||          || ||||||||||| | |||||| ||||||||||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtccctataatttcagattcttccactt 7126022  T
Q  105 ttagtccttcctttcatcacgtcagcagaatc 136  Q
    || |||| |  || || |||||||||||||||    
T  7126023 ttggtcccttattccaccacgtcagcagaatc 7126054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 20709281 - 20709349
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| ||||| |||||||| | |||||||||||||| |||| || ||||| |||||||||||||||    
T  20709281 ttagattctgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatc 20709349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 24837169 - 24837306
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||| ||| |||||||  ||| || ||||||            ||||||||||||| |||||||| | ||||||    
T  24837169 gggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 24837268  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| |||| || || || ||||| |||||||||    
T  24837269 ccacttttggtccctcattccaccacgtaagcagaatc 24837306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 30512288 - 30512327
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  30512288 gggtaaatatctcttttcgtccctgtaatattagtgaatt 30512327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 30552628 - 30552667
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  30552628 gggtaaatatctcttttcgtccctgtaatattagtgaatt 30552667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 27159185 - 27159135
Alignment:
Q  181 gtccctgtaatttcagattccttc-acttttggtccctcattttacgtgcc 230  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  27159185 gtccctgtaatttcagattcctcccacttttgatccctcattttacgtgcc 27159135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7126295 - 7126254
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  7126295 gggtaaatacctcttttcatccctgtaatattagcgaattcc 7126254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24651077 - 24651036
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  24651077 gggtaaatacctcttttcgtctctgtaatattagcgaattcc 24651036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 14411975 - 14411907
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| |||||||||||| ||| |||| || || || ||||| |||||||||    
T  14411975 ttagattttgtccttgtaatttcagattcttccacgtttggtccctcattccaccacgtaagcagaatc 14411907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17762660 - 17762620
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  17762660 gggtaaatacctcttttcgtccctgtagtattagcgaattc 17762620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 24074611 - 24074543
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |  ||| | |||||||||||||||    
T  24074611 ttagattttgtccttgtaatttcatattcttccacttttggtcccttatttaaccacgtcagcagaatc 24074543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 30512361 - 30512405
Alignment:
Q  177 tttggtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  30512361 tttggtccctgtaatttcagatttttccacttttggtccctcatt 30512405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 30552701 - 30552745
Alignment:
Q  177 tttggtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  30552701 tttggtccctgtaatttcagatttttccacttttggtccctcatt 30552745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 41001422 - 41001490
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | |||||||||||||| ||||||| || || || || |||||||||    
T  41001422 ttagattttgtccctgtaatttcatattcttccacttttggtccttcattccaccatgtaagcagaatc 41001490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 993751 - 993884
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnnttagattttgtccatgtaattttagattcttcca 101  Q
    ||||||||| |||||||||| |||||||||||| |||||||  ||| || ||||||          |||||||| |||| |||||||| | |||||||||    
T  993751 ggtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgt-aaaaaaaaattagatttagtccttgtaatttcatattcttcca 993849  T
Q  102 cttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||| |||| || || || ||||| |||||||||    
T  993850 cttttggtccctcattccaccacgtaagcagaatc 993884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 4919059 - 4919126
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaat 135  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| ||||||||    
T  4919059 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaat 4919126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24074303 - 24074342
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  24074303 gggtaaatacctcttttcgtccatgtaatattagcgaatt 24074342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 29445115 - 29445072
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtcc 111  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||    
T  29445115 ttagattttgtccttgtaatttcagattcttccacttttggtcc 29445072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 18336833 - 18336727
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||| ||||| |||||||  ||| || ||||||            ||||||||||||| |||||||| ||||||||    
T  18336833 gggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 18336735  T
Q  99 ccactttt 106  Q
    ||||||||    
T  18336734 ccactttt 18336727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 24650704 - 24650734
Alignment:
Q  3 gtaaatacctcttttcgtccctgtaatatta 33  Q
    |||||||||||||||||||||||||||||||    
T  24650704 gtaaatacctcttttcgtccctgtaatatta 24650734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29445183 - 29445141
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcca 43  Q
    |||| |||| |||||||||||||||||||||||| ||||||||    
T  29445183 gggttaatatctcttttcgtccctgtaatattagcgaattcca 29445141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 6817200 - 6817241
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    |||| ||||||||||||||| | |||||||||||||||||||    
T  6817200 gtccatgtaatttcagattcttccacttttggtccctcattt 6817241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 20709290 - 20709331
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    ||||||||||||||| |||| | |||||||||||||||||||    
T  20709290 gtccctgtaatttcaaattcttccacttttggtccctcattt 20709331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 20947097 - 20947056
Alignment:
Q  186 tgtaatttcagattccttcacttttggtccctcattttacgt 227  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||    
T  20947097 tgtaatttcagattcctccacttttggtcactcatttcacgt 20947056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 23979201 - 23979160
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    ||||||||||||||| |||| | |||||||||||||||||||    
T  23979201 gtccctgtaatttcaaattcttccacttttggtccctcattt 23979160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 31800013 - 31799976
Alignment:
Q  5 aaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  31800013 aaatacctcttttcgtccctataatattagcgaattcc 31799976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 4919068 - 4919108
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  4919068 gtccctgtaatttcatattcttccacttttggtccctcatt 4919108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 4919366 - 4919326
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||||| ||| |||||||| |||||||    
T  4919366 ggtaaatacctcttttcgtctctggaatattagcgaattcc 4919326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 14144210 - 14144142
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |  || || ||||||| |||||||    
T  14144210 ttagattttgtccctgtaatttcaaattcttccacttttggtcccttattccaccacgtcaccagaatc 14144142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14144279 - 14144223
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt 57  Q
    |||| |||||||||||||||| |||||||||||  ||||||| |||| || ||||||    
T  14144279 gggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgt 14144223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 27159063 - 27159127
Alignment:
Q  72 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||| |||||||| |||||||||||||||| |||| |  || || |||||||||| ||||    
T  27159063 attttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatc 27159127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 27159068 - 27159104
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccct 217  Q
    |||||||||||||||||||| | ||||||||||||||    
T  27159068 gtccctgtaatttcagattcttccacttttggtccct 27159104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 31799718 - 31799754
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccct 217  Q
    |||||||||||||||||||| | ||||||||||||||    
T  31799718 gtccctgtaatttcagattcttccacttttggtccct 31799754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 41424585 - 41424653
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| ||||| ||| |||| ||||||||||||||||||||| || ||| | || ||||||| ||||    
T  41424585 ttagattctgtccctgtcatttcagattcttccacttttagtccctcatttaaacatgtcagcaaaatc 41424653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 7e-67; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 30500418 - 30500184
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||| || ||||||          || ||||||||||| |||||||| | ||| |||    
T  30500418 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaatttagattttgtccctgtaatttcatattgttc 30500319  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagatt 199  Q
    ||||||| |||| ||||||||||||||||||| ||||  |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||| |||    
T  30500318 cacttttggtccctcctttcatcacgtcagcaaaatctacataaattacatccctgtaatttcagattcctcccacttttggtccatgtaatttcaaatt 30500219  T
Q  200 ccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  30500218 ccttcacttttggtccctcattttacgtgccatgt 30500184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 14262414 - 14262179
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||            ||||||||||||| |||||||| | ||| ||    
T  14262414 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattgtt 14262315  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| | |||||| ||||||||| |||||||||||||| ||    
T  14262314 ccacttttagtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaattttagattccttccacttttgatccctgtaatttcaaat 14262215  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||||||||||||||||||||||||||    
T  14262214 tcctccacttttggtccctcattttacgtgccatgt 14262179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 45969915 - 45970150
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||| || ||||||            ||||||||||||| |||||||| ||||||||    
T  45969915 gggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 45970014  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
     ||||||| |||  ||||||||||| |||| |||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45970015 tcacttttggtctctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatttcagat 45970114  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    | || ||||||||||||||||||||||||| |||||    
T  45970115 ttctccacttttggtccctcattttacgtgtcatgt 45970150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 14171964 - 14171729
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||            ||||||||||||| ||||||||  |||||||    
T  14171964 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattctt 14171865  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||||||||||||||||||||||| ||||  ||| ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||    
T  14171864 ccacttttggtccttcctttcatcacgtcagcaaaatctgcatcaattacgaccttgtaatttcagattcctcccacttttggtccctgtaatttcagat 14171765  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| || ||||| ||||||||||||||||||||||    
T  14171764 tcctccatttttgatccctcattttacgtgccatgt 14171729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 16721991 - 16722226
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || | ||||            |||||||||||||||||||||| ||||||||    
T  16721991 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattctt 16722090  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||| | ||||||||| |||| |||||||  ||||||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  16722091 ccacttttggtcccttctttcatcaagtcaacagaatctgcataaattatgtcactgtaatttcagattcctcccacttctggtccctgtaatttcagat 16722190  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| ||||||||||||||||||||||||| |||||    
T  16722191 tcctccacttttggtccctcattttacgtgtcatgt 16722226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 14161940 - 14162106
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||| ||||| |||||||| | |||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  14161940 ttagattatgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 14162039  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| | |||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||    
T  14162040 cctcctaattttggtccctgtaatttcaaattcctccatttttggtccctcattttacgtgccatgt 14162106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 9267352 - 9267125
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||          || ||||||||||| |||||| | |||||||||    
T  9267352 gggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtatataaattttttagattttgtccctgtaatatcagattcttc 9267253  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagatt 199  Q
     |||||| |||| ||||||||||| |||| |||||||  ||||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||||    
T  9267252 tacttttggtccctcctttcatcaagtcaacagaatctgcataaattaagtccttgtaatttcagattcctcccacttttggtccttgtaatttcagatt 9267153  T
Q  200 ccttcacttttggtccctcattttacgt 227  Q
    ||| ||||||||||||||||||||||||    
T  9267152 cctccacttttggtccctcattttacgt 9267125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 69 - 234
Target Start/End: Original strand, 21632966 - 21633131
Alignment:
Q  69 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattc 168  Q
    ||||| |||||| |||||||| |||||||| ||||||| |||| ||||||||||| |||| |||||||  ||||||||||||||||||||||||| ||||    
T  21632966 tagatgttgtccctgtaatttcagattctttcacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattc 21633065  T
Q  169 ctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  21633066 ctcccacttttggtccttgtaatttcagattcctccacttttggtccctcattttatgtgccatgt 21633131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 19113143 - 19112908
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||| ||||||||  |||||||  ||| || ||||||            ||||||||| ||| |||||||| ||||||||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 19113044  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    | |||||| |||| ||||||||||| |||| |||||||  |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  19113043 ctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctcccacttttggtccctgtaatttcagat 19112944  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    | || |||||||||||||||||||||||| ||||||    
T  19112943 ttctccacttttggtccctcattttacgtaccatgt 19112908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 45003565 - 45003731
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |||||||||||||||| |||||||   ||||||||||||| |||||||||| |||    
T  45003565 ttagattttgtccctgtaatttcagattcttccactttttgtccctcctttcatcacgtcaacagaatctgtataaattacgtccttgtaatttcagatt 45003664  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||| ||||||||    
T  45003665 cctcccacttttgttccctgtaatttcatattcctccacttttgatccctcattttacatgccatgt 45003731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 52552997 - 52552835
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||  |||||||| | |||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  52552997 ttagattttgtctctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 52552898  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  52552897 cctccc----ttggtccctgtaatttcaaattccttcacttttggtccctcattttacgtgtcatgt 52552835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 15328463 - 15328689
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnnttagattttgtccatgtaattttagattcttcc 100  Q
    |||||||||||||||||||| |||||||||||||| |||| |  ||| || ||||||          ||||||||||||| |||||||| | ||||||||    
T  15328463 gggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgtaaaaaaaaa-ttagattttgtccctgtaatttcatattcttcc 15328561  T
Q  101 acttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattc 200  Q
    | |||  |||| || ||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  15328562 agtttgtgtccctcttttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatttcaaattc 15328661  T
Q  201 cttcacttttggtccctcattttacgtg 228  Q
    || ||||||||||| |||||||||||||    
T  15328662 ctccacttttggtctctcattttacgtg 15328689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 5800674 - 5800840
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||| ||||| |||||||| | ||||||||| |||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  5800674 ttagattatgtccctgtaatttcatattcttccatttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 5800773  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| | |||||||||||||||||||| |||||| || ||||||||||||||||||| ||||||||    
T  5800774 cctcctagttttggtccctgtaatttcaaattcctccatttttggtccctcattttacatgccatgt 5800840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 20854005 - 20853839
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||| |||| || ||||  ||||||||| ||| ||||||||||| |||    
T  20854005 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacataatctgcataaattatgtcactgtaatttcagatt 20853906  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||| ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  20853905 cctcccacttctggtctctgtaattttagattcctccacttttggtccctcattttacgtgccatgt 20853839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 17465672 - 17465511
Alignment:
Q  72 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctc 171  Q
    ||||||||| ||||| ||||||||||| ||||||| |||| |||||||||||||||| || |||   ||||||||||||| ||||||||||| |||||||    
T  17465672 attttgtccctgtaactttagattctttcacttttggtccctcctttcatcacgtcaacaaaatttacataaattacgtctctgtaatttcagattcctc 17465573  T
Q  172 ccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  17465572 ccacttttggt-cctgtaatttcatattcctccacttttggtccctcattttacgtgccatgt 17465511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 68 - 228
Target Start/End: Original strand, 43572458 - 43572620
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcac---gtcagcagaatccccataaattacgtccctgtaatttcat 164  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |||||||||||    ||||||||||||  || || ||||||||||||||||||||    
T  43572458 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcatcaagtcagcagaatctgcacaa-ttacgtccctgtaatttcat 43572556  T
Q  165 attcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtg 228  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||    
T  43572557 attcctcccacttttggtccctgtaatttcaaattactccacttttggtccctcattttacgtg 43572620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 68 - 228
Target Start/End: Original strand, 33372475 - 33372635
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| ||||| |||||||||| |||| ||||||||||||||||||| ||||  ||| ||||| |||| |||||||||| |||    
T  33372475 ttagattttgtccctgtaatttcagattattccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattaagtccttgtaatttcagatt 33372574  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtg 228  Q
    |||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||||||||    
T  33372575 cctcccacttttggtctctgtaatttcatattcctccacttttgatccctcattttacgtg 33372635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 49986527 - 49986763
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn---ttagattttgtccatgtaattttagattct 97  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || | ||||             ||||||||||||| |||||||| |||||||    
T  49986527 gggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 49986626  T
Q  98 tccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcaga 197  Q
    || |||||| |||  |||||||||||  | |  ||||||  |||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  49986627 tctacttttggtctctcctttcatcaatttaatagaatctgcataaattacgtccttgtaatttcagattcctctcacttttggtccctgtaatttcaga 49986726  T
Q  198 ttccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  49986727 ttcctccacttttggtccctcattttacgtaccatgt 49986763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 35996053 - 35995821
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnnttagattttgtccatgtaattttagattcttcc 100  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||| || ||||||          ||||| ||||||   ||||||| ||||||||||    
T  35996053 gggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaa-ttagaatttgtctcagtaatttcagattcttcc 35995955  T
Q  101 acttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattc 200  Q
    |||||| |||| | ||||||||||||| ||||||||  |||||||||||||| ||||  || | ||||||||||||||| |||||||||||||||  |||    
T  35995954 acttttggtcccttctttcatcacgtccgcagaatctgcataaattacgtccttgtatatttagattcctcccactttttgtccctgtaatttcatgttc 35995855  T
Q  201 cttcacttttggtccctcattttacgtgccatgt 234  Q
    || ||||||||||||||||||||||||| |||||    
T  35995854 ctccacttttggtccctcattttacgtgtcatgt 35995821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 38283619 - 38283785
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||| | | |||||| | ||| ||||||||||  ||| ||||||||||||||||||||||||  ||||| ||||||||||||||||| | |||    
T  38283619 ttagattttgttcctataatttcatattgttccacttttgatccctcctttcatcacgtcagcagaatctacataagttacgtccctgtaatttaagatt 38283718  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||| |||| |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  38283719 cctcccactttttgtccgtgtaatttcaaattcctccacttttggtccctcattttacgtgccatgt 38283785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 47575581 - 47575415
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||  |||||||| ||||| ||| |||||| |||  ||||||||||||||||||||||||  |||||||||  |||||||||||||| |||    
T  47575581 ttagattttgtctctgtaatttcagatttttcaacttttggtctctcctttcatcacgtcagcagaatctgcataaattatatccctgtaatttcaaatt 47575482  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||| |||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  47575481 cctcccattttttgtccctgtaatttcaaattcctccacttttgatccctcattttacgtgccatgt 47575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 210
Target Start/End: Original strand, 11003801 - 11003943
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||| |||| || |||   ||| ||||||||||||||||||||| |||    
T  11003801 ttagattttgtccttgtaatttcagattcttccacttttggtccatcctttcatcaagtcaacaaaatatgcatcaattacgtccctgtaatttcagatt 11003900  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcactttt 210  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  11003901 cctcccacttttggtccctgtaatttcagattcctccactttt 11003943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 4204999 - 4204851
Alignment:
Q  86 attttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccc 185  Q
    |||| ||||||||||||||||  ||| || ||| |||||||||| ||||||  |||||||||| ||| | |||||||| |||||||||||| |||||| |    
T  4204999 atttcagattcttccacttttgatccctctttttatcacgtcagtagaatctgcataaattacatccatataatttcagattcctcccactattggtctc 4204900  T
Q  186 tgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||| ||| || |||||||||||||||||||||||||||||||    
T  4204899 tgtaatttcatattactccacttttggtccctcattttacgtgccatgt 4204851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 17649319 - 17649224
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttca 163  Q
    ||||||||||||| |||||||| ||||| |||||| ||| |||  |||||| |||| |||| |||||||  |||||||||||||||||||||||||    
T  17649319 ttagattttgtccctgtaatttcagattattccacatttggtctctccttttatcaagtcaacagaatctgcataaattacgtccctgtaatttca 17649224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 4204709 - 4204845
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    ||||||| ||||||||||||||||||||||||| |||||| || ||| ||  |||||          || ||||| ||||| |||||||| |||||||||    
T  4204709 gggtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaaaaaagatttagattatgtccctgtaatttcagattcttc 4204808  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| |||| || ||||| |||||||||||||||    
T  4204809 cacttttggtccctcatttcaccacgtcagcagaatc 4204845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 9266975 - 9267112
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||            ||||||||||||| |||||||| | ||||||    
T  9266975 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 9267074  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| |||| || || || ||||| |||||||||    
T  9267075 ccacttttggtccctcattccagcacgtaagcagaatc 9267112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 35995678 - 35995815
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt--agattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||| ||||||||||||| |||||||  ||| || ||||||          ||  ||||||||||| |||||||| ||||||||    
T  35995678 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattctt 35995777  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| |||| || || || ||||| |||||||||    
T  35995778 ccacttttggtccctcattccaccacgtaagcagaatc 35995815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 43572700 - 43572632
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| ||||| |||||||| |||||||||||||||| |||| || ||||| |||||||||||||||    
T  43572700 ttagattctgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatc 43572632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 45970294 - 45970255
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45970294 gggtaaatacctcttttcgtccctgtaatattagtgaatt 45970255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 30500043 - 30500178
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnnttagattttgtccatgtaattttagattcttcc 100  Q
    |||| ||||||||||||| ||||||||||||||| ||||| |  ||| || ||||||          ||||||||||||| |||||||| | ||||||||    
T  30500043 gggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatttagattttgtccctgtaatttcatattcttcc 30500142  T
Q  101 acttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||| |||| |  || || |||||||||||||||    
T  30500143 acttttggtcccttattccaccacgtcagcagaatc 30500178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16722369 - 16722313
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt 57  Q
    |||||||||||||||||||||||||||||||||| ||||| || ||| || ||||||    
T  16722369 gggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgt 16722313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 38283859 - 38283791
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| | |||||| ||||||||||||||||  ||| |  |||||||||||||||||||||    
T  38283859 ttagattttgtccctataatttcagattcttccacttttgatcccttatttcatcacgtcagcagaatc 38283791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 20853695 - 20853734
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  20853695 gggtaaatacctcttttcgtccctgtaatattagcgaatt 20853734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21632901 - 21632940
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  21632901 gggtaaatacctcttttcgtccctgtaatattagcgaatt 21632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 35740884 - 35740927
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtcc 111  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  35740884 ttagattttgtccctgtaattttaaattcttccacttttagtcc 35740927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 36990969 - 36990926
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtcc 111  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  36990969 ttagattctgtccctgtaattttagattcttccacttttagtcc 36990926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 37016409 - 37016366
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtcc 111  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  37016409 ttagattctgtccctgtaattttagattcttccacttttagtcc 37016366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14161871 - 14161913
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcca 43  Q
    ||||||||| |||||||||||||||||||||||| ||||||||    
T  14161871 gggtaaatatctcttttcgtccctgtaatattagcgaattcca 14161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14171587 - 14171633
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaattt 47  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  14171587 gggtaaataccacttttcgtccctgtaatattagcgaattccgattt 14171633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 4204786 - 4204827
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  4204786 gtccctgtaatttcagattcttccacttttggtccctcattt 4204827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5800982 - 5800941
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  5800982 gggttaatacctcttttcgtccctgtaatattagcgaattcc 5800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 14162248 - 14162137
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||| |||||||||||| |||||||||||||||| |||||||  ||| || ||||||          || ||||||||||| |||||||| |||||||||    
T  14162248 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaagagatttagattttgtccttgtaatttcagattcttc 14162149  T
Q  100 cacttttagtcc 111  Q
    ||||||| ||||    
T  14162148 cacttttggtcc 14162137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19112764 - 19112805
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  19112764 gggtaaatacctcttttcgtccatgtaatattagcgaattcc 19112805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19720333 - 19720374
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  19720333 gggtaaatatctcttttcgtccctgtaatattagcgaattcc 19720374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27946243 - 27946202
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||||||||||||||||| |||||||||| |||||||    
T  27946243 gggtaaatacctcttttcgtcccagtaatattagcgaattcc 27946202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 43572691 - 43572650
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  43572691 gtccctgtaatttcagattcttccacttttggtccctcattt 43572650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5800605 - 5800637
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatatta 33  Q
    |||||||||||||||||||||||||||||||||    
T  5800605 gggtaaatacctcttttcgtccctgtaatatta 5800637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 14171655 - 14171723
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | ||||||||||||||  ||| || || || |||||||||||||||    
T  14171655 ttagattttgtccctgtaatttcaaattcttccacttttgatccctcattccaccacgtcagcagaatc 14171723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 14262105 - 14262173
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |  || || ||| |||||||||||    
T  14262105 ttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacatcagcagaatc 14262173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 15328769 - 15328701
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| ||||| |||||||||| |||| |  || || |||||||||||||||    
T  15328769 ttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatc 15328701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 21633205 - 21633137
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| || || || ||||| || ||||||    
T  21633205 ttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagaagaatc 21633137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 21633196 - 21633156
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  21633196 gtccctgtaatttcagattcttccacttttggtccctcatt 21633156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33372406 - 33372446
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  33372406 gggtaaatatctcttttcgtccctgtaatattagcgaattc 33372446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 35995756 - 35995796
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  35995756 gtccctgtaatttcagattcttccacttttggtccctcatt 35995796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17465745 - 17465706
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  17465745 gggtaaatacctcttttcgtccttgtaatattagcgaatt 17465706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 32998443 - 32998376
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaat 135  Q
    ||||||| ||||| |||||||| |||||| |||||||||||||| || ||| | || |||||||||||    
T  32998443 ttagattctgtccctgtaatttcagattcctccacttttagtccctcgtttaaccatgtcagcagaat 32998376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 33372782 - 33372743
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  33372782 gggtaaatacctcttttcgtccccgtaatattagcgaatt 33372743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 49986906 - 49986867
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  49986906 gggtaaatacctcttttcgtcccagtaatattagcgaatt 49986867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 27946114 - 27946148
Alignment:
Q  6 aatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||||||||||||||||||||||| |||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatt 27946148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 33372713 - 33372675
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccactttt 106  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  33372713 ttagattttgtccctgtaatttcagattcttccactttt 33372675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 35741962 - 35741826
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||| |||||| ||||| |||||||||||||||| |||||||| ||| || ||||||          || ||||| ||||| ||| ||||||||||||||    
T  35741962 gggttaataccacttttggtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagtttagattatgtccctgtcattttagattcttc 35741863  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    | |||||||||| ||  || | ||| |||||||||||    
T  35741862 cgcttttagtccctcaattgaacacatcagcagaatc 35741826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 52552761 - 52552799
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccactttt 106  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  52552761 ttagattttgtccctgtaatttcagattcttccactttt 52552799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14262036 - 14262077
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||| |||| |||||||||||||||||||||||| |||||||    
T  14262036 gggttaatatctcttttcgtccctgtaatattagcgaattcc 14262077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24490297 - 24490256
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||| || ||||| |||||||||||||||||||||||    
T  24490297 gggtaaatatcttttttcctccctgtaatattagtgaattcc 24490256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 32998434 - 32998397
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctc 218  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  32998434 gtccctgtaatttcagattcctccacttttagtccctc 32998397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 9267053 - 9267093
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  9267053 gtccctgtaatttcatattcttccacttttggtccctcatt 9267093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 14262114 - 14262150
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccct 217  Q
    |||||||||||||||||||| | ||||||||||||||    
T  14262114 gtccctgtaatttcagattcttccacttttggtccct 14262150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 10108370 - 10108605
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||            ||||||||||||| |||||||| | ||||||    
T  10108370 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108469  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||| ||||||||||||||||||||||||  |||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| ||    
T  10108470 ccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagattcgtcccacttttggtccctgtaatttcaaat 10108569  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||||||||||||||||||||||||||    
T  10108570 tcctccacttttggtccctcattttacgtgccatgt 10108605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 17623196 - 17623030
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | |||||||||||||| |||  ||||||||||||||||||||||||  ||||||||| ||||||||||||||| |||    
T  17623196 ttagattttgtccttgtaatttcaaattcttccacttttggtcactcctttcatcacgtcagcagaatctgcataaattatgtccctgtaatttcaaatt 17623097  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17623096 cctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgt 17623030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 30789885 - 30789650
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||| || ||||||            ||||||||||||| |||||||| ||||||||    
T  30789885 gggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 30789786  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||| || |||||||||||||||| ||||  ||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  30789785 ccacttttggtccatcgtttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcatattcctcccacttttggtccttgtaatttcagat 30789686  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||| |||||||| |||||||||||||    
T  30789685 tcctccacttttgatccctcatcttacgtgccatgt 30789650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 21148314 - 21148086
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    ||||||||||||||||||||| ||||||||||||||||||||  ||| || ||||||            ||||||||||||| |||||||| | ||||||    
T  21148314 gggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattctt 21148215  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    ||||||||||||| ||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||| ||    
T  21148214 ccacttttagtccctcctttcatcatgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggt-cctataatttcaaat 21148116  T
Q  199 tccttcacttttggtccctcattttacgtg 228  Q
    |||| |||||||||||||||||||||||||    
T  21148115 tcctccacttttggtccctcattttacgtg 21148086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 5554869 - 5555102
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt--agattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||           |  ||||||||||| | |||||| | ||||||    
T  5554869 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatattctt 5554968  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||| | ||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||| | |||||||||||||||||||  ||    
T  5554969 ccacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctggaatttcagattcctcctagttttggtccctgtaatttcgaat 5555068  T
Q  199 tccttcacttttggtccctcattttacgtgccat 232  Q
    ||||||||||||||||||||||||||||||||||    
T  5555069 tccttcacttttggtccctcattttacgtgccat 5555102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 2583389 - 2583555
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| ||||||||  |||||||| ||||||  ||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  2583389 ttagattttgtccctgtaatttcggattcttctacttttgatccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 2583488  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||||    
T  2583489 cctcctacttttggtccctgtaatttcaaattcctccacttttagtccctcattttacatgccatgt 2583555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 68 - 233
Target Start/End: Original strand, 42605822 - 42605987
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||| ||| |||||||| | |||||||||||||| |||| |||||| |||||||||| |||||   ||||||||||||||||||||||||| |||    
T  42605822 ttagattttatccctgtaatttcatattcttccacttttggtccctcctttaatcacgtcagtagaatatgcataaattacgtccctgtaatttcaaatt 42605921  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatg 233  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42605922 cctcccgcttttggtcgctgtaatttcagattcctccacttttggtccctcattttacgtgccatg 42605987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 14767882 - 14767656
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnnttagattttgtccatgtaattttagattcttcc 100  Q
    |||||||||||||||||||| |||||||||||||| |||| |  ||| || ||||||          ||||||||||||| |||||||| | ||||||||    
T  14767882 gggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgtaaaaaaaaa-ttagattttgtccctgtaatttcatattcttcc 14767784  T
Q  101 acttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattc 200  Q
    | |||  |||| || ||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  14767783 agtttgtgtccctcttttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatttcaaattc 14767684  T
Q  201 cttcacttttggtccctcattttacgtg 228  Q
    || ||||||||||| |||||||||||||    
T  14767683 ctccacttttggtctctcattttacgtg 14767656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 26136685 - 26136920
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    |||| ||||||||||||||| ||||||||||||| |||||||| ||| || ||||||            ||||||||||||| |||||||| ||||||||    
T  26136685 gggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaaatttagattttgtccttgtaatttcagattctt 26136784  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    ||| ||||  | | ||||||||||| ||||||| ||||  ||||||||||||||||||||||||| ||| |||||||||||||||| |||| ||||||||    
T  26136785 ccaattttgattcctcctttcatcaagtcagcataatctgcataaattacgtccctgtaatttcagatttctcccacttttggtccttgtactttcagat 26136884  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| || ||||||||||||||||||||||||||||    
T  26136885 tcctccatttttggtccctcattttacgtgccatgt 26136920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 22494454 - 22494619
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||| | |||||||| | ||||||||| |||| ||||||| ||| |||||||||||||||||  ||||||||||||||||||||||| | |||    
T  22494454 ttagattttgttcctgtaatttcatattcttccatttttggtccttc-tttaatcacgtcagcagaatctgcataaattacgtccctgtaattttagatt 22494552  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  22494553 cctcctacttttggtcccagtaatttcagattcctccacttttggtccctcattttacgtgtcatgt 22494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 7689598 - 7689758
Alignment:
Q  74 tttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctccc 173  Q
    ||||||| |||||||| |||||||||||||||| |||| || ||||||||| || ||| ||||  ||| |||||||||| |||||||||| |||||||||    
T  7689598 tttgtccttgtaatttcagattcttccacttttggtccctcttttcatcacatcggcaaaatctgcatcaattacgtccttgtaatttcagattcctccc 7689697  T
Q  174 acttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  7689698 acttttagtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgt 7689758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 73 - 234
Target Start/End: Complemental strand, 43851968 - 43851807
Alignment:
Q  73 ttttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcc 172  Q
    |||||||  |||||||  |||||||||||||||| |||| ||||||||||||||||||| |||   ||| |||||||||| |||||||||| ||||||||    
T  43851968 ttttgtctctgtaattcaagattcttccactttttgtccctcctttcatcacgtcagcaaaatttgcatcaattacgtccttgtaatttcagattcctcc 43851869  T
Q  173 cacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||||||||| |||||| |||||||| |||||||||||||||| |||||    
T  43851868 cacttttggtccctgtaatttcatattcctccacttttgatccctcattttacgtgtcatgt 43851807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 14820295 - 14820521
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| ||  |||||          || ||||||||||| |||||||| | |||||||    
T  14820295 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 14820394  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagatt 199  Q
    ||||||| |||| |||||||||||| |||||||||||  ||||||||||||||||||||||||| ||| |||| | ||||| |||| ||||| ||| |||    
T  14820395 cacttttggtccctcctttcatcacatcagcagaatctgcataaattacgtccctgtaatttcagatttctcctagttttgctccccgtaatctcaaatt 14820494  T
Q  200 ccttcacttttggtccctcattttacg 226  Q
    |||  ||||||||||||||||||||||    
T  14820495 cctctacttttggtccctcattttacg 14820521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 42113293 - 42113127
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||| ||||| | |||||| | ||||||||||||||  ||| ||||||||||| ||||||| | ||  ||||||||| |||||||||||||||||||    
T  42113293 ttagattatgtccctttaatttcaaattcttccacttttgatccctcctttcatcatgtcagcaaattctgcataaattatgtccctgtaatttcatatt 42113194  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||||| |||||||| ||| || ||||||||||||||||||||| ||| |||||    
T  42113193 cctcccacttttggtccctataatttcatattactccacttttggtccctcattttatgtgtcatgt 42113127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 43481619 - 43481457
Alignment:
Q  72 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctc 171  Q
    ||||||||| |||||||| | ||||||||||| || ||| ||||||| |||||||||||| ||||  |||||||||||||| |||||||||| |||||||    
T  43481619 attttgtccctgtaatttcaaattcttccactcttggtctttcctttaatcacgtcagcacaatctgcataaattacgtccttgtaatttcagattcctc 43481520  T
Q  172 ccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |  || ||||||  |||||||| |||||||| |||||||| |||||| |||||||||||||||    
T  43481519 ctgctcttggtctttgtaattttagattcctccacttttgatccctcgttttacgtgccatgt 43481457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 234
Target Start/End: Complemental strand, 26533020 - 26532926
Alignment:
Q  140 ataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||| ||| |||||||||| | ||||| |||||||||| ||| ||||||||||||||| |||||||  |||||||||||||||| |||||    
T  26533020 ataaattacatccttgtaatttcaaactcctcacacttttggttcctataatttcagattcctccacttttaatccctcattttacgtgtcatgt 26532926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 17622890 - 17623024
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnnttagattttgtccatgtaattttagattcttcc 100  Q
    |||||||||||||||||||||| ||||||||||| ||||| || ||| || ||||||          ||||||||||| | |||||||||||||||||||    
T  17622890 gggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgtaaaaaaagatttagattttgttc-tgtaattttagattcttcc 17622988  T
Q  101 acttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||| |||| || || || |||||||||||||||    
T  17622989 acttttggtccctcattccaccacgtcagcagaatc 17623024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 26137062 - 26136926
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccct-gtnnnnnnnnnnttagattttgtccatgtaattttagattcttc 99  Q
    ||||||||||| |||||||||||||||||||||||||||| || ||| || |||| ||          ||||||||||||| |||||||| |||||||||    
T  26137062 gggtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccctagtaaaaaaaaaattagattttgtccctgtaatttcagattcttc 26136963  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| |||| || || || ||||| |||||||||    
T  26136962 cacttttggtccctcattccaccacgtaagcagaatc 26136926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 21144814 - 21144721
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaattt 161  Q
    ||||||||||||| |||||||| |||||| |||| |||| |||| |  ||| | |||||||||||||||  |||||||||||||||||||||||    
T  21144814 ttagattttgtccttgtaatttcagattcctccatttttcgtcccttatttaaccacgtcagcagaatctgcataaattacgtccctgtaattt 21144721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 10171521 - 10171384
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    ||||||||||| |||||||||||||||||||||| |||||||  ||| || ||||||            ||||||||||||| |||||||||||||||||    
T  10171521 gggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattctt 10171422  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
     ||||||| |||| || || ||||| ||||||||||||    
T  10171421 tcacttttggtccctcattccatcatgtcagcagaatc 10171384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 42112993 - 42113121
Alignment:
Q  9 acctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttccactttta 107  Q
    |||||||||||||||||||||||||| ||||||| |||| || ||||||          || ||||| ||||| |||||||| |||||||| |||||||     
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattatgtccctgtaatttaagattctttcacttttg 42113092  T
Q  108 gtccttcctttcatcacgtcagcagaatc 136  Q
    |||| || ||||| |||||||||||||||    
T  42113093 gtccctcatttcaccacgtcagcagaatc 42113121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 43851665 - 43851801
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt-nnnnnnnnnnttagattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||           ||||||||||||| |||||||| |||||||||    
T  43851665 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaacaaaagatttagattttgtccctgtaatttcagattcttc 43851764  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||  ||| || || || ||| |||||||||||    
T  43851765 cacttttgatccctcattccaccacatcagcagaatc 43851801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 7689901 - 7689764
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| || || |||            ||| ||||||||| |||||||| ||||||||    
T  7689901 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagattctt 7689802  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||  ||| || || || |||||||||||||||    
T  7689801 ccacttttgatccctcattccaccacgtcagcagaatc 7689764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18044205 - 18044164
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  18044205 gggtaaatacctcttttcgtccctgtaatattagcgaattcc 18044164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 21148006 - 21148074
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |  || || |||||||||||||||    
T  21148006 ttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatc 21148074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7689524 - 7689563
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  7689524 gggtaaatacctcttttcgtccctgtaatattagcgaatt 7689563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 42113062 - 42113103
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  42113062 gtccctgtaatttaagattctttcacttttggtccctcattt 42113103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 10108748 - 10108611
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||| |||||||||||||||||||||||||||||  ||||||  ||| || ||||||            ||||||||||||| |||||||| | ||||||    
T  10108748 gggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108649  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| |||| |  || || |||||||||||||||    
T  10108648 ccacttttggtcccttattccaccacgtcagcagaatc 10108611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 10171443 - 10171403
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  10171443 gtccctgtaattttagattctttcacttttggtccctcatt 10171403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 14767576 - 14767644
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| ||||| |||||||||| |||| |  || || |||||||||||||||    
T  14767576 ttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatc 14767644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 14820672 - 14820535
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||| |||||||||||| |||||||||||||||| |||||||  ||| || ||||||            ||||||||||||| |||||||| | ||||||    
T  14820672 gggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 14820573  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| |||| |  || || |||||||||||||||    
T  14820572 ccacttttggtcccttattccaccacgtcagcagaatc 14820535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 26136985 - 26136945
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  26136985 gtccctgtaatttcagattcttccacttttggtccctcatt 26136945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 40486697 - 40486740
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtcc 111  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||    
T  40486697 ttagattctgtccttgtaattttagattattccacttttagtcc 40486740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 211
Target Start/End: Complemental strand, 35368714 - 35368684
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttg 211  Q
    |||||||||||||||||||||||||||||||    
T  35368714 gtccctgtaatttcagattccttcacttttg 35368684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 40487706 - 40487656
Alignment:
Q  86 attttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||||||||||||||||||||||||  || | ||| |||||||||||    
T  40487706 attttagattcttccacttttagtccttcaattgaacacatcagcagaatc 40487656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21147936 - 21147977
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||| |||||||||||| |||||||||||||||| |||||||    
T  21147936 gggttaatacctctttttgtccctgtaatattagcgaattcc 21147977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 22848540 - 22848464
Alignment:
Q  155 gtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccat 232  Q
    |||||||||||||| |  ||||||||||| ||||||||||| |||||| || ||||  | |||||||| |||||||||    
T  22848540 gtaatttcatattcttttcacttttggtctctgtaatttcaaattcctccattttttat-cctcatttcacgtgccat 22848464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 30789519 - 30789564
Alignment:
Q  12 tcttttcgtccctgtaatattagtgaattccaatttcagcccctgt 57  Q
    ||||||||||||||||||||||| ||||||| |||| || ||||||    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgt 30789564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 30789589 - 30789626
Alignment:
Q  185 ctgtaatttcagattccttcacttttggtccctcattt 222  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  30789589 ctgtaatttcagattcctccacttttgatccctcattt 30789626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35367410 - 35367451
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||||||||||| ||||||| |||||||| |||||||    
T  35367410 gggtaaatacctcttttggtccctgcaatattagcgaattcc 35367451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 38726756 - 38726793
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttt 105  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  38726756 ttagattttgtccttgtaatttcagattcttccacttt 38726793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 43481693 - 43481652
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||| ||||||||||| |||||||||||| |||||||    
T  43481693 gggtaaatatctcttttcgtcactgtaatattagcgaattcc 43481652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 7689823 - 7689783
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  7689823 gtccctgtaatttcagattcttccacttttgatccctcatt 7689783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 21148015 - 21148051
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccct 217  Q
    |||||||||||||||||||| | ||||||||||||||    
T  21148015 gtccctgtaatttcagattcttccacttttggtccct 21148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 22494684 - 22494644
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  22494684 gtccctgtaatttcaaattcttccacttttggtccctcatt 22494644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 22494757 - 22494721
Alignment:
Q  5 aaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    |||||||||| |||||||||||||||| |||||||||    
T  22494757 aaatacctctcttcgtccctgtaatatcagtgaattc 22494721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 26532852 - 26532920
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | ||| ||||||||||  ||| || || || |||||||||||||||    
T  26532852 ttagattttgtccctgtaatttcaaatttttccacttttgatccctcattccaccacgtcagcagaatc 26532920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42113359 - 42113327
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatatta 33  Q
    |||||||||| ||||||||||||||||||||||    
T  42113359 gggtaaatacatcttttcgtccctgtaatatta 42113327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42606131 - 42606091
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    ||||||||| ||||||| |||||||||||||||| ||||||    
T  42606131 gggtaaatatctctttttgtccctgtaatattagcgaattc 42606091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 43851742 - 43851782
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  43851742 gtccctgtaatttcagattcttccacttttgatccctcatt 43851782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 41600336 - 41600101
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    ||||||||||||||||| |||||||||||||||| |||||||  ||| || ||||||            ||||||||||||| |||||||| ||||||||    
T  41600336 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 41600237  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||| ||||||||||||||||||| ||||  ||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  41600236 ccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttggtccctgtaatttcagat 41600137  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||| ||||||||||||||||||||||    
T  41600136 tcctccacttttgatccctcattttacgtgccatgt 41600101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 12006918 - 12006683
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||| | ||||||||||| ||||||| |||| || ||||||            ||||||||||||| |||||||| ||||||||    
T  12006918 gggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 12006819  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||| ||||||||||||||||||| ||||  ||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||    
T  12006818 ccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttggtcactgtaatttcagat 12006719  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||| ||||||||||||||||||||||    
T  12006718 tcctccacttttgatccctcattttacgtgccatgt 12006683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 23704662 - 23704896
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| |  | ||||          || | ||||||||| |||||||| |||||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgtaaaaaaaagatttacattttgtccctgtaatttcagattcttc 23704761  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagatt 199  Q
    ||||||| |||| ||||||||||| ||||  ||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23704762 cacttttggtccctcctttcatcaagtcaatagaatctgcataaattacttccctgtaatttcagattcctcccacttttggtccctgtaatttcagatt 23704861  T
Q  200 ccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||| |||||||||||||||||||||||||||||||    
T  23704862 cctccacttttggtccctcattttacgtgccatgt 23704896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 28218541 - 28218320
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||            ||||||||||||| |||||||| ||||||||    
T  28218541 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 28218442  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||| |||||||||||||||| || ||||  ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28218441 ccacttttggtccctcctttcatcacgtcaacaaaatctgcatcaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatttcagat 28218342  T
Q  199 tccttcacttttggtccctcat 220  Q
    | || |||||||||||||||||    
T  28218341 tactccacttttggtccctcat 28218320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 20963871 - 20963638
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    ||||||||||||||||| |||||||||||||||| |||||||  ||| || ||||||          || |||||| |||| |||||||| ||||||||     
T  20963871 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaataaaatttagatttagtccctgtaatttcagattcttt 20963772  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagatt 199  Q
    ||||||| ||||| ||||||||||||||| || |||   |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  20963771 cacttttggtcct-cctttcatcacgtcaacataatttgcataaattacgtccctgtaatttcatattcctcccacttttggtccttgtaatttcatatt 20963673  T
Q  200 ccttcacttttggtccctcattttacgtgccatgt 234  Q
    | | |||||||||||||||||||||||||||||||    
T  20963672 cttccacttttggtccctcattttacgtgccatgt 20963638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 20419845 - 20419679
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||| |||| || ||||  |||||||||||||| |||||||||| |||    
T  20419845 ttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaacaaaatcttcataaattacgtccttgtaatttcagatt 20419746  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  20419745 cctcccacttttggtccctgtaatttcatattcctccacttttggtccctcattttacgtaccatgt 20419679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 20459068 - 20458834
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| ||  |||||            ||||||||||||  |||||||| ||||||||    
T  20459068 gggtaaatacctcttttcgtccctgtaatattagggaattccggttt-agtacctgtaaaaaaaaagatttagattttgtcactgtaatttcagattctt 20458970  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||| |||||| |||| |||| ||||||   ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  20458969 ccacttttggtccctcctttgatcaagtcaacagaatttgcataaattacgtccctgtaatttcagattcctcccgcttttggtccttgtaatttcagat 20458870  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||||||||||||||||||||||||||    
T  20458869 tcctccacttttggtccctcattttacgtgccatgt 20458834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 23383878 - 23383643
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| || |||||             ||||||||||||| |||||||| | ||||||    
T  23383878 gggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23383779  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||| ||| |||| ||||||||||| |||| |||||||  |||||| ||||||| |||||||| | |||||||||||||||||||| |||||||||| ||    
T  23383778 ccacctttggtccctcctttcatcaagtcaacagaatctgcataaactacgtccttgtaattttagattcctcccacttttggtccttgtaatttcaaat 23383679  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||||||||||||||||| |||||    
T  23383678 tccttcacttttggtccctcattttacgtgtcatgt 23383643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 38880033 - 38879867
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |||||||| || |||| |||||||  |||||||||||||||||||||||||||||    
T  38880033 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcaccaagtcaacagaatctgcataaattacgtccctgtaatttcatatt 38879934  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||| || ||||||||||||||| ||  ||||||||||||||||| |||||||||    
T  38879933 cctcccacttttggtctctataatttcagattcctccaaatttggtccctcattttatgtgccatgt 38879867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 48672657 - 48672422
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    ||||||||||||||||||||| |||||||||||| ||||| |  ||| || ||||||            ||||||||| ||| |||||||| ||||||||    
T  48672657 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattctt 48672558  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||| |||||||||||||| |||| ||||  ||| |||||||||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  48672557 ccacttttggtccctcctttcatcacgttagcaaaatctgcatcaattacgtccttgtaatttcaaattcctcccacttttggtccttgtaatttcagat 48672458  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||| ||||||||||||| ||||||||    
T  48672457 tcctccacttttgatccctcattttacatgccatgt 48672422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 10409443 - 10409609
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||| | |||||||||| |||||| ||||  ||| |||||||||| |||||||||| |||    
T  10409443 ttagattttgtccttgtaatttcagattcttctacttttagtcccttctttcatcacttcagcaaaatctgcatcaattacgtccttgtaatttcagatt 10409542  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  10409543 cctcctacttttggtccttgtaatttcagattcctccacttttgatccctcattttacatgccatgt 10409609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 31851548 - 31851382
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | |||||||||||||| |||  |||||||||||| ||||||||||   ||||||||||||||||||||||||| |||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcagatt 31851449  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| || ||||| |||||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  31851448 cctctcaattttgatccctgtaatttcatatttctccacttttggtccctcattttacgtgccatgt 31851382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 70 - 233
Target Start/End: Complemental strand, 7658276 - 7658114
Alignment:
Q  70 agattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcc 169  Q
    ||||||||||| |||||||| |||||||||||||||| |||  ||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||    
T  7658276 agattttgtccctgtaatttaagattcttccacttttggtctctcctttcatcacgtcagcaaaatctgcataaattatgtccctgtaatttcatattcc 7658177  T
Q  170 tcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatg 233  Q
    ||||||||||||| ||| ||||||||||||| |  |||||| ||||||||||||||||| ||||    
T  7658176 tcccacttttggt-cctttaatttcagattcatctacttttagtccctcattttacgtgacatg 7658114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 6465923 - 6466077
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||| ||| | |||||||| |||||||||||||||| |||| ||||||||||||||||| ||||||  ||||||||| ||||||||||||||| |||    
T  6465923 ttagattatgttcttgtaatttcagattcttccacttttggtccctcctttcatcacgtcagaagaatctgcataaattatgtccctgtaatttcaaatt 6466022  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    ||||||||||||| |||||||||||||| ||| || |||||||||||||||||||    
T  6466023 cctcccacttttgatccctgtaatttcatattactccacttttggtccctcattt 6466077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 234
Target Start/End: Complemental strand, 44817142 - 44816978
Alignment:
Q  70 agattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcc 169  Q
    ||||||||||| | |||||| | |||||| ||||||| |||| || |||||||| ||||  ||||||  |||||||||||| | |||| ||||| |||||    
T  44817142 agattttgtccttataatttcatattctttcacttttggtccctcttttcatcaagtcaatagaatctgcataaattacgtacatgtagtttcaaattcc 44817043  T
Q  170 tcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44817042 ttccacttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtgccatgt 44816978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 1250515 - 1250349
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| | |||||| | |||||||||||||| |||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||    
T  1250515 ttagattttgtccctttaatttcatattcttccacttttggtccctcctttcatcacgtcagaagaatctgcataaattacgtccctgtaatttcaaatt 1250416  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| | |||||||| |||||||| || |||||| |||||||  ||| ||||||||| || |||||    
T  1250415 cctcctatttttggtcactgtaattccatattcctccacttttaatccttcattttacatgacatgt 1250349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 33162651 - 33162770
Alignment:
Q  115 ctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtc 214  Q
    ||||||||||||||| ||||||   ||||||||||| | |||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  33162651 ctttcatcacgtcagtagaatctgtataaattacgttcttgtaatttcaaattccttccacttttggtccgtgtaatttcagattacttcacttttggtc 33162750  T
Q  215 cctcattttacgtgccatgt 234  Q
    |||||||||| |||||||||    
T  33162751 cctcattttatgtgccatgt 33162770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 25772709 - 25772523
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    ||||||||| |||||||||||||| |||||||||||||||||| ||| || ||||||            ||||||||||||| |||||||| ||||||||    
T  25772709 gggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 25772610  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccct 186  Q
    | |||||| |||| ||||||||||| |||| |||||||  |||||||||||||| |||||||||| |||||| |||||||||||||||    
T  25772609 ctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcct-ccacttttggtccct 25772523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 48648538 - 48648421
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    |||||||||||| |||||||||||||||||||||||| | |||| |||||||||||||||| |||||||  ||||||||||||||||||||||||| |||    
T  48648538 ttagattttgtctatgtaattttagattcttccacttctggtccctcctttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagatt 48648439  T
Q  168 cctcccacttttggtccct 186  Q
    ||| ||| |||||||||||    
T  48648438 cct-ccaattttggtccct 48648421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 24194941 - 24195014
Alignment:
Q  149 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  24194941 gtccctgtaatttcagattcctctcacttttggtccctataatttcagattcctccacttttggtccctcattt 24195014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 12006541 - 12006677
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt-nnnnnnnnnnttagattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| || ||||||           ||||||||||||| |||||||| |||||||||    
T  12006541 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaattagattttgtccctgtaatttcagattcttc 12006640  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||  ||| || || || ||||| |||||||||    
T  12006641 cacttttgatccctcattccaccacgttagcagaatc 12006677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 28218178 - 28218316
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn---ttagattttgtccatgtaattttagattct 97  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||             ||||||||||||| |||||||| |||||||    
T  28218178 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 28218277  T
Q  98 tccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||| |||| || || || |||||||||||||||    
T  28218278 tccacttttggtccctcattccaccacgtcagcagaatc 28218316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 38879723 - 38879861
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn---ttagattttgtccatgtaattttagattct 97  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||  |||||             ||||||||||||| |||||||| | |||||    
T  38879723 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 38879822  T
Q  98 tccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||| |||| || || || ||||| |||||||||    
T  38879823 tccacttttggtccctcattccaccacgtaagcagaatc 38879861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 25772559 - 25772506
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  25772559 gtccttgtaatttcagattcctccacttttggtccctcattttacgtaccatgt 25772506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 48648457 - 48648404
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||||||||| || |||||||||||| |||||||||||||||    
T  48648457 gtccctgtaatttcagattcctccaattttggtccctccttttacgtgccatgt 48648404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 7658040 - 7658108
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| |||||||||||||| | |||||| ||||||| |||| ||||||||||||||||||| ||||    
T  7658040 ttagattatgtccatgtaatttcaaattcttacacttttggtccatcctttcatcacgtcagcaaaatc 7658108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 48672277 - 48672316
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48672277 gggtaaatacctcttttcgtccctgtaatattagtgaatt 48672316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 10409751 - 10409615
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||| ||| ||||||||||| ||||||| |||| || ||||||          || ||||||||||  ||||||||||||||||||    
T  10409751 gggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtctctgtaattttagattcttc 10409652  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||  ||| || || || ||||| |||||||||    
T  10409651 cacttttgatccctcattccaccacgttagcagaatc 10409615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 23705038 - 23704902
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt-nnnnnnnnnnttagattttgtccatgtaattttagattcttc 99  Q
    ||||||||||||||||||||| |||||||||||| |||||||  ||| || ||||||           ||||||||||||| |||||||| | |||||||    
T  23705038 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 23704939  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| |||| || || || ||||| |||||||||    
T  23704938 cacttttggtccctcattccaccacgtaagcagaatc 23704902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 16995268 - 16995336
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||  | || || |||||||||||||||    
T  16995268 ttagattttgtccctgtaatttcagattcttccacttttggtcccacattccaccacgtcagcagaatc 16995336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 24195105 - 24195037
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || |||||||| |||||||||    
T  24195105 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccatcacgtaagcagaatc 24195037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24195250 - 24195210
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  24195250 gggtaaatacctcttttcgtccctgtaatattagcgaattc 24195210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 25772364 - 25772403
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  25772364 gggtaaatacctcttttcgtccctgtaatattagcgaatt 25772403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 33162830 - 33162776
Alignment:
Q  82 tgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| | |||||||||||||||||| ||| ||||| |||||||||||||||    
T  33162830 tgtaatttcaaattcttccacttttagtctttcatttcaccacgtcagcagaatc 33162776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20419536 - 20419577
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  20419536 gggtaaatacctcttttcgtccctataatattagcgaattcc 20419577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 20963494 - 20963607
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt---nnnnnnnnnnttagattttgtccatgtaattttagattct 97  Q
    ||||||||| || |||||||||||||||||||||||||||| | ||| || ||||||             |||||||| |||| ||||||||||||||||    
T  20963494 gggtaaatatctattttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaaaagatttagatttagtccctgtaattttagattct 20963593  T
Q  98 tccacttttagtcc 111  Q
    ||||||||| ||||    
T  20963594 tccacttttggtcc 20963607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23383499 - 23383540
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  23383499 gggtaaatacttcttttcgtctctgtaatattagtgaattcc 23383540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38880099 - 38880058
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||||||||||||||||||||||||||||  ||||||    
T  38880099 gggtaaatacctcttttcgtccctgtaatattagcaaattcc 38880058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 44816907 - 44816972
Alignment:
Q  71 gattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||||| |||||||| |||||||||||||||| |||| || || || ||||| |||||||||    
T  44816907 gattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatc 44816972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 20458760 - 20458828
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||  |||||||| |||||||||||||||| |||| || || || ||||| |||||||||    
T  20458760 ttagattttgtcgctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatc 20458828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 28218257 - 28218297
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  28218257 gtccctgtaatttcagattcttccacttttggtccctcatt 28218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 44816913 - 44816953
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  44816913 gtccctgtaatttcagattcttccacttttggtccctcatt 44816953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 33
Target Start/End: Complemental strand, 7658342 - 7658311
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatatta 33  Q
    ||||||||||||||||||||||||||||||||    
T  7658342 ggtaaatacctcttttcgtccctgtaatatta 7658311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16995200 - 16995239
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||||||||||||||| |||||||||||| |||||    
T  16995200 gggtaaatacctcttttcgtctctgtaatattagcgaatt 16995239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 33162914 - 33162875
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||||||||||||||| |||||||||||| |||||    
T  33162914 gggtaaatacctcttttcgtctctgtaatattagcgaatt 33162875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 41599958 - 41599997
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  41599958 gggtaaatacctcttttcatccctgtaatattagcgaatt 41599997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 31851242 - 31851280
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  31851242 ggtaaatacctcttttcgtccttttaatattagtgaatt 31851280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20419915 - 20419874
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||||||||||| |||||||||||||||  |||||||    
T  20419915 gggtaaatacctctttttgtccctgtaatattaacgaattcc 20419874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 1250279 - 1250343
Alignment:
Q  72 attttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||| | ||||||||||||||||||||||| |||  || || || ||||||||| |||||    
T  1250279 attttgtccttttaattttagattcttccacttttggtctctcattccaccacgtcagctgaatc 1250343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 7657972 - 7658008
Alignment:
Q  4 taaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  7657972 taaatacctcttttcgtccatgtaatattagcgaatt 7658008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 12006618 - 12006658
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  12006618 gtccctgtaatttcagattcttccacttttgatccctcatt 12006658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 16995277 - 16995317
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||| | ||||||||||||| ||||    
T  16995277 gtccctgtaatttcagattcttccacttttggtcccacatt 16995317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 20419605 - 20419673
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | ||||||||| |||| |||| || || || ||||| |||||||||    
T  20419605 ttagattttgtccctgtaatttcatattcttccatttttggtccctcattccaccacgtaagcagaatc 20419673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 20458773 - 20458809
Alignment:
Q  185 ctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||| | ||||||||||||||||||    
T  20458773 ctgtaatttcagattcttccacttttggtccctcatt 20458809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 20963573 - 20963613
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||| |||||| | ||||||||||||||||||    
T  20963573 gtccctgtaattttagattcttccacttttggtccctcatt 20963613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 23704961 - 23704921
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  23704961 gtccctgtaatttcatattcttccacttttggtccctcatt 23704921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 25772432 - 25772500
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | ||||||||||||||  ||| || || || ||||| |||||||||    
T  25772432 ttagattttgtccttgtaatttcatattcttccacttttgttccctcattccaccacgtaagcagaatc 25772500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31852208 - 31852176
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatatta 33  Q
    |||| ||||||||||||||||||||||||||||    
T  31852208 gggttaatacctcttttcgtccctgtaatatta 31852176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 38879802 - 38879842
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  38879802 gtccctgtaatttcatattcttccacttttggtccctcatt 38879842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 41600027 - 41600095
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| |||||||||||| |||  ||| || || || ||||| |||||||||    
T  41600027 ttagattttgtccctgtaatttcagattcttccacatttgatccctcattccaccacgttagcagaatc 41600095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 48648339 - 48648379
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||  |||| |||||||||||||||    
T  48648339 gtccctgtaatttcagattttttcatttttggtccctcatt 48648379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 48672348 - 48672416
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| |||  |||||||| ||||||||||||||||  ||| || || || |||||||||||||||    
T  48672348 ttagatttcgtctctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcagaatc 48672416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 234
Target Start/End: Original strand, 17606307 - 17606543
Alignment:
Q  4 taaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn------ttagattttgtccatgtaattttagattct 97  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| || ||||||                ||||||||||| | |||||||| | |||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcctgtaatttcatattct 17606406  T
Q  98 tccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcaga 197  Q
    ||||||||| |||| || |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  17606407 tccacttttggtccctcatttcatcacgtcagcagaatctgtataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaa 17606506  T
Q  198 ttccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17606507 ttcctccacttttggtccctcattttacgtgccatgt 17606543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 39711141 - 39711307
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |||||| |||||||||||||||||  |||||||||||||| ||||||||||||||    
T  39711141 ttagattttgtccttgtaatttcatattcttccacttttggtccctcctttaatcacgtcagcagaatctgcataaattacgtccttgtaatttcatatt 39711240  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  39711241 cctcccgcttttggtccctgtaatttcggattcctccacttttggtccctcattttacgtgccatgt 39711307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 24467629 - 24467862
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||| || ||||||          || ||||||||||| |||||||| |||||||||    
T  24467629 gggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttc 24467728  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagatt 199  Q
    ||||||| |||| ||||||||||| ||||  ||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  24467729 cacttttggtccctcctttcatcaagtcattagaatctgcataaattacgtcattgtaatttcatattcctcccacttttggtccctgtaatttcagatt 24467828  T
Q  200 ccttcacttttggtccctcattttacgtgccatgt 234  Q
     || ||| |||||| ||||||||||||||||||||    
T  24467829 actccacatttggt-cctcattttacgtgccatgt 24467862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 33628996 - 33628833
Alignment:
Q  71 gattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcct 170  Q
    |||||||||| |||||||| |||||||||||||||| |||| |||||| |||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  33628996 gattttgtccctgtaatttcagattcttccacttttggtccctcctttaatcacgtcagcagaatctacataaattatgtccctgtaatttcaaattcct 33628897  T
Q  171 cccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  33628896 cccgcttttggtccctgtaatttcagattcctctacttttggtccctcattttacgtgccatgt 33628833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 4907340 - 4907105
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    ||||||||| || ||||| ||||||||||||||| |||||||| ||| || ||||||            ||||||||||||| |||||||| ||||||||    
T  4907340 gggtaaatatctattttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattctt 4907241  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  4907240 ccacttttggtccctcctttcatcacgtcagtagaatctgcataaattacgtccctgtaatttcagattcctcctacttttggtccctgtaatttcagat 4907141  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    || | ||||||| |||||||||||||| ||||||||    
T  4907140 tcatccacttttagtccctcattttacatgccatgt 4907105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 43539416 - 43539582
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||| | |||    
T  43539416 ttagattttgtccctgtaattttatattgttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaattttagatt 43539515  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  43539516 cctcccacttttgctccctgtaatttcaaattcctccacttttggtacctcattttacgtgtcatgt 43539582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 30299300 - 30299466
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | |||||||||||||| |||  ||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||    
T  30299300 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatcaagtcaacagaatctccataaattacgtccctgtaatttcagatt 30299399  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||| || | ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  30299400 cctcccacttttagttcttgtaatttcagattcctccacttttggtccctcattttatgtgccatgt 30299466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 48072030 - 48072196
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | ||| ||||||||||  ||| |||||||||||| ||||||||||   ||||||||||||||||||||||||| |||    
T  48072030 ttagattttgtccctgtaatttcatattattccacttttgctccctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcaaatt 48072129  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  48072130 cctcccacttttgatccctgtaatttcagattcctccacttttggtccctcattttacgtgacatgt 48072196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 39970954 - 39970789
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||| | ||||||||||||||||||||||| ||||||||  ||||||| ||||| | |||    
T  39970954 ttagattttgtccctgtaattttagatccttccacttttggtcccttctttcatcacgtcagcagaatccgcataaattgtgtccctgaaattttagatt 39970855  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||||||||||||    
T  39970854 cctcccacttttggt-catgtaatttcagattcatccacttttggtccctcattttacgtgccatgt 39970789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 42510307 - 42510157
Alignment:
Q  84 taattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtc 183  Q
    |||||| |||||||||||||| || ||| || |||||||||||||||||||||  ||||||||||  ||||||||||||| |||||||||||||||||||    
T  42510307 taatttcagattcttccacttgtattccctcatttcatcacgtcagcagaatctgcataaattacacccctgtaatttcagattcctcccacttttggtc 42510208  T
Q  184 cctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  42510207 cctgtaatttcagattcctccacttttggtccctcatttcacgtgccatgt 42510157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 77 - 234
Target Start/End: Original strand, 20995747 - 20995903
Alignment:
Q  77 gtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccact 176  Q
    |||| |||||||||| |||||| ||||||| |||| | ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  20995747 gtccctgtaattttatattctttcacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccact 20995846  T
Q  177 tttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||| ||||||||||||||| ||| || |||||||||||||||| ||||||||||||||    
T  20995847 tttcgtccctgtaatttcaaatttctccacttttggtccctca-tttacgtgccatgt 20995903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 18462286 - 18462519
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||          || ||||||||||| |||||||| |||||||||    
T  18462286 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttc 18462385  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagatt 199  Q
    || |||| |||| ||||||||||| ||||  ||||||  |||||||||||||  ||||||||||||||||||||||||||||||||| |||||||| |||    
T  18462386 catttttggtccctcctttcatcaagtcattagaatctgcataaattacgtcattgtaatttcatattcctcccacttttggtccctataatttcatatt 18462485  T
Q  200 ccttcacttttggtccctcattttacgtgccatgt 234  Q
     || ||| |||||| ||||||||| ||||||||||    
T  18462486 actccacgtttggt-cctcattttgcgtgccatgt 18462519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 29696565 - 29696793
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||||||||||||||| ||||| |  ||| || | ||||          || |||||||||||  ||||||| | |||||||    
T  29696565 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaagatttagattttgtccccgtaatttcatattcttc 29696664  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagatt 199  Q
    ||||||| |||  |||||||||||| || ||||||||  ||||||||| |||||| |||||||||||||||||||| ||||||||||||| |||||||||    
T  29696665 cactttttgtcactcctttcatcacatcggcagaatctgcataaattatgtccctataatttcatattcctcccac-tttggtccctgtattttcagatt 29696763  T
Q  200 ccttcacttttggtccctcattttacgtgc 229  Q
    ||| ||||||||||||||||||||||||||    
T  29696764 cctccacttttggtccctcattttacgtgc 29696793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 39826424 - 39826193
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||| ||||||||||| ||||| |  ||| || ||||||            ||||||||||||| |||||||| ||||||||    
T  39826424 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 39826325  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    |||||||| |    ||||||||||||||||||| ||||  ||| |||||||||| |||||||| | |||||||||||||||| |||||||||||||| ||    
T  39826324 ccacttttgg----tcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaattttagattcctcccacttttgatccctgtaatttcatat 39826229  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||| ||||||||||||||||||||||    
T  39826228 tcctccacttttgatccctcattttacgtgccatgt 39826193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 52058317 - 52058154
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||| ||||| |||||||| |||||||||||||||| |||| |||||||||||||||||   ||||  |||||||||||||||| | |||||| |||    
T  52058317 ttagattatgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcag---aatctgcataaattacgtccctatgatttcagatt 52058221  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||| |||||||||| ||| || ||||||||||||||||||||||||| |||||    
T  52058220 cctcccacttttggtccttgtaatttcatattactccacttttggtccctcattttacgtgtcatgt 52058154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 234
Target Start/End: Original strand, 13229803 - 13229966
Alignment:
Q  70 agattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcc 169  Q
    ||||||||| | |||||||| | ||||||||||||||  ||  ||||||||||| |||| || ||||  ||||||||||||||||||||||||| |||||    
T  13229803 agattttgtgcttgtaatttcatattcttccacttttgatcactcctttcatcaagtcaacataatctgcataaattacgtccctgtaatttcagattcc 13229902  T
Q  170 tcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    || |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  13229903 tctcacttttggt-cctgtaatttcagattcctccacttttggtccctcattttgcgtgtcatgt 13229966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 8292873 - 8293042
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| || ||||| | |||||||||||||| || | || |||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  8292873 ttagattttgtccctgaaatttcatattcttccacttttggttcctcttttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt 8292972  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcactt---ttggtccctcattttacgtgccatgt 234  Q
    ||||| ||||||||||| |||||||| |||||||| |||||   || |||||||||||| | ||||||||    
T  8292973 cctcctacttttggtccatgtaattttagattcctccactttaattagtccctcatttttcatgccatgt 8293042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 34749414 - 34749297
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||| ||| |||||||| |||||||||||||||| || | |||||| |||||||||||||||||  |||||||||| |||||||||||||| |||    
T  34749414 ttagattttatccctgtaatttcagattcttccacttttggtacctcctttaatcacgtcagcagaatctgcataaattacatccctgtaatttcagatt 34749315  T
Q  168 cctcccacttttggtccct 186  Q
    ||| |||||||||||||||    
T  34749314 cct-ccacttttggtccct 34749297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 7474002 - 7473935
Alignment:
Q  167 tcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  7474002 tcctcccacttttggtccttgtaatttcagattcctccacttttgatccatcatttcacgtgccatgt 7473935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 16294256 - 16294138
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | |||| ||||||||| |||| |  ||| | || ||||||||||||  |||||||||||||||||||||||   |||    
T  16294256 ttagattttgtccttgtaatttcatattcctccacttttggtcccttatttaaccatgtcagcagaatctacataaattacgtccctgtaatttatgatt 16294157  T
Q  168 cctcccacttttggtccct 186  Q
    ||  |||||||||||||||    
T  16294156 ccatccacttttggtccct 16294138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 4906962 - 4907099
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| || ||||||            ||||||||||||| |||||||| | ||||||    
T  4906962 gggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattctt 4907061  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| |||| || || || ||||||||| |||||    
T  4907062 ccacttttggtccctcattccaccacgtcagccgaatc 4907099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 17606684 - 17606574
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnnttagattttgtccatgtaattttagattcttcc 100  Q
    |||| ||||||||||||||||||||||||||||| |||||||  ||| || ||||||          ||||||||||||| |||||||| ||||||||||    
T  17606684 gggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaagatttagattttgtccttgtaatttcagattcttcc 17606585  T
Q  101 acttttagtcc 111  Q
    |||||| ||||    
T  17606584 acttttggtcc 17606574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 34749332 - 34749280
Alignment:
Q  182 tccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  34749332 tccctgtaatttcagattcctccacttttggtccctcattttacatgccatgt 34749280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 228
Target Start/End: Complemental strand, 215149 - 215061
Alignment:
Q  140 ataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtg 228  Q
    ||||||||||||  |||||||||| ||| ||| |||||| ||||| |||||||| |||||||| |||||||||||  |||||| |||||    
T  215149 ataaattacgtcattgtaatttcagatttctctcactttcggtccgtgtaatttaagattcctccacttttggtcattcatttcacgtg 215061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 24467936 - 24467868
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| || ||||| |||||||| ||||||    
T  24467936 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagtagaatc 24467868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 29696867 - 29696799
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||||||||||||||||| |||||||||||||||| |||| || || || ||||| |||||||||    
T  29696867 ttagattttgtccatgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatc 29696799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 42510083 - 42510151
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| || ||||| ||| |||||||||||    
T  42510083 ttagattttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacatcagcagaatc 42510151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 30299540 - 30299472
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| || || || ||||| || ||||||    
T  30299540 ttagattttgtccctgtaattttagattcttccacttttggtccctcattccaccacgtaagaagaatc 30299472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33628690 - 33628730
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  33628690 gggtaaatacctcttttcgtccctgtaatattagcgaattc 33628730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39711450 - 39711410
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  39711450 gggtaaatacctcttttcgtccctgtaatattagcgaattc 39711410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 39970715 - 39970783
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||||||| ||||||||| |||||||||||||||| |||| || || || |||||||||| ||||    
T  39970715 ttagattttgtctatgtaatttcagattcttccacttttggtccctcattccaccacgtcagcaaaatc 39970783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 52058386 - 52058347
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  52058386 gggtaaatacctcttttcgtccctgtaatattagcgaatt 52058347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 30780348 - 30780270
Alignment:
Q  93 attcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctc 171  Q
    |||| |||||||||  |||||| ||  |||||||||||||||||   ||||||||||||  ||||||||||||||||||    
T  30780348 attcctccacttttgatccttcattcaatcacgtcagcagaatctgtataaattacgtcattgtaatttcatattcctc 30780270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 24467927 - 24467886
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  24467927 gtccctgtaatttcagattcttccacttttggtccctcattt 24467886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30299232 - 30299265
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattag 34  Q
    ||||||||||||||||||||||||||||||||||    
T  30299232 gggtaaatacctcttttcgtccctgtaatattag 30299265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 48072339 - 48072298
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  48072339 gggtaaatacctcttttcgtcattgtaatattagtgaattcc 48072298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 52058089 - 52058130
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  52058089 gtccctgtaatttcagattcttccacttttggtccctcattt 52058130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 18342395 - 18342261
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnnttagattttgtccatgtaattttagattcttcc 100  Q
    |||||||||||| ||||||||||||||||||||| ||||| |  ||| || ||||||          ||| ||||| | | |||||||| | ||||||||    
T  18342395 gggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatttaaattttattcttgtaatttcatattcttcc 18342296  T
Q  101 acttttagtccttcctttcatcacgtcagcagaat 135  Q
    ||||||||||| || || || ||||| ||||||||    
T  18342295 acttttagtccctcattccaccacgtaagcagaat 18342261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 18462593 - 18462525
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||||||||  ||||||| |||||||||||||||| |||  || ||||| ||||||| |||||||    
T  18462593 ttagattttgtccccgtaatttcagattcttccacttttggtctctcatttcaccacgtcaacagaatc 18462525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 33628768 - 33628808
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  33628768 gtccccgtaatttcagattctttcacttttggtccctcatt 33628808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 39826119 - 39826187
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| ||||||||||||||||  ||| || || || ||||| |||||||||    
T  39826119 ttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgttagcagaatc 39826187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 52058088 - 52058148
Alignment:
Q  76 tgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||| |||||||| |||||||||||||||| |||| || ||||| ||| |||||||||||    
T  52058088 tgtccctgtaatttcagattcttccacttttggtccctcatttcaccacatcagcagaatc 52058148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39970645 - 39970691
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaattt 47  Q
    |||||||||||||||||||||| ||||||||||  ||||| ||||||    
T  39970645 gggtaaatacctcttttcgtccatgtaatattaacgaatttcaattt 39970691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 17502030 - 17501993
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctc 218  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  17502030 gtccctgtaatttcagattcctccacttttagtccctc 17501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20995698 - 20995739
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||| || |||||||||||| |||||||    
T  20995698 gggtaaatacctcttttcatctctgtaatattagcgaattcc 20995739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27039638 - 27039679
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||| |||||||||||||||||||||||||| || |||||||    
T  27039638 gggttaatacctcttttcgtccctgtaatatgagcgaattcc 27039679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33629068 - 33629027
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||| |||||||||||| |||||||||||||||| |||||||    
T  33629068 gggttaatacctctttttgtccctgtaatattagcgaattcc 33629027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 52058011 - 52058052
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||||||| ||||||||||  |||||||    
T  52058011 gggtaaatacctcttttcgtccttgtaatattaacgaattcc 52058052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 4907040 - 4907080
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  4907040 gtccctgtaatttcatattcttccacttttggtccctcatt 4907080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 8293116 - 8293048
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || || |||||| |||||    
T  8293116 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccatgtcagccgaatc 8293048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 8293107 - 8293067
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  8293107 gtccctgtaatttcatattcttccacttttggtccctcatt 8293067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8293186 - 8293154
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatatta 33  Q
    |||||||||||||||||||||||| ||||||||    
T  8293186 gggtaaatacctcttttcgtccctataatatta 8293154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 17502039 - 17501971
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| ||||| |||||||| |||||| |||||||||||||| || ||| | |  ||||||||||||    
T  17502039 ttagattctgtccctgtaatttcagattcctccacttttagtccctcgtttaaccctgtcagcagaatc 17501971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 20995977 - 20995909
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||  |||||||| | |||||||||||||| |||| |  || || |||||||||||||||    
T  20995977 ttagattttgtctctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatc 20995909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 29696858 - 29696818
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||| ||||||||||||||| | ||||||||||||||||||    
T  29696858 gtccatgtaatttcagattcttccacttttggtccctcatt 29696818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 30299531 - 30299491
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||| |||||| | ||||||||||||||||||    
T  30299531 gtccctgtaattttagattcttccacttttggtccctcatt 30299491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34749138 - 34749178
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    |||||||||| ||||||| ||||||||||||||| ||||||    
T  34749138 gggtaaatacatcttttcatccctgtaatattagcgaattc 34749178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 39826050 - 39826106
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt 57  Q
    |||||||||||||||||||||| | ||||||||| ||||| | |||| || ||||||    
T  39826050 gggtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgt 39826106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 39826128 - 39826168
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  39826128 gtccctgtaatttcagattcttccacttttgatccctcatt 39826168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39971024 - 39970992
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatatta 33  Q
    |||||||||||||||||||||| ||||||||||    
T  39971024 gggtaaatacctcttttcgtccatgtaatatta 39970992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 48072270 - 48072202
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| ||||| |||||||| | |||||||||||||| |  | || ||||| |||||||||||||||    
T  48072270 ttagattatgtccctgtaatttcatattcttccacttttgggtcctcatttcaccacgtcagcagaatc 48072202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 119; Significance: 7e-61; HSPs: 3)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 1479 - 1645
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||| ||||| |||||||| |||||||||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||| |||||||| |||    
T  1479 ttagattatgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcagaatctacataaattacgtccctataatttcagatt 1578  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||    
T  1579 cctcccacttttggtccttgtaatttcagattactccacttttggtccctcattttacgtgccatgt 1645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1784 - 1743
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||| ||||||||||||||||||||||||  |||||||    
T  1784 gggtaaatccctcttttcgtccctgtaatattaacgaattcc 1743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 1719 - 1651
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| ||||| |||||||| |||||||||||||||| |||| ||   ||| ||| |||||||||||    
T  1719 ttagattatgtccttgtaatttcagattcttccacttttggtccctcacatcaccacatcagcagaatc 1651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 46046801 - 46046567
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||| ||||||||||||||||||||| |||||||  ||| || ||||||            ||||||||||||| |||||||| ||||||||    
T  46046801 gggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 46046703  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    ||||||||  ||| ||||||||||||||||||| ||||  ||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  46046702 ccacttttgatccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttggtccctgtaatttcagat 46046603  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||| ||||||||||||||||||||||    
T  46046602 tcctccacttttgatccctcattttacgtgccatgt 46046567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 37013084 - 37012850
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn-ttagattttgtccatgtaattttagattcttc 99  Q
    ||||||||||||| |||||||||||||||||||| ||||||   ||| || ||||||           ||||||||||||| |||||||| | |||||||    
T  37013084 gggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaaaattagattttgtccctgtaatttcatattcttc 37012985  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagatt 199  Q
    ||||||| |||  ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| |||    
T  37012984 cacttttggtcactcctttcatcacgtcagcaaaatctgcataaattacgtccctgtaatttcatattcttcctacttttggtccttgtaatttcaaatt 37012885  T
Q  200 ccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||| |||||||||||||||||||||||||||||||    
T  37012884 cctccacttttggtccctcattttacgtgccatgt 37012850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 4 - 234
Target Start/End: Original strand, 9396702 - 9396934
Alignment:
Q  4 taaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattcttcca 101  Q
    ||||||||||||||||||||||||||||||| ||||| | |||| || | ||||            ||||||||||||| | |||||| | ||| |||||    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttcaaatttttcca 9396801  T
Q  102 cttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattcc 201  Q
    ||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  9396802 cttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccacttttgatccctgtaatttcatattcc 9396901  T
Q  202 ttcacttttggtccctcattttacgtgccatgt 234  Q
    | ||||||||||||||||||||||||| |||||    
T  9396902 tccacttttggtccctcattttacgtgtcatgt 9396934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 3018081 - 3018247
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||| || |||||||||| |||    
T  3018081 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacggccttgtaatttcacatt 3018180  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||    
T  3018181 cctcccacttttggtccctataatttcaaattcctccacttttggtccctcattttacgtgtcatgt 3018247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 34064291 - 34064125
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||  |||||||| |||||||||||||||| |||| | ||||||||||||||||||||||  |||||||||||||| |||||||||| |||    
T  34064291 ttagattttgtctctgtaatttcagattcttccacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagatt 34064192  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  34064191 cctcctacttttggtccctgtaatttcagattcctccacttttagtccctcattttacatgccatgt 34064125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 68 - 227
Target Start/End: Complemental strand, 9516919 - 9516760
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||| |||| || ||||  |||||||||||||| |||||||||| |||    
T  9516919 ttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaacaaaatctacataaattacgtccttgtaatttcagatt 9516820  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgt 227  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9516819 cctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgt 9516760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 68 - 231
Target Start/End: Original strand, 9619049 - 9619211
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||  ||||||| |||||||||||||||||||||    
T  9619049 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgcataaat-acgtccctgtaatttcatatt 9619147  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgcca 231  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  9619148 cctcccatttttggtccctgtaatttcagattcctccacttttgctccctctttttacgtgcca 9619211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 7819083 - 7819249
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| |||||||||||||||| || | |||||||||||||| || | ||||  ||| |||||||||| |||||||||| |||    
T  7819083 ttagattttgtccctgtaatttcagattcttccacttttggttcctcctttcatcacgttagtaaaatctgcatcaattacgtccatgtaatttcagatt 7819182  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  7819183 cctcccacttttggtccatgtaatttcatattcctccacttttggtccctcattttacgtgccatgt 7819249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 15640784 - 15640950
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | |||||| ||||||| |||| |||||||||||| ||||||||||   ||||||||||||||||||||||||| |||    
T  15640784 ttagattttgtccctgtaatttcatattctttcacttttggtccctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcagatt 15640883  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  15640884 cctcccacttttgatccttgtaatttcagattcctccacttttggtccatcattttacgtgtcatgt 15640950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 31090439 - 31090204
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    ||||||||| |||||||||||||||||||||||| ||||| | |||| || ||||||            ||||||||||||| |||||||| ||||||||    
T  31090439 gggtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattctt 31090340  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    | |||||| |||| ||||||||||| ||||  ||||||  |||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||    
T  31090339 ctacttttggtccctcctttcatcaagtcaatagaatctacataaattacgtccttgtaatttcagatttctcccacttttggtccccgtaatttcagat 31090240  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||||||| ||||||||||| ||||||    
T  31090239 tcctccacttttggtccttcattttacgtaccatgt 31090204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 38574277 - 38574111
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| |||||||||||||||| || ||||  ||| |||| |||||||||||||||| |||    
T  38574277 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcaacaaaatctgcatcaattgcgtccctgtaatttcagatt 38574178  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  38574177 cctcccacttttggtctctgtaatttcatattcctccacttttggtccctcattttacatgccatgt 38574111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 4355950 - 4356116
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    |||||||||||| ||||||||| | |||||| ||||||| |||| || ||||||||||| |||||||||  |||||||||||||| |||||||||| |||    
T  4355950 ttagattttgtctatgtaatttcatattctttcacttttggtccctcatttcatcacgttagcagaatctgcataaattacgtccttgtaatttcagatt 4356049  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| ||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  4356050 cctcctacttttggtccttgtaatttcaaattcctccacttttggtccctcattttacgtgtcatgt 4356116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 3273621 - 3273855
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt---agattttgtccatgtaattttagattct 97  Q
    ||||||||| |||||||||||||||||||||||| ||||||| |||| || ||| ||          ||   ||||||||||| |||||||| | |||||    
T  3273621 gggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatattct 3273720  T
Q  98 tccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcaga 197  Q
    ||||||||| |||| ||||||||||| ||||  ||||||  |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  3273721 tccacttttggtccctcctttcatcaagtcattagaatctgcataaattacgtccttgtaatttcatattcctcccacttttggt-cctgtaatttcaga 3273819  T
Q  198 ttccttcacttttggtccctcattttacgtgccatgt 234  Q
    || || ||| |||||| ||||||||||||||||||||    
T  3273820 ttactccacgtttggt-cctcattttacgtgccatgt 3273855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 68 - 231
Target Start/End: Original strand, 31944019 - 31944182
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | |||||||||||||| |||  |||||||||||||||| || || |  ||| ||||| |||| |||||||||| |||    
T  31944019 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatcacgtcaacaaaacctgcatcaattatgtccatgtaatttcagatt 31944118  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgcca 231  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  31944119 cctcccacttttggtccatgtaatttcagattcctccacttttggtccctcattttacgtgcca 31944182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 48580175 - 48580009
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | ||| |||||||||| |||| |||||||||||| | ||||||||   |||||||||||||| |||||||||| |||    
T  48580175 ttagattttgtccctgtaatttcatattgttccacttttggtccctcctttcatcaccttagcagaatatgcataaattacgtccttgtaatttcaaatt 48580076  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||| || |||||||| |||||| |||||||| ||||||||||||||||||||||    
T  48580075 cctcccacttttggtctctctaatttcaaattcctccacttttgctccctcattttacgtgccatgt 48580009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 18667387 - 18667524
Alignment:
Q  97 ttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcag 196  Q
    |||||||||| |||| |||||||||||||||| || ||||  ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |     
T  18667387 ttccacttttggtccctcctttcatcacgtcaacaaaatctgcataaattacgtccctgtaatttcagattcctccaacttttggtccctgtaattttaa 18667486  T
Q  197 attccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||| |||||||||||||||||||||||||||||||    
T  18667487 attcctccacttttggtccctcattttacgtgccatgt 18667524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 18713029 - 18713188
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| | ||| ||||| |||| |||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||    
T  18713029 ttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctgcataaattacgtccctgtaatttcagatt 18713128  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgt 227  Q
    |||||| |||||||||| |||||||||| ||||||  ||||||||||||||| |||||||    
T  18713129 cctccctcttttggtccatgtaatttcaaattcctcaacttttggtccctcagtttacgt 18713188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 13132250 - 13132084
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||| ||||| |||||||| | |||||||||||||| |||| | |||||||||  |||||||||||  |||||||||||||| ||||||||||||||    
T  13132250 ttagattctgtccctgtaatttcatattcttccacttttggtcccttctttcatcaaatcagcagaatctgcataaattacgtccttgtaatttcatatt 13132151  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
     |||||||||||||||| |||||||||||||| || ||||||| | ||||||||||||||| |||||    
T  13132150 tctcccacttttggtccatgtaatttcagattactccacttttagcccctcattttacgtgtcatgt 13132084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 26252337 - 26252455
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||  ||||||||||||||||||||||||| |||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagatt 26252436  T
Q  168 cctcccacttttggtccct 186  Q
    |||||||||||||||||||    
T  26252437 cctcccacttttggtccct 26252455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 35376164 - 35376346
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttcc 100  Q
    ||||||||||| ||||||||||||||||||||| ||||||   ||| || ||||||          || ||||||||||  |||||||||||||||||||    
T  35376164 ggtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaagatttagattttgtctctgtaattttagattcttcc 35376263  T
Q  101 acttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccct 186  Q
    |||||| |||  ||||||||||||||||||||||||| ||||||||| |||| |||||   || ||||||||||||||||||||||    
T  35376264 acttttggtctctcctttcatcacgtcagcagaatccgcataaattaagtccatgtaa---cagattcctcccacttttggtccct 35376346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 48259901 - 48259986
Alignment:
Q  149 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| |||||||||| |||||||| ||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  48259901 gtccatgtaatttcagattcctcctacttttggtccctgttatttcagattcctccacttttgatccctcattttacgtgccatgt 48259986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 41947232 - 41947070
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnnttagattttgtccatgtaattttagattcttcc 100  Q
    ||||||||| |||||||||||||||||||||||| ||||| |  ||| || || | |          ||||||||||||| |||||||| | ||| ||||    
T  41947232 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtccttttaaaaaaaaaattagattttgtccttgtaatttcatatttttcc 41947133  T
Q  101 acttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttca 163  Q
    |||||| |||| | ||||||| | |||| |||||||  |||||||||||||||||||||||||    
T  41947132 acttttggtccctgctttcataaagtcaacagaatctgcataaattacgtccctgtaatttca 41947070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 38573969 - 38574105
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt-nnnnnnnnnnttagattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| |  ||||||           ||||||||||||| |||||||| | |||||||    
T  38573969 gggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 38574068  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| |||| || || || |||||||||||||||    
T  38574069 cacttttggtccctcattccaccacgtcagcagaatc 38574105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 26252418 - 26252472
Alignment:
Q  181 gtccctgtaatttcagattccttc-acttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  26252418 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgccatgt 26252472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41946965 - 41947006
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41946965 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 41947006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 37012712 - 37012844
Alignment:
Q  6 aatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattcttccact 103  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||| || |||            ||||||||||||| |||||||| |||||||||||||    
T  37012712 aatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 37012811  T
Q  104 tttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||| |||| |  || || |||||||||||||||    
T  37012812 tttggtcccttattccaccacgtcagcagaatc 37012844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 9397076 - 9396940
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||| |||||||||||||||||||||||  ||||||  ||| || ||||||          || ||||||||||| |||||||| |||||||||    
T  9397076 gggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttc 9396977  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| | || || || || |||||||||||||||    
T  9396976 cacttttggaccatcattccaacacgtcagcagaatc 9396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31218359 - 31218318
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  31218359 gggtaaatacctcttttcgtccctgtaatattagcgaattcc 31218318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 9619357 - 9619220
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    ||||||||||||||||| |||||||||||||||| ||||||   ||| || ||||||            ||||||||||||| |||||||| | ||||||    
T  9619357 gggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattctt 9619258  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| ||||||| || || ||||| |||||||||    
T  9619257 ccacttttggtccttcattccaccacgtaagcagaatc 9619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 13132010 - 13132078
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| ||| |||||||||| ||||||||||||||||  ||| || ||||| |||||||||||||||    
T  13132010 ttagattatgttcatgtaatttcagattcttccacttttgatccctcatttcaccacgtcagcagaatc 13132078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 15641093 - 15641053
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  15641093 ggtaaatacctcttttcgtccttgtaatattagtgaattcc 15641053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 31944259 - 31944191
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||||||||||||||||| | |||||||||||||| |||| || || || ||||||| |||||||    
T  31944259 ttagattttgtccatgtaatttcatattcttccactttttgtccctcattccaccacgtcaacagaatc 31944191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 46046430 - 46046486
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt 57  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |||| || ||||||    
T  46046430 gggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgt 46046486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 7819322 - 7819255
Alignment:
Q  69 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||||||| |||||| | |||||||||||||||| |||| || || || |||||||||||||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtcagcagaatc 7819255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 15641024 - 15640957
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaat 135  Q
    ||||||| ||||| |||||||| |||||||||||||||| || | || ||||| ||||||||||||||    
T  15641024 ttagattatgtccctgtaatttcagattcttccacttttggttcctcatttcaccacgtcagcagaat 15640957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 3018014 - 3018052
Alignment:
Q  4 taaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattcc 3018052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18667668 - 18667626
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcca 43  Q
    |||| ||||||||||||||||||||||||||||| ||||||||    
T  18667668 gggttaatacctcttttcgtccctgtaatattagcgaattcca 18667626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26252615 - 26252573
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcca 43  Q
    ||||||||| |||||||||||||||||||||||| ||||||||    
T  26252615 gggtaaatatctcttttcgtccctgtaatattagcgaattcca 26252573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 50462774 - 50462728
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaattt 47  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||||    
T  50462774 gggttaatacctcttttggtccctgtaatattagcgaattccaattt 50462728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 31090060 - 31090197
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt---nnnnnnnnnnttagattttgtccatgtaattttagattct 97  Q
    |||||||||| |||||| |||||||||||||||||||||| | |||| || ||||||             ||||||||||||| |||||||| | |||||    
T  31090060 gggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 31090159  T
Q  98 tccacttttagtccttcctttcatcacgtcagcagaat 135  Q
    ||||||||| |||| || || || ||||| ||||||||    
T  31090160 tccacttttggtccctcattccaccacgtaagcagaat 31090197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 48259823 - 48259864
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  48259823 gggtaaatatctcttttcgtccctgtaatattagcgaattcc 48259864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 3273929 - 3273861
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||| ||| |||||||| ||||||||||||||||  ||| || ||||| |||||||| ||||||    
T  3273929 ttagattttatccctgtaatttcagattcttccacttttgatccctcatttcaccacgtcagtagaatc 3273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 9516611 - 9516651
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  9516611 ggtaaatatctcttttcgtccctgtaatattagcgaattcc 9516651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 9516679 - 9516747
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| |||||||||    
T  9516679 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatc 9516747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 48580239 - 48580203
Alignment:
Q  6 aatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattcc 48580203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9516988 - 9516949
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  9516988 gggtaaatatctcttttcgtccctgtaatattagcgaatt 9516949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13132317 - 13132278
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  13132317 gggtaaatacctattttcgtccctgtaatattagcgaatt 13132278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 34063983 - 34064119
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattcttc 99  Q
    ||||||||||||||||||||||||||||||||  |||||| | ||| || ||||||            ||||||||||||  |||||||| |||||||||    
T  34063983 ggtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttc 34064082  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| |||| || || || ||| ||||| |||||    
T  34064083 cacttttggtccctcattccaccacatcagccgaatc 34064119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 35376502 - 35376369
Alignment:
Q  4 taaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt-nnnnnnnnnnttagattttgtccatgtaattttagattcttccac 102  Q
    |||||| ||||||||||||||||||||||||  ||||||| ||| || ||||||           ||| ||||||||| |||||||| ||| ||||||||    
T  35376502 taaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaaaaaagatttaaattttgtccctgtaatttcagaatcttccac 35376403  T
Q  103 ttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||| |||| || || || |||||||||| ||||    
T  35376402 ttttggtccctcattccaccacgtcagcaaaatc 35376369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 15640724 - 15640757
Alignment:
Q  9 acctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||||||||||||||||||| |||||||    
T  15640724 acctcttttcgtccctgtaatattagcgaattcc 15640757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 15641015 - 15640974
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    |||||||||||||||||||| | |||||||||| ||||||||    
T  15641015 gtccctgtaatttcagattcttccacttttggttcctcattt 15640974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 26252346 - 26252383
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctc 218  Q
    |||||||||||||||||||| | |||||||||||||||    
T  26252346 gtccctgtaatttcagattcttccacttttggtccctc 26252383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31943950 - 31943990
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  31943950 gggtaaatac-tcttttcgtccctgtaatattagcgaattcc 31943990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 36888980 - 36888943
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctc 218  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  36888980 gtccctgtaatttcagattcctccacttttagtccctc 36888943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 38574343 - 38574306
Alignment:
Q  4 taaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattc 38574306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 43312287 - 43312324
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctc 218  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  43312287 gtccctgtaatttcagattcctccacttttagtccctc 43312324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 48260126 - 48260089
Alignment:
Q  3 gtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  48260126 gtaaatatctcttttcgtccctgtaatattagcgaatt 48260089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 3273919 - 3273879
Alignment:
Q  182 tccctgtaatttcagattccttcacttttggtccctcattt 222  Q
    ||||||||||||||||||| | |||||||| ||||||||||    
T  3273919 tccctgtaatttcagattcttccacttttgatccctcattt 3273879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 7819314 - 7819274
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||| |||||||| | ||||||||||||||||||    
T  7819314 gtccctgtaatgtcagattcttccacttttggtccctcatt 7819274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 18713269 - 18713201
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||  |||||||| ||||||||||| |||| |||| |  || || |||||||||||||||    
T  18713269 ttagattttgtctctgtaatttcagattcttccagttttggtcccttattccaccacgtcagcagaatc 18713201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 31090139 - 31090179
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  31090139 gtccctgtaatttcatattcttccacttttggtccctcatt 31090179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 34064064 - 34064100
Alignment:
Q  185 ctgtaatttcagattccttcacttttggtccctcatt 221  Q
    |||||||||||||||| | ||||||||||||||||||    
T  34064064 ctgtaatttcagattcttccacttttggtccctcatt 34064100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 35376428 - 35376388
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||||| || | ||||||||||||||||||    
T  35376428 gtccctgtaatttcagaatcttccacttttggtccctcatt 35376388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 36888989 - 36888921
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| ||||| |||||||| |||||| |||||||||||||| || ||| | |  ||||||||||||    
T  36888989 ttagattatgtccctgtaatttcagattcctccacttttagtccctcgtttaaccttgtcagcagaatc 36888921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 37012785 - 37012821
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccct 217  Q
    |||||||||||||||||||| | ||||||||||||||    
T  37012785 gtccctgtaatttcagattcttccacttttggtccct 37012821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 38574046 - 38574086
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  38574046 gtccctgtaatttcatattcttccacttttggtccctcatt 38574086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 48260060 - 48259992
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | ||||||||||||||  ||  || || ||||||||||||| ||||    
T  48260060 ttagattttgtccctgtaatttcaaattcttccacttttgatcgctcattccatcacgtcagcataatc 48259992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 4562 - 4798
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn---ttagattttgtccatgtaattttagattct 97  Q
    |||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||             ||| ||||||||| |||||||| |||||||    
T  4562 gggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagattct 4661  T
Q  98 tccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcaga 197  Q
    || |||||| |||| |||||| |||| |||| |||||||  |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  4662 tctacttttggtccctccttttatcaagtcaacagaatctgcataaattacgtccgtgtaatttcagattcctcccacttttggtccctgtaatttcaga 4761  T
Q  198 ttccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  4762 ttcctccacttttggtccctcattttacgtaccatgt 4798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 4940 - 4804
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt-nnnnnnnnnnttagattttgtccatgtaattttagattcttc 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||  ||| |  ||||||           ||||||||||||| |||||||| | |||||||    
T  4940 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgtaaaaataagatttagattttgtccttgtaatttcatattcttc 4841  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| |||| || || || ||||| |||||||||    
T  4840 cacttttggtccctcattccaccacgtaagcagaatc 4804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 30617967 - 30618196
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnnttagattttgtccatgtaattttagattcttcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| || ||   |          ||||||||||||| |||||||| | ||| ||||    
T  30617967 gggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtcc---tttaaaaaaatttagattttgtccctgtaatttcatattgttcc 30618063  T
Q  101 acttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattc 200  Q
    |||||| |||| |||||| |||||||||||||||||  ||||||||||||||||||||||||| ||| |||||||||||| || ||||||||||| ||||    
T  30618064 acttttggtccctccttttatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt-ctcccacttttgatcactgtaatttcaaattc 30618162  T
Q  201 cttcacttttggtccctcattttacgtgccatgt 234  Q
    || |||||||||||||||||||||||||||||||    
T  30618163 ctccacttttggtccctcattttacgtgccatgt 30618196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 24731935 - 24732173
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn-----ttagattttgtccatgtaattttagatt 95  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||               ||||||||||||| |||||||| |||||    
T  24731935 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaaaaattagattttgtccctgtaatttcagatt 24732034  T
Q  96 cttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttca 195  Q
    |||| |||||| |||| ||||||||||| |||| || ||||  |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  24732035 cttctacttttggtccctcctttcatcaagtcaacataatctacataaattacgtccttgtaatttcagattcctcccacttttggtccctataatttca 24732134  T
Q  196 gattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  24732135 gattcctccacttttggtccctcattttacgtaccatgt 24732173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 9481182 - 9481417
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||| || ||||||            ||||||| ||||| |||||||| | ||||||    
T  9481182 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 9481281  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagat 198  Q
    ||| |||| |||| ||||||||||||||||||||||||  |||||||||||| |||||||||||| |||||||| | |||||||||||||||||||| ||    
T  9481282 ccaattttggtccctcctttcatcacgtcagcagaatctgcataaattacgttcctgtaatttcagattcctcctagttttggtccctgtaatttcaaat 9481381  T
Q  199 tccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||| || |||| |||||||||||| ||||||||||    
T  9481382 tcctccattttttgtccctcattttgcgtgccatgt 9481417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 69 - 234
Target Start/End: Complemental strand, 2299617 - 2299453
Alignment:
Q  69 tagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattc 168  Q
    |||||||||||| |||||||| ||||||||||||||||  ||| ||||||||||| |||| |||||||  ||||||||||||||||||| ||||| ||||    
T  2299617 tagattttgtccctgtaatttcagattcttccactttttatccctcctttcatcaagtcaacagaatctgcataaattacgtccctgta-tttcagattc 2299519  T
Q  169 ctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||    
T  2299518 ctcccacttttggtccttgtaattttagattccgccacttttggtccctcattttacgtgccatgt 2299453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 224
Target Start/End: Complemental strand, 3230171 - 3230016
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||||||| |||||| | |||||| ||||||| ||| | | ||||||||||||| |||||||  ||||||| |||||||||||||||||||||    
T  3230171 ttagattttgtccatataatttcatattctttcacttttggtcat-cttttcatcacgtcaacagaatctgcataaatcacgtccctgtaatttcatatt 3230073  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcatttta 224  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  3230072 cctcccacttttggtccttgtaatttcatattcctccacttttggtccctcatttta 3230016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 234
Target Start/End: Complemental strand, 26385649 - 26385421
Alignment:
Q  4 taaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn--ttagattttgtccatgtaattttagattcttcca 101  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| || ||||||            |||||| |||| | || ||||| | |||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaacaaagatttagatgttgttcctgcaatttcatattcttcca 26385550  T
Q  102 cttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattcc 201  Q
    ||||| |||  ||||||||||| ||||    |||   ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26385549 cttttggtctctcctttcatcaagtcat---aatatgcataaat-acgtccctgtaatttcatattcctcccagttttggtccctgtaatttcagattcc 26385454  T
Q  202 ttcacttttggtccctcattttacgtgccatgt 234  Q
    | |||||||||||||||||||||||||||||||    
T  26385453 tccacttttggtccctcattttacgtgccatgt 26385421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 82 - 234
Target Start/End: Complemental strand, 30459196 - 30459044
Alignment:
Q  82 tgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttgg 181  Q
    |||||||| |||||||| ||||||| |||  |||||||||||||| |||| |||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  30459196 tgtaatttcagattctttcacttttggtctctcctttcatcacgttagcataatctccataaattacgtccctataatttcaaattcctcccacttttgg 30459097  T
Q  182 tccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||| ||||||||||||||  |||||||||| || ||||||||||||| |||||    
T  30459096 tccttgtaatttcagattatttcacttttgatctctcattttacgtgtcatgt 30459044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 76 - 234
Target Start/End: Complemental strand, 10322032 - 10321873
Alignment:
Q  76 tgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccac 175  Q
    ||||| |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||||    
T  10322032 tgtccctgtaatttcagattctttcacttttggtccttcctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagattcctcccac 10321933  T
Q  176 ttttggtccctgtaatttcagattccttc-acttttggtccctcattttacgtgccatgt 234  Q
    ||||||| | |||||||||||||| || | | |||| | |||| ||||||||||||||||    
T  10321932 ttttggttcatgtaatttcagattactccaatttttagccccttattttacgtgccatgt 10321873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 33637628 - 33637746
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||||||||| | ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||  |||| |||||||||||||||||||| |||    
T  33637628 ttagattttgttcttgtaattttagattcttccacttttggtccctcctttcattacgtcagcagaatctgcatagattacgtccctgtaatttcagatt 33637727  T
Q  168 cctcccacttttggtccct 186  Q
    |||||||||||||||||||    
T  33637728 cctcccacttttggtccct 33637746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 32017881 - 32017696
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    ||||||||| |||||||||||||||||||||||| |||||||  ||| || ||||||          || ||||||||||| |||||||| | |||||||    
T  32017881 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 32017782  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccct 186  Q
    ||||||| |||| |||||||||||||||||| ||||   |||||||||| |||||||||||||| |||||| |||||||||||||||    
T  32017781 cacttttggtccctcctttcatcacgtcagcggaatatgcataaattacatccctgtaatttcaaattcct-ccacttttggtccct 32017696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 33714734 - 33714630
Alignment:
Q  130 cagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgc 229  Q
    |||||||  |||||||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |    
T  33714734 cagaatctgcataaattacgtccttgtaatttcagattcctctcacttttggtctctgtaatttcagattcctccacttttggtccctcattttacgtac 33714635  T
Q  230 catgt 234  Q
    |||||    
T  33714634 catgt 33714630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 217
Target Start/End: Complemental strand, 18500641 - 18500506
Alignment:
Q  83 gtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggt 182  Q
    |||||||||||||||||||||||| |||| ||||||||||| | || |||||||  ||||||||| ||||||||||||||| || | | |||||||||||    
T  18500641 gtaattttagattcttccacttttggtccctcctttcatcaaggcaacagaatctgcataaattatgtccctgtaatttcagatcctttccacttttggt 18500542  T
Q  183 ccctgtaa-tttcagattccttcacttttggtccct 217  Q
    |||||||| ||| |||||||| ||||||||||||||    
T  18500541 ccctgtaatttttagattcctccacttttggtccct 18500506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 17142875 - 17142798
Alignment:
Q  140 ataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcagattccttcacttttggtccct 217  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  17142875 ataaattaggtccctgtaatttcagattcctctcacttttggtccctgtaatttcagattcctccacttttggtccct 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 14681191 - 14681025
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatatt 167  Q
    ||||| ||||||| || |||||||||||| ||||||||| |||| |  ||| |  ||||||| ||||||  || | |||||||||||||||||||| |||    
T  14681191 ttagactttgtccttgcaattttagattcctccacttttggtcccttatttaactacgtcagtagaatctgcacatattacgtccctgtaatttcagatt 14681092  T
Q  168 cctcccacttttggtccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
     ||| |||||||||||| | |||||||||||| || ||||||||||| ||| ||| ||||| |||||    
T  14681091 actctcacttttggtccatataatttcagatttctccacttttggtctctcttttcacgtgtcatgt 14681025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 24732315 - 24732179
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt--nnnnnnnnnnttagattttgtccatgtaattttagattctt 98  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| || ||||||            |||||||||||||||||||||| | ||||||    
T  24732315 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattt-agtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattctt 24732217  T
Q  99 ccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| |||| || || || ||||| |||||||||    
T  24732216 ccacttttggtccctcattccaccacgtaagcagaatc 24732179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 18500520 - 18500457
Alignment:
Q  172 ccacttttggtccctgtaatttc-agattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||| |||||    
T  18500520 ccacttttggtccctgtaatttttagattcctccacttttggtccctcattttacgtgtcatgt 18500457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 14680951 - 14681019
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||  |||||||| | |||||||||||||| ||||||| ||||| |||||||||||||||    
T  14680951 ttagattttgtctttgtaatttcatattcttccacttttggtccttcatttcaccacgtcagcagaatc 14681019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 19284198 - 19284258
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtca 128  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||| ||||    
T  19284198 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcatgtca 19284258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 32017731 - 32017679
Alignment:
Q  182 tccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  32017731 tccctgtaatttcaaattcctccacttttggtccctcattttacgtgtcatgt 32017679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 9854196 - 9854128
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || ||||| |||||||||| ||||    
T  9854196 ttagattttgtccttgtaatttcatattcttccacttttggtccctcatttcaccacgtcagcaaaatc 9854128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 26385347 - 26385415
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||||| |||||||||||||| |||| || || || ||||| |||||||||    
T  26385347 ttagattttgtccctgtaattttatattcttccacttttggtccctcattccaccacgtaagcagaatc 26385415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 30618270 - 30618202
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| ||||||||||||||||||||||||| |||  |  || || |||||||||||||||    
T  30618270 ttagattttgtccctgtaattttagattcttccactttttgtctcttattccaccacgtcagcagaatc 30618202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 33637709 - 33637757
Alignment:
Q  181 gtccctgtaatttcagattccttc-acttttggtccctcattttacgtg 228  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  33637709 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtg 33637757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 18500707 - 18500668
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  18500707 gggtaaatacctcttttcgtccctgtaatattagcgaatt 18500668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 18500315 - 18500451
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnntt-agattttgtccatgtaattttagattcttc 99  Q
    |||||||||||||||||||||||| ||||||||| ||||| |  ||| || ||||||          || ||||||||||| |||||||| | |||||||    
T  18500315 gggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgtaagaaaaagatttagattttgtccctgtaatttcatattcttc 18500414  T
Q  100 cacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| |||| || || || ||||| |||||||||    
T  18500415 cacttttggtccctcattccaccacgtaagcagaatc 18500451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26385278 - 26385318
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  26385278 gggtaaatacctcttttcgtctctgtaatattagcgaattc 26385318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 30458903 - 30458939
Alignment:
Q  4 taaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    ||||||| |||||||||||||||||||||||||||||    
T  30458903 taaatacatcttttcgtccctgtaatattagtgaatt 30458939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 30458970 - 30459038
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||| ||||  |||||||| ||||||||| ||||||||||  || ||||| |||||||||||||||    
T  30458970 ttagattatgtcactgtaatttcagattcttcaacttttagtctctcatttcaccacgtcagcagaatc 30459038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 33714556 - 33714624
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| || || || ||||| |||||||||    
T  33714556 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatc 33714624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 9481491 - 9481448
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtcc 111  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||    
T  9481491 ttagattttgtccttgtaatttcagattcttccacttttggtcc 9481448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 32017619 - 32017673
Alignment:
Q  82 tgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| |||||||||||||||| ||||||  || || |||||||||||||||    
T  32017619 tgtaatttcagattcttccacttttggtcctttattccaccacgtcagcagaatc 32017673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 34884558 - 34884596
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  34884558 ggtaaatatctcttttcgtccttgtaatattagtgaatt 34884596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2299691 - 2299650
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||| |||||||||| ||||||||||||| |||||||    
T  2299691 gggtaaatatctcttttcgttcctgtaatattagcgaattcc 2299650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 10321737 - 10321774
Alignment:
Q  5 aaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattcc 10321774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 19284130 - 19284171
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatattagtgaattcca 43  Q
    ||||||||||||||||||| | ||||||||||| ||||||||    
T  19284130 ggtaaatacctcttttcgttcatgtaatattagcgaattcca 19284171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 19284207 - 19284244
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctc 218  Q
    |||||||||||||||||||| | |||||||||||||||    
T  19284207 gtccctgtaatttcagattcttccacttttggtccctc 19284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 18500392 - 18500432
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| | ||||||||||||||||||    
T  18500392 gtccctgtaatttcatattcttccacttttggtccctcatt 18500432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 33637828 - 33637788
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  33637828 gtccctgtaatttcatattctttcacttttgatccctcatt 33637788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 82 - 235
Target Start/End: Complemental strand, 4164 - 4011
Alignment:
Q  82 tgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttgg 181  Q
    |||||||| |||||||| || |||| |||| ||||||||||||||||||||||||  ||||||||| ||| ||||||||||| |||||||||||||||||    
T  4164 tgtaatttcagattctttcatttttggtccctcctttcatcacgtcagcagaatctgcataaattatgtctctgtaatttcagattcctcccacttttgg 4065  T
Q  182 tccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgtg 235  Q
    || ||||||||||| |||||| |||||||||||||||||||||| |||||||||    
T  4064 tcactgtaatttcatattcctccacttttggtccctcattttacttgccatgtg 4011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3869 - 3910
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  3869 gggtaaatatctcttttcgtccctgtaatattagcgaattcc 3910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 80; Significance: 1e-37; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 234
Target Start/End: Original strand, 8415 - 8557
Alignment:
Q  91 agattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaa 190  Q
    |||||||| ||||||| |||  |||||||||||||||| || ||||  ||| ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  8415 agattctttcacttttggtctctcctttcatcacgtcaacaaaatctgcatcaattacgtccctgtaatttcagattcctcccacttttggtccttgtaa 8514  T
Q  191 tttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    |||||||||||| || ||||||| |||||||||||||| |||||    
T  8515 tttcagattcctccatttttggt-cctcattttacgtgtcatgt 8557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 8631 - 8563
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| || || || |||||||||||||||    
T  8631 ttagattttgtccctgtaattttagattcttccacttttggtccctcattccaccacgtcagcagaatc 8563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8325 - 8364
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaatt 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  8325 gggtaaatacctcttttcgtccctgtaatattagcgaatt 8364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 8622 - 8582
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||| |||||| | ||||||||||||||||||    
T  8622 gtccctgtaattttagattcttccacttttggtccctcatt 8582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 513 - 363
Alignment:
Q  83 gtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggt 182  Q
    ||||||| ||||| |||||||||| ||   |||||| ||||| |||||||||||  |||||||||||||  |||||||||| |||||||||  |||||||    
T  513 gtaatttcagattattccacttttggtatctcctttaatcacatcagcagaatctgcataaattacgtct-tgtaatttcagattcctcccgattttggt 415  T
Q  183 ccctgtaatttcagattccttcacttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  414 ccctgtaatttcagattcctctacttttggtccctcattttacgtaccatgt 363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 15939 - 15808
Alignment:
Q  70 agattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcc 169  Q
    ||||||||||| |||||||| | |||||| ||||||| |||  ||||||||||||||||||||||||  |||||||||   | ||||||||||| |||||    
T  15939 agattttgtccctgtaatttcatattctttcacttttggtctctcctttcatcacgtcagcagaatctgcataaatta-tacgctgtaatttcagattcc 15841  T
Q  170 tcccacttttggtccctgtaatttcagattcct 202  Q
    |||||||||||||| ||||||||||| ||||||    
T  15840 tcccacttttggtctctgtaatttcaaattcct 15808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16006 - 15965
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||| |||||||||||| ||||||||||| |||||||    
T  16006 gggtaaatatctcttttcgtccatgtaatattagcgaattcc 15965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 7578 - 7390
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgtnnnnnnnnnn---ttagattttgtccatgtaattttagattct 97  Q
    |||||||||||| ||||||||||||||||||||| |||||||  ||| || ||||||             ||||||||||||| |||||||| |||||||    
T  7578 gggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 7479  T
Q  98 tccacttttagtccttcctttcatcacgtcagcagaatccccataaattacgtccctgtaatttcatattcctcccacttttggtccct 186  Q
    || |||||| |||  ||||||||||| |||| || ||||  |||||||||| ||| |||||||||| |||||| |||||||||||||||    
T  7478 tctacttttggtctatcctttcatcaagtcaacaaaatctgcataaattacatccttgtaatttcagattcctaccacttttggtccct 7390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 7422 - 7373
Alignment:
Q  186 tgtaatttcagattccttc-acttttggtccctcattttacgtgccatgt 234  Q
    ||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  7422 tgtaatttcagattcctaccacttttggtccctcattttacgtaccatgt 7373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 7227 - 7266
Alignment:
Q  2 ggtaaatacctcttttcgtccctgtaatattagtgaattc 41  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  7227 ggtaaatacctcttttcgtccttgtaatattagcgaattc 7266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 12291 - 12223
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||||||||||    
T  12291 ttagattttgtccctgtaatttcagattcttccacttttggtccatcctttcatcacgtcagcagaatc 12223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 12355 - 12319
Alignment:
Q  6 aatacctcttttcgtccctgtaatattagtgaattcc 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattcc 12319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 37; Significance: 0.000000000006; HSPs: 4)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 5057 - 4989
Alignment:
Q  68 ttagattttgtccatgtaattttagattcttccacttttagtccttcctttcatcacgtcagcagaatc 136  Q
    |||||||| |||| ||||||||||||||||||||||||| |||| || || || ||||| |||||||||    
T  5057 ttagatttagtccctgtaattttagattcttccacttttggtccctcattccaccacgtaagcagaatc 4989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 4924 - 4983
Alignment:
Q  176 ttttggtccctgtaatttcagattccttc-acttttggtccctcattttacgtgccatgt 234  Q
    |||| |||| |||||||||| ||| || | ||||||||||||||||||||||||||||||    
T  4924 ttttagtccatgtaatttcatatttctcccacttttggtccctcattttacgtgccatgt 4983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 4929 - 4966
Alignment:
Q  149 gtccctgtaatttcatattcctcccacttttggtccct 186  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  4929 gtccatgtaatttcatatttctcccacttttggtccct 4966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 5048 - 5008
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctcatt 221  Q
    ||||||||||||| |||||| | ||||||||||||||||||    
T  5048 gtccctgtaattttagattcttccacttttggtccctcatt 5008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 4745 - 4781
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccct 217  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4745 gtccctgtaatttcagattcctccacttttggtccct 4781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6057 - 6001
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattccaatttcagcccctgt 57  Q
    ||||||||||||||||| ||||||| |||||||| ||||||| |||| || ||||||    
T  6057 gggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgt 6001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4667 - 4709
Alignment:
Q  1 gggtaaatacctcttttcgtccctgtaatattagtgaattcca 43  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||    
T  4667 gggtaaatacctcttttagtccctgcaatattagcgaattcca 4709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 5978 - 5941
Alignment:
Q  181 gtccctgtaatttcagattccttcacttttggtccctc 218  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  5978 gtccctgtaatttcagattcctccacttttgatccctc 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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