View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0440-3-1-Insertion-14 (Length: 113)
Name: NF0440-3-1-Insertion-14
Description: 454-NF0440-3-1
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0440-3-1-Insertion-14 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 74; Significance: 2e-34; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 49201453 - 49201376
Alignment:
| Q |
36 |
agttcttacttctatttcacataccatgttttgaaataggaaaaatcttcagcaaaggctctttgcggttaatattgt |
113 |
Q |
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| T |
49201453 |
agttcttacttctatttcacataccatgttttgaaataggaaaaaccttcagcaaaggctctttgcggttaatattgt |
49201376 |
T |
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