View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0440-8F-Insertion-14 (Length: 199)
Name: NF0440-8F-Insertion-14
Description: NF440-8F
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0440-8F-Insertion-14 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 2711878 - 2711687
Alignment:
| Q |
8 |
attttctcgtggttagtctcaaaacttctatcatactcaatttgtattggttagttaatttttaatgacaaagtgtaaatttagcttttccaaatctgtg |
107 |
Q |
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| T |
2711878 |
attttctcgtggttagtccaaaaacttctatcatactcaatttgtattggttagttaattttgaatgacaaagtgtaaatttagcttttccaaatctgtg |
2711779 |
T |
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| Q |
108 |
caataaataattctatttcattttaatttgaatttttcccataaaaatctttgatctatcatcgtacacgcagatgttttgcttcattttaa |
199 |
Q |
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| T |
2711778 |
caataaataattctatttcattttaatttgaatttttcccataaaaatctttgatctatcatcatacacgcagatgttttgcttcattttaa |
2711687 |
T |
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