View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0438_2D_low_68 (Length: 215)
Name: NF0438_2D_low_68
Description: NF0438_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0438_2D_low_68 |
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Alignment Details
Target: chr6 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 34563139 - 34563211
Alignment:
| Q |
135 |
taattaagatatatactcgcacgctcacac--acatttaaaatagcacatcaaattcataatttgcatgaaca |
205 |
Q |
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| T |
34563139 |
taattaagatatatactcgcacgctcacactcacatttaaaatagcacatcaaattcataatttacatgaaca |
34563211 |
T |
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