View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0440-3-1-Insertion-46 (Length: 69)
Name: NF0440-3-1-Insertion-46
Description: 454-NF0440-3-1
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0440-3-1-Insertion-46 |
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Alignment Details
Target: chr2 (Bit Score: 55; Significance: 2e-23; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-23
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 3383932 - 3383870
Alignment:
| Q |
3 |
gtggaagttggttttaggatggtgtgggttgtagagtcggtaatagtgaaagtatttcatttt |
65 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |
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| T |
3383932 |
gtggaagttggttttaggatggtgtgggttgtagagtcggtaatggtgaaagtatttcctttt |
3383870 |
T |
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