View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0440-8F-Insertion-19 (Length: 228)

Name: NF0440-8F-Insertion-19
Description: NF440-8F
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0440-8F-Insertion-19
NF0440-8F-Insertion-19
[»] scaffold0071 (1 HSPs)
scaffold0071 (8-228)||(3145-3365)
[»] chr3 (70 HSPs)
chr3 (8-228)||(15458826-15459046)
chr3 (8-228)||(17498201-17498421)
chr3 (12-228)||(11861866-11862082)
chr3 (8-228)||(14577821-14578041)
chr3 (27-228)||(14872986-14873186)
chr3 (12-228)||(12890220-12890436)
chr3 (12-228)||(15585795-15586011)
chr3 (12-228)||(15712459-15712675)
chr3 (12-228)||(6597566-6597782)
chr3 (12-228)||(20058457-20058673)
chr3 (48-224)||(23078414-23078590)
chr3 (33-228)||(15263156-15263351)
chr3 (33-228)||(15263968-15264163)
chr3 (12-217)||(23414201-23414406)
chr3 (12-228)||(3689454-3689670)
chr3 (12-228)||(5421333-5421549)
chr3 (12-228)||(6604246-6604462)
chr3 (12-228)||(13249555-13249771)
chr3 (12-228)||(13256201-13256417)
chr3 (12-228)||(16639284-16639500)
chr3 (12-228)||(16753104-16753320)
chr3 (12-228)||(43166186-43166402)
chr3 (26-228)||(15398922-15399124)
chr3 (12-228)||(15066582-15066792)
chr3 (32-228)||(26789816-26790012)
chr3 (12-228)||(53381422-53381638)
chr3 (27-228)||(5107942-5108143)
chr3 (12-228)||(15359563-15359777)
chr3 (12-228)||(10909721-10909937)
chr3 (12-228)||(48428958-48429174)
chr3 (27-228)||(5109812-5110013)
chr3 (32-228)||(15231147-15231343)
chr3 (32-228)||(15237015-15237211)
chr3 (12-228)||(15344648-15344864)
chr3 (12-222)||(16695678-16695888)
chr3 (36-228)||(12507954-12508146)
chr3 (26-228)||(35983719-35983918)
chr3 (33-108)||(19728294-19728369)
chr3 (12-228)||(10009111-10009327)
chr3 (33-112)||(12842627-12842706)
chr3 (83-228)||(12502482-12502621)
chr3 (142-228)||(24186794-24186880)
chr3 (159-228)||(12273410-12273479)
chr3 (164-228)||(16490726-16490790)
chr3 (15-220)||(12856913-12857115)
chr3 (162-228)||(2036304-2036370)
chr3 (162-228)||(2040045-2040111)
chr3 (162-228)||(14040417-14040483)
chr3 (41-177)||(13027811-13027947)
chr3 (172-228)||(15011365-15011421)
chr3 (36-127)||(10409516-10409607)
chr3 (159-217)||(10416454-10416512)
chr3 (26-128)||(14290021-14290123)
chr3 (9-127)||(28757840-28757958)
chr3 (9-127)||(47127465-47127583)
chr3 (171-228)||(8743788-8743845)
chr3 (171-228)||(13945698-13945755)
chr3 (159-228)||(15937779-15937848)
chr3 (171-228)||(41179846-41179903)
chr3 (72-214)||(31691591-31691730)
chr3 (165-228)||(15935929-15935992)
chr3 (159-214)||(16803370-16803425)
chr3 (171-214)||(31942583-31942626)
chr3 (8-118)||(17495170-17495280)
chr3 (153-214)||(13304193-13304254)
chr3 (171-228)||(16383770-16383827)
chr3 (159-220)||(16824679-16824740)
chr3 (26-127)||(16824769-16824870)
chr3 (183-228)||(19728433-19728478)
chr3 (48-128)||(24190863-24190943)
[»] scaffold0122 (1 HSPs)
scaffold0122 (8-228)||(39761-39981)
[»] chr8 (44 HSPs)
chr8 (8-228)||(18880261-18880481)
chr8 (8-228)||(6518327-6518547)
chr8 (11-228)||(21672475-21672692)
chr8 (33-228)||(22420497-22420692)
chr8 (12-228)||(19981928-19982144)
chr8 (26-220)||(21390504-21390698)
chr8 (26-220)||(21779830-21780024)
chr8 (26-228)||(17354508-17354704)
chr8 (12-228)||(30309748-30309964)
chr8 (26-222)||(21163140-21163336)
chr8 (33-228)||(22524395-22524590)
chr8 (32-228)||(17829574-17829770)
chr8 (12-228)||(32604106-32604322)
chr8 (12-228)||(19116358-19116574)
chr8 (12-228)||(19480680-19480896)
chr8 (12-228)||(19497273-19497489)
chr8 (12-228)||(20014870-20015086)
chr8 (33-228)||(20392068-20392263)
chr8 (12-228)||(15537344-15537560)
chr8 (12-228)||(22043779-22043995)
chr8 (32-228)||(22125566-22125762)
chr8 (32-228)||(17670629-17670825)
chr8 (12-228)||(18860535-18860751)
chr8 (12-228)||(22116782-22116998)
chr8 (33-228)||(22994660-22994860)
chr8 (42-108)||(20384242-20384308)
chr8 (11-108)||(21968838-21968935)
chr8 (33-228)||(19986110-19986302)
chr8 (11-108)||(21330529-21330626)
chr8 (11-108)||(21981678-21981775)
chr8 (11-108)||(21986597-21986694)
chr8 (11-108)||(22003805-22003902)
chr8 (32-228)||(22114015-22114205)
chr8 (15-118)||(22242163-22242266)
chr8 (164-228)||(6606076-6606140)
chr8 (26-228)||(21929403-21929602)
chr8 (162-228)||(21981561-21981627)
chr8 (162-228)||(21986480-21986546)
chr8 (171-228)||(22003688-22003745)
chr8 (171-228)||(22026887-22026944)
chr8 (171-214)||(22176895-22176938)
chr8 (159-228)||(22049444-22049513)
chr8 (11-124)||(22374745-22374858)
chr8 (72-128)||(22026983-22027039)
[»] chr4 (36 HSPs)
chr4 (10-224)||(16241015-16241229)
chr4 (33-228)||(14938-15133)
chr4 (12-228)||(15143850-15144066)
chr4 (30-228)||(14163383-14163581)
chr4 (12-228)||(16247577-16247793)
chr4 (33-228)||(16220104-16220299)
chr4 (12-228)||(18223375-18223591)
chr4 (12-228)||(8390304-8390520)
chr4 (12-228)||(14299883-14300099)
chr4 (12-228)||(12480492-12480708)
chr4 (26-228)||(14700368-14700564)
chr4 (26-228)||(13514259-13514461)
chr4 (36-228)||(13880028-13880220)
chr4 (12-228)||(17091053-17091269)
chr4 (33-228)||(8709592-8709781)
chr4 (32-226)||(8049529-8049723)
chr4 (12-228)||(23959639-23959855)
chr4 (90-228)||(16349703-16349841)
chr4 (12-228)||(18603726-18603936)
chr4 (12-228)||(16232896-16233112)
chr4 (168-228)||(17332225-17332285)
chr4 (133-228)||(14684178-14684273)
chr4 (12-178)||(40476932-40477098)
chr4 (171-228)||(27904435-27904492)
chr4 (26-228)||(14992547-14992746)
chr4 (9-127)||(3261056-3261174)
chr4 (171-228)||(51602962-51603019)
chr4 (171-228)||(53749640-53749697)
chr4 (36-127)||(29449799-29449890)
chr4 (9-127)||(44658128-44658246)
chr4 (159-214)||(16151675-16151730)
chr4 (159-214)||(16155821-16155876)
chr4 (11-128)||(15074253-15074370)
chr4 (153-226)||(16230044-16230117)
chr4 (160-228)||(18260476-18260544)
chr4 (160-228)||(18270439-18270507)
[»] chr6 (38 HSPs)
chr6 (8-228)||(18404242-18404462)
chr6 (12-224)||(23082182-23082394)
chr6 (32-228)||(5835537-5835733)
chr6 (12-228)||(21765571-21765787)
chr6 (33-228)||(19667226-19667409)
chr6 (70-228)||(19872005-19872163)
chr6 (12-228)||(16575646-16575862)
chr6 (12-228)||(16619518-16619734)
chr6 (12-228)||(28259506-28259722)
chr6 (12-228)||(28286194-28286410)
chr6 (12-228)||(28313386-28313602)
chr6 (12-228)||(28338255-28338471)
chr6 (12-228)||(29588748-29588964)
chr6 (12-228)||(2871111-2871327)
chr6 (12-228)||(24292090-24292306)
chr6 (12-228)||(27206378-27206594)
chr6 (12-228)||(27242634-27242850)
chr6 (12-189)||(25755955-25756132)
chr6 (39-225)||(22437655-22437835)
chr6 (41-228)||(25958059-25958246)
chr6 (26-228)||(23084131-23084333)
chr6 (26-228)||(25116330-25116532)
chr6 (41-224)||(18660695-18660878)
chr6 (165-228)||(25607538-25607601)
chr6 (42-228)||(30675279-30675459)
chr6 (42-228)||(18326646-18326832)
chr6 (26-228)||(25771617-25771819)
chr6 (142-228)||(18178751-18178837)
chr6 (26-228)||(21475306-21475514)
chr6 (12-103)||(27558247-27558338)
chr6 (142-228)||(27554601-27554687)
chr6 (26-82)||(18181839-18181895)
chr6 (162-228)||(8720014-8720080)
chr6 (158-217)||(15463232-15463291)
chr6 (162-228)||(16828615-16828679)
chr6 (156-214)||(19438902-19438960)
chr6 (159-217)||(20009827-20009885)
chr6 (14-58)||(19868379-19868423)
[»] scaffold0120 (2 HSPs)
scaffold0120 (8-228)||(12183-12403)
scaffold0120 (9-228)||(15005-15224)
[»] chr5 (45 HSPs)
chr5 (8-228)||(25430243-25430463)
chr5 (33-224)||(26733841-26734032)
chr5 (12-228)||(21331332-21331548)
chr5 (12-228)||(23536558-23536774)
chr5 (12-225)||(21883604-21883817)
chr5 (12-228)||(18782941-18783157)
chr5 (33-228)||(23475042-23475237)
chr5 (26-228)||(20804438-20804640)
chr5 (12-228)||(22351743-22351959)
chr5 (12-228)||(16360326-16360542)
chr5 (12-228)||(19773784-19774000)
chr5 (12-228)||(22329233-22329449)
chr5 (12-228)||(27522230-27522446)
chr5 (24-228)||(27664849-27665053)
chr5 (12-228)||(34570318-34570534)
chr5 (12-228)||(22138492-22138708)
chr5 (12-228)||(27614180-27614396)
chr5 (12-228)||(27681746-27681962)
chr5 (33-228)||(21560371-21560566)
chr5 (27-228)||(29472419-29472620)
chr5 (12-228)||(41774667-41774883)
chr5 (45-228)||(23670474-23670657)
chr5 (12-228)||(37287842-37288058)
chr5 (12-228)||(40712604-40712820)
chr5 (26-228)||(23461745-23461941)
chr5 (45-228)||(43123309-43123492)
chr5 (12-178)||(14996135-14996301)
chr5 (153-220)||(23562523-23562590)
chr5 (162-228)||(22591101-22591167)
chr5 (162-228)||(22594656-22594722)
chr5 (158-217)||(20825402-20825461)
chr5 (153-228)||(30614915-30614990)
chr5 (162-228)||(16257382-16257448)
chr5 (159-217)||(28891305-28891363)
chr5 (159-217)||(28911209-28911267)
chr5 (159-217)||(28926477-28926535)
chr5 (171-228)||(17265687-17265744)
chr5 (168-228)||(21619904-21619964)
chr5 (181-228)||(41768262-41768309)
chr5 (9-127)||(14883435-14883553)
chr5 (159-217)||(22465897-22465955)
chr5 (160-217)||(20771086-20771143)
chr5 (33-178)||(21981885-21982030)
chr5 (27-120)||(30609154-30609247)
chr5 (8-108)||(25851877-25851977)
[»] scaffold0023 (3 HSPs)
scaffold0023 (8-228)||(41175-41395)
scaffold0023 (15-118)||(29848-29951)
scaffold0023 (170-226)||(29792-29848)
[»] chr2 (39 HSPs)
chr2 (8-228)||(23065897-23066117)
chr2 (8-228)||(23075347-23075567)
chr2 (15-228)||(22741667-22741880)
chr2 (9-228)||(22732475-22732694)
chr2 (12-228)||(23028163-23028379)
chr2 (26-228)||(23030301-23030503)
chr2 (12-228)||(22462182-22462398)
chr2 (26-222)||(24679027-24679223)
chr2 (26-228)||(20321520-20321729)
chr2 (12-202)||(21319730-21319920)
chr2 (40-228)||(23104433-23104616)
chr2 (26-228)||(24816540-24816742)
chr2 (12-228)||(9487739-9487955)
chr2 (12-228)||(17002523-17002739)
chr2 (12-228)||(24656359-24656575)
chr2 (12-228)||(9339105-9339321)
chr2 (32-228)||(10872393-10872589)
chr2 (12-228)||(16932030-16932246)
chr2 (32-228)||(21902083-21902279)
chr2 (32-228)||(23115760-23115956)
chr2 (12-228)||(27374792-27375008)
chr2 (12-228)||(16984763-16984979)
chr2 (74-202)||(23039347-23039475)
chr2 (12-228)||(24873455-24873670)
chr2 (12-228)||(22322046-22322262)
chr2 (13-129)||(24704282-24704398)
chr2 (12-228)||(24713557-24713773)
chr2 (12-228)||(24265893-24266109)
chr2 (12-228)||(41605787-41606003)
chr2 (26-228)||(44382272-44382474)
chr2 (168-228)||(23003763-23003823)
chr2 (162-228)||(28351548-28351614)
chr2 (171-228)||(12578029-12578086)
chr2 (171-214)||(23275275-23275318)
chr2 (153-228)||(45535175-45535250)
chr2 (9-127)||(20849109-20849227)
chr2 (171-228)||(12571547-12571604)
chr2 (145-178)||(24704245-24704278)
chr2 (11-88)||(28351400-28351477)
[»] scaffold0324 (1 HSPs)
scaffold0324 (11-228)||(2635-2852)
[»] scaffold0358 (1 HSPs)
scaffold0358 (8-228)||(9867-10087)
[»] scaffold0490 (3 HSPs)
scaffold0490 (9-228)||(812-1031)
scaffold0490 (154-228)||(3899-3973)
scaffold0490 (26-118)||(3803-3895)
[»] scaffold0084 (1 HSPs)
scaffold0084 (8-228)||(9143-9363)
[»] scaffold0207 (1 HSPs)
scaffold0207 (33-226)||(3713-3906)
[»] scaffold0278 (1 HSPs)
scaffold0278 (8-228)||(4471-4691)
[»] scaffold0718 (1 HSPs)
scaffold0718 (26-228)||(6166-6368)
[»] scaffold0621 (2 HSPs)
scaffold0621 (10-228)||(939-1157)
scaffold0621 (10-228)||(5356-5574)
[»] scaffold0540 (1 HSPs)
scaffold0540 (8-202)||(10070-10264)
[»] scaffold0420 (1 HSPs)
scaffold0420 (10-224)||(7320-7534)
[»] scaffold0080 (4 HSPs)
scaffold0080 (39-228)||(20886-21075)
scaffold0080 (12-228)||(32803-33019)
scaffold0080 (26-171)||(55575-55721)
scaffold0080 (154-228)||(9448-9522)
[»] chr7 (38 HSPs)
chr7 (12-228)||(15145093-15145309)
chr7 (33-228)||(14043600-14043795)
chr7 (33-228)||(14353630-14353825)
chr7 (33-228)||(11526527-11526722)
chr7 (12-228)||(8711486-8711702)
chr7 (12-228)||(11549275-11549491)
chr7 (12-228)||(13689922-13690138)
chr7 (12-228)||(18586344-18586560)
chr7 (12-228)||(44787524-44787740)
chr7 (12-228)||(15157230-15157446)
chr7 (12-228)||(9592248-9592464)
chr7 (12-228)||(11233386-11233602)
chr7 (27-228)||(10874348-10874549)
chr7 (12-216)||(14958389-14958593)
chr7 (12-228)||(16725626-16725836)
chr7 (12-228)||(17702640-17702850)
chr7 (27-216)||(12691397-12691586)
chr7 (26-228)||(20750309-20750508)
chr7 (122-228)||(14336362-14336468)
chr7 (145-228)||(18181744-18181827)
chr7 (153-228)||(19151034-19151109)
chr7 (42-112)||(15628438-15628508)
chr7 (32-108)||(15115058-15115134)
chr7 (9-127)||(26091047-26091165)
chr7 (159-228)||(12801415-12801484)
chr7 (171-228)||(14256721-14256778)
chr7 (171-228)||(14282525-14282582)
chr7 (26-178)||(12202998-12203150)
chr7 (172-228)||(12693800-12693856)
chr7 (159-214)||(12711834-12711889)
chr7 (9-127)||(49156183-49156301)
chr7 (171-228)||(18050110-18050167)
chr7 (159-214)||(13677469-13677524)
chr7 (162-228)||(15115185-15115251)
chr7 (9-127)||(40924066-40924184)
chr7 (183-224)||(11769955-11769996)
chr7 (159-228)||(14145684-14145753)
chr7 (72-128)||(14145606-14145662)
[»] scaffold0034 (3 HSPs)
scaffold0034 (26-228)||(121332-121534)
scaffold0034 (171-228)||(71452-71509)
scaffold0034 (156-214)||(11276-11334)
[»] scaffold0022 (3 HSPs)
scaffold0022 (8-228)||(42552-42772)
scaffold0022 (8-228)||(76272-76492)
scaffold0022 (12-228)||(33936-34152)
[»] chr1 (31 HSPs)
chr1 (12-228)||(22459313-22459529)
chr1 (12-228)||(22469742-22469958)
chr1 (8-228)||(20247124-20247344)
chr1 (12-228)||(22832392-22832608)
chr1 (26-228)||(21044387-21044589)
chr1 (39-175)||(21752954-21753090)
chr1 (33-228)||(18273729-18273924)
chr1 (33-228)||(22117645-22117840)
chr1 (12-228)||(19110276-19110492)
chr1 (12-228)||(16346830-16347046)
chr1 (12-228)||(16353479-16353695)
chr1 (12-228)||(21843119-21843335)
chr1 (27-225)||(16380019-16380218)
chr1 (12-228)||(41349905-41350121)
chr1 (12-228)||(22434988-22435192)
chr1 (12-228)||(21834209-21834425)
chr1 (32-228)||(17041249-17041445)
chr1 (26-228)||(33387265-33387467)
chr1 (12-228)||(21177277-21177487)
chr1 (12-228)||(51329728-51329944)
chr1 (12-228)||(24784095-24784311)
chr1 (26-228)||(21738272-21738471)
chr1 (26-128)||(21741885-21741987)
chr1 (26-91)||(22401241-22401306)
chr1 (8-127)||(36213045-36213164)
chr1 (159-217)||(16670219-16670277)
chr1 (9-127)||(48426811-48426929)
chr1 (159-217)||(20853013-20853071)
chr1 (38-120)||(20922375-20922457)
chr1 (8-108)||(20397940-20398040)
chr1 (9-125)||(31536333-31536449)
[»] scaffold0075 (1 HSPs)
scaffold0075 (33-228)||(54636-54831)
[»] scaffold0008 (3 HSPs)
scaffold0008 (33-224)||(15780-15971)
scaffold0008 (12-228)||(773-989)
scaffold0008 (32-228)||(138763-138959)
[»] scaffold0090 (2 HSPs)
scaffold0090 (8-202)||(30189-30383)
scaffold0090 (134-228)||(1779-1873)
[»] scaffold0447 (1 HSPs)
scaffold0447 (33-228)||(1177-1372)
[»] scaffold0383 (1 HSPs)
scaffold0383 (33-228)||(4041-4236)
[»] scaffold0029 (3 HSPs)
scaffold0029 (13-228)||(9139-9354)
scaffold0029 (12-228)||(106941-107157)
scaffold0029 (54-217)||(93078-93232)
[»] scaffold0218 (1 HSPs)
scaffold0218 (8-202)||(23916-24110)
[»] scaffold1459 (1 HSPs)
scaffold1459 (12-228)||(256-472)
[»] scaffold0423 (1 HSPs)
scaffold0423 (8-228)||(796-1016)
[»] scaffold0393 (1 HSPs)
scaffold0393 (12-228)||(355-571)
[»] scaffold0261 (5 HSPs)
scaffold0261 (12-228)||(163-379)
scaffold0261 (153-228)||(11581-11656)
scaffold0261 (26-109)||(11697-11780)
scaffold0261 (153-228)||(19761-19836)
scaffold0261 (26-109)||(19877-19960)
[»] scaffold0411 (1 HSPs)
scaffold0411 (8-214)||(9331-9537)
[»] scaffold0114 (1 HSPs)
scaffold0114 (8-214)||(16527-16733)
[»] scaffold0501 (1 HSPs)
scaffold0501 (12-228)||(766-982)
[»] scaffold0280 (1 HSPs)
scaffold0280 (12-228)||(23390-23606)
[»] scaffold0198 (1 HSPs)
scaffold0198 (12-228)||(31211-31427)
[»] scaffold0006 (1 HSPs)
scaffold0006 (12-228)||(105119-105335)
[»] scaffold0102 (2 HSPs)
scaffold0102 (12-211)||(49526-49725)
scaffold0102 (171-228)||(43777-43834)
[»] scaffold0403 (2 HSPs)
scaffold0403 (8-202)||(15831-16025)
scaffold0403 (12-228)||(492-708)
[»] scaffold0081 (2 HSPs)
scaffold0081 (70-228)||(22587-22745)
scaffold0081 (70-228)||(38011-38169)
[»] scaffold1220 (1 HSPs)
scaffold1220 (12-228)||(660-876)
[»] scaffold0357 (1 HSPs)
scaffold0357 (33-228)||(17142-17336)
[»] scaffold0293 (2 HSPs)
scaffold0293 (33-228)||(16355-16550)
scaffold0293 (26-228)||(9268-9470)
[»] scaffold0042 (3 HSPs)
scaffold0042 (26-228)||(35984-36186)
scaffold0042 (40-118)||(27304-27382)
scaffold0042 (153-228)||(27411-27486)
[»] scaffold0476 (1 HSPs)
scaffold0476 (39-228)||(11717-11906)
[»] scaffold0273 (2 HSPs)
scaffold0273 (48-228)||(9384-9564)
scaffold0273 (12-107)||(955-1050)
[»] scaffold0064 (1 HSPs)
scaffold0064 (12-228)||(65694-65910)
[»] scaffold0077 (1 HSPs)
scaffold0077 (33-228)||(56819-57014)
[»] scaffold0412 (1 HSPs)
scaffold0412 (12-228)||(14752-14968)
[»] scaffold0282 (1 HSPs)
scaffold0282 (33-228)||(12762-12957)
[»] scaffold0180 (1 HSPs)
scaffold0180 (33-228)||(30224-30419)
[»] scaffold0297 (2 HSPs)
scaffold0297 (26-228)||(11594-11790)
scaffold0297 (15-117)||(6932-7034)
[»] scaffold0018 (1 HSPs)
scaffold0018 (26-228)||(8514-8716)
[»] scaffold0017 (4 HSPs)
scaffold0017 (12-222)||(194038-194248)
scaffold0017 (12-228)||(16230-16446)
scaffold0017 (12-228)||(20752-20968)
scaffold0017 (171-228)||(3621-3678)
[»] scaffold0001 (2 HSPs)
scaffold0001 (26-228)||(442590-442792)
scaffold0001 (11-108)||(167468-167565)
[»] scaffold0451 (1 HSPs)
scaffold0451 (12-228)||(13194-13410)
[»] scaffold0431 (1 HSPs)
scaffold0431 (12-228)||(11288-11504)
[»] scaffold0010 (4 HSPs)
scaffold0010 (12-228)||(15348-15564)
scaffold0010 (12-228)||(22112-22328)
scaffold0010 (33-228)||(5860-6055)
scaffold0010 (159-217)||(180023-180081)
[»] scaffold0003 (2 HSPs)
scaffold0003 (12-228)||(138610-138826)
scaffold0003 (26-228)||(425237-425439)
[»] scaffold0413 (1 HSPs)
scaffold0413 (34-205)||(4488-4659)
[»] scaffold0044 (2 HSPs)
scaffold0044 (12-228)||(18084-18300)
scaffold0044 (26-76)||(6930-6980)
[»] scaffold0040 (3 HSPs)
scaffold0040 (120-228)||(104724-104832)
scaffold0040 (78-224)||(21123-21269)
scaffold0040 (26-73)||(18783-18830)
[»] scaffold0009 (1 HSPs)
scaffold0009 (12-228)||(229016-229232)
[»] scaffold0309 (1 HSPs)
scaffold0309 (71-186)||(20079-20194)
[»] scaffold0028 (3 HSPs)
scaffold0028 (26-228)||(12387-12589)
scaffold0028 (12-228)||(55925-56141)
scaffold0028 (12-228)||(21901-22117)
[»] scaffold1274 (1 HSPs)
scaffold1274 (26-228)||(555-751)
[»] scaffold0305 (1 HSPs)
scaffold0305 (13-228)||(3780-3995)
[»] scaffold0074 (1 HSPs)
scaffold0074 (27-127)||(7050-7150)
[»] scaffold0046 (2 HSPs)
scaffold0046 (26-228)||(71046-71245)
scaffold0046 (27-228)||(868-1069)
[»] scaffold0395 (2 HSPs)
scaffold0395 (33-148)||(15767-15882)
scaffold0395 (172-228)||(15714-15770)
[»] scaffold0289 (1 HSPs)
scaffold0289 (27-228)||(727-922)
[»] scaffold0169 (1 HSPs)
scaffold0169 (33-228)||(35391-35574)
[»] scaffold0007 (2 HSPs)
scaffold0007 (12-213)||(49586-49787)
scaffold0007 (26-226)||(162174-162374)
[»] scaffold0609 (1 HSPs)
scaffold0609 (36-228)||(8505-8697)
[»] scaffold0109 (3 HSPs)
scaffold0109 (12-228)||(42076-42292)
scaffold0109 (173-228)||(12296-12351)
scaffold0109 (12-89)||(12427-12504)
[»] scaffold0079 (1 HSPs)
scaffold0079 (90-228)||(37440-37578)
[»] scaffold0819 (1 HSPs)
scaffold0819 (12-228)||(1027-1237)
[»] scaffold0177 (1 HSPs)
scaffold0177 (12-228)||(14211-14421)
[»] scaffold0342 (2 HSPs)
scaffold0342 (33-177)||(13480-13624)
scaffold0342 (194-228)||(13441-13475)
[»] scaffold0165 (1 HSPs)
scaffold0165 (26-228)||(16875-17074)
[»] scaffold0011 (1 HSPs)
scaffold0011 (33-228)||(22697-22892)
[»] scaffold0556 (1 HSPs)
scaffold0556 (101-175)||(5758-5832)
[»] scaffold0230 (1 HSPs)
scaffold0230 (42-228)||(17523-17709)
[»] scaffold0656 (1 HSPs)
scaffold0656 (12-224)||(231-437)
[»] scaffold0331 (1 HSPs)
scaffold0331 (27-228)||(14167-14368)
[»] scaffold0069 (1 HSPs)
scaffold0069 (72-228)||(33543-33699)
[»] scaffold0410 (2 HSPs)
scaffold0410 (12-127)||(1065-1180)
scaffold0410 (145-228)||(1186-1269)
[»] scaffold0671 (1 HSPs)
scaffold0671 (42-120)||(3886-3964)
[»] scaffold0053 (2 HSPs)
scaffold0053 (12-228)||(61939-62152)
scaffold0053 (162-217)||(64500-64555)
[»] scaffold1257 (1 HSPs)
scaffold1257 (33-220)||(159-343)
[»] scaffold0181 (1 HSPs)
scaffold0181 (148-228)||(28155-28235)
[»] scaffold2059 (1 HSPs)
scaffold2059 (12-127)||(35-150)
[»] scaffold1600 (2 HSPs)
scaffold1600 (36-119)||(1005-1088)
scaffold1600 (153-224)||(1117-1188)
[»] scaffold0227 (1 HSPs)
scaffold0227 (42-177)||(26835-26970)
[»] scaffold0130 (1 HSPs)
scaffold0130 (12-127)||(7044-7159)
[»] scaffold0019 (1 HSPs)
scaffold0019 (12-127)||(172043-172158)
[»] scaffold0848 (2 HSPs)
scaffold0848 (11-109)||(4294-4392)
scaffold0848 (162-228)||(4178-4244)
[»] scaffold0371 (2 HSPs)
scaffold0371 (32-186)||(1740-1894)
scaffold0371 (182-228)||(4494-4540)
[»] scaffold0266 (1 HSPs)
scaffold0266 (26-228)||(17575-17771)
[»] scaffold0285 (1 HSPs)
scaffold0285 (12-169)||(5922-6078)
[»] scaffold0429 (1 HSPs)
scaffold0429 (36-112)||(702-778)
[»] scaffold0100 (1 HSPs)
scaffold0100 (42-228)||(11081-11261)
[»] scaffold1336 (2 HSPs)
scaffold1336 (153-228)||(1750-1825)
scaffold1336 (11-128)||(1832-1949)
[»] scaffold1032 (1 HSPs)
scaffold1032 (48-205)||(5-159)
[»] scaffold0253 (1 HSPs)
scaffold0253 (153-228)||(4379-4454)
[»] scaffold0049 (1 HSPs)
scaffold0049 (153-228)||(43877-43952)
[»] scaffold0751 (1 HSPs)
scaffold0751 (26-228)||(6118-6314)
[»] scaffold0243 (1 HSPs)
scaffold0243 (106-228)||(23360-23481)
[»] scaffold0505 (1 HSPs)
scaffold0505 (42-127)||(2704-2789)
[»] scaffold0348 (1 HSPs)
scaffold0348 (171-228)||(16376-16433)
[»] scaffold0058 (1 HSPs)
scaffold0058 (171-228)||(23202-23259)
[»] scaffold0055 (1 HSPs)
scaffold0055 (12-161)||(23168-23317)
[»] scaffold0052 (1 HSPs)
scaffold0052 (12-161)||(8157-8306)
[»] scaffold0529 (1 HSPs)
scaffold0529 (56-228)||(6064-6236)
[»] scaffold0026 (1 HSPs)
scaffold0026 (26-228)||(52590-52789)
[»] scaffold0004 (1 HSPs)
scaffold0004 (48-214)||(320203-320366)
[»] scaffold0546 (2 HSPs)
scaffold0546 (173-228)||(956-1011)
scaffold0546 (12-89)||(803-880)
[»] scaffold0056 (1 HSPs)
scaffold0056 (153-228)||(50-125)
[»] scaffold0586 (1 HSPs)
scaffold0586 (162-228)||(635-701)
[»] scaffold0149 (1 HSPs)
scaffold0149 (182-228)||(28935-28981)
[»] scaffold2062 (1 HSPs)
scaffold2062 (153-214)||(53-114)
[»] scaffold0523 (1 HSPs)
scaffold0523 (26-127)||(6375-6476)
[»] scaffold0434 (1 HSPs)
scaffold0434 (159-228)||(5069-5138)
[»] scaffold0239 (1 HSPs)
scaffold0239 (171-228)||(8966-9023)
[»] scaffold0067 (4 HSPs)
scaffold0067 (171-228)||(48347-48404)
scaffold0067 (171-228)||(57381-57438)
scaffold0067 (171-228)||(63769-63826)
scaffold0067 (9-108)||(30545-30644)
[»] scaffold0031 (1 HSPs)
scaffold0031 (159-228)||(116692-116761)
[»] scaffold0020 (2 HSPs)
scaffold0020 (11-225)||(176901-177112)
scaffold0020 (171-214)||(97788-97831)
[»] scaffold0161 (1 HSPs)
scaffold0161 (41-228)||(36736-36923)
[»] scaffold0148 (2 HSPs)
scaffold0148 (153-228)||(7130-7205)
scaffold0148 (32-118)||(7015-7101)
[»] scaffold1056 (1 HSPs)
scaffold1056 (34-128)||(2662-2756)
[»] scaffold0443 (1 HSPs)
scaffold0443 (9-127)||(12325-12443)
[»] scaffold0203 (1 HSPs)
scaffold0203 (159-217)||(3261-3319)
[»] scaffold1979 (1 HSPs)
scaffold1979 (171-228)||(237-294)
[»] scaffold1914 (1 HSPs)
scaffold1914 (171-228)||(403-460)
[»] scaffold0664 (1 HSPs)
scaffold0664 (160-217)||(526-583)
[»] scaffold0005 (1 HSPs)
scaffold0005 (171-228)||(264306-264363)
[»] scaffold0192 (1 HSPs)
scaffold0192 (12-128)||(30450-30566)
[»] scaffold0104 (1 HSPs)
scaffold0104 (24-76)||(42735-42787)
[»] scaffold0765 (1 HSPs)
scaffold0765 (177-228)||(5430-5481)
[»] scaffold0317 (1 HSPs)
scaffold0317 (159-214)||(3688-3743)
[»] scaffold0301 (1 HSPs)
scaffold0301 (153-220)||(1152-1219)
[»] scaffold0054 (1 HSPs)
scaffold0054 (12-225)||(62709-62919)
[»] scaffold1061 (1 HSPs)
scaffold1061 (153-214)||(467-528)
[»] scaffold0139 (1 HSPs)
scaffold0139 (165-214)||(16980-17029)
[»] scaffold2165 (1 HSPs)
scaffold2165 (8-108)||(87-187)


Alignment Details
Target: scaffold0071 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 3145 - 3365
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  3145 tgaacactgcatcacgcggaaaaccctctcaatctctttgagccacgtctgggctccatcagggtcatatcttcccttgagagtaggaggatgattcctc 3244  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||     
T  3245 cgaaaggtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctgatgtccaacagcttgagctacagcttctagtgcagcagcaatca 3344  T
Q  208 cagcatcgtttcttccagcca 228  Q
    || ||||||||||||||||||    
T  3345 caacatcgtttcttccagcca 3365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 4e-93; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 15459046 - 15458826
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  15459046 tgaacactgcatcacgcggaaaaccctctcaatctctttgagccacgtctgggctccatcagggtcatatcttcccttgagagtaggaggatgattcctc 15458947  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||     
T  15458946 cgaaaggtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctgatgtccaacagcttgagctacagcttctagtgcagcagcaatca 15458847  T
Q  208 cagcatcgtttcttccagcca 228  Q
    || ||||||||||||||||||    
T  15458846 caacatcgtttcttccagcca 15458826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 17498201 - 17498421
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  17498201 tgaacactgcatcacgcagaaaaccttctaaatctccttgagccacgtctgggctccatcagggtcatatcttcccttgaaagtaggaggatgatccctc 17498300  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||||||||||||||||||| || || ||||| ||||||||||||||||||| ||| |||||||| |||||||||| |||| |||||||||||| | ||    
T  17498301 agaaaggtctctagcatcctcccttcaacacttccaccagcattcgcattaggctgtcgtcccacaacttgagctacggcttgtagtgcagcagctaacg 17498400  T
Q  208 cagcatcgtttcttccagcca 228  Q
    |||  ||||||||||||||||    
T  17498401 cagtgtcgtttcttccagcca 17498421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 11861866 - 11862082
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||| |||||| | ||||| |||||| ||||| || ||||||||||| |||| |||| |||||||||||||||||||||||||| ||||||||||||  |    
T  11861866 cactacatcacacggaaaatcctctcgatctccttaagccacgtctgggctcgatcagggtcatatcttcccttgaaagtaggaggatgattcctcatga 11861965  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| ||||||||||   ||||| |  | |||||||| |||||||| ||||||||||||||||| ||||| |||| |||||||||||| | | || |    
T  11861966 aggtctcaagcatcctcgtctcagcattcactccagcatttgcattaggctgttgtcccacagcttgggctacggcttgtagtgcagcagctaacacatc 11862065  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  11862066 atcgtttcttccagcca 11862082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 14578041 - 14577821
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||| || |  |||| |||||| ||||| ||||||||||| |||||| ||||| ||||||| ||||| |||||   | || |||||||||||    
T  14578041 tgaacactgcatgaccctaaaaatcctctcgatctccttgagccacgtttgagctacatcagggtcataccttcctttgaacacaagaggatgattcctc 14577942  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    | ||| ||||||||||||||| |  ||||| ||||||| ||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  14577941 aaaaaagtctctagcatcctcacatcagcatttgcacccgcattagcattaggctgttgtcccacagcttgagcaacagcttccagtgcagcagcaatcg 14577842  T
Q  208 cagcatcgtttcttccagcca 228  Q
     ||| |||||||| |||||||    
T  14577841 tagcgtcgtttctaccagcca 14577821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 228
Target Start/End: Complemental strand, 14873186 - 14872986
Alignment:
Q  27 aaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcc 126  Q
    ||||| ||||| ||||| || ||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||  |||| |||| |||||||    
T  14873186 aaaactctctcgatctccttaagccacgtctgggctccatcggggtcatatcttcccttgaaagtaggaggatgattcctcgtaaag-tctcaagcatcc 14873088  T
Q  127 tcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagc 226  Q
    |||   ||||| |  |||||||||| |||||||||||||| ||||||||||||||||| |||| ||||  |||||| |  ||||||||||||||||||||    
T  14873087 tcgtctcagcattcacaccagcatttgcattaggttgttgccccacagcttgagctacggcttgtagtttagcagctaatgcagcatcgtttcttccagc 14872988  T
Q  227 ca 228  Q
    ||    
T  14872987 ca 14872986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 12890220 - 12890436
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  12890220 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagttggagggttcttcttcatga 12890319  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||||||||| || ||||||||||||||||||||||| || ||||||| |||||||||||| | ||||||    
T  12890320 aagtctccaacatcctagcttcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagtgcagcagctaacgcagc 12890419  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  12890420 atcgtttcttccagcca 12890436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 15586011 - 15585795
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  15586011 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 15585912  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  15585911 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 15585812  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  15585811 atcgtttcttccagcca 15585795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 15712675 - 15712459
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || ||||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||||||| | |  ||| |||  |    
T  15712675 cactgcataacccagaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtaggagggttcttcttcatga 15712576  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || ||||||| ||| ||| |||| | ||||||    
T  15712575 aagtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcaacagctaacgcagc 15712476  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  15712475 atcgtttcttccagcca 15712459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 6597566 - 6597782
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||  ||| | |  ||| |||  |    
T  6597566 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagccggagggttcttcttcatga 6597665  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  6597666 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 6597765  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  6597766 atcgtttcttccagcca 6597782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 20058673 - 20058457
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  20058673 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 20058574  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  20058573 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 20058474  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  20058473 atcgtttcttccagcca 20058457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 23078590 - 23078414
Alignment:
Q  48 agccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccag 147  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||   ||||| |  ||||||    
T  23078590 agccacgtctgggctccatcggggtcatatcttcccttgaaagtaggaggatgattcctcataaaagtctcaagcatcctcgtctcagcattcacaccag 23078491  T
Q  148 cattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttcca 224  Q
    |||| |||||||| |||||||||||  |||| ||||| |||| |||||||||||| | |||| |||| |||||||||    
T  23078490 catttgcattaggctgttgtcccacgacttgtgctacggcttatagtgcagcagctaacgcaacatcatttcttcca 23078414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 15263156 - 15263351
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||||||| ||||||||||||||||||||| |||| || ||||| |||||||||||  |||||||||||||||| ||||| | ||||||  |      
T  15263156 ctctcaatctctttcagccacgtctgagctccatcagggtcgtaccttcctttgaaagtaggcggatgattcctcagaaaagtctccaacatcctaacct 15263255  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | ||||| || || | |||||| || |||||||||||||||   ||| |||| | |||||||||||||||||| ||||||||||||||||    
T  15263256 cagcattagcacccgcgttagtattaggctgatgtcccacagcttgaaacacaacttccaatgcagcagcaatcgcagcgtcgtttcttccagcca 15263351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 15263968 - 15264163
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||||||| ||||||||||||||||||||| |||| || ||||| |||||||||||  |||||||||||||||| ||||| | ||||||  |      
T  15263968 ctctcaatctctttcagccacgtctgagctccatcagggtcgtaccttcctttgaaagtaggcggatgattcctcagaaaagtctccaacatcctaacct 15264067  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | ||||| || || | |||||| || |||||||||||||||   ||| |||| | |||||||||||||||||| ||||||||||||||||    
T  15264068 cagcattagcacccgcgttagtattaggctgatgtcccacagcttgaaacacaacttccaatgcagcagcaatcgcagcgtcgtttcttccagcca 15264163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 23414406 - 23414201
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| ||| ||||||||||| ||||||||||| |||||||   ||||||||||||| |||||||| ||| ||||||||||||  |    
T  23414406 cactgcatcacacggaaaatcctttcaatctcttttagccacgtctgggctccattggggtcatatcttcctttgaaagttggaggatgattcctcatga 23414307  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  |||||||||| || |||||||||||||||||||| || || ||||||| ||| |||||||| | ||||||    
T  23414306 aggtctccaacatcctggtctcagcattcacaccagcatttgcgttaggttgttgtcccacagcatgggcaacagcttgtagagcagcagctaacgcagc 23414207  T
Q  212 atcgtt 217  Q
    ||||||    
T  23414206 atcgtt 23414201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 3689454 - 3689670
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||| ||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  3689454 cactgcataactcggaaaatcctctccatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 3689553  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| ||||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  3689554 acgtctccaacatcctagcttcagcatttgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 3689653  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  3689654 atcgttccttccagcca 3689670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 5421549 - 5421333
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  5421549 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 5421450  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||| |||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  5421449 acgtctccaacatcctagcttcagcattcgcaccggcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 5421350  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  5421349 atcgtttcttccagcca 5421333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 6604246 - 6604462
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||  ||| | |  ||| |||  |    
T  6604246 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagccggagggttcttcttcatga 6604345  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | |||||||||||||||||| |||| || ||||||| ||| |||||||| | ||||||    
T  6604346 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacaacttgggcaacagcttgtagagcagcagctaacgcagc 6604445  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  6604446 atcgtttcttccagcca 6604462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 13249555 - 13249771
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  13249555 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 13249654  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  13249655 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 13249754  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  13249755 atcattccttccagcca 13249771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 13256201 - 13256417
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  13256201 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 13256300  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  13256301 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 13256400  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  13256401 atcattccttccagcca 13256417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 16639284 - 16639500
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  16639284 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 16639383  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  16639384 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 16639483  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  16639484 atcattccttccagcca 16639500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 16753320 - 16753104
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||  ||| | |  ||| |||  |    
T  16753320 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagccggagggttcttcttcatga 16753221  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  16753220 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 16753121  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  16753120 atcgtttcttccagcca 16753104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 43166186 - 43166402
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  43166186 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 43166285  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  43166286 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 43166385  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  43166386 atcattccttccagcca 43166402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 15399124 - 15398922
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| ||||||| ||||||| ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  || ||||| | ||||    
T  15399124 gaaaatcctctcagtctctttcagccacgtctgggctccatcagggtcataacgtcctttgaaagttggagggttcttcttcatgaaagtctccaacatc 15399025  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    || ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||||||||||| ||||    
T  15399024 ctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcgtttctgccag 15398925  T
Q  226 cca 228  Q
    |||    
T  15398924 cca 15398922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 15066582 - 15066792
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | |||||| ||||||||| | || ||||||||||||||||||||  | |||||||| |||||||| |||||| ||||||||||||  |    
T  15066582 cactgcatcacacggaaaactctctcaatcaccttaagccacgtctgagctccatctggatcatatctccccttgaaggtaggaggatgattcctcatga 15066681  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| ||||||||||   ||||| |  |||||      |||||||| || ||||| | |||||| ||||||| |||||||||||||||||| |||||    
T  15066682 aagtctcaagcatcctcgtctcagcattcacacca------gcattaggctgatgtccaatagcttgtgctacagtttctagtgcagcagcaatagcagc 15066775  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  15066776 atcgttccttccagcca 15066792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 228
Target Start/End: Complemental strand, 26790012 - 26789816
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  || ||||| | |||||| |||    
T  26790012 cctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatgaacgtctccaacatcctagct 26789913  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     ||||| | ||||| |||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | |||||||||||||||||||||||    
T  26789912 tcagcattcgcaccggcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcgtttcttccagcca 26789816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 53381638 - 53381422
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||| | ||| | |  ||| |||  |    
T  53381638 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcatagcgtcctttgaaaatcggagggttcttcttcatga 53381539  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | ||| || ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  53381538 acgtctccaacattctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 53381439  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  53381438 atcgttccttccagcca 53381422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 228
Target Start/End: Complemental strand, 5108143 - 5107942
Alignment:
Q  27 aaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcc 126  Q
    |||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  || ||||| | |||||    
T  5108143 aaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatgaacgtctccaacatcc 5108044  T
Q  127 tcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagc 226  Q
    | ||| ||||| | ||||| |||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||||| |||||||||||    
T  5108043 tagcttcagcattcgcaccggcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcatttcttccagc 5107944  T
Q  227 ca 228  Q
    ||    
T  5107943 ca 5107942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 15359563 - 15359777
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||| | ||||||  ||||||||||| ||||||||| ||||||| ||||| |||||||| ||| | |  ||| |||  |    
T  15359563 cactgcataacccggaaaatcctcttagtctctt--agccacgtctgggctccatcagggtcataacttcctttgaaagttggagggttcttcttcatga 15359660  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | |||| |    
T  15359661 aagtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcaac 15359760  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  15359761 atcgtttcttccagcca 15359777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 10909721 - 10909937
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  10909721 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 10909820  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||| ||| ||| |||||||| | || |||    
T  10909821 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaacgtagc 10909920  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  10909921 atcattccttccagcca 10909937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 48428958 - 48429174
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  48428958 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 48429057  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || |||||||  || |||||||| | ||||||    
T  48429058 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgaagagcagcagctaacgcagc 48429157  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  48429158 atcattccttccagcca 48429174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 228
Target Start/End: Complemental strand, 5110013 - 5109812
Alignment:
Q  27 aaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcc 126  Q
    |||| |||||||||||| || ||||||||||  ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  || ||||| | |||||    
T  5110013 aaaatcctctcaatctccttaagccacgtctaggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatgaacgtctccaacatcc 5109914  T
Q  127 tcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagc 226  Q
    | ||| ||||| | ||||| |||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||||| |||||||||||    
T  5109913 tagcttcagcattcgcaccggcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcatttcttccagc 5109814  T
Q  227 ca 228  Q
    ||    
T  5109813 ca 5109812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 228
Target Start/End: Original strand, 15231147 - 15231343
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    ||||||||  |||||||||||| ||||||||||| || | |||||||| || |||||||| ||  ||||||| |||||||| || || | || |||| ||    
T  15231147 cctctcaacttctttgagccacttctgagctccaccaggatcatatctacctttgaaagttggtggatgatttctcagaaaagtttccaacaacctcact 15231246  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     || |  |||||||||||   |||||  |||| ||||| |||||||||||||||||||  |||||||||||||| ||||||||||| ||||||||||    
T  15231247 ccatcgtttgcaccagcaccagcattccgttgctgtcctacagcttgagctacagcttgcagtgcagcagcaatagcagcatcgttccttccagcca 15231343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 228
Target Start/End: Original strand, 15237015 - 15237211
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    ||||||||  |||||||||||| ||||||||||| || | |||||||| || |||||||| ||  ||||||| |||||||| || || | || |||| ||    
T  15237015 cctctcaacttctttgagccacttctgagctccaccaggatcatatctacctttgaaagttggtggatgatttctcagaaaagtttccaacaacctcact 15237114  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     || |  |||||||||||   |||||  |||| ||||| |||||||||||||||||||  |||||||||||||| ||||||||||| ||||||||||    
T  15237115 ccatcgtttgcaccagcaccagcattccgttgctgtcctacagcttgagctacagcttgcagtgcagcagcaatagcagcatcgttccttccagcca 15237211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 15344864 - 15344648
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| |||||||   ||| ||||| || ||| | |  ||| |||  |    
T  15344864 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataatgtcctttgaaggtcggagggttcttcttcatga 15344765  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| | ||  | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  15344764 acgtctccaacatcctagcttccgcgttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 15344665  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  15344664 atcgtttcttccagcca 15344648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 222
Target Start/End: Original strand, 16695678 - 16695888
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| |||||| ||||| || | ||| ||||||||||| ||  |||||||| | || ||||||||  || ||||||||||||  |    
T  16695678 cactgcatcacacggaaaatcctctccatctccttaatccaagtctgagctccgtcggggtcatatatccctttgaaagttagaggatgattcctcatga 16695777  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  |||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||| | | ||||||    
T  16695778 aggtctccaacatcctggtctcagcattcacaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcacctaacgcagc 16695877  T
Q  212 atcgtttcttc 222  Q
    |||||||||||    
T  16695878 atcgtttcttc 16695888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 228
Target Start/End: Complemental strand, 12508146 - 12507954
Alignment:
Q  36 tcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacag 135  Q
    |||| |||||||||||||||||||||||||||| ||||| | ||||| |||||||||||  ||||||| |||| ||| || || | ||| ||  |  ||     
T  12508146 tcaacctctttgagccacgtctgagctccatcagggtcacaccttcctttgaaagtaggtggatgatttctcaaaaaagtttccaacattctaacctcac 12508047  T
Q  136 cacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||| |||||||||   |||||||| ||||| |||||| ||||||| ||| |||| | |||||||||||| ||||| || |||||||||||||    
T  12508046 cactagcaccagcaccagcattaggctgttgccccacaacttgagccacaacttccaatgcagcagcaatagcagcgtcatttcttccagcca 12507954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 35983719 - 35983918
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| ||||||||||||| |||||||||||||| ||||||| || || || || || ||  |||| ||||||||||||||||| | ||||    
T  35983719 gaaaatcctctcaacctctttgagccacttctgagctccatcagggtcatacctccctttaaatgttggtggatggttcctcagaaaggtctccaacatc 35983818  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||| |  || || |   |||||||   ||||| ||||| ||||| | ||||||||| |||||||| |||||||||||||| || ||||||||||| ||||    
T  35983819 ctcacaccatcatt---accagcaacagcattcggttgctgtcctatagcttgagcaacagcttcaagtgcagcagcaatagctgcatcgtttctcccag 35983915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 19728294 - 19728369
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||  ||||||||||||    
T  19728294 ctctcaatctctttgagccacgtctgagctccatcagggtcataccttcctttgaaagtaggcggatgattcctca 19728369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 10009111 - 10009327
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||| ||| || ||||||||||| ||||||||| ||||||| | ||| ||||| || ||| | |  ||| |||  |    
T  10009111 cactgcataactcggaaaatcctctcaagctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaggtcggagggttcttcttcatga 10009210  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| | ||  | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| |  |||||    
T  10009211 acgtctccaacatcctagcttccgcgttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaatgcagc 10009310  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  10009311 atcattccttccagcca 10009327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 12842706 - 12842627
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaa 112  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||| || |||| |||||||||||    
T  12842706 ctctcaatctccatgagccacgtctgagctccatcagggtcatatcttcctttgaaagtatgaggatggttcctcagaaa 12842627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 12502482 - 12502621
Alignment:
Q  83 cttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagct 182  Q
    ||||||||||||| ||||||||||||  || ||||| ||||||||||   ||||| |  ||||||||||      ||| || ||||| | |||||| |||    
T  12502482 cttgaaagtaggaggatgattcctcatgaaagtctcaagcatcctcgtctcagcattcacaccagcatt------aggctgatgtccaatagcttgtgct 12502575  T
Q  183 acagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||  | ||||||||||||||||||||||||||||||||||||||    
T  12502576 acagtatatagtgcagcagcaatcgcagcatcgtttcttccagcca 12502621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 24186794 - 24186880
Alignment:
Q  142 caccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||| |||||||||||| |||||||||| || ||||||| ||| |||||||| | |||||||| ||| ||||||||||    
T  24186794 caccagcattcgcgttaggttgttgttccacagcttgggcaacagcttgtagagcagcagctaacgcagcatagttccttccagcca 24186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 12273410 - 12273479
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||||| |||||||    
T  12273410 ggttgatgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcagcatcgtttctaccagcca 12273479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 16490790 - 16490726
Alignment:
Q  164 ttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||| || ||||||| ||| |||||||| | |||||||||||||||||||||||    
T  16490790 ttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcgtttcttccagcca 16490726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 220
Target Start/End: Complemental strand, 12857115 - 12856913
Alignment:
Q  15 tgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaagg 114  Q
    |||||||| | |||||  ||||||| ||| ||||||||| | || ||||||||| ||||||| || || ||||| || ||  ||||||||||||||||||    
T  12857115 tgcatcaccctgaaaattctctcaacctccttgagccacttttgggctccatcaaggtcatacctccctttgaatgttggtggatgattcctcagaaagg 12857016  T
Q  115 tctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    | || ||||| |||   ||| ||     |||||||   ||||| || |||||||| ||||||||||| |||||||| ||||||||| ||||  |||||||    
T  12857015 tttccagcattctc---acaccatcgttaccagcaccagcattcggctgttgtcctacagcttgagcaacagcttccagtgcagcaacaataacagcatc 12856919  T
Q  215 gtttct 220  Q
     |||||    
T  12856918 atttct 12856913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 2036370 - 2036304
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| ||||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||    
T  2036370 tgttgtcctacagcttgagctacagcctcaagcgcagcagcaatagcagcatcatttctcccagcca 2036304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 2040111 - 2040045
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| ||||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||    
T  2040111 tgttgtcctacagcttgagctacagcctcaagcgcagcagcaatagcagcatcatttctcccagcca 2040045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 14040417 - 14040483
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| ||||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||    
T  14040417 tgttgtcctacagcttgagctacagcctcaagcgcagcagcaatagcagcatcatttctcccagcca 14040483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 13027947 - 13027811
Alignment:
Q  41 ctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcactt 140  Q
    ||||||||||||||  |||||||||||  | ||||| || || |||||||||||  | |||||||||| ||| || | || ||||||| || ||||| |     
T  13027947 ctctttgagccacgattgagctccatctggatcatacctccctttgaaagtaggcgggtgattcctcaaaaaagtttataacatcctcacttcagcatta 13027848  T
Q  141 gcaccagcattcgcattaggttgttgtcccacagctt 177  Q
     ||||||||   |||||||||||||| ||||||||||    
T  13027847 acaccagcaccagcattaggttgttgccccacagctt 13027811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 15011421 - 15011365
Alignment:
Q  172 cagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| | || |||||||||||||| |||||||| |||||||||||||    
T  15011421 cagcttgagctacatcctcaagtgcagcagcaatagcagcatcatttcttccagcca 15011365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 10409516 - 10409607
Alignment:
Q  36 tcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcct 127  Q
    |||||||| || |||||  ||||||| |||||| | ||||| || ||||||||||| ||  ||||||||||||| || ||||||||||||||    
T  10409516 tcaatctcctttagccatttctgagcaccatcaggatcatacctacccttgaaagttggtggatgattcctcaggaaagtctctagcatcct 10409607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 10416512 - 10416454
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    ||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  10416512 ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaattgcagcatcgtt 10416454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 14290123 - 14290021
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| |||||||||||||  ||||||||||||| ||||||| || || ||||| || ||  |||| || ||| |||||||||| | ||||    
T  14290123 gaaaatcctctcaacctctttgagccactcctgagctccatcagggtcatacctccctttgaatgttggtggatggtttctccgaaaggtctccaacatc 14290024  T
Q  126 ctc 128  Q
    |||    
T  14290023 ctc 14290021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 28757840 - 28757958
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | ||||| ||| ||||| || || |||||| ||||||| || ||| | ||||| || ||||||||||| ||  ||||||||||||    
T  28757840 gaacactgcatgaccctgaaaatcctttcaatttccttcagccacttctgagcaccgtcaggatcatacctacccttgaaagttggtggatgattcctca 28757939  T
Q  109 gaaaggtctctagcatcct 127  Q
    | || ||||| ||||||||    
T  28757940 ggaaagtctcaagcatcct 28757958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 47127465 - 47127583
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | ||||| ||| ||||| || || |||||| ||||||| || ||| | ||||| || ||||||||||| ||  ||||||||||||    
T  47127465 gaacactgcatgaccctgaaaatcctttcaatttccttcagccacttctgagcaccgtcaggatcatacctacccttgaaagttggtggatgattcctca 47127564  T
Q  109 gaaaggtctctagcatcct 127  Q
    | || ||||| ||||||||    
T  47127565 ggaaagtctcaagcatcct 47127583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 8743845 - 8743788
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| || || |||||||||||||| ||||| |||||||| |||||||    
T  8743845 acagcttgagctacggcctcaagtgcagcagcaatagcagcgtcgtttctaccagcca 8743788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 13945698 - 13945755
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| || || |||||||||||||| ||||||||||| || |||||||    
T  13945698 acagcttgagctacggcctcaagtgcagcagcaatagcagcatcgttcctaccagcca 13945755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 15937848 - 15937779
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||| ||||||||||| ||||| || ||||||||||| || |||||||| ||||| |||||||    
T  15937848 ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcgatagcagcatcatttctaccagcca 15937779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 41179846 - 41179903
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| || || |||||||||||||| ||||||||||| || |||||||    
T  41179846 acagcttgagctacggcctcaagtgcagcagcaatagcagcatcgttcctaccagcca 41179903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 214
Target Start/End: Complemental strand, 31691730 - 31691591
Alignment:
Q  72 tcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtccca 171  Q
    ||||| ||||||||||| |  ||  |||||||||||| ||||||||| ||||||||| || || || |  || |||||   || || ||||| |||   |    
T  31691730 tcataccttcccttgaatgctggtggatgattcctcaaaaaggtctccagcatcctcacttcaccattaccagcagca---gcgttcggttgctgttgta 31691634  T
Q  172 cagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    |||||||||||||||| || |||||||||||||| ||||||||    
T  31691633 cagcttgagctacagcctcaagtgcagcagcaatagcagcatc 31691591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 15935992 - 15935929
Alignment:
Q  165 tgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||||||||| ||||| || ||||||||||| || |||||||| ||||| |||||||    
T  15935992 tgtcctacagcttgagcaacagcctcaagtgcagcagcgattgcagcatcatttctaccagcca 15935929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 16803425 - 16803370
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||||||||| ||||||||||| ||||| || ||||||||||| || ||||||||    
T  16803425 ggttgttgtcctacagcttgagccacagcctcaagtgcagcagcgatggcagcatc 16803370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 31942583 - 31942626
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||||||||||||||| || |||||||||||||| ||||||||    
T  31942583 acagcttgagctacagcctcaagtgcagcagcaatagcagcatc 31942626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 17495170 - 17495280
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||| || | ||||| ||| ||||  || || |||||| |||| || |||||| | ||||| ||||| |||||||| ||  |||||||||||    
T  17495170 tgaacactgcatgaccctgaaaatcctttcaacttccttaagccacttctgggcgccatcaggatcataccttcctttgaaagttggtggatgattcctc 17495269  T
Q  108 agaaaggtctc 118  Q
    | |||||||||    
T  17495270 aaaaaggtctc 17495280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 13304254 - 13304193
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||| ||||| ||||| ||||||||||| ||||| || ||||||||||| || ||||||||    
T  13304254 gcattcggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcgatagcagcatc 13304193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 16383827 - 16383770
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||  || || |||||||||||||| ||||||||||| || |||||||    
T  16383827 acagcttgagctagggcctcaagtgcagcagcaatagcagcatcgttcctaccagcca 16383770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 16824740 - 16824679
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttct 220  Q
    ||||| ||||| ||||||||||| ||||| || |||||||||||||| ||| | ||||||||    
T  16824740 ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcaacgtcgtttct 16824679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 16824870 - 16824769
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| ||| ||||||||| |||||||||| | | ||||||| || || || ||||| ||   ||| ||||||||||||||||| | ||||    
T  16824870 gaaaatcctctcaacctccttgagccacttctgagctccgttagggtcatacctccctttaaaagttggtgaatggttcctcagaaaggtctccaacatc 16824771  T
Q  126 ct 127  Q
    ||    
T  16824770 ct 16824769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 19728433 - 19728478
Alignment:
Q  183 acagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| | ||||||||||||| |||| ||||||||||||||||    
T  19728433 acagcttccaatgcagcagcaatcacagcgtcgtttcttccagcca 19728478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 24190863 - 24190943
Alignment:
Q  48 agccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctc 128  Q
    ||||||||||| || |||||  ||||||| ||||||||||| || ||  |||| |||||||  |||||||| |||||||||    
T  24190863 agccacgtctgggcaccatcggggtcataccttcccttgaatgttgggggatggttcctcaagaaggtctccagcatcctc 24190943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 39981 - 39761
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||     
T  39981 tgaacactccatcacgcggaaaaccctctcaatctctttgagccacgtctgagctccataagggtcatatattcccttgaaagtaggaggatgattcctt 39882  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    |||||||||||||||||||||||| ||||||||||||||||||| | |  ||| || ||||| ||||||||||||||||||||||||||| |||||||||    
T  39881 agaaaggtctctagcatcctcgcttcagcacttgcaccagcatttgaaccaggctgatgtccaacagcttgagctacagcttctagtgcatcagcaatcg 39782  T
Q  208 cagcatcgtttcttccagcca 228  Q
    |||||||||||||||||||||    
T  39781 cagcatcgtttcttccagcca 39761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 1e-83; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 18880481 - 18880261
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||||  ||| || |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || |||||||||||    
T  18880481 tgaacactgcatcacgtggaacactctctcaatctctttgagccacgtctgggctccatcagggtcatatcttcccttgaaagtatgaggatgattcctc 18880382  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||| |||||||||||| | ||    
T  18880381 agaaaggtctctagcatcctcgcttcagcacttgcaccagcatttgcattaggctgttgtcccacaacttgagctacagcttgtagtgcagcagctaacg 18880282  T
Q  208 cagcatcgtttcttccagcca 228  Q
    || ||||||||||||||||||    
T  18880281 caacatcgtttcttccagcca 18880261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 6518327 - 6518547
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||| | ||| || ||||| ||||| ||||||| |||||||||||||||| |  ||||||| |||||||||| |||| |||||||||||    
T  6518327 tgaacactgcatcacacggaacactctctctatctccttgagcctcgtctgagctccatcaggaacatatctacccttgaaagcaggaggatgattcctc 6518426  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||||||||||||| || |||| |||||||||||| | ||    
T  6518427 agaaaagtctctagcatcctcgcttcagcatttgcaccagcattcgcattaggctgctgtcccacagcttgagccacggcttgtagtgcagcagctaacg 6518526  T
Q  208 cagcatcgtttcttccagcca 228  Q
    || |||||||||||| |||||    
T  6518527 caacatcgtttcttctagcca 6518547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 228
Target Start/End: Original strand, 21672475 - 21672692
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcaga 110  Q
    ||||||| |||| | ||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| |    
T  21672475 acactgcttcacacggaacactctctcaatctctttgagccacgtctgagctccatcagggtcatatcttcccttgaaaataggaggatgattcctcata 21672574  T
Q  111 aaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcag 210  Q
    || ||||||||||||||| || || || | ||||||||||| |||||||| |||||||||||||||||||| ||| ||| |||||||||||| | ||||     
T  21672575 aaagtctctagcatcctcacttcatcattcgcaccagcatttgcattaggctgttgtcccacagcttgagccacaacttgtagtgcagcagctaacgcat 21672674  T
Q  211 catcgtttcttccagcca 228  Q
    | || |||||||||||||    
T  21672675 cgtcctttcttccagcca 21672692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 22420692 - 22420497
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||| | ||||||| |      
T  22420692 ctctcaatctctttgagccacgtctgagctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcagaaaagtctccaacatcctcacct 22420593  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | ||||||||||| |||||||| || || |||||||||||||| ||| ||||||||||| ||||||| ||| | ||||||||||||||||    
T  22420592 cagcattagcaccagcattagcattaggctgatgccccacagcttgagccacaacttctagtgcaacagcaattgcaacgtcgtttcttccagcca 22420497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 19981928 - 19982144
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | |||||| ||||||||||| || ||||||||||| ||||| ||| |||||||||||||||||||||||||| |||||||||||||||    
T  19981928 cactgcatcacacggaaaactctctcaatctccttaagccacgtctgggctccctcagggtcatatcttcccttgaaagtaggaggatgattcctcagaa 19982027  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    |||| || ||||||||||   ||||| | ||||||||||| |||||||| | ||| ||||||||||||||||| |||  |||||||||| | | |||| |    
T  19982028 aggtttccagcatcctcgactcagcattcgcaccagcatttgcattaggctattgccccacagcttgagctacggctggtagtgcagcacctaacgcaac 19982127  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  19982128 atcgtttcttccagcca 19982144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 26 - 220
Target Start/End: Complemental strand, 21390698 - 21390504
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| |||||||||||||| ||||||||||| ||||||||  |||| |||||||||||||||||| || | ||||||||||| |||||||| ||||||    
T  21390698 gaaaactctctcaatctctttaagccacgtctgggctccatcggggtcgtatcttcccttgaaagtaagagggtgattcctcaggaaggtctcaagcatc 21390599  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttct 220  Q
    ||||   ||||| | |||||| |||| |||||||| ||||||||||||||||||||||| |||| |||||||||||| | |||| ||||||||||    
T  21390598 ctcgactcagcattcgcaccatcatttgcattaggctgttgtcccacagcttgagctacggcttgtagtgcagcagctaacgcatcatcgtttct 21390504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 26 - 220
Target Start/End: Complemental strand, 21780024 - 21779830
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| |||||||||||||| ||||||||||| ||||||||  |||| |||||||||||||||||| || | ||||||||||| |||||||| ||||||    
T  21780024 gaaaactctctcaatctctttaagccacgtctgggctccatcggggtcgtatcttcccttgaaagtaagagggtgattcctcaggaaggtctcaagcatc 21779925  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttct 220  Q
    ||||   ||||| | |||||| |||| |||||||| ||||||||||||||||||||||| |||| |||||||||||| | |||| ||||||||||    
T  21779924 ctcgactcagcattcgcaccatcatttgcattaggctgttgtcccacagcttgagctacggcttgtagtgcagcagctaacgcatcatcgtttct 21779830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 17354704 - 17354508
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| || || ||||| || ||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||  ||||||    
T  17354704 gaaaactctttcgatctccttaagccacgtctgggctccatcggggtcatatcttcccttgaaagtaggaggatgattcctcataaaggtcttaagcatc 17354605  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||||   ||||| | |||||||||||      ||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17354604 ctcgactcagcattcgcaccagcatt------aggctgatgtccaacagcttgtgctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 17354511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 30309964 - 30309748
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| |  |||| ||||||||||||||| ||||||||||| ||||||||  ||||||||||||| |||||||| ||| ||||||| ||||  |    
T  30309964 cactgcatcacacgaaaaatcctctcaatctcttttagccacgtctgggctccatcggggtcatatcttcctttgaaagttggaggatgatttctcatga 30309865  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  ||||||||||||| ||||||||||||||||||||||| || ||| ||| ||| |||||||| | ||||||    
T  30309864 aggtctccaacatcctggtctcagcattcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaacgcagc 30309765  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  30309764 atcgttccttccagcca 30309748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 21163336 - 21163140
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| || || ||||| || ||||||| ||| ||||||||  ||| ||||||||||||||||||||||  ||||||||||| ||||||||| ||||||    
T  21163336 gaaaactctgtcgatctccttaagccacgcctgggctccatcggggtaatatcttcccttgaaagtaggagaatgattcctcataaaggtctcaagcatc 21163237  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttc 222  Q
    ||||   ||||| | ||||||||||| |||||||| ||||| |||| |||||||||||| ||||  ||||||||||| | |||||||||||||||||    
T  21163236 ctcgtctcagcattcgcaccagcatttgcattaggctgttgccccatagcttgagctacggcttgcagtgcagcagctaacgcagcatcgtttcttc 21163140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 22524395 - 22524590
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||| |||||| |||||| | ||| ||| ||||| | ||||||| ||     
T  22524395 ctctctatctctttgagccacgtctgagcttcatcagggtcatatcttcctttgaaggtaggaggatgatacttcataaaagtctccaacatcctcactt 22524494  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | ||||   |||| ||||||||||| || |||||||||||||| |||||||| | | |||||| ||||||||| ||||||||||||||||    
T  22524495 cagcattagcactcacattagcattaggttgatgccccacagcttgagccacagcttccaattcagcagaaatcgcagcgtcgtttcttccagcca 22524590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 228
Target Start/End: Complemental strand, 17829770 - 17829574
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    |||||||||| | || ||||||||||| ||||||||| ||||||||||||| ||||||||  || ||||||| ||||  |||||||| | |||||| |      
T  17829770 cctctcaatcgccttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttcgaggatgatttctcatgaaggtctccaacatcctagtc 17829671  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     ||||| |  |||||||||| |||||||||||||||||||||||||| || ||||||| ||| |||||||| | |||||||||||| ||||||||||    
T  17829670 tcagcagtcacaccagcatttgcattaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcgttccttccagcca 17829574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 32604106 - 32604322
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||| | |||||||||||| || |||||||||||  |||||| | ||||||||||||| |||||||| ||| ||||||| ||||  |    
T  32604106 cactgcatcacacggaatatcctctcaatctccttaagccacgtctggcctccattagggtcatatcttcctttgaaagttggaggatgatttctcatga 32604205  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  ||||| |||| |||||||||||||||||||||||||| || ||||||| ||| |||||||| | | ||||    
T  32604206 aggtctccaacatcctagtctcagcagtcacaccaacatttgcattaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacacagc 32604305  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||| ||||    
T  32604306 atcgtttcttcccgcca 32604322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 19116358 - 19116574
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  19116358 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 19116457  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  19116458 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 19116557  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || || |||||||    
T  19116558 atcattcctcccagcca 19116574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 19480896 - 19480680
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  19480896 cactgcataacacggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 19480797  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || | ||||| ||| ||| |||| | ||||||    
T  19480796 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaatagcttgtagagcaacagctaacgcagc 19480697  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  19480696 atcgtttcttccagcca 19480680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 19497273 - 19497489
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  19497273 cactgcataacacggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 19497372  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || | ||||| ||| ||| |||| | ||||||    
T  19497373 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaatagcttgtagagcaacagctaacgcagc 19497472  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  19497473 atcgtttcttccagcca 19497489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 20015086 - 20014870
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  20015086 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 20014987  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||| |||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  20014986 acgtctccaacatcctagcttcagcattcgcaccggcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 20014887  T
Q  212 atcgtttcttccagcca 228  Q
    ||| |||||||||||||    
T  20014886 atcatttcttccagcca 20014870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 20392068 - 20392263
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||| ||||||||||||| |||||||||||||| | || || ||||| |||||||| ||  ||||||| |||||||| || |  | ||||||| ||     
T  20392068 ctctcaacctctttgagccacttctgagctccatcaggatcgtaccttccattgaaagttggtggatgatttctcagaaaagttttcaacatcctcactc 20392167  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    || || | |||||||||   ||||| || ||||||  ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  20392168 catcattcgcaccagcacctgcattcggctgttgtttcacagcttgggctacagcttcaagtgcagcagcaatagcagcatcgtttcttccagcca 20392263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 15537344 - 15537560
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||||||   ||||| |||||| ||||| || ||||||||||| ||||||||| ||||||||||||| ||||| || ||| ||||||| ||||  |    
T  15537344 cactgcatcacaaggaaaatcctctcgatctccttaagccacgtctgggctccatcagggtcatatcttcctttgaaggttggaggatgatttctcatga 15537443  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  | ||| |||| |||||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  15537444 aggtctccaacatcctagtctcagcattcactccaacatttgcattaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 15537543  T
Q  212 atcgtttcttccagcca 228  Q
    |  ||| ||||||||||    
T  15537544 aaagttccttccagcca 15537560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 22043779 - 22043995
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| |||||| |||||||| ||||||||||| ||||||||  ||||||||||||| |||||||| ||| ||||||||||||  |    
T  22043779 cactgcatcactctgaaaatcctctccatctctttaagccacgtctgggctccatctgggtcatatcttcctttgaaagttggaggatgattcctcatga 22043878  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||||| ||| || |   || |  |  ||||| |||| || |||||||||||||||||||| || || ||||||| ||| || ||||| | |||| |    
T  22043879 aggtctctaacattctagtctcaacgttcacaccaacatttgcgttaggttgttgtcccacagcctgggcaacagcttgtagagctgcagctaacgcatc 22043978  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  22043979 atcgttccttccagcca 22043995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 32 - 228
Target Start/End: Complemental strand, 22125762 - 22125566
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    ||||||| ||||||| ||||||||||| ||||||| | ||||||| | ||| |||||||| ||| | |  ||| |||  || ||||| | |||||| |||    
T  22125762 cctctcagtctctttaagccacgtctgggctccataagggtcataacgtcctttgaaagttggagggttcttcttcatgaaagtctccaacatcctagct 22125663  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     ||||| | ||||||||||| || ||||||||||||||||||||||| || ||| ||| ||| |||||||| | |||||||||||||||||||||||    
T  22125662 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaacgcagcatcgtttcttccagcca 22125566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 228
Target Start/End: Complemental strand, 17670825 - 17670629
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| ||||| || ||| | |  ||| |||  || ||||| | |||||| |||    
T  17670825 cctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaggtcggagggttcttcttcatgaacgtctccaacatcctagct 17670726  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     | ||  | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | |||||||||||||||||||||||    
T  17670725 tccgcgttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcgtttcttccagcca 17670629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 18860535 - 18860751
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| |||   |  ||| | |  |    
T  18860535 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagttggacagttcttctttatga 18860634  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||||||||| || |||||||||||||||| |||||| || ||||||| ||| |||| ||| | ||||||    
T  18860635 acgtctccaacatcctagcttcagcattcgcaccagcatttgcgttaggttgttgtcccatagcttgggcaacagcttgtagagcagtagctaacgcagc 18860734  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  18860735 atcgtttcttccagcca 18860751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 22116998 - 22116782
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||| ||||||| ||||| ||||  ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  22116998 cactgcataacccggaaaatcctctcagtctctttaagccatgtctaggctccatcagggtcataacgtcctttgaaagttggagggttcttcttcatga 22116899  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| |  ||| |    
T  22116898 aagtctccaacatcctagcttcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaaagcaac 22116799  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  22116798 atcgtttcttccagcca 22116782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 22994660 - 22994860
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttg-----aaagtaggatgatgattcctcagaaaggtctctagcatcct 127  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||     ||||||||   |||||||||||  || || || | ||||||    
T  22994660 ctctcaatctctttgagccacgtctgagctccatcagggtcatatcttcctttgaaattaaagtaggcgaatgattcctcaagaaagtttccaacatcct 22994759  T
Q  128 cgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcc 227  Q
      || ||||| | | ||| || || |||||||| || || |||||| ||||||| ||| |||| | |||||||||||||||||| |||||||||||||||    
T  22994760 aacttcagcattagtacccgcgttagcattaggctgatgccccacaacttgagccacaacttccaatgcagcagcaatcgcagcgtcgtttcttccagcc 22994859  T
Q  228 a 228  Q
    |    
T  22994860 a 22994860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 20384308 - 20384242
Alignment:
Q  42 tctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||||||||||  ||||||||||||    
T  20384308 tctttgagccacgtctgagctccatcaggatcataccttcccttgaaagtaggtggatgattcctca 20384242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 21968935 - 21968838
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    |||||||||||| | ||| | ||||||| |||||||||||||| |||||||||||||| |||| || ||||||||||| || ||  ||||||||||||    
T  21968935 acactgcatcactctgaagatcctctcagtctctttgagccacttctgagctccatcagggtcgtaccttcccttgaatgttggtggatgattcctca 21968838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 19986110 - 19986302
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||| || || ||||| || ||  |||| || ||||||||||| ||  |||||||| |      
T  19986110 ctctcaacctctttgagccacttctgagctccatcagggtcatacctccctttgaatgttggtggatggtttctcagaaaggtttccggcatcctcacac 19986209  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    || || |   |||||||   ||||| |||||||||   ||||||||||||||| | || |||||||||||||  ||| |||| ||||| |||||||    
T  19986210 catcatt---accagcaccagcattcggttgttgttgtacagcttgagctacaacctcaagtgcagcagcaagagcatcatcatttctcccagcca 19986302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 21330529 - 21330626
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    |||||||||||| | ||| | ||||||||||||||| |||||| |||||||||||||| |||| || ||||| ||||| || ||  ||||||||||||    
T  21330529 acactgcatcactctgaagatcctctcaatctctttaagccacttctgagctccatcagggtcgtaccttccgttgaatgttggtggatgattcctca 21330626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 21981775 - 21981678
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    |||||||||||| | ||| | ||||||| | |||||||||||| |||||||||||||| |||| || ||||||||||| || ||  ||||||||||||    
T  21981775 acactgcatcactctgaagatcctctcagtttctttgagccacttctgagctccatcagggtcgtaccttcccttgaatgttggtggatgattcctca 21981678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 21986694 - 21986597
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    |||||||||||| | ||| | ||||||| | |||||||||||| |||||||||||||| |||| || ||||||||||| || ||  ||||||||||||    
T  21986694 acactgcatcactctgaagatcctctcagtttctttgagccacttctgagctccatcagggtcgtaccttcccttgaatgttggtggatgattcctca 21986597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 22003902 - 22003805
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    |||||||||||| | ||| | ||||||| | |||||||||||| |||||||||||||| |||| || ||||||||||| || ||  ||||||||||||    
T  22003902 acactgcatcactctgaagatcctctcagtttctttgagccacttctgagctccatcagggtcgtaccttcccttgaatgttggtggatgattcctca 22003805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 228
Target Start/End: Complemental strand, 22114205 - 22114015
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    |||||| ||||| || ||||||||||| ||||||||  ||||||||||||| |||||||| ||| ||||||||||||  || ||||| | |||||| |      
T  22114205 cctctctatctccttaagccacgtctgggctccatcggggtcatatcttcctttgaaagttggaggatgattcctcatgaaagtctccaacatcctagtc 22114106  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     | ||| |  |||||      |||||||| || ||||| | || ||| || ||||  ||||||||||||||||||||||| ||||| ||||||||||    
T  22114105 tcggcagtcacacca------gcattaggctgatgtccaatagattgtgccacagtctctagtgcagcagcaatcgcagcgtcgttccttccagcca 22114015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 22242163 - 22242266
Alignment:
Q  15 tgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaagg 114  Q
    ||||| || |||||||  || |||| ||||||||||||||| ||||||| |||| ||||||| ||||| ||||| |||||   ||||||||||||||| |    
T  22242163 tgcatgacccagaaaattctttcaacctctttgagccacgtttgagctcaatcagggtcataccttcctttgaacgtaggtgaatgattcctcagaaaag 22242262  T
Q  115 tctc 118  Q
    ||||    
T  22242263 tctc 22242266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 6606140 - 6606076
Alignment:
Q  164 ttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||| ||||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||    
T  6606140 ttgtcctacagcttgagctacagcctcaagcgcagcagcaatagcagcatcatttctcccagcca 6606076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 21929403 - 21929602
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| ||||||||  || ||||||||| |||||||||||||| | ||||| || || ||||| || ||  |||| ||||||||||||||||| | ||||    
T  21929403 gaaaatcctctcaacttccttgagccacttctgagctccatcaggatcatacctccctttgaatgttggtggatggttcctcagaaaggtctccaacatc 21929502  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||  || || || |   |||||||    |||| ||||| ||||| ||||||||||| || || || |||||| ||||||| ||| |||| ||||| ||||    
T  21929503 cttactccatcatt---accagcagcaacattcggttgatgtcctacagcttgagcaactgcctcaagtgcaacagcaatagcatcatcatttctaccag 21929599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 21981627 - 21981561
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||| | |||||| |||||||||| || |||||||||||||| |||||||| ||||| |||||||    
T  21981627 tgttgttctacagctcgagctacagcctcaagtgcagcagcaatagcagcatcatttctcccagcca 21981561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 21986546 - 21986480
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||| | |||||| |||||||||| || |||||||||||||| |||||||| ||||| |||||||    
T  21986546 tgttgttctacagctcgagctacagcctcaagtgcagcagcaatagcagcatcatttctcccagcca 21986480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 22003745 - 22003688
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||| |||||||||| || |||||||||||||| |||||||| ||||| |||||||    
T  22003745 acagctcgagctacagcctcaagtgcagcagcaatagcagcatcatttctcccagcca 22003688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 22026944 - 22026887
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||| || ||||||| | |||| |||||||||||||| |||||||    
T  22026944 acagcttgagctacagcctcaagtgcagtaacaatagcagcatcgtttctaccagcca 22026887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 22176938 - 22176895
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||||||||||||||| || |||||||||||||| ||||||||    
T  22176938 acagcttgagctacagcctcaagtgcagcagcaatagcagcatc 22176895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 22049444 - 22049513
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||| ||||||||||| | ||| || ||||||||||| || ||||||||| |||| |||||||    
T  22049444 ggttgctgtcctacagcttgagcaatagcctcaagtgcagcagcgatagcagcatcggttctaccagcca 22049513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 22374745 - 22374858
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcaga 110  Q
    |||||||||||| |  || || ||||||| ||| ||||||||| |||| ||||||||| ||||||| || || ||||| || ||  |||| || ||||||    
T  22374745 acactgcatcacccttaagactctctcaacctccttgagccacttctgggctccatcagggtcatacctccctttgaatgttggtggatggtttctcaga 22374844  T
Q  111 aaggtctctagcat 124  Q
    ||||| || |||||    
T  22374845 aaggtttccagcat 22374858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 22027039 - 22026983
Alignment:
Q  72 tcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctc 128  Q
    ||||| ||||||||||| || ||  |||||||||||| ||||||||| |||||||||    
T  22027039 tcataccttcccttgaatgttgggggatgattcctcaaaaaggtctccagcatcctc 22026983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 10 - 224
Target Start/End: Complemental strand, 16241229 - 16241015
Alignment:
Q  10 aacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcag 109  Q
    |||||||||||| || |||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  16241229 aacactgcatcatgcggaaaaccctctcaatctctttgagccacatctgggctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcag 16241130  T
Q  110 aaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgca 209  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||| |||||||||||| | ||||    
T  16241129 aaaggtctctagcatcctcgcttcagcacttgcaccagcatttgcatcaggctgttgtcccacagcttgagctacggcttgtagtgcagcagctaacgca 16241030  T
Q  210 gcatcgtttcttcca 224  Q
    || ||||||||||||    
T  16241029 gcgtcgtttcttcca 16241015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 15133 - 14938
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| || |||||||||||| ||     
T  15133 ctctcaatctccttgagccacgtctgagctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcagaaaagtttctagcatcctcactt 15034  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | ||||||||||| |||  ||| || ||||||||| ||||||||||| ||||||||||| |||||||| || |||| |||||||||||||    
T  15033 cagcattagcaccagcatttgcagcaggctgatgtcccacaacttgagctacaacttctagtgcaacagcaatcacaacatcatttcttccagcca 14938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 15144066 - 15143850
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | |||||| ||||||| ||| || ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| |    
T  15144066 cactgcatcacacggaaaactctctcaacctccttaagccacgtctgggctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcagga 15143967  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| ||||||||||   ||||| |  |||||||||| |||||||| ||||| |||||||||||| ||||||||| |||||||||| | | ||||||    
T  15143966 aggtctcaagcatcctcgactcagcattcacaccagcatttgcattaggctgttgccccacagcttgatctacagcttgtagtgcagcaactaacgcagc 15143867  T
Q  212 atcgtttcttccagcca 228  Q
     ||||||||||||||||    
T  15143866 gtcgtttcttccagcca 15143850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 30 - 228
Target Start/End: Original strand, 14163383 - 14163581
Alignment:
Q  30 accctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcg 129  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| || || |||||||||     
T  14163383 accctttcgatctctttgagccacgtctgagctccatcagggtcatatcttcccttgaaggtaggaggatgattcctcagaaaagtttccagcatcctca 14163482  T
Q  130 ctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    || ||||| | |||||  ||||||||||||||||||| |||||||||||||| |||||||  ||||||||||| |||||| | |||||||| |||||||    
T  14163483 cttcagcattagcacccacattcgcattaggttgttgccccacagcttgagcaacagcttgcagtgcagcagcgatcgcaacgtcgtttctcccagcca 14163581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 16247793 - 16247577
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| ||||||||||||||| ||||||||||| ||||||||  ||||||||||||| |||||||| ||| ||||||| ||||  |    
T  16247793 cactgcatcacacggaaaatcctctcaatctctttaagccacgtctgggctccatcggggtcatatcttcctttgaaagttggaggatgatttctcatga 16247694  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| || |||||||||| || ||||| ||||||||||||||||| || ||||||| ||| |||||||| | |||| |    
T  16247693 aggtctccaacatcctagtcccagcatttacaccagcatttgcgttagggtgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcaac 16247594  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  16247593 atcgttccttccagcca 16247577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 16220104 - 16220299
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||||||||| ||||| | ||||||| ||     
T  16220104 ctctcaatctcttcgagccacgtctgagctccatcagggtcatatcttcctttgaaggtaggaggatgattcctcagaaaagtctccaacatcctcactt 16220203  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | ||||| || || |||||||| || || |||||| ||||||  ||| |||| | ||||| |||||||||| | ||||||||||||||||    
T  16220204 cagcattagcacccgcgttagcattaggctgatgccccacatcttgagtcacaacttccaatgcagtagcaatcgcaacgtcgtttcttccagcca 16220299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 18223591 - 18223375
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| ||||| ||||||||| ||||||||||| ||||||||  ||||||||||||| | |||||| ||| ||||||| ||||  |    
T  18223591 cactgcatcacacggaaaatcctctaaatctcttttagccacgtctgggctccatcggggtcatatcttccttcgaaagttggaggatgatttctcatga 18223492  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| || |||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  18223491 aggtctccaacatcctggtctcagcatttacaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 18223392  T
Q  212 atcgtttcttccagcca 228  Q
    ||||||  |||||||||    
T  18223391 atcgttctttccagcca 18223375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 8390304 - 8390520
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  8390304 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 8390403  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  8390404 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 8390503  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  8390504 atcgttccttccagcca 8390520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 14300099 - 14299883
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  14300099 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagttggagggttcttcttcatga 14300000  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  14299999 aagtctccaacatcctagcttcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 14299900  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  14299899 atcgtttcttccagcca 14299883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 12480492 - 12480708
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  12480492 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 12480591  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| ||||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | |||| |    
T  12480592 acgtctccaacatcctagcttcagcatttgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcatc 12480691  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  12480692 atcgttccttccagcca 12480708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 14700368 - 14700564
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| | || ||||||||  |||||||||||| ||||||||| | ||||    
T  14700368 gaaaactctctcaatctctttgagccacgtctgagctccatcagggtcatatcttactttaaaagtaggtggatgattcctcaaaaaggtctccaacatc 14700467  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||  || |      | ||||||||    ||||||||||||| |||||| ||||||| ||| |||| | |||||||||||| ||||| |||||||||||||    
T  14700468 ctaacttc------tccaccagcaccaacattaggttgttgccccacaacttgagccacaacttccaatgcagcagcaatagcagcgtcgtttcttccag 14700561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 13514259 - 13514461
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||  ||||||||||||| |||||||| ||| ||||||||| ||  |||||||| | ||||    
T  13514259 gaaaatcctctcaatctctttaagccacgtctgggctccatcggggtcatatcttcctttgaaagttggaggatgattccccatgaaggtctccaacatc 13514358  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
     | |   || || |  | ||||||||||| |||||||| |||||||||||||| || ||||||| ||| |||||||| | |||||||||||| |||||||    
T  13514359 atggtctcaacattcactccagcattcgcgttaggttggtgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcgttccttccag 13514458  T
Q  226 cca 228  Q
    |||    
T  13514459 cca 13514461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 228
Target Start/End: Original strand, 13880028 - 13880220
Alignment:
Q  36 tcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacag 135  Q
    |||| ||| ||||||||| |||||||| ||||| | |||||||| || |||||||| ||  ||||||| |||| ||| ||||||| ||||||  || |||    
T  13880028 tcaacctccttgagccacttctgagctacatcaggatcatatctacctttgaaagttggtggatgatttctcaaaaaagtctctaacatcctaacttcag 13880127  T
Q  136 cacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    || |||||||||||    |||| | ||||||||| ||||||||||||||||| || |||||||||||||| |||||||| |||||||||||||    
T  13880128 catttgcaccagcaccaacattcgattgttgtcctacagcttgagctacagcctcaagtgcagcagcaatagcagcatcatttcttccagcca 13880220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 17091269 - 17091053
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  17091269 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 17091170  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||| | ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  17091169 acgtctccaacatcgtagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 17091070  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  17091069 atcattccttccagcca 17091053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 8709592 - 8709781
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||| ||||||||||||| ||||||||||| || | || || |||||||| ||||| ||  ||||||| |||||||| || || | ||||||| ||     
T  8709592 ctctcaacctctttgagccacttctgagctccaccaggatcgtaccttcccttaaaagttggtggatgatttctcagaaaagtttccaacatcctcactc 8709691  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    || || | |||||||||||||      |||||||||||||| ||||||| ||| |||| |||||||||||||| ||||||||||||||||||||||    
T  8709692 catcattcgcaccagcattcg------gttgttgtcccacaacttgagcaacaacttcaagtgcagcagcaatagcagcatcgtttcttccagcca 8709781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 32 - 226
Target Start/End: Complemental strand, 8049723 - 8049529
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  || ||||| | |||||| |||    
T  8049723 cctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatgaacgtctccaacatcctagct 8049624  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagc 226  Q
     ||||| | ||||| |||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||||| |||||||||||    
T  8049623 tcagcattcgcaccggcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcatttcttccagc 8049529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 23959639 - 23959855
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||||| || || ||||||||||| ||||||||| ||||||| | |||  ||||||| ||| | |  ||| |||  |    
T  23959639 cactgcataacccggaaaatcctctcaatttccttaagccacgtctgggctccatcagggtcataacgtcctctgaaagtcggagggttcttcttcatga 23959738  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| | ||  | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  23959739 acgtctccaacatcctagcttccgcgttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 23959838  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  23959839 atcgtttcttccagcca 23959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 228
Target Start/End: Complemental strand, 16349841 - 16349703
Alignment:
Q  90 gtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagctt 189  Q
    |||||| ||||||||||||  || ||||| ||||||||||   ||||| |  ||||| ||||||||||||||| ||| ||||||||||||||||| ||||    
T  16349841 gtaggaggatgattcctcatgaaagtctcgagcatcctcgtctcagcattcacaccaacattcgcattaggttattgccccacagcttgagctacggctt 16349742  T
Q  190 ctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     |||| ||||||| | |||||||||||||||||||||||    
T  16349741 gtagttcagcagctaacgcagcatcgtttcttccagcca 16349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 18603936 - 18603726
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||| | |||||||||||| || ||||||||||| ||||||||| ||||||||||||| |||||||| ||| ||||||| ||||  |    
T  18603936 cactgcatcacacggaatatcctctcaatctccttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttggaggatgatttctcatga 18603837  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  | |||      |||||||| || ||||| | | |||| |||| ||  |||||||||||||||||||||||    
T  18603836 aggtctccaacatcctagtctcagcagtcactcca------gcattaggctgatgtccaataacttgtgctatagtctctagtgcagcagcaatcgcagc 18603743  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  18603742 atcgtttcttccagcca 18603726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 16233112 - 16232896
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||| | | ||| |||||||| ||| | |  ||| |||  |    
T  16233112 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcacaacgtcctttgaaagtcggagggttcttcttcatga 16233013  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||| ||||||||||| || ||||||| ||| ||||| || | ||||||    
T  16233012 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgccccacagcttgggcaacagcttgtagagcagcggctaacgcagc 16232913  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || |||| |||||    
T  16232912 atcattccttctagcca 16232896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 17332225 - 17332285
Alignment:
Q  168 cccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  17332225 cccacagcttgagccatagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 17332285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 14684178 - 14684273
Alignment:
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||  ||||||||||||| ||||||||||||||||| ||||| || ||| ||||||| |||||||| | |||||||||||| ||||||||||    
T  14684178 cagcactaacaccagcattcgcgttaggttgttgtcccactgcttgggcaacaacttctagagcagcagctaacgcagcatcgttccttccagcca 14684273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 178
Target Start/End: Original strand, 40476932 - 40477098
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||||| || || ||||||||||| ||||||||| ||||||| | ||| |||||| | ||| | |  ||| |||  |    
T  40476932 cactgcataacccggaaaatcctctcaatttccttaagccacgtctgggctccatcagggtcataacgtcctttgaaaatcggagggttcttcttcatga 40477031  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttg 178  Q
    | ||||| | |||||| ||| ||||| | ||||||||||| || |||||||||||||||||||||||    
T  40477032 aagtctccaacatcctagcttcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttg 40477098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 27904435 - 27904492
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  27904435 acagcttgagctacagcctcaagtgcagcagcaatagcagcatcgtttctaccagcca 27904492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 14992746 - 14992547
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| ||| ||||||||| |||||||||| ||| ||||||| || || || ||||| ||  |||| || |||||||| ||||| | |||     
T  14992746 gaaaatcctctcaacctccttgagccacttctgagctccgtcagggtcatacctccctttaaaagttggtggatggtttctcagaaaagtctccaacatg 14992647  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||| |  || |  |   ||||||| | ||||| ||||| || || ||||||||||| ||||| || |||||||||||||| ||||| |||||||| ||||    
T  14992646 ctcacaccatcgtt---accagcagtagcattcggttgctgccctacagcttgagcaacagcctcaagtgcagcagcaatagcagcgtcgtttctaccag 14992550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 3261174 - 3261056
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | ||| | ||| |||||||| || |||||| ||||||| || ||| | ||||| || ||||||||||| ||  ||||||||||||    
T  3261174 gaacactgcatgaccctgaatatcctttcaatctccttcagccacttctgagcaccgtcaggatcatacctacccttgaaagttggtggatgattcctca 3261075  T
Q  109 gaaaggtctctagcatcct 127  Q
    | || ||||||||||||||    
T  3261074 ggaaagtctctagcatcct 3261056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 51603019 - 51602962
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||| || |||||||||||||| ||||| |||||||| |||||||    
T  51603019 acagcttgagctacagcctcaagtgcagcagcaatagcagcgtcgtttctaccagcca 51602962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 53749697 - 53749640
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||| || |||||||||||||| ||||||||||| || |||||||    
T  53749697 acagcttgagctacagcctcaagtgcagcagcaatagcagcatcgttcctaccagcca 53749640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 29449890 - 29449799
Alignment:
Q  36 tcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcct 127  Q
    |||||||| || |||||  ||||||| |||||| | ||||| || ||||||||||| ||  ||||||||||||| || ||||||||||||||    
T  29449890 tcaatctccttcagccatttctgagcaccatcaggatcatacctacccttgaaagttggtggatgattcctcaggaaagtctctagcatcct 29449799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 44658246 - 44658128
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | ||| | ||| |||||||| || |||||| ||||||| || ||| | ||||| || ||||||||||| ||  ||||||||||||    
T  44658246 gaacactgcatgaccctgaatatcctttcaatctccttcagccacttctgagcaccgtcaggatcatacctacccttgaaagttggtggatgattcctca 44658147  T
Q  109 gaaaggtctctagcatcct 127  Q
      || ||||||||||||||    
T  44658146 agaaagtctctagcatcct 44658128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 16151675 - 16151730
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||| ||||| ||||||||||| ||||| | ||||||||||||||| ||||||||    
T  16151675 ggttgctgtcctacagcttgagcaacagcctttagtgcagcagcaatagcagcatc 16151730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 16155821 - 16155876
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||| ||||| ||||||||||| ||||| | ||||||||||||||| ||||||||    
T  16155821 ggttgctgtcctacagcttgagcaacagcctttagtgcagcagcaatagcagcatc 16155876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 15074253 - 15074370
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcaga 110  Q
    ||||| |||||| | ||| || ||||||| ||| ||||||||| |||| ||||||||| ||||||| || || ||||  || ||  |||| || ||||||    
T  15074253 acactacatcaccctgaagactctctcaacctccttgagccacttctgggctccatcagggtcatacctccctttgattgttggtggatggtttctcaga 15074352  T
Q  111 aaggtctctagcatcctc 128  Q
    ||||| || |||||||||    
T  15074353 aaggtttccagcatcctc 15074370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 16230117 - 16230044
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagc 226  Q
    ||||| ||||| ||||| ||||||||||| ||||  || |||||||| ||||| |||||||| ||||| |||||    
T  16230117 gcattcggttgctgtcctacagcttgagcaacagtctcaagtgcagctgcaatagcagcatcatttctaccagc 16230044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 18260476 - 18260544
Alignment:
Q  160 gttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||| ||||| ||||||||||| ||||| |  ||||||||| |||| || ||||||||||| |||||||    
T  18260476 gttgctgtcctacagcttgagcaacagcataaagtgcagcaacaatagcggcatcgtttctaccagcca 18260544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 18270439 - 18270507
Alignment:
Q  160 gttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||| ||||| ||||||||||| ||||| |  ||||||||| |||| || ||||||||||| |||||||    
T  18270439 gttgctgtcctacagcttgagcaacagcataaagtgcagcaacaatagcggcatcgtttctaccagcca 18270507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 153; Significance: 3e-81; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 18404462 - 18404242
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||| ||| || | ||| || |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||| |||||||||||    
T  18404462 tgaacactacattacacggaacactctctcaatctctttgagccacgtctgggctccattagggtcatatcttcccttgaaagtaggaggatgattcctc 18404363  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    | |||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||||||||||||    
T  18404362 ataaaggtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctgatgtccaacagcttgagctacaacttctagtgcagcagcaatcg 18404263  T
Q  208 cagcatcgtttcttccagcca 228  Q
    || ||||||||||||||||||    
T  18404262 caacatcgtttcttccagcca 18404242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 12 - 224
Target Start/End: Original strand, 23082182 - 23082394
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||| || |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||    
T  23082182 cactgcatcacacggaacactctctcaatctctttaagccacgtctgagctccatcagggtcatatcttcctttgaaagtaggaggatgattcctcagaa 23082281  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | ||||||| || ||| | | |||||| |||| |||||||| || || |||||| ||||||| |||||||| ||||||||||||||||||||    
T  23082282 aggtctccaacatcctcacttcagaattagcaccaacatttgcattaggctgatgccccacaacttgagccacagcttccagtgcagcagcaatcgcagc 23082381  T
Q  212 atcgtttcttcca 224  Q
     | ||||||||||    
T  23082382 gttgtttcttcca 23082394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 32 - 228
Target Start/End: Complemental strand, 5835733 - 5835537
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    |||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||| ||| ||||||||||||  || ||||| | ||||||||      
T  5835733 cctctcaatctccttgagccaagtctgagctccatcggggtcatatcttcccttgaaagttggaggatgattcctcatgaaagtctccaacatcctcgtc 5835634  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     ||||  |  ||||||||||||| ||||||||||||||||||||||| || ||||||| ||  |||||||| | |||||||||||| ||||||||||    
T  5835633 tcagcgttcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacagcttgtaaagcagcagctaacgcagcatcgttccttccagcca 5835537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 21765571 - 21765787
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||| ||||| || ||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||  |    
T  21765571 cactgcataacacggaaaatcctctcgatctccttaagccacgtctgggctccatcggggtcatatcttcccttgaaagtaggaggatgattcctcatga 21765670  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| |||||||| |   || || |  ||||||||||||||||||||||||| | || |||||||||||| |||| |||||||||||| | |||| |    
T  21765671 aggtctcaagcatcctagactcaacattcacaccagcattcgcattaggttgttgcctcatagcttgagctacggcttgtagtgcagcagctaacgcaac 21765770  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| |||| |||||    
T  21765771 atcgttacttctagcca 21765787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 19667226 - 19667409
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||  | ||||||||| || ||     
T  19667226 ctctcaatctccttgaggcacgtctgagctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcagaaaattttctagcatcgtcactt 19667325  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| || || |            ||| || |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  19667326 cagcatttacagc------------aggctgatgtcccacagcttgagctacagcttctaatgcagcagcaatcgcagcgtcgtttcttccagcca 19667409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 70 - 228
Target Start/End: Original strand, 19872005 - 19872163
Alignment:
Q  70 ggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcc 169  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||| ||||||||||   || || | |||||| |||| |||||||| ||||| ||    
T  19872005 ggtcatatcttcccttgaaagtaggaggatgattcctcaagaaggtctcaagcatcctcgactcaacattcgcaccaacatttgcattaggctgttgccc 19872104  T
Q  170 cacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||| | || |||||||||||| | |||||| ||||||||||||||||    
T  19872105 cacagcttgagctacggtttgtagtgcagcagctaacgcagcgtcgtttcttccagcca 19872163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 16575646 - 16575862
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | |||  ||||||| ||| | |  ||| |||  |    
T  16575646 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctctgaaagtcggagggttcttcttcatga 16575745  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||| | ||| |||||||| | ||||||    
T  16575746 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcctgtagagcagcagctaacgcagc 16575845  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  16575846 atcgtttcttccagcca 16575862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 16619734 - 16619518
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | |||  ||||||| ||| | |  ||| |||  |    
T  16619734 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctctgaaagtcggagggttcttcttcatga 16619635  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||| | ||| |||||||| | ||||||    
T  16619634 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcctgtagagcagcagctaacgcagc 16619535  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  16619534 atcgtttcttccagcca 16619518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 28259722 - 28259506
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||| |||||||| ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  28259722 cactgcataacccggaaaatcctctctatctctttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 28259623  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  28259622 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 28259523  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  28259522 atcgttccttccagcca 28259506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 28286194 - 28286410
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||| |||||||| ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  28286194 cactgcataacccggaaaatcctctctatctctttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 28286293  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  28286294 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 28286393  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  28286394 atcgttccttccagcca 28286410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 28313386 - 28313602
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||| |||||||| ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  28313386 cactgcataacccggaaaatcctctctatctctttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 28313485  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  28313486 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 28313585  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  28313586 atcgttccttccagcca 28313602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 28338471 - 28338255
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||| |||||||| ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  28338471 cactgcataacccggaaaatcctctctatctctttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 28338372  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  28338371 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 28338272  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  28338271 atcgttccttccagcca 28338255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 29588964 - 29588748
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||||| ||| |||||||| ||| | |  ||| |||  |    
T  29588964 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcatatcgtcctttgaaagtcggagggttcttcttcatga 29588865  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || |||||||  || |||||||| | ||||||    
T  29588864 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgaagagcagcagctaacgcagc 29588765  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  29588764 atcattccttccagcca 29588748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 2871327 - 2871111
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  2871327 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 2871228  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||  | ||||||||||| |||||||||||||||||||||||||| || ||| ||| ||| |||||||| | ||||||    
T  2871227 acgtctccaacatcctagcttcagcgttcgcaccagcatttgcattaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaacgcagc 2871128  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||| ||||    
T  2871127 atcgtttcttccggcca 2871111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 24292306 - 24292090
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  24292306 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 24292207  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| | ||  | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  24292206 acgtctccaacatcctagcttccgcgttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 24292107  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  24292106 atcgtttcttccagcca 24292090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 27206378 - 27206594
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| |||||||||||||| ||||||||| |||||||   ||| |||||||  ||| | |  ||| |||  |    
T  27206378 cactgcataacccggaaaatcctctcaatctccttgagccacgtctgggctccatcagggtcataatgtcctttgaaagctggagggttcttcttcatga 27206477  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||  ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  27206478 acgtctccaacatcctagcctcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 27206577  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  27206578 atcgttccttccagcca 27206594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 27242850 - 27242634
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| |||||||||||||| ||||||||| |||||||   ||| |||||||  ||| | |  ||| |||  |    
T  27242850 cactgcataacccggaaaatcctctcaatctccttgagccacgtctgggctccatcagggtcataatgtcctttgaaagctggagggttcttcttcatga 27242751  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||  ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  27242750 acgtctccaacatcctagcctcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 27242651  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  27242650 atcgttccttccagcca 27242634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 25756132 - 25755955
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| |||||||||||||||||||||| |||| ||||||||  ||||||||||||| |||||  | ||| ||||||||||||  |    
T  25756132 cactgcatcacacggaaaatcctctcaatctctttgagccacatctgggctccatcggggtcatatcttcctttgaagtttggaggatgattcctcatga 25756033  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagctt 189  Q
    ||||||||| ||| ||||   ||||| |  ||||| |||||   ||||||||||||||||||||||| || |||||||    
T  25756032 aggtctctaacattctcgtctcagcattcacaccatcattcatgttaggttgttgtcccacagcttgggcaacagctt 25755955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 39 - 225
Target Start/End: Original strand, 22437655 - 22437835
Alignment:
Q  39 atctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcac 138  Q
    ||||| || ||||||||  | ||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||   |||||     
T  22437655 atctccttaagccacgttcgggctccatcggggtcatatcttcccttgaaagtaggaggatgattcctcataaaggtctcaagcatcctcgactcagcat 22437754  T
Q  139 ttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    | ||||||      |||||||| |||||||  ||| |||||||||| |||| || || |||||| | ||||||||||||||||||||    
T  22437755 tcgcacca------gcattaggctgttgtcaaacaacttgagctacggcttatattgtagcagctagcgcagcatcgtttcttccag 22437835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 228
Target Start/End: Complemental strand, 25958246 - 25958059
Alignment:
Q  41 ctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcactt 140  Q
    ||||||||||||||  |||||||||||  | ||||| ||||| |||||| ||||  |||||||||||| ||| || || | ||||||| || ||||| |     
T  25958246 ctctttgagccacgattgagctccatctggatcataccttcctttgaaaataggcggatgattcctcataaaagtttccaacatcctcacttcagcatta 25958147  T
Q  141 gcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     |||||||| | |||||||| |||||||||| ||||||||| |||  ||| | |||||||||||| ||| ||||||||||||||||||    
T  25958146 acaccagcactagcattaggctgttgtcccatagcttgagccacatattccaatgcagcagcaatagcaacatcgtttcttccagcca 25958059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 23084333 - 23084131
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||| | |||||||||||||||||||||||||||  | ||||| ||||| |||||||||||  ||| |||||||||||| ||||| | |||     
T  23084333 gaaaatcctctctacctctttgagccacgtctgagctccatctggatcataccttcctttgaaagtaggtggattattcctcagaaaagtctccaacatt 23084234  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||  |  ||||| | ||||||||||  |||||||| ||||| |||||||||||||| ||| |||| |   |||||||||| || || || ||||||||||    
T  23084233 ctaacatcagcattagcaccagcatcagcattaggctgttgccccacagcttgagccacaacttccaacccagcagcaatagcggcgtcatttcttccag 23084134  T
Q  226 cca 228  Q
    |||    
T  23084133 cca 23084131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 25116330 - 25116532
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||| ||||||| | ||| | || ||| ||| | |  ||| |||  |  ||||| | ||||    
T  25116330 gaaaatcctctcaatctctttaagccacgtctgggctccatcacggtcataacgtccttagagagttggacggttcttcttcatgatagtctccaacatc 25116429  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    || ||  ||||| | ||||||||||| || |||||||||||||||||||||||  | ||||||| ||| |||||||| | |||| |||||||||||||||    
T  25116430 ctagcatcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttggacaacagcttgtagagcagcagctaacgcatcatcgtttcttccag 25116529  T
Q  226 cca 228  Q
    |||    
T  25116530 cca 25116532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 224
Target Start/End: Original strand, 18660695 - 18660878
Alignment:
Q  41 ctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcactt 140  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||  ||||||| |||||||  || || | ||| ||  |  || ||||     
T  18660695 ctctttgagccacgactgagctccatcagggtcataccttcccttgaaagtaggtggatgatttctcagaagagtttccaacattctaacctcaccacta 18660794  T
Q  141 gcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttcca 224  Q
    |||||||||    ||||||| ||||| |||||||||||||| ||| |||| | |||||||||||| ||||| ||  ||||||||    
T  18660795 gcaccagcaccaacattaggctgttgccccacagcttgagccacaacttccaatgcagcagcaatagcagcgtcaattcttcca 18660878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 25607601 - 25607538
Alignment:
Q  165 tgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25607601 tgtccaacagcttgggctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 25607538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 42 - 228
Target Start/End: Complemental strand, 30675459 - 30675279
Alignment:
Q  42 tctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttg 141  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||||||||||  |||||||||||||||| || |||| ||||||  || |   | |      
T  30675459 tctttgagccacgtctgagctccatcaggatcataccttcccttgaaagtaggtggatgattcctcagaaaagtttctaacatcctaacttcgttattac 30675360  T
Q  142 caccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||      |||||||||||||| || ||||||||||| ||| |||| | |||||||||||| |||||||| || |||| |||||    
T  30675359 cacca------gcattaggttgttgccctacagcttgagccacaacttccaatgcagcagcaatagcagcatcattccttctagcca 30675279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 228
Target Start/End: Original strand, 18326646 - 18326832
Alignment:
Q  42 tctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttg 141  Q
    ||||||||||||||||||||||||||| | ||||  ||||||||||||| |||  || ||||||||||||| || || | ||||||  || |  || | |    
T  18326646 tctttgagccacgtctgagctccatcaggatcatgccttcccttgaaagcaggtggacgattcctcagaaaagtttccaacatcctaactccgtcattag 18326745  T
Q  142 caccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    | ||||||   |||||||| ||||| |||||||||||||||||| |||| | ||||||||||||  || |||| || ||||||||||    
T  18326746 cgccagcaccagcattaggctgttgccccacagcttgagctacaacttccaatgcagcagcaataacaacatcattccttccagcca 18326832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 25771617 - 25771819
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| ||||||||||||| |||  ||||||||| | | |||||| || |||||||| ||   |||||| |||| |||  | || | || |    
T  25771617 gaaaatcctctcaacctctttgagccacttctatgctccatcaggattatatctacctttgaaagttggtgcatgatttctcaaaaaaatttccaacaac 25771716  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||| ||||  || |||||||||||   ||||| ||||| ||||| |||||||||||||||||||  |||||||||||||| ||| |||| ||||| ||||    
T  25771717 ctcactacgtcatttgcaccagcaccagcattcggttgctgtcctacagcttgagctacagcttgcagtgcagcagcaatagcaacatcatttctcccag 25771816  T
Q  226 cca 228  Q
    |||    
T  25771817 cca 25771819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 18178837 - 18178751
Alignment:
Q  142 caccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| |||| |||||||| ||||| |||||||||||||| ||| |||  | |||||||||||||||||| ||||||||||||||||    
T  18178837 caccaacattagcattaggctgttgccccacagcttgagccacaactttcaatgcagcagcaatcgcagcgtcgtttcttccagcca 18178751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 21475306 - 21475514
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| ||||||||||||| |||| ||||||||| | | |||||| || |||||||| ||  ||||||| |||||||| || || | || |    
T  21475306 gaaaatcctctcaacctctttgagccacttctgtgctccatcaggattatatctacctttgaaagttggtggatgatttctcagaaaagtttccaacaac 21475405  T
Q  126 ctcgctacagcacttgcaccagcattcg------cattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttc 219  Q
    ||| || |  || ||||||||||||  |      |||| ||||||||||| ||||||| ||| |||||||  | |||||||||||| |||||||| ||||    
T  21475406 ctcactccgtcaattgcaccagcatcagcaccaacatttggttgttgtcctacagcttcagcaacagcttgcaatgcagcagcaatggcagcatcatttc 21475505  T
Q  220 ttccagcca 228  Q
    | |||||||    
T  21475506 tcccagcca 21475514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 27558338 - 27558247
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgatt 103  Q
    |||| |||||| | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||||||||| ||||| || ||| |||||||    
T  27558338 cactacatcacacggaaaatcctctcaatctccttaagccacgtctgggctccatcaaggtcatatcttcctttgaaggttggaggatgatt 27558247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 27554687 - 27554601
Alignment:
Q  142 caccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||| ||||| ||||||||||||||||||||||| || ||| ||| ||| |||||||| | |||| ||||||||| ||||||||    
T  27554687 caccagcgttcgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaacgcaacatcgtttcctccagcca 27554601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 18181895 - 18181839
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcc 82  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| || |||||    
T  18181895 gaaaaccctctcaatctctttgagccacgtctgagcttcatcagggtcgtaccttcc 18181839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 8720080 - 8720014
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| ||||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||    
T  8720080 tgttgtcctacagcttgagctacagcctcaagcgcagcagcaatagcagcatcatttctcccagcca 8720014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 15463232 - 15463291
Alignment:
Q  158 aggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    |||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  15463232 aggttgctgtcctacagcttgagccacagcctcaagtgcagcagcaatagcagcatcgtt 15463291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 16828615 - 16828679
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||||||||||||  || | ||||||||||| |||||||| ||||| |||||||    
T  16828615 tgttgtcccacagcttgagctacagc--ctcgcgcagcagcaatagcagcatcatttctcccagcca 16828679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 19438902 - 19438960
Alignment:
Q  156 ttaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||||||||||   ||||||||||||||||| || ||| |||||||||| ||||||||    
T  19438902 ttaggttgttgtagtacagcttgagctacagcctcaagtacagcagcaatagcagcatc 19438960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 20009885 - 20009827
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    ||||| ||||| ||||||||||| ||||| || ||||||||||| || |||||||||||    
T  20009885 ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcgatagcagcatcgtt 20009827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 19868379 - 19868423
Alignment:
Q  14 ctgcatcacgcagaaaaccctctcaatctctttgagccacgtctg 58  Q
    ||||||||| | |||||| |||||||||||||| |||||||||||    
T  19868379 ctgcatcacacggaaaactctctcaatctctttaagccacgtctg 19868423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 149; Significance: 7e-79; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 12183 - 12403
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||| || | ||| || |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||||||    
T  12183 tgaacactgcattacacggaacactctctcaatctctttgagccacgtctgggctccatcaggatcatatcttcccttgaaagtaggaggatgattcctc 12282  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||||||| | ||    
T  12283 agaaaggtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctattgtcccacagcttgagctacggcttgtagtgcagcagctaacg 12382  T
Q  208 cagcatcgtttcttccagcca 228  Q
    || | ||||||||||||||||    
T  12383 caacgtcgtttcttccagcca 12403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 15005 - 15224
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | ||| || ||||||||| |||| |||||| |||| ||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  15005 gaacactgcattacacggaacactctctcaatcactttaagccacatctgggctccatcagggtcatatcttcccttgaaagtaggaggatggttcctca 15104  T
Q  109 gaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgc 208  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||| |||||||||||| | |||    
T  15105 gaaaggtctctagcatcctcgcttcagcacttgcaccagaattcgcattaggttgttgtcccacagcttgacctacggcttgtagtgcagcagctaacgc 15204  T
Q  209 agcatcgtttcttccagcca 228  Q
    ||| ||||||||||||||||    
T  15205 agcgtcgtttcttccagcca 15224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 7e-79; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 25430243 - 25430463
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||| || | ||| || |||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  25430243 tgaacactgcattacacggaacactctctcaatctctttgagccacgtctgggctccatcagggtaatatcttcccttgaaagtaggaggatgattcctc 25430342  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||    
T  25430343 agaaaggtccctagcatcctcgcttcagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttgtagtgcagcagctaacg 25430442  T
Q  208 cagcatcgtttcttccagcca 228  Q
    |||  |||| ||||| |||||    
T  25430443 cagtgtcgtctcttctagcca 25430463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 33 - 224
Target Start/End: Complemental strand, 26734032 - 26733841
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| | |||||||||| ||| ||||| | ||||||| ||     
T  26734032 ctctcaatctctttgagccacgtctgagctccatcagggtcatatcttcctttaaaagtaggaggttgattcctcataaaagtctccaacatcctcactt 26733933  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttcca 224  Q
    ||||| ||||||||||||| |||||||| || ||||| ||||||||||| | | ||||||||||||||||||||||||| ||||||||||||    
T  26733932 cagcatttgcaccagcattagcattaggctgatgtcctacagcttgagccaaaacttctagtgcagcagcaatcgcagcgtcgtttcttcca 26733841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 21331548 - 21331332
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||| ||||||||    
T  21331548 cactgcataacccggaacactctctcaatctctttgagccacgtctgagctccatcagggtcatatcttcctttgaaggtaggaggatgatacctcagaa 21331449  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | ||||||| || ||||| | || || ||||| |||||||| || || |||||||||||||| |||||||| | |||||||||| |||||||    
T  21331448 aagtctccaacatcctcacttcagcattagctcccgcattagcattaggctgatgccccacagcttgagccacagcttccaatgcagcagcagtcgcagc 21331349  T
Q  212 atcgtttcttccagcca 228  Q
     ||||||||||||||||    
T  21331348 gtcgtttcttccagcca 21331332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 23536774 - 23536558
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||| |||||| ||||||| |||||||||||| || ||||||||||| ||||||||| ||||||||||||| |||||||| ||| ||||||||||||  |    
T  23536774 cactacatcacacagaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttggaggatgattcctcatga 23536675  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  ||||||||||||| ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  23536674 aggtctccaacatcctggtctcagcattcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 23536575  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  23536574 atcgttccttccagcca 23536558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 225
Target Start/End: Original strand, 21883604 - 21883817
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||||||   |||||| |||||||| || || ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||  |    
T  21883604 cactgcatcacaaggaaaactctctcaatatccttaagccacgtctgggctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcatga 21883703  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    |||| || ||||||||||   ||||| | ||||||||||| |||||||| ||||| ||||||||||| ||||| || | |||||||||||| | |||| |    
T  21883704 aggtttccagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgccccacagcttgtgctacggcctgtagtgcagcagctaacgcaac 21883803  T
Q  212 atcgtttcttccag 225  Q
    ||||||||||||||    
T  21883804 atcgtttcttccag 21883817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 18782941 - 18783157
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| ||||||||||||||| ||||||||||| ||||||||  ||||||||||||| |||||||| ||||||||||| ||||  |    
T  18782941 cactgcatcacacggaaaatcctctcaatctctttaagccacgtctgggctccatcggggtcatatcttcctttgaaagttggatgatgatttctcacga 18783040  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||  |  |||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  18783041 aggtctccaacatcctagtctcagcgttcacaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 18783140  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  18783141 atcgttccttccagcca 18783157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 23475042 - 23475237
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||  |||||||||||| ||||||||| | ||||||  ||     
T  23475042 ctctcaatctctttgagccacgtctgagctccatcagggtcataccttcctttcaaagtaggcggatgattcctcaaaaaggtctccaacatcctaactt 23475141  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | ||||| || || |||||||| |||||  ||||||||||||| ||| |||| |  ||||||||||||||||| ||||||||||||||||    
T  23475142 cagcattagcacccgcgttagcattaggctgttgctccacagcttgagccacatcttccaacgcagcagcaatcgcagcgtcgtttcttccagcca 23475237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 20804438 - 20804640
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||| ||||| || |||||||| || ||||||||| |||||||||| ||||||||| ||||| ||||||||||||  ||||||||  |||||    
T  20804438 gaaaatcctctcgatctccttaagccacgtatgggctccatcagggtcatatctacccttgaaaataggaggatgattcctcatgaaggtctcgtgcatc 20804537  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||||   ||||| |  | ||||||||||||||||| |||||||||| || |||||||||||||| || ||||||||| | ||||||||||||||||||||    
T  20804538 ctcgtctcagcattcactccagcattcgcattaggctgttgtcccataggttgagctacagcttgtactgcagcagctaacgcagcatcgtttcttccag 20804637  T
Q  226 cca 228  Q
    |||    
T  20804638 cca 20804640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 22351743 - 22351959
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||| ||| ||||||||  || | |  ||| |||  |    
T  22351743 cactgcataacccggaaaatcctctcaatctctttaagccacgtctgggctccatcagggtcatatcgtcctttgaaagttagagggttcttcttcatga 22351842  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| |   ||||| | ||||||||||| || ||||||||||||||||||||||| || ||||||| |||||||||||| | ||||||    
T  22351843 aagtctccaacatcctagtctcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagtgcagcagctaacgcagc 22351942  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  22351943 atcgtttcttccagcca 22351959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 16360326 - 16360542
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  16360326 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 16360425  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  16360426 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 16360525  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  16360526 atcattccttccagcca 16360542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 19773784 - 19774000
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  19773784 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 19773883  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||| |||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  19773884 acgtctccaacatcctagcttcagcattcgcaccggcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 19773983  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  19773984 atcgtttcttccagcca 19774000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 22329449 - 22329233
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  22329449 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagttggagggttcttcttcatga 22329350  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||||||||| |  ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  22329349 aagtctccaacatcctagcttcagcattcgcaccagcatttgtgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 22329250  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  22329249 atcgtttcttccagcca 22329233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 27522230 - 27522446
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  27522230 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 27522329  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  27522330 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 27522429  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  27522430 atcattccttccagcca 27522446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 24 - 228
Target Start/End: Complemental strand, 27665053 - 27664849
Alignment:
Q  24 cagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagca 123  Q
    ||||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  || ||||| | ||    
T  27665053 cagaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatgaacgtctccaaca 27664954  T
Q  124 tcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttcc 223  Q
    |||| ||| ||||| | ||||| |||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||||||||||||||    
T  27664953 tcctagcttcagcattcgcaccggcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcgtttcttcc 27664854  T
Q  224 agcca 228  Q
    |||||    
T  27664853 agcca 27664849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 34570318 - 34570534
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  34570318 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 34570417  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  34570418 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 34570517  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  34570518 atcattccttccagcca 34570534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 22138492 - 22138708
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | |||||  ||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  22138492 cactgcataacccggaaaattctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagttggagggttcttcttcatga 22138591  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||||||||| || ||||||||||||||||||||||| || ||| ||| ||| |||||||| | ||||||    
T  22138592 acgtctccaacatcctagcttcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaacgcagc 22138691  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  22138692 atcgtttcttccagcca 22138708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 27614180 - 27614396
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  27614180 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 27614279  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  27614280 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 27614379  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  27614380 atcattccttccagcca 27614396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 27681962 - 27681746
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  27681962 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 27681863  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||||||||| || ||||||||||||||||||||||| || ||| ||| ||| |||||||| | |||| |    
T  27681862 aagtctccaacatcctggcttcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaacgcaac 27681763  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  27681762 atcgtttcttccagcca 27681746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 21560566 - 21560371
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||| ||||||||||||| | |||||||||||| | || || ||||| |||||||| ||  ||||||| |||| ||| || || | |||||| |||     
T  21560566 ctctcaacctctttgagccacctttgagctccatcaggatcgtaccttcctttgaaagttggtggatgatttctcaaaaaagtttccaacatcctggctc 21560467  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    || || || ||||||||   ||||| || |||||||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  21560466 catcatttacaccagcaccagcattcggctgttgtcccacaacttgagctacagcttcaagtgcagcagcaatagcaacatcgtttcttccagcca 21560371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 228
Target Start/End: Complemental strand, 29472620 - 29472419
Alignment:
Q  27 aaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcc 126  Q
    |||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  || ||||| | |||||    
T  29472620 aaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagttggagggttcttcttcatgaaagtctccaacatcc 29472521  T
Q  127 tcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagc 226  Q
    | ||| ||||| | ||||||||||| || ||||||||||||||||||||||  || ||||||| ||  |||||||| | |||||||||||||||||||||    
T  29472520 tagcttcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttaggcaacagcttgtaaagcagcagctaacgcagcatcgtttcttccagc 29472421  T
Q  227 ca 228  Q
    ||    
T  29472420 ca 29472419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 41774667 - 41774883
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| |  ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  41774667 cactgcataacccggaaaatcctctcaatctcctgaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 41774766  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| | ||  | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  41774767 acgtctccaacatcctagctcccgcgttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 41774866  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  41774867 atcgtttcttccagcca 41774883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 228
Target Start/End: Original strand, 23670474 - 23670657
Alignment:
Q  45 ttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcac 144  Q
    ||||||||| ||||||| |||||| |||||||||| ||||||| ||| ||  ||||||| |||||||| || |||| ||||||  |  | ||| ||||||    
T  23670474 ttgagccacttctgagccccatcagggtcatatctacccttgagagttggtggatgatttctcagaaaagtttctaacatcctaacctcggcatttgcac 23670573  T
Q  145 cagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||    |||| |||||||| || ||||||||||||||||| || |||||||||||||| |||||||| |||||||||||||    
T  23670574 cagcaccaacatttggttgttgccctacagcttgagctacagcctcaagtgcagcagcaatagcagcatcatttcttccagcca 23670657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 37288058 - 37287842
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  37288058 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 37287959  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||  | ||||||||||| || ||||||||||||||||||  ||| || ||| ||| ||| |||||||| | ||||||    
T  37287958 acgtctccaacatcctagcttcagcgttcgcaccagcatttgcgttaggttgttgtcccacaatttgggcaacaacttgtagagcagcagctaacgcagc 37287859  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  37287858 atcgtttcttccagcca 37287842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 40712604 - 40712820
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||| | ||| | |  ||| |||  |    
T  40712604 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaaatcggagggttcttcttcatga 40712703  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | |||| |||||||||||||||||| || |||||||  || |||||||| | ||||||    
T  40712704 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttagattgttgtcccacagcttgggcaacagcttgaagagcagcagctaacgcagc 40712803  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  40712804 atcattccttccagcca 40712820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 23461745 - 23461941
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||| ||||| || ||||||| ||| ||||||||| |||| |||||||| ||||||   ||| ||||||||||||  |||||||| ||||||    
T  23461745 gaaaatcctctcgatctccttaagccacgcctgggctccatcagggtcgtatcttcctttgaaaaccggaggatgattcctcatgaaggtctcaagcatc 23461844  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||||   ||||| |  | ||||||||      ||| || ||||| | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  23461845 ctcgtctcagcattcactccagcatt------aggctgatgtccaatagcttgtgctacagtttctagtgcagcagcaatcgcagcatcgtttcttccag 23461938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 45 - 228
Target Start/End: Original strand, 43123309 - 43123492
Alignment:
Q  45 ttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcac 144  Q
    ||||||||| |||||||||||||| | |||||||| || |||||||| ||  ||||||| |||||||| || |||| |||||   |  | ||| |||||     
T  43123309 ttgagccacttctgagctccatcaggatcatatctacctttgaaagttggtggatgatttctcagaaaagtttctaacatccgaacctcggcatttgcat 43123408  T
Q  145 cagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||    |||| |||||||| || ||||||||||||||||| || |||||||||| ||| |||||||| |||||||||||||    
T  43123409 cagcaccaacatttggttgttgccctacagcttgagctacagcctcaagtgcagcagtaatagcagcatcatttcttccagcca 43123492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 178
Target Start/End: Complemental strand, 14996301 - 14996135
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  14996301 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagttggagggttcttcttcatga 14996202  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttg 178  Q
    | ||||| | |||||| ||| ||||| | ||||||||||| || |||||||||||||||||||||||    
T  14996201 aagtctccaacatcctagcttcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttg 14996135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 23562590 - 23562523
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttct 220  Q
    ||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| ||||||||||||||    
T  23562590 gcattcggttgttgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcagcatcgtttct 23562523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 22591167 - 22591101
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| ||||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||    
T  22591167 tgttgtcctacagcttgagctacagcctcaagcgcagcagcaatagcagcatcatttctcccagcca 22591101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 22594722 - 22594656
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| ||||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||    
T  22594722 tgttgtcctacagcttgagctacagcctcaagcgcagcagcaatagcagcatcatttctcccagcca 22594656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 20825402 - 20825461
Alignment:
Q  158 aggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    |||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  20825402 aggttgctgtcctacagcttgagccacagcctcaagtgcagcagcaatagcagcatcgtt 20825461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 30614915 - 30614990
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| ||||| |||||| ||||||| ||| |||  | |||||||||||| ||||| ||||||||||||||||    
T  30614915 gcattaggctgttgccccacaacttgagccacaactttcaatgcagcagcaatagcagcgtcgtttcttccagcca 30614990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 16257448 - 16257382
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| ||||||||||||| ||| || || ||||||||||| |||||||| ||||| |||||||    
T  16257448 tgttgtcctacagcttgagctatagcctcaagcgcagcagcaatagcagcatcatttctcccagcca 16257382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 28891363 - 28891305
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    ||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  28891363 ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcagcatcgtt 28891305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 28911267 - 28911209
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    ||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  28911267 ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcagcatcgtt 28911209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 28926535 - 28926477
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    ||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  28926535 ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcagcatcgtt 28926477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 17265744 - 17265687
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| || || |||||||||||||| ||||||||||| || |||||||    
T  17265744 acagcttgagctacggcctcaagtgcagcagcaatagcagcatcgttcctaccagcca 17265687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 21619964 - 21619904
Alignment:
Q  168 cccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| ||| |||| | |||||||||||| ||||| || |||||||||||||    
T  21619964 cccacagcttgagccacaacttccaatgcagcagcaatagcagcgtcatttcttccagcca 21619904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 41768262 - 41768309
Alignment:
Q  181 ctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||| ||| |||||||| | |||||||||||||||||||||||    
T  41768262 ctacagcttgtagagcagcagctaacgcagcatcgtttcttccagcca 41768309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 14883553 - 14883435
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | ||||| ||| ||||| || || |||||| |||| || || ||| | ||||| || ||||||||||| ||  ||||||||||||    
T  14883553 gaacactgcatgaccctgaaaatcctttcaatttccttcagccacttctgtgcaccgtcaggatcatacctacccttgaaagttggtggatgattcctca 14883454  T
Q  109 gaaaggtctctagcatcct 127  Q
    | || ||||| ||||||||    
T  14883453 ggaaagtctcaagcatcct 14883435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 22465897 - 22465955
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    ||||| ||||| ||||||||||| ||||| || ||||||||||| || |||||||||||    
T  22465897 ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcgatagcagcatcgtt 22465955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 20771086 - 20771143
Alignment:
Q  160 gttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    |||| ||||| ||||||||||| ||| | || |||||||||||||| |||||||||||    
T  20771086 gttgctgtcctacagcttgagcaacatcctcaagtgcagcagcaatagcagcatcgtt 20771143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 21982030 - 21981885
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||| ||||||||||||| |||||||||||| | | || ||  |||| |||||||| ||  ||||||| |||| ||| || || | ||||||| ||     
T  21982030 ctctcaacctctttgagccacttctgagctccattaggatcgtacattcctttgaaagttggtggatgatttctcataaaagtttccaacatcctcactc 21981931  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttg 178  Q
    || || | |||||||||   ||||| || || ||||||||||||||    
T  21981930 catcattcgcaccagcaccagcattcggctgctgtcccacagcttg 21981885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 30609154 - 30609247
Alignment:
Q  27 aaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctcta 120  Q
    |||| ||||||||  |||||||| || ||||||||||| ||| | |||||||| ||||| ||  ||||  |||| ||||||||||| |||||||    
T  30609154 aaaatcctctcaacgtctttgagtcatgtctgagctccgtcaagatcatatctgcccttaaagttaggcggatggttcctcagaaaagtctcta 30609247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 25851877 - 25851977
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||| || | ||||| ||| |||||||| || |||||  ||||||| |||||| | ||||| || |||||||| || ||  |||||||||||    
T  25851877 tgaacactgcatgaccctgaaaatcctttcaatctcctttagccatttctgagcaccatcaggatcatacctacccttgaatgtcggtggatgattcctc 25851976  T
Q  108 a 108  Q
    |    
T  25851977 a 25851977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 145; Significance: 2e-76; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 41395 - 41175
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||| |  || || ||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  41395 tgaacactgcatcacacgaaacactctctctatctctttgagccaagtctgagctccatcagggtcatatcttcccttgaaagtaggaggatgattcctc 41296  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| || |||| |||||||||||| | ||    
T  41295 agaaaagtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctgttgccccacagcttgagcgacggcttgtagtgcagcagctaacg 41196  T
Q  208 cagcatcgtttcttccagcca 228  Q
    |||||||||||||| ||||||    
T  41195 cagcatcgtttctttcagcca 41175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 29951 - 29848
Alignment:
Q  15 tgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaagg 114  Q
    |||||||| | |||||| ||||| ||||| || |||||||||||  |||||||  |||||||||||||||||||||||||| |||||||||||| |||||    
T  29951 tgcatcacacggaaaactctctcgatctccttaagccacgtctggactccatcggggtcatatcttcccttgaaagtaggaggatgattcctcataaagg 29852  T
Q  115 tctc 118  Q
    ||||    
T  29851 tctc 29848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 29848 - 29792
Alignment:
Q  170 cacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagc 226  Q
    ||||||||||||||| |||| |||||||||||| | |||||||| ||||||||||||    
T  29848 cacagcttgagctacggcttgtagtgcagcagctaacgcagcatagtttcttccagc 29792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 23065897 - 23066117
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||| || | ||| || |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || |||||||||||    
T  23065897 tgaacactgcattacactgaacactctctcaatctctttgagccacgtctgggctccatcagggtcatatcttcccttgaaagtaagaggatgattcctc 23065996  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |  |    
T  23065997 agaaaggtctctagcatcctcacttcaacacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacggcttgtagtgcagcagctaagg 23066096  T
Q  208 cagcatcgtttcttccagcca 228  Q
    |||| ||| ||||||||||||    
T  23066097 cagcgtcggttcttccagcca 23066117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 23075347 - 23075567
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||| || | ||| || |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || |||||||||||    
T  23075347 tgaacactgcattacactgaacactctctcaatctctttgagccacgtctgggctccatcagggtcatatcttcccttgaaagtaagaggatgattcctc 23075446  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |  |    
T  23075447 agaaaggtctctagcatcctcacttcaacacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacggcttgtagtgcagcagctaagg 23075546  T
Q  208 cagcatcgtttcttccagcca 228  Q
    |||| ||| ||||||||||||    
T  23075547 cagcgtcggttcttccagcca 23075567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 15 - 228
Target Start/End: Complemental strand, 22741880 - 22741667
Alignment:
Q  15 tgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaagg 114  Q
    |||||||| | |||||| |||||||||||||| ||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||| ||||    
T  22741880 tgcatcacacggaaaactctctcaatctctttaagccacgtctgggctccatcggggtcatatcttcccttgaaagtaggaggatgattcctcaggaagg 22741781  T
Q  115 tctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    |||| ||||||||||   ||||| | ||||||||||| |||||||||||||| ||||||||||||||||| |||| |||||||||||| | |||||| ||    
T  22741780 tctcaagcatcctcgactcagcattcgcaccagcatttgcattaggttgttgccccacagcttgagctacggcttgtagtgcagcagctaacgcagcgtc 22741681  T
Q  215 gtttcttccagcca 228  Q
    ||||||||||||||    
T  22741680 gtttcttccagcca 22741667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 228
Target Start/End: Complemental strand, 22732694 - 22732475
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    |||||||||||||| | ||| || ||||| ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  22732694 gaacactgcatcacacggaacactctctccatctcttggagccacgtctgggctccatcagggtcatatcttcccttgaaagtaggaggatgattcctca 22732595  T
Q  109 gaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgc 208  Q
    |||||||||||||||||||| || ||||| | ||||||||||| |||| |||||||||||||||||||| ||||||  ||| ||||||| |||| | |||    
T  22732594 gaaaggtctctagcatcctcacttcagcattcgcaccagcatttgcatcaggttgttgtcccacagcttaagctacgacttgtagtgcatcagctaacgc 22732495  T
Q  209 agcatcgtttcttccagcca 228  Q
    ||  |||| ||||| |||||    
T  22732494 agtgtcgtctcttctagcca 22732475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 23028379 - 23028163
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | |||||| ||||| ||||| || ||||||| ||  ||||| ||| |||||||||||||||||||||||| | ||||||||||||  |    
T  23028379 cactgcatcacacggaaaactctctcgatctccttaagccacgactaggctccgtcagggtcatatcttcccttgaaagtagcaggatgattcctcatga 23028280  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| ||||||||||   ||||| |  |||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||| | |||| |    
T  23028279 aggtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgtcccacagcttgagctacagcttgtagtgcagcagctaacgcacc 23028180  T
Q  212 atcgtttcttccagcca 228  Q
    ||| |||||||||||||    
T  23028179 atcttttcttccagcca 23028163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 23030301 - 23030503
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| || || ||||| || |||||| |||| ||||||||   ||||||||||||||||||||||||| |||||||||||| |||||| || ||||||    
T  23030301 gaaaactctttctatctccttaagccacatctgggctccatcggagtcatatcttcccttgaaagtaggaggatgattcctcaaaaaggtatcaagcatc 23030400  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||||   ||||| | ||||||||||| |||||||| |||||||| ||||||||||||||  ||| |||||||||||| | |||||| |||||||||||||    
T  23030401 ctcgactcagcattcgcaccagcatttgcattaggctgttgtccaacagcttgagctacgacttgtagtgcagcagctaacgcagcgtcgtttcttccag 23030500  T
Q  226 cca 228  Q
    |||    
T  23030501 cca 23030503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 22462398 - 22462182
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| ||| ||||||||||| ||||||||||| |||||||| |||||||||||||| |||||||| ||| ||||||| ||||  |    
T  22462398 cactgcatcacacggaaaatcctttcaatctctttaagccacgtctgggctccatcgtggtcatatcttcctttgaaagttggaggatgatttctcatga 22462299  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  | |||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  22462298 aggtctccaacatcctagtctcagcattcactccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 22462199  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  22462198 atcgttccttccagcca 22462182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 26 - 222
Target Start/End: Original strand, 24679027 - 24679223
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| ||||| ||||| || || |||||||| ||||||||  |||||||||||||||||||||||||| |||||||||| | ||||||||| ||||||    
T  24679027 gaaaactctctcgatctccttaagtcacgtctgggctccatcggggtcatatcttcccttgaaagtaggaggatgattcctaataaaggtctcaagcatc 24679126  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttc 222  Q
    ||||   ||||| |  |||||||||| |||||||| ||||||||||||||||| ||||| |||| |||||||||||| | |||| |||||| |||||    
T  24679127 ctcgtctcagcattcacaccagcatttgcattaggctgttgtcccacagcttgtgctacggcttgtagtgcagcagctaacgcaacatcgtctcttc 24679223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 20321520 - 20321729
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaa-gtaggatgatgattcctcagaaaggtctctagcat 124  Q
    |||||| || ||||||||||| ||||||||||| | ||||||  |||||||||||||||| ||| |||||| ||||||||||||| |||||||| |||||    
T  20321520 gaaaactctttcaatctctttaagccacgtctgggatccatcggggtcatatcttccctttaaaagtaggaggatgattcctcaggaaggtctcaagcat 20321619  T
Q  125 cctcgctacagcacttgcacca------gcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgttt 218  Q
    |||||   ||||| | ||||||      ||||| ||||||||||||||||||||||||| |||||| |||| |||||||||||| | |||| | ||||||    
T  20321620 cctcgactcagcattcgcaccagcatttgcatttgcattaggttgttgtcccacagcttaagctactgcttgtagtgcagcagctaacgcaacgtcgttt 20321719  T
Q  219 cttccagcca 228  Q
    ||||||||||    
T  20321720 cttccagcca 20321729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 202
Target Start/End: Complemental strand, 21319920 - 21319730
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| ||| || ||||| |||||||||||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||||  |    
T  21319920 cactgcatcacacggaaaatcctttcgatctccttgagccacgtctgggctccatcagggtcatatcttcccttgaaagttggaggatgattcctcatga 21319821  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagc 202  Q
    | ||||||||||||||||   ||||| |  | ||| |||||| ||| || |||||||||||||||||||||| |||||  |||||||||||    
T  21319820 aagtctctagcatcctcgtctcagcattcactccaacattcgtattcggctgttgtcccacagcttgagctatagcttgaagtgcagcagc 21319730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 228
Target Start/End: Complemental strand, 23104616 - 23104433
Alignment:
Q  40 tctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcact 139  Q
    ||||||| ||||||||||| ||||||||  ||||||||||||||||||||||| || ||||||||||||| |||||||| ||||  ||     ||||| |    
T  23104616 tctctttaagccacgtctgggctccatcggggtcatatcttcccttgaaagtaagaggatgattcctcaggaaggtctcaagcagact-----cagcatt 23104522  T
Q  140 tgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     ||||||||||| ||||| || |||||||||||| |||||||||| |||| |||||||||||| | |||||| |||||||| |||||||    
T  23104521 cgcaccagcatttgcatttggctgttgtcccacaacttgagctacggcttgtagtgcagcagctaacgcagcgtcgtttctaccagcca 23104433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 24816742 - 24816540
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| |||||||||||||||||||||| ||||  | ||||| ||||| |||||||||||| |||||||||||||||| || || | ||||    
T  24816742 gaaaatcctctcaacctctttgagccacgtctgagctacatctggatcataccttcctttgaaagtaggaggatgattcctcagaaaagtttccaacatc 24816643  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||  || | ||| | ||||||||||| |||||||| ||||| |||||| ||||||| ||| |||| | |||||||||||||||||| || ||| |||| |    
T  24816642 ctaacttcggcattagcaccagcattagcattaggctgttgccccacaacttgagccacaacttccaatgcagcagcaatcgcagcgtcattttttccgg 24816543  T
Q  226 cca 228  Q
    |||    
T  24816542 cca 24816540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 9487739 - 9487955
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  9487739 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 9487838  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  9487839 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 9487938  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  9487939 atcattccttccagcca 9487955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 17002523 - 17002739
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  17002523 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 17002622  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  17002623 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 17002722  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  17002723 atcattccttccagcca 17002739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 24656575 - 24656359
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| |||||||||||| || ||||||||||| ||||||||  ||||||||||||| ||||| || ||| ||||||||||||  |    
T  24656575 cactgcatcacacggaaaatcctctcaatctccttaagccacgtctgggctccatcggggtcatatcttcctttgaaggttggaggatgattcctcatga 24656476  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    |  |||| | |||||| |   ||||| |  || ||| |||||| ||||||||||||||||||||||| || ||||||| ||| |||||||| | |||| |    
T  24656475 aattctccaacatcctagtctcagcattcacaacagtattcgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcaac 24656376  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  24656375 atcgtttcttccagcca 24656359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 9339105 - 9339321
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  9339105 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 9339204  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||| ||||||||| || ||||||| ||| |||||||| | ||||||    
T  9339205 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtctcacagcttgggcaacagcttgtagagcagcagctaacgcagc 9339304  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  9339305 atcattccttccagcca 9339321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 228
Target Start/End: Original strand, 10872393 - 10872589
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  || ||||| | |||||| |||    
T  10872393 cctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatgaacgtctccaacatcctagct 10872492  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||||| || ||||||||||    
T  10872493 tcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcattccttccagcca 10872589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 16932030 - 16932246
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  16932030 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 16932129  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  16932130 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 16932229  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  16932230 atcattccttccagcca 16932246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 228
Target Start/End: Original strand, 21902083 - 21902279
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    |||||| | |||||| |||||| |||||||||| ||| | || |||||||| |||||||| ||  ||||||| |||||||| || || | || |||| ||    
T  21902083 cctctccacctctttaagccacttctgagctccgtcaggatcgtatcttcctttgaaagttggtggatgatttctcagaaaagtttccaacaacctcact 21902182  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     || || |||||||||||   ||||| || |||||||| ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  21902183 ccatcatttgcaccagcaccagcattcggatgttgtcctacagcttgagctatagcttcaagtgcagcagcaatagcagcatcgtttcttccagcca 21902279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 228
Target Start/End: Complemental strand, 23115956 - 23115760
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||| ||| | |  ||| |||  || ||||| | ||||||||      
T  23115956 cctctcaatctctttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttggagggttcttcttcatgaaagtctccaacatcctcgtc 23115857  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     ||||| | ||||||||||  |||||||||||||||||||||||||| || | ||||| ||| ||| |||| | |||||||||||| ||||||||||    
T  23115856 tcagcattcgcaccagcatctgcattaggttgttgtcccacagcttgggcaatagcttgtagagcaacagctaacgcagcatcgttccttccagcca 23115760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 27374792 - 27375008
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | |||  ||||||| ||| | |  ||| |||  |    
T  27374792 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctctgaaagtcggagggttcttcttcatga 27374891  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| ||||||||   |||| |    
T  27374892 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctgacgcaac 27374991  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  27374992 atcgtttcttccagcca 27375008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 16984763 - 16984979
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  16984763 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 16984862  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || |||||||  || |||||||| | ||||||    
T  16984863 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgaagagcagcagctaacgcagc 16984962  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  16984963 atcattccttccagcca 16984979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 202
Target Start/End: Complemental strand, 23039475 - 23039347
Alignment:
Q  74 atatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccaca 173  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    ||||| | |||||| |||| |||||||| ||||||||||||    
T  23039475 atatcttcccttgaaagtaggaggatgattcctcagaaaggtctatagcatcctcctctcagcattcgcaccatcatttgcattaggctgttgtcccaca 23039376  T
Q  174 gcttgagctacagcttctagtgcagcagc 202  Q
    ||||| |||||  ||| ||||||||||||    
T  23039375 gcttgtgctacgacttgtagtgcagcagc 23039347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 24873670 - 24873455
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||| ||| | |  ||  |||  |    
T  24873670 cactgcataacacggaaaatcctctcaatctctttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttggagggttcttattcatga 24873571  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| |   ||||| | ||||||||||| || ||||||||||||||||||||||| |  ||||||| |||||||||||| | |||| |    
T  24873570 aagtctccaacatcctagtctcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttg-ggaacagcttgtagtgcagcagctaacgcaac 24873472  T
Q  212 atcgtttcttccagcca 228  Q
    ||| |||||||||||||    
T  24873471 atcatttcttccagcca 24873455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 22322262 - 22322046
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || |||||| |||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  22322262 cactgcataacccggaaaatcctctcaatctccttaagccacatctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 22322163  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||| | ||| | ||  | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  22322162 acgtctccaacatcatagcttccgcgttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 22322063  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  22322062 atcgtttcttccagcca 22322046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 24704398 - 24704282
Alignment:
Q  13 actgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaa 112  Q
    |||||||||| | ||||| |||||| ||||| || ||||||||||  ||||||||| |||||||||||||||||||||||||| ||||||||||||  ||    
T  24704398 actgcatcacacggaaaatcctctcgatctccttaagccacgtctaggctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcatgaa 24704299  T
Q  113 ggtctctagcatcctcg 129  Q
     ||||||||||||||||    
T  24704298 agtctctagcatcctcg 24704282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 24713557 - 24713773
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | |||  ||||||| ||| | |  ||| |||  |    
T  24713557 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctctgaaagtcggagggttcttcttcatga 24713656  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| | ||  | ||||||||||| || |||||||||||||| |||||||| || ||||||| ||| |||||||| | ||||||    
T  24713657 acgtctccaacatcctagcttccgcgttcgcaccagcatttgcgttaggttgttgtccgacagcttgggcaacagcttgtagagcagcagctaacgcagc 24713756  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  24713757 atcgtttcttccagcca 24713773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 24265893 - 24266109
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || |||||||| || ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  24265893 cactgcataacccggaaaatcctctcaatctccttaagccacgtttgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 24265992  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||  | |||||| |||| || ||||||||||||||||||||||| || ||| ||| ||| |||||||| | | ||||    
T  24265993 acgtctccaacatcctagcttcagcgttcgcaccaacatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaacacagc 24266092  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  24266093 atcgtttcttccagcca 24266109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 41606003 - 41605787
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||| | || ||||||||||| ||||||||| ||||||| |  || |||||||| ||| | |  ||| |||  |    
T  41606003 cactgcataacccggaaaatcctctcaatccccttaagccacgtctgggctccatcagggtcataacgccctttgaaagttggagggttcttcttcatga 41605904  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||| ||||| || ||||||||||||||||||||||| || ||| ||| ||| |||||||| | |||| |    
T  41605903 aagtctccaacatcctagcttcagcattcgcacccgcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaacgcaac 41605804  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  41605803 atcgtttcttccagcca 41605787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 44382474 - 44382272
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  || ||||| | ||||    
T  44382474 gaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatgaacgtctccaacatc 44382375  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    || ||| ||||| | | ||| || ||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | |||| ||||||| |||||||    
T  44382374 ctagcttcagcattcgaaccggcgttcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcaacatcgttccttccag 44382275  T
Q  226 cca 228  Q
    |||    
T  44382274 cca 44382272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 23003763 - 23003823
Alignment:
Q  168 cccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  23003763 cccacagcttgagccacaacttctagtgcagcagcaatcgcagcatcgtttcgtccagcca 23003823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 28351548 - 28351614
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| ||||||||||||||| | || || ||||||||||| |||||||| |||||||||||||    
T  28351548 tgttgtcctacagcttgagctacaacctcaagcgcagcagcaatagcagcatcatttcttccagcca 28351614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 12578029 - 12578086
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| || || |||||||||||||| ||||| |||||||| |||||||    
T  12578029 acagcttgagctacggcctcaagtgcagcagcaatagcagcgtcgtttctaccagcca 12578086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 23275275 - 23275318
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||||||||||||||| || |||||||||||||| ||||||||    
T  23275275 acagcttgagctacagcctcaagtgcagcagcaatagcagcatc 23275318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 45535175 - 45535250
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| |||||||||||||| ||| |||  |   || ||||||| ||||||||||| ||||||||||    
T  45535175 gcattaggttgttgccccacagcttgagccacaacttgcaacacaacagcaatagcagcatcgttccttccagcca 45535250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 20849109 - 20849227
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | ||| | ||| |||||||| || |||||  ||||||| || | | | ||||| || ||||||||||| ||  ||||||||||||    
T  20849109 gaacactgcatgaccctgaatatcctttcaatctccttcagccatttctgagcaccgttaggatcatacctacccttgaaagttggtggatgattcctca 20849208  T
Q  109 gaaaggtctctagcatcct 127  Q
    | || ||||||||||||||    
T  20849209 ggaaagtctctagcatcct 20849227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 12571547 - 12571604
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| || || ||||||| |||||| ||||| |||||||| |||||||    
T  12571547 acagcttgagctacggcctcaagtgcagtagcaatagcagcgtcgtttctaccagcca 12571604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 24704278 - 24704245
Alignment:
Q  145 cagcattcgcattaggttgttgtcccacagcttg 178  Q
    |||||||||||||||||||||| |||||||||||    
T  24704278 cagcattcgcattaggttgttgccccacagcttg 24704245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 28351400 - 28351477
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaa 88  Q
    |||||||||||| | ||| |  ||||||| ||| || |||||| |||||||||||||| ||||||| || ||||||||    
T  28351400 acactgcatcactctgaagattctctcaacctccttaagccacttctgagctccatcagggtcatacctccccttgaa 28351477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 11 - 228
Target Start/End: Original strand, 2635 - 2852
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcaga 110  Q
    |||||||||||| | ||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||    
T  2635 acactgcatcacacggaaaatcctctcaatctctttgagccacgtttgagctccatcagggtcatatcttcccttaaaagtaggaggatgatttctcaga 2734  T
Q  111 aaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcag 210  Q
    || ||||| ||||||||| || ||||| | ||||||||||| |||  ||| || |||||||||||||||||||||||||||||||||||||||||| ||     
T  2735 aaagtctcaagcatcctcacttcagcattagcaccagcatttgcagcaggctgatgtcccacagcttgagctacagcttctagtgcagcagcaatcacat 2834  T
Q  211 catcgtttcttccagcca 228  Q
    ||||||||||||||||||    
T  2835 catcgtttcttccagcca 2852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 9867 - 10087
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| |||||| || |||||||||||    
T  9867 tgaacactgcatcacgcggaacaccctctcaatctccttgagccacgtctgggctccatcagggtcatatcttcccttaaaagtatgaggatgattcctc 9966  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||| ||||||||||||||||   ||||| | |||| |||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||| | ||    
T  9967 agaaaagtctctagcatcctcgtctcagcattcgcacgagcatttgcattaggctgttgtcccacagcttgagctacggcttgtagtgcagcagctaacg 10066  T
Q  208 cagcatcgtttcttccagcca 228  Q
    |||| ||||||||||||||||    
T  10067 cagcgtcgtttcttccagcca 10087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 132; Significance: 1e-68; HSPs: 3)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 812 - 1031
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||| |||||||||| ||| || |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  812 gaacattgcatcacgcggaatactctctcaatctctttgagccacgtctgggctccatcagggtcatatcttcccttgaaagtaggaggatgattcctca 911  T
Q  109 gaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgc 208  Q
    | ||||||||||||||||||    ||||| | ||||||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||| | | |    
T  912 ggaaggtctctagcatcctcatctcagcattcgcaccagcatttgcattaggctgttgtcccacagcttgagctacggcttgtagtgcagcagccaacac 1011  T
Q  209 agcatcgtttcttccagcca 228  Q
    ||| ||||||||||||||||    
T  1012 agcgtcgtttcttccagcca 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 3899 - 3973
Alignment:
Q  154 cattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||| ||||| ||||| ||||||||||| ||||| || ||||||||||| || ||||| ||||||||||||||||    
T  3899 cattcggttgctgtcctacagcttgagcaacagcctcaagtgcagcagctattgcagcgtcgtttcttccagcca 3973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 3803 - 3895
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctc 118  Q
    ||||| |||||||| ||||||||||||  |||||||||||||| ||||||| || || ||||| || ||  |||| ||||||| |||||||||    
T  3803 gaaaatcctctcaacctctttgagccaattctgagctccatcagggtcatacctccctttgaatgttggtggatggttcctcaaaaaggtctc 3895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 9143 - 9363
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||||||||  || || |||||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||||    
T  9143 tgaacactgcatcacgcgaaacactctctcaatctctttgagccacgtctgggctccatcagggtcataacttcccttaaaagtaggaggatgattcctc 9242  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    |||||||||||||||||||| ||| |||||||| |||||| ||| |||  ||| || ||||| ||||||| ||||||| |||||||||||||| ||||||    
T  9243 agaaaggtctctagcatccttgcttcagcacttacaccagtatttgcagcaggctgatgtccaacagctttagctacaacttctagtgcagcaacaatcg 9342  T
Q  208 cagcatcgtttcttccagcca 228  Q
    || ||||||||||||||||||    
T  9343 catcatcgtttcttccagcca 9363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 33 - 226
Target Start/End: Complemental strand, 3906 - 3713
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||     
T  3906 ctctctatctctttgagccaagtctgagctccatcggggtcatatcttcccttgaaagtaggaggatgattcctcagaaaagtctctagcatcctcgctt 3807  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagc 226  Q
    || ||||||||||||||||||||||||||||||| |||||||||||||| || || | |||||||||||| | |||| | ||||||||||||||    
T  3806 caacacttgcaccagcattcgcattaggttgttgccccacagcttgagccacggcctgtagtgcagcagctaacgcaacgtcgtttcttccagc 3713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 4471 - 4691
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||||||    ||||| ||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||||||||||    
T  4471 tgaacactgcatcacatgaaaaactctctctatctctttgagccaagtctgagctccatctgggtcatatcttcccttgaaagtaggaggatgattcctc 4570  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||| | || ||||||||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||| || || | |||||||||||| | ||    
T  4571 agaaaagactgtagcatcctcgcttcagtacttgcaccagcattcgcattaggctgttgccccacagcttgagccacggcctgtagtgcagcagctaacg 4670  T
Q  208 cagcatcgtttcttccagcca 228  Q
    |||| ||||||||||||||||    
T  4671 cagcgtcgtttcttccagcca 4691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 6368 - 6166
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| || ||||||||||| ||||||||||| ||||||||  |||||||||||||||| ||||||||| ||||||||||||| |||||||| ||||||    
T  6368 gaaaactctttcaatctctttaagccacgtctgggctccatcggggtcatatcttcccttaaaagtaggaggatgattcctcaggaaggtctcaagcatc 6269  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||||   ||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| |||||||||||||    
T  6268 ctcgactcagcattcgcaccagcatttgcattaggttgttgtcccacagcttgagctacagcttgtagtgcagcagctaacgcagcgtcgtttcttccag 6169  T
Q  226 cca 228  Q
    |||    
T  6168 cca 6166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 123; Significance: 2e-63; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 10 - 228
Target Start/End: Original strand, 939 - 1157
Alignment:
Q  10 aacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcag 109  Q
    ||||||||||||| |  || || ||||| |||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||| |||||||||||||    
T  939 aacactgcatcacacgaaacactctctctatctctttgagccaagtctgagctccattagggtcatatattcccttgaaagtaggaggatgattcctcag 1038  T
Q  110 aaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgca 209  Q
    ||| |||| ||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||| || || | |||||||||||| | ||||    
T  1039 aaaagtctatagcatcctcgcttcagcacttgaaccagcattcgcattaggctgttgccccacagcttgagccacggcctgtagtgcagcagctaacgca 1138  T
Q  210 gcatcgtttcttccagcca 228  Q
    || ||||||||||||||||    
T  1139 gcgtcgtttcttccagcca 1157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 10 - 228
Target Start/End: Original strand, 5356 - 5574
Alignment:
Q  10 aacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcag 109  Q
    ||||||||||||| |  || || ||||| |||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||| |||||||||||||    
T  5356 aacactgcatcacacgaaacactctctctatctctttgagccaagtctgagctccattagggtcatatattcccttgaaagtaggaggatgattcctcag 5455  T
Q  110 aaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgca 209  Q
    ||| |||| ||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||| || || | |||||||||||| | ||||    
T  5456 aaaagtctatagcatcctcgcttcagcacttgaaccagcattcgcattaggctgttgccccacagcttgagccacggcctgtagtgcagcagctaacgca 5555  T
Q  210 gcatcgtttcttccagcca 228  Q
    || ||||||||||||||||    
T  5556 gcgtcgtttcttccagcca 5574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 10264 - 10070
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||||| ||| || ||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  10264 tgaacactgcatcacgcggaacactctctcaatctccttgagccacgtctgggctccatcagggtcatatcttcccttaaaagtaggaggatgattcctc 10165  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagc 202  Q
    ||||| ||||||||||||||||   ||||| | | ||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  10164 agaaaagtctctagcatcctcgtctcagcattcgtaccagcatttgcattaggttgttgtcccacagcttgagctacggcttgtagtgcagcagc 10070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 10 - 224
Target Start/End: Complemental strand, 7534 - 7320
Alignment:
Q  10 aacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcag 109  Q
    |||||||||||||   ||| || |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  7534 aacactgcatcacatggaacactctctgaatctctttgagccacgtctgagctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcag 7435  T
Q  110 aaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgca 209  Q
    ||| || || | ||||||| || ||||| | |||||| ||||  ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||    
T  7434 aaaagtttccaacatcctcacttcagcattagcaccaacattttcattaggctgatgtcccacagcttgagctacagcttctagtgcagctgcaatcgca 7335  T
Q  210 gcatcgtttcttcca 224  Q
    || ||||||||||||    
T  7334 gcgtcgtttcttcca 7320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 122; Significance: 1e-62; HSPs: 4)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 21075 - 20886
Alignment:
Q  39 atctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcac 138  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| || |||||     
T  21075 atctctttgagccacgtctgatctccatcagggtcatatcttcccttgaaagtaggaggatgattcctaagaaaagtctctagcatcctcacttcagcat 20976  T
Q  139 ttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||| |||||||| || ||||||||| ||||||||||| ||| ||||||| ||||||||||||| |||||||||| |||||    
T  20975 ttgcaccagcatttgcattaggctgatgtcccacaacttgagctacaacttttagtgcaacagcaatcgcagcgtcgtttcttctagcca 20886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 32803 - 33019
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||||||   |||||| ||||| ||||| |  ||||||||||| ||||||||  ||||||||||||||||||| |||||| |||||||||| | ||    
T  32803 cactgcatcacatggaaaactctctcgatctcctgaagccacgtctgggctccatcggggtcatatcttcccttgaaggtaggaggatgattccttaaaa 32902  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| ||||||||||   ||||| |  |||||||||| |||||||| ||||| ||||||||||||||||| |||| | |||||||||| | ||||||    
T  32903 aagtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgccccacagcttgagctacggcttgtcgtgcagcagctaacgcagc 33002  T
Q  212 atcgtttcttccagcca 228  Q
    ||| |||||||||||||    
T  33003 atcatttcttccagcca 33019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 55575 - 55721
Alignment:
Q  26 gaaaaccctctcaatctctttgag-ccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcat 124  Q
    |||||| || ||||||||||| || ||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||| || ||||| || |||||    
T  55575 gaaaactctttcaatctctttaagtccacgtctgggctccatcggggtcatatcttcccttgaaagtaggaggatgattccttaggaaggtttcaagcat 55674  T
Q  125 cctcgctacagcacttgcaccagcattcgcattaggttgttgtccca 171  Q
    |||||  | |||| | ||||||||||| |||||||||||||||||||    
T  55675 cctcgacaaagcattcgcaccagcatttgcattaggttgttgtccca 55721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 9522 - 9448
Alignment:
Q  154 cattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||| || ||||| | |||||| |||||||  ||||||||||||||||||||||||||||| ||||| ||||    
T  9522 cattaggatgatgtccaatagcttgtgctacagtctctagtgcagcagcaatcgcagcatcgttccttcctgcca 9448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 4e-62; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 15145309 - 15145093
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||||| ||| || ||||||||||| || ||||||||||| ||||||||| ||||||| ||||| ||| || ||||| |||||||||||||||    
T  15145309 cactgcatcacgcggaacactctctcaatctccttaagccacgtctgggctccatcagggtcataccttcctttgcaaataggaggatgattcctcagaa 15145210  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||||||||||||| || ||||| || ||||||||||| ||  ||| || ||||| |||||||||||||||||||||||||||||||||||||||||    
T  15145209 acgtctctagcatcctcacttcagcatttacaccagcattcccaacaggctgatgtcctacagcttgagctacagcttctagtgcagcagcaatcgcagc 15145110  T
Q  212 atcgtttcttccagcca 228  Q
     ||||||||||||||||    
T  15145109 gtcgtttcttccagcca 15145093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 14043600 - 14043795
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||| || | || ||||||| |      
T  14043600 ctctctatctctttgagccacgtctgagctccatcaaggtcatatcttcctttgaaagtaggaggatgattcctcagaaaagtttataacatcctcacat 14043699  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||| ||||||| |||||||| || ||||||||||||||||| ||| ||||| ||||||||||||||||||| ||||| ||||||||||    
T  14043700 cagcatttgcatcagcatttgcattaggctgatgtcccacagcttgagccacaacttctcgtgcagcagcaatcgcagcgtcgttccttccagcca 14043795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 14353630 - 14353825
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||| || | || ||||||| |      
T  14353630 ctctctatctctttgagccacgtctgagctccatcaaggtcatatcttcctttgaaagtaggaggatgattcctcagaaaagtttataacatcctcacat 14353729  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||| ||||||| |||||||| || ||||||||||||||||| ||| ||||| ||||||||||||||||||| ||||| ||||||||||    
T  14353730 cagcatttgcatcagcatttgcattaggctgatgtcccacagcttgagccacaacttctcgtgcagcagcaatcgcagcgtcgttccttccagcca 14353825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 11526722 - 11526527
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||| || ||||||||| |||||||||||||||| ||||| | ||||||| ||     
T  11526722 ctctcaatctctttgagccacgtctgagctccatcagggtcatattttcctttaaaagtaggaggatgattcctcagaaaagtctccaacatcctcactt 11526623  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | |||||| | || |||||||| || || |||||||||| ||| |||||||| | | |||||||||||||| | ||||||||||||||||    
T  11526622 cagcattagcaccaacgttagcattaggctgatgccccacagcttaagccacagcttccaatacagcagcaatcgcatcgtcgtttcttccagcca 11526527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 8711486 - 8711702
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||  ||| | |  ||| |||  |    
T  8711486 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagccggagggttcttcttcatga 8711585  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  8711586 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 8711685  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  8711686 atcgtttcttccagcca 8711702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 11549491 - 11549275
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||||||||| |||||||| ||| | |   ||||||  |    
T  11549491 cactgcataacacggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttggagggttcctcctcatga 11549392  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | ||||||||   ||||| |  ||||||||||||| ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  11549391 aagtctccaacatcctcgtctcagcattaacaccagcattcgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 11549292  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  11549291 atcgttccttccagcca 11549275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 13689922 - 13690138
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  13689922 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 13690021  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  13690022 aagtctccaacatcctagcttcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 13690121  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  13690122 atcgtttcttccagcca 13690138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 18586560 - 18586344
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||||||||||| ||||||||||| ||||||||| ||||||| | ||| |||||||  ||| | |  ||| |||  |    
T  18586560 cactgcataactcggaaaatcctctcaatctctttaagccacgtctgggctccatcagggtcataacgtcctttgaaagccggagggttcttcttcatga 18586461  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | |||| |    
T  18586460 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcaac 18586361  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  18586360 atcgtttcttccagcca 18586344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 44787740 - 44787524
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  44787740 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 44787641  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||| || ||||| | ||| |||||||| | ||||||    
T  44787640 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcctgtagagcagcagctaacgcagc 44787541  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  44787540 atcgtttcttccagcca 44787524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 15157446 - 15157230
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  15157446 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 15157347  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||  | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  15157346 acgtctccaacatcctagcttcagcgttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 15157247  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  15157246 atcgtttcttccagcca 15157230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 9592248 - 9592464
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||| |||||| | ||||| ||||||||||||||| ||||||||||| ||||||||  ||||||||||||| |||||||| ||| ||||||||| ||  |    
T  9592248 cactacatcacacggaaaatcctctcaatctctttaagccacgtctgggctccatcggggtcatatcttcctttgaaagttggaggatgattccccatga 9592347  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||| | |   || || |  | ||||||||||| |||||||| |||||||||||||| || ||||||| ||| |||||| | |  |||||    
T  9592348 aggtctccaacatcatggtctcaacattcactccagcattcgcgttaggttggtgtcccacagcttgggcaacagcttgtagagcagcacctaatgcagc 9592447  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  9592448 atcgtttcttccagcca 9592464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 11233602 - 11233386
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  11233602 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagttggagggttcttcttcatga 11233503  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||| | | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  11233502 aagtctccaacatcctagcttcagtattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 11233403  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||| ||||    
T  11233402 atcgtttcttccggcca 11233386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 228
Target Start/End: Original strand, 10874348 - 10874549
Alignment:
Q  27 aaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcc 126  Q
    |||| |||||||||||| || ||||||||||| ||||||| | ||||||| | ||| |||||||| ||| | |  ||| |||  || ||||| | |||||    
T  10874348 aaaatcctctcaatctccttaagccacgtctgggctccataagggtcataacgtcctttgaaagtcggagggttcttcttcatgaacgtctccaacatcc 10874447  T
Q  127 tcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagc 226  Q
    | ||| ||||| | ||||| |||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | |||||||||||||||||||||    
T  10874448 tagcttcagcattcgcaccggcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcgtttcttccagc 10874547  T
Q  227 ca 228  Q
    ||    
T  10874548 ca 10874549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 14958389 - 14958593
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||||||||||| ||||||||| | ||| ||||| ||||||||||||| |||||||| ||| | |  ||||||| ||    
T  14958389 cactgcataacacggaaaatcctctcaatctctttaagccacgtcagggctacatcagggtcatatcttcctttgaaagttggagggttcttcctcataa 14958488  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | ||||||||   ||||| |  ||||||||||| | ||||||||||||||||||||||| || ||||||| ||| | |||||| |  |||||    
T  14958489 aagtctccaacatcctcgtctcagcattaacaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagtagcagctaatgcagc 14958588  T
Q  212 atcgt 216  Q
    |||||    
T  14958589 atcgt 14958593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 16725836 - 16725626
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||| | ||| |||||||| || || |||||||| ||||||||| ||||||||||||| |||||||| ||| ||||||| ||||  |    
T  16725836 cactgcatcacacggaatatcctttcaatctccttaagtcacgtctgggctccatcagggtcatatcttcctttgaaagttggaggatgatttctcatga 16725737  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  ||||||||||      ||| || ||||| | |||||| |||||||  |||||||||||||||||||||||    
T  16725736 aggtctccaacatcctagtctcagcattcacaccagcatt------aggctgatgtccaatagcttgtgctacagtctctagtgcagcagcaatcgcagc 16725643  T
Q  212 atcgtttcttccagcca 228  Q
     ||||||||||||||||    
T  16725642 gtcgtttcttccagcca 16725626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 17702850 - 17702640
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||| | ||| |||||||| || || |||||||| ||||||||| ||||||||||||| |||||||| ||| ||||||| ||||  |    
T  17702850 cactgcatcacacggaatatcctttcaatctccttaagtcacgtctgggctccatcagggtcatatcttcctttgaaagttggaggatgatttctcatga 17702751  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  ||||||||||      ||| || ||||| | |||||| |||||||  |||||||||||||||||||||||    
T  17702750 aggtctccaacatcctagtctcagcagtcacaccagcatt------aggctgatgtccaatagcttgtgctacagtctctagtgcagcagcaatcgcagc 17702657  T
Q  212 atcgtttcttccagcca 228  Q
     ||||||||||||||||    
T  17702656 gtcgtttcttccagcca 17702640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 216
Target Start/End: Original strand, 12691397 - 12691586
Alignment:
Q  27 aaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcc 126  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||| ||| | |  ||||| |  || ||||| | |||||    
T  12691397 aaaatcctctcaatctctttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttggagggttcttcctgatgaaagtctccaacatcc 12691496  T
Q  127 tcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgt 216  Q
    |||   ||||| |  ||||| ||||||| ||||||||||||||||||| ||| || ||||||| ||| | |||||| | || ||||||||    
T  12691497 tcgtctcagcattaacaccaacattcgcgttaggttgttgtcccacagtttgggcaacagcttgtagagtagcagctaacggagcatcgt 12691586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 20750309 - 20750508
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| ||| |||| ||| ||||||||| ||||| |||||||| ||||||| || || ||||| || ||  |||| ||||| ||||||||||| | ||||    
T  20750309 gaaaatcctttcaacctccttgagccacttctgaactccatcagggtcatacctccctttgaatgttggtggatggttccttagaaaggtctccaacatc 20750408  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||| |  || || |  || |||||   ||||| ||||||||||| ||||||||||| ||||| || ||||||||||||||  ||||||||||||||||||    
T  20750409 ctcacaccatcattaccagcagca---gcattcggttgttgtcctacagcttgagcaacagcctcaagtgcagcagcaatatcagcatcgtttcttccag 20750505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 14336362 - 14336468
Alignment:
Q  122 catcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttctt 221  Q
    |||||| ||| ||||| | ||||| |||||| | ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||||||||||||    
T  14336362 catcctagcttcagcattcgcaccggcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcgtttctt 14336461  T
Q  222 ccagcca 228  Q
    |||||||    
T  14336462 ccagcca 14336468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 18181744 - 18181827
Alignment:
Q  145 cagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||| ||||||||||||||||||||||| || ||||||| ||| |||||||| | |||||||| ||||||||||||||    
T  18181744 cagcattcgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcattgtttcttccagcca 18181827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 19151034 - 19151109
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||||||||| ||||||||||| ||||| || ||||||||||||||  |||||||||||||||||||||    
T  19151034 gcattcggttgttgtcctacagcttgagcaacagcctcaagtgcagcagcaatatcagcatcgtttcttccagcca 19151109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 15628438 - 15628508
Alignment:
Q  42 tctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaa 112  Q
    |||||||||||||||||||||| |||| | ||||| |||||||||||||||||  | ||||||||||||||    
T  15628438 tctttgagccacgtctgagctctatcaggatcataccttcccttgaaagtaggtgggtgattcctcagaaa 15628508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 15115058 - 15115134
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    |||||||||||||||||||||| | |||||||||||| |||| || ||||||||||| || ||  ||||||||||||    
T  15115058 cctctcaatctctttgagccacttttgagctccatcagggtcgtaccttcccttgaatgttggtggatgattcctca 15115134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 26091165 - 26091047
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | ||| | ||| |||||||| || |||||| ||||||| || ||| | ||||| || ||||||||||| ||  ||||||||||||    
T  26091165 gaacactgcatgaccctgaatatcctttcaatctccttcagccacttctgagcaccgtcaggatcatacctacccttgaaagttggtggatgattcctca 26091066  T
Q  109 gaaaggtctctagcatcct 127  Q
    | || ||||||||||||||    
T  26091065 ggaaagtctctagcatcct 26091047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 12801484 - 12801415
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||| ||||||||||| ||| | || |||||||||||||| |||||||||||||| |||||||    
T  12801484 ggttgctgtcctacagcttgagcaacaacctcaagtgcagcagcaatagcagcatcgtttctcccagcca 12801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 14256778 - 14256721
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||| ||||| || |||||||||||||| |||||||||||||| |||||||    
T  14256778 acagcttgagcaacagcctcaagtgcagcagcaatagcagcatcgtttctcccagcca 14256721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 14282582 - 14282525
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||| | || |||||||||||||| |||||||||||||| |||||||    
T  14282582 acagcttgagctacaacctcaagtgcagcagcaatagcagcatcgtttctaccagcca 14282525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 178
Target Start/End: Complemental strand, 12203150 - 12202998
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| ||||||||  |||||||||||| |||||||||||||| | |||||||| ||  ||||||| ||  ||||||| |||||||| || || | || |    
T  12203150 gaaaatcctctcaacttctttgagccacttctgagctccatcaggatcatatctacctctgaaagttggtggatgatttctcagaaaagtttccaacaac 12203051  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttg 178  Q
    ||| || || || |||||||||||   ||||| ||||| ||||  ||||||||    
T  12203050 ctcactccatcatttgcaccagcaccagcattcggttgctgtcttacagcttg 12202998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 12693800 - 12693856
Alignment:
Q  172 cagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||||| || |||||||||||||| ||||| |||||||| |||||||    
T  12693800 cagcttgagctacagcctcaagtgcagcagcaatagcagcgtcgtttctaccagcca 12693856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 12711889 - 12711834
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||| || ||||||||    
T  12711889 ggttgttgtcctacagcttgagcaacagcttcaagtgcagcagcgatagcagcatc 12711834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 49156183 - 49156301
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | ||||| ||| ||||| || || |||||| ||||||| || ||| | ||||| || |||||||| || ||  ||||||||||||    
T  49156183 gaacactgcatgaccctgaaaatcctttcaatttccttcagccacttctgagcaccgtcaggatcatacctacccttgaaggtcggtggatgattcctca 49156282  T
Q  109 gaaaggtctctagcatcct 127  Q
    | || ||||||||||||||    
T  49156283 ggaaagtctctagcatcct 49156301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 18050167 - 18050110
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| || || |||||||||||||| ||||| |||||||| |||||||    
T  18050167 acagcttgagctacggcctcaagtgcagcagcaatagcagcgtcgtttctaccagcca 18050110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 13677469 - 13677524
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||||||||| ||| ||||||| ||||| || |||||||||||||| ||||||||    
T  13677469 ggttgttgtcctacaacttgagcaacagcctcaagtgcagcagcaatagcagcatc 13677524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 15115185 - 15115251
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||| | |||||| |||||||||| || |||||||||||||| |||||||  ||||||| |||||    
T  15115185 tgttgttctacagctcgagctacagcctcaagtgcagcagcaatagcagcataatttcttctagcca 15115251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 40924184 - 40924066
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || ||||| |  || |||||||| || |||||| | ||||| |||||| |  |||| || ||||||||||| ||  ||||||||||||    
T  40924184 gaacactgcatgactcagaatattctttcaatctccttcagccacttttgagcaccatcaggagcatacctacccttgaaagttggtggatgattcctca 40924085  T
Q  109 gaaaggtctctagcatcct 127  Q
      || ||||||||||||||    
T  40924084 agaaagtctctagcatcct 40924066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 11769996 - 11769955
Alignment:
Q  183 acagcttctagtgcagcagcaatcgcagcatcgtttcttcca 224  Q
    |||||||| | |||||||||||||||||| ||||||||||||    
T  11769996 acagcttccaatgcagcagcaatcgcagcgtcgtttcttcca 11769955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 14145684 - 14145753
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||| ||||||| ||| ||||| || ||||||||||| || ||| |||||||||| |||||||    
T  14145684 ggttgctgtcctacagcttaagcaacagcctcaagtgcagcagcgatagcaacatcgtttctaccagcca 14145753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 14145606 - 14145662
Alignment:
Q  72 tcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctc 128  Q
    ||||| ||||||||||| || ||  |||||||||||| ||||||||| |||||||||    
T  14145606 tcataccttcccttgaatgttgggggatgattcctcaaaaaggtctccagcatcctc 14145662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 119; Significance: 6e-61; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 121534 - 121332
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||| ||||| || ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||  || ||||| ||||||    
T  121534 gaaaatcctctcgatctccttaagccacgtctgggctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcatgaaagtctcaagcatc 121435  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||||   ||||| |  ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||    
T  121434 ctcgtctcagcattcacaccagcattcgcattaggctgttgtcccacagcttgagctacagcttgtagtgcagcagctaacgcagcatcgtttcttccag 121335  T
Q  226 cca 228  Q
    |||    
T  121334 cca 121332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 71452 - 71509
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  71452 acagcttgagctacagcctcaagtgcagcagcaatagcagcatcgtttctaccagcca 71509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 11334 - 11276
Alignment:
Q  156 ttaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    |||||||| ||||| ||||||||||||||||| || ||||||||||||||  |||||||    
T  11334 ttaggttgctgtcctacagcttgagctacagcctcaagtgcagcagcaataacagcatc 11276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 117; Significance: 9e-60; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 42552 - 42772
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||| || | ||| || ||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||| |||| ||||||    
T  42552 tgaacactgcatgacccggaacactctctctatctctttgagccaagtctgagctccatcagggtcatatcttcctttgaaagtaggaggatggttcctc 42651  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||| ||||||||||||||| || ||||| | |||||| |||| |||||||| || ||| ||||||||||||| ||| ||||||  |||||||||||||    
T  42652 agaaaagtctctagcatcctcacttcagcattagcaccaacatttgcattaggctgatgtaccacagcttgagccacaacttctacggcagcagcaatcg 42751  T
Q  208 cagcatcgtttcttccagcca 228  Q
    || ||||||||||||||||||    
T  42752 caacatcgtttcttccagcca 42772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 76272 - 76492
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||| || | ||| || ||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||| |||| ||||||    
T  76272 tgaacactgcatgacccggaacactctctctatctctttgagccaagtctgagctccatcagggtcatatcttcctttgaaagtaggaggatggttcctc 76371  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||| ||||||||||||||| || ||||| | |||||| |||| |||||||| || ||| ||||||||||||| ||| ||||||  |||||||||||||    
T  76372 agaaaagtctctagcatcctcacttcagcattagcaccaacatttgcattaggctgatgtaccacagcttgagccacaacttctacggcagcagcaatcg 76471  T
Q  208 cagcatcgtttcttccagcca 228  Q
    || ||||||||||||||||||    
T  76472 caacatcgtttcttccagcca 76492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 34152 - 33936
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | |||||| ||||||| ||| || ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| |    
T  34152 cactgcatcacacggaaaactctctcaacctccttaagccacgtctgggctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcagga 34053  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| ||||||||||   ||||| |  |||||||||| |||||||| ||||| |||||||||||| ||||||||| |||||||||| | | ||||||    
T  34052 aggtctcaagcatcctcgactcagcattcacaccagcatttgcattaggctgttgccccacagcttgatctacagcttgtagtgcagcaactaacgcagc 33953  T
Q  212 atcgtttcttccagcca 228  Q
     ||||||||||||||||    
T  33952 gtcgtttcttccagcca 33936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 9e-60; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 22459529 - 22459313
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||||||   |||||| |||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||  |    
T  22459529 cactgcatcacatggaaaactctctcaatctctttaagccacgtctgggctccatcagggtcatatctccccttgaaagtaggaggatgattcctcaaga 22459430  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| ||||||||||   ||||| | ||||||||||| |||||||| ||||| ||||||||||||||||| |||| |||||||||||| | |||| |    
T  22459429 aggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacggcttgtagtgcagcagctaacgcaac 22459330  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  22459329 atcgtttcttccagcca 22459313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 22469958 - 22469742
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||||||   |||||| |||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||  |    
T  22469958 cactgcatcacatggaaaactctctcaatctctttaagccacgtctgggctccatcagggtcatatctccccttgaaagtaggaggatgattcctcaaga 22469859  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| ||||||||||   ||||| | ||||||||||| |||||||| ||||| ||||||||||||||||| |||| |||||||||||| | |||| |    
T  22469858 aggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacggcttgtagtgcagcagctaacgcaac 22469759  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  22469758 atcgtttcttccagcca 22469742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 20247124 - 20247344
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||| |  || || || || |||||||||||| | ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  20247124 tgaacactgcatcacacgaaacactctttctatctctttgagctaagtctgagctccatcagggtcatatcttcccttgaaattaggaggatgattcctc 20247223  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    | |||  |||| | |||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||| ||| | | |||||||||||| | ||    
T  20247224 acaaaactctccaacatcctcgcttcagcacttgctccagcattcgcattaggctgttgtcccacagcttgagccacaacatgtagtgcagcagctaacg 20247323  T
Q  208 cagcatcgtttcttccagcca 228  Q
     ||| ||||||||||||||||    
T  20247324 tagcgtcgtttcttccagcca 20247344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 22832608 - 22832392
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | |||||  ||||| ||||| || ||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||| ||    
T  22832608 cactgcatcacacggaaaattctctcgatctccttaagccacgtctgggctccatcgaggtcatatcttcccttgaaagtaggaggatgattcctcataa 22832509  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| ||||||||||   ||||| |  |||||||||| |||||||||||||| ||||||||||||||||| |||| |||||||||||| | ||||      
T  22832508 aagtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggttgttgccccacagcttgagctacggcttgtagtgcagcagctaacgcaat 22832409  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  22832408 atcgtttcttccagcca 22832392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 21044589 - 21044387
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||  |||||||||||| |||  |||| | ||||    
T  21044589 gaaaactctctcaatctctttgagccacgtctgagctccatcagggtcataccttcctttgaaggtaggtggatgattcctcacaaaaatctccaacatc 21044490  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||  || ||||| | ||||||||||| ||||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||  | |||||||||||    
T  21044489 ctaacttcagcattagcaccagcattagcattaggttgttgctccacagcttgagccacagcttccaatgcagcagcaatcgcagtgttgtttcttccag 21044390  T
Q  226 cca 228  Q
    |||    
T  21044389 cca 21044387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 39 - 175
Target Start/End: Original strand, 21752954 - 21753090
Alignment:
Q  39 atctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcac 138  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |||    
T  21752954 atctctttgagccaagtctgagttccatcagggtcatatcttcccttgaaagtaggaggatgattcctcagaaaagtctctagcatcctcgcttcaacac 21753053  T
Q  139 ttgcaccagcattcgcattaggttgttgtcccacagc 175  Q
    |||| ||||||||||||||||| ||||||||| ||||    
T  21753054 ttgctccagcattcgcattaggctgttgtcccgcagc 21753090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 18273729 - 18273924
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||| ||| ||||||||| |||||||||||||| | |||||||| || |||||||| ||  |||||||||||||||| ||||||| ||||||  ||     
T  18273729 ctctcaacctccttgagccacttctgagctccatcaggatcatatctacctttgaaagttggtggatgattcctcagaaaagtctctaacatcctaactt 18273828  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| |||||||||||    |||| ||||||||||| ||||||||||||||||| || |||||||||||||| ||| |||| |||||||||||||    
T  18273829 cagcatttgcaccagcaccaacattcggttgttgtcctacagcttgagctacagcctcaagtgcagcagcaatagcaacatcatttcttccagcca 18273924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 22117645 - 22117840
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||  |||||||||||| ||||||||| | ||||||  ||     
T  22117645 ctctcaatctctttgagccacgtctgagctccatcagggtcataccttcctttgaaagtaggcggatgattcctcaaaaaggtctccaacatcctaactt 22117744  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | |||||||||||  |||| || ||||| ||||||||  |||  |||||||| | ||||||| ||||| |||| ||||||||||||||||    
T  22117745 cagcattagcaccagcattaacattcggctgttgccccacagcccgagtcacagcttccaatgcagcaacaatcacagcgtcgtttcttccagcca 22117840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 19110276 - 19110492
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||| ||| | |  |||||||  |    
T  19110276 cactgcataacacggaaaatcctctcaatctctttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttggagggttcttcctcatga 19110375  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| | | || || |  ||||| ||||||| ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  19110376 aagtctccaacatcctagtttcatcattcacaccaacattcgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 19110475  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  19110476 atcgttccttccagcca 19110492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 16347046 - 16346830
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||| ||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  16347046 cactgcataactcggaaaatcctctccatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 16346947  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| ||||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  16346946 acgtctccaacatcctagcttcagcatttgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 16346847  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  16346846 atcgttccttccagcca 16346830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 16353695 - 16353479
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||| ||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  16353695 cactgcataactcggaaaatcctctccatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 16353596  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| ||||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  16353595 acgtctccaacatcctagcttcagcatttgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 16353496  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  16353495 atcgttccttccagcca 16353479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 21843119 - 21843335
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  21843119 cactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagttggagggttcttcttcatga 21843218  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || ||||||| ||  |||||||| | ||||||    
T  21843219 aagtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtaaagcagcagctaacgcagc 21843318  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  21843319 atcgtttcttccagcca 21843335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 16380019 - 16380218
Alignment:
Q  27 aaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcc 126  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||||||| || || |||||||||||  |||||||||||| ||| ||||| | ||| |    
T  16380019 aaaactctctcaatctctttaagccacgtctgagctccatcagggtcatacctccctttgaaagtaggcggatgattcctcataaaagtctccaacattc 16380118  T
Q  127 tcgctacagcacttgcacc-agcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
       |  ||||| ||||||| | |||| |||||||| || ||||||||||||||||| ||| |||| | ||||||||||||| |||| |||||||||||||    
T  16380119 aaacctcagcatttgcaccaaacattagcattaggctgatgtcccacagcttgagccacaacttccaatgcagcagcaatcacagcgtcgtttcttccag 16380218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 41350121 - 41349905
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  41350121 cactgcataacacggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 41350022  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | |||||||||||| | ||||||||||||||||||||||| || | ||||| ||| ||| |||| | ||||||    
T  41350021 acgtctccaacatcctagcttcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaatagcttgtagagcaacagctaacgcagc 41349922  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  41349921 atcgtttcttccagcca 41349905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 22435192 - 22434988
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| |||||| ||||| || ||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||| | ||    
T  22435192 cactgcatcacacggaaaatcctctcgatctccttaagccacgtctgggctccatcggggtcatatcttcccttgaaagtaggaggatgattcctaataa 22435093  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | |||||  |||||||||   ||||| |  |||||||||| ||||| || ||||| |||||||||||            |||||||||||| | ||||||    
T  22435092 aagtctcgcgcatcctcgtctcagcattcacaccagcatttgcattgggctgttgccccacagcttg------------tagtgcagcagctaacgcagc 22435005  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  22435004 atcgtttcttccagcca 22434988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 21834209 - 21834425
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  21834209 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 21834308  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| | ||  | |||||| |||| || ||||||||||||||||||||||| || ||||||| ||  |||||||| | ||||||    
T  21834309 acgtctccaacatcctagcttccgcgttcgcaccaacatttgcgttaggttgttgtcccacagcttgggcaacagcttgtatagcagcagctaacgcagc 21834408  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  21834409 atcgtttcttccagcca 21834425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 32 - 228
Target Start/End: Complemental strand, 17041445 - 17041249
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    |||||||||||| || ||||||||||| ||||||||| ||||||||||||| ||||||||  || | ||||| ||||  |||||||| | |||||| |      
T  17041445 cctctcaatctccttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttagagggtgatttctcatgaaggtctccaacatcctagtc 17041346  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     || || |  |||| |||||  ||||||||||||||||||||||||| |  ||||||| ||| |||||||| | |||| ||||||||||||| ||||    
T  17041345 tcatcagtcacaccggcatttacattaggttgttgtcccacagcttgggtaacagcttgtagagcagcagctaacgcaacatcgtttcttcccgcca 17041249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 33387467 - 33387265
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||||||| || |||||||| || ||||||||| ||||||| | ||| ||||| || ||| | |  ||| |||  || ||||| | ||||    
T  33387467 gaaaatcctctcaatctccttaagccacgtttgggctccatcagggtcataacgtcctttgaaggtcggagggttcttcttcatgaacgtctccaacatc 33387368  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    || ||| | ||  | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | |||| |||||||||||||||    
T  33387367 ctagcttccgcgttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcaacatcgtttcttccag 33387268  T
Q  226 cca 228  Q
    |||    
T  33387267 cca 33387265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 21177277 - 21177487
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||| |||||| | ||||| |||||| ||||| || ||||||||||| ||||||||| ||||||||||||| ||||| || ||| ||||||||||||  |    
T  21177277 cacttcatcacacggaaaatcctctcgatctccttaagccacgtctgggctccatcagggtcatatcttcctttgaaggttggaggatgattcctcatga 21177376  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   || || |  |||||      | |||||| || ||||| | |||||| ||||||   |||||||||||||||||||||||    
T  21177377 aggtctccaacatccttgtctcaacattcacacca------gaattaggctgatgtccaatagcttgtgctacaatctctagtgcagcagcaatcgcagc 21177470  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  21177471 atcgtttcttccagcca 21177487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 51329944 - 51329728
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||||||||||| || ||||||||||| ||||||||| ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  51329944 cactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataacgtcctttgaaagtcggagggttcttcttcatga 51329845  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| | ||  | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||  |||||||| | ||||||    
T  51329844 acgtctccaacatcctagcttccgcgttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtatagcagcagctaacgcagc 51329745  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || || |||||||    
T  51329744 atcattcctcccagcca 51329728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 24784311 - 24784095
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||| | |||||||||||| || ||||||| ||| ||||||||  ||||||||||||| ||||| || ||| ||||||||||||  |    
T  24784311 cactgcatcacacggaagatcctctcaatctccttaagccacgcctgggctccatctgggtcatatcttcctttgaaggttggaggatgattcctcatga 24784212  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    |  |||| | ||| || |   ||| | |  |||||||||| || ||||||||||||||||||||||  || ||||||| ||| |||||||| | | ||||    
T  24784211 aattctccaacattcttgtctcagtattcacaccagcatttgcgttaggttgttgtcccacagcttaggcaacagcttgtagagcagcagctaacccagc 24784112  T
Q  212 atcgtttcttccagcca 228  Q
    ||| || ||||||||||    
T  24784111 atcattccttccagcca 24784095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 21738471 - 21738272
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| ||||||||||||| |||||||||| ||| |||| || || || ||||| || ||  |||| ||||| ||||||||||| | ||||    
T  21738471 gaaaatcctctcaacctctttgagccacttctgagctccgtcagggtcctacctccctttgaatgttggtggatggttccttagaaaggtctccaacatc 21738372  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||  || || || |  || |||||   ||||| |||| ||| || ||||||||||| ||||| || |||||||||||||  |||||||| ||||| ||||    
T  21738371 cttactccatcattatcagcagca---gcatttggttattggcctacagcttgagcaacagcctcaagtgcagcagcaaaagcagcatcatttctaccag 21738275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 21741987 - 21741885
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| ||||||||||||| |||||||||||||  ||||||| || || ||||| || ||  |||| ||||||||||||||||| | ||||    
T  21741987 gaaaatcctctcaacctctttgagccacttctgagctccatctgggtcatacctccctttgaatgttggtggatggttcctcagaaaggtctccaacatc 21741888  T
Q  126 ctc 128  Q
    |||    
T  21741887 ctc 21741885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 22401241 - 22401306
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagt 91  Q
    ||||| |||| |||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||    
T  22401241 gaaaatcctcccaatctctttaagccacgtctgggctccatcagggtcatatcttcctttgaaagt 22401306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 36213164 - 36213045
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||| || | ||||| ||| |||||||| || |||||  ||||||| |||||| | ||||| || |||||||| || ||  |||||||||||    
T  36213164 tgaacactgcatgaccctgaaaatcctttcaatctccttcagccatttctgagcaccatcaggatcatacctacccttgaatgttggtggatgattcctc 36213065  T
Q  108 agaaaggtctctagcatcct 127  Q
    |  || ||||||||||||||    
T  36213064 aagaaagtctctagcatcct 36213045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 16670277 - 16670219
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    ||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  16670277 ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcagcatcgtt 16670219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 48426811 - 48426929
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | ||| | ||| ||||| || || |||||| ||||||| || ||| | ||||| || ||||||||||| ||  ||||||||||||    
T  48426811 gaacactgcatgaccctgaatatcctttcaatttccttcagccacttctgagcaccgtcaggatcatacctacccttgaaagttggtggatgattcctca 48426910  T
Q  109 gaaaggtctctagcatcct 127  Q
    | || ||||||||||||||    
T  48426911 ggaaagtctctagcatcct 48426929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 20853071 - 20853013
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    ||||| ||||| ||||||||||| ||||| || ||||||||||| || |||||||||||    
T  20853071 ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcgatagcagcatcgtt 20853013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 20922375 - 20922457
Alignment:
Q  38 aatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctcta 120  Q
    |||||| |||||||||||||| ||||||||  | ||||| ||||| ||||||  |||| |||| ||||| ||||| |||||||    
T  20922375 aatctccttgagccacgtctgtgctccatctggatcataccttcctttgaaaacaggaggatggttccttagaaaagtctcta 20922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 20398040 - 20397940
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||| || | ||||| ||| |||| |||||| |||||  ||||||| |||||| | ||||| || |||||||| || ||  |||||||||||    
T  20398040 tgaacactgcatgaccctgaaaatcctttcaacctctttcagccatttctgagcaccatcaggatcatacctacccttgaatgttggtggatgattcctc 20397941  T
Q  108 a 108  Q
    |    
T  20397940 a 20397940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 31536449 - 31536333
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | ||||| ||| ||||  || || |||||| ||||||| || ||| | ||||| || ||||||||||| |   ||||||||||||    
T  31536449 gaacactgcatgaccctgaaaatcctttcaacttccttcagccacttctgagcaccgtcaggatcatacctacccttgaaagtcgatggatgattcctca 31536350  T
Q  109 gaaaggtctctagcatc 125  Q
    | || ||||||||||||    
T  31536349 ggaaagtctctagcatc 31536333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 54831 - 54636
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| || |||||||||||| ||     
T  54831 ctctcaatctccttgagccacgtctgagctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcagaaaagtttctagcatcctcactt 54732  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | ||||||||||| |||  ||| || ||||||||| ||||||||||| ||||||||||| |||||||| || |||| |||||||||||||    
T  54731 cagcattagcaccagcatttgcagcaggctgatgtcccacaacttgagctacaacttctagtgcaacagcaatcacaacatcatttcttccagcca 54636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 116; Significance: 4e-59; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 224
Target Start/End: Complemental strand, 15971 - 15780
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||| |||||||||||||  |||||||||| |||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||     
T  15971 ctctctatctctttgagcccagtctgagctctatcagggtcatatcttcctttgaaagtaggaggatgattcctcagaaaagtctctagcatcctcgctt 15872  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttcca 224  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||  | | | |||||||||| | |||||| ||||||||||||    
T  15871 cagcacttgcaccagcattcgcattaggttgttgccccacagcttgagccacgacctgttgtgcagcagctaacgcagcgtcgtttcttcca 15780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 773 - 989
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| |  || | |||||||||||| || ||||||||||| ||||||||| ||||||||||||| |||||||| ||| ||||||||||||  |    
T  773 cactgcatcacacgaaatatcctctcaatctccttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttggaggatgattcctcatga 872  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  |||| ||||| ||||||||||||||| |||||||||| || ||||||| ||| |||||||| | ||||||    
T  873 aggtctccaacatcctagtctcagcagtcacacccgcatttgcattaggttgttgttccacagcttgggcaacagcttgtagagcagcagctaacgcagc 972  T
Q  212 atcgtttcttccagcca 228  Q
    ||||||||| |||||||    
T  973 atcgtttctcccagcca 989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 228
Target Start/End: Complemental strand, 138959 - 138763
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    |||||||||||| || ||||||||||| ||||||||| ||||||||||||| |||||||| ||| ||||||| ||||  |||||||| | || ||| |      
T  138959 cctctcaatctccttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttggaggatgatttctcatgaaggtctccaacaacctagtc 138860  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     ||||| |  |||||||||| ||||||| |||||||||||||||||| || ||||||| ||| |||||||| | |||| ||||||||||||||||||    
T  138859 tcagcagtcacaccagcatttgcattagattgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcaacatcgtttcttccagcca 138763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 115; Significance: 1e-58; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 30383 - 30189
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||||| ||| || |||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||||||| |||||||||||    
T  30383 tgaacactgcatcacgcggaacactctctcaatctctttgagccacgtctaggctccatcgaggtcatatcttcccttgaaagtaggaggatgattcctc 30284  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagc 202  Q
    || |||||||||||||||||||   ||||| |  |||||||||| |||||||| |||||||||||||||||||||||  ||| ||||||||||||    
T  30283 aggaaggtctctagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgtcccacagcttgagctacgtcttgtagtgcagcagc 30189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 1779 - 1873
Alignment:
Q  134 agcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||| ||||||||||||| | |||||| || |||||||||||| |||| |||||||| |||| ||||||||||||||| ||||||||||||||||    
T  1779 agcatttgcaccagcatttggattaggctgatgtcccacagctggagccacagcttcaagtgtagcagcaatcgcagcgtcgtttcttccagcca 1873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 1372 - 1177
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||| || || | ||||||| ||     
T  1372 ctctcaatttctttgagccacgtctgagctccatcagggtcatatcttcctttgaaagtaggaggatgattcctcagaaaagtatccaacatcctcactt 1273  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | ||||||||||| |||||||| || || || ||||||||||| ||||||||| ||||||||||||||||||| || |||||||||||||    
T  1272 cagcattagcaccagcatttgcattaggctgatgccctacagcttgagccacagcttctggtgcagcagcaatcgcagcgtcatttcttccagcca 1177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 4236 - 4041
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||| || || | ||||||| ||     
T  4236 ctctcaatttctttgagccacgtctgagctccatcagggtcatatcttcctttgaaagtaggaggatgattcctcagaaaagtatccaacatcctcactt 4137  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | ||||||||||| |||||||| || || || ||||||||||| ||||||||| ||||||||||||||||||| || |||||||||||||    
T  4136 cagcattagcaccagcatttgcattaggctgatgccctacagcttgagccacagcttctggtgcagcagcaatcgcagcgtcatttcttccagcca 4041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 112; Significance: 9e-57; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 13 - 228
Target Start/End: Original strand, 9139 - 9354
Alignment:
Q  13 actgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaa 112  Q
    |||||||||||| |||||| ||||||||||| || ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||| |||||| |||    
T  9139 actgcatcacgcggaaaactctctcaatctccttaagccacgtctgggctccatcagggtcatatcttcccttgaaagtaggaggatgagtcctcataaa 9238  T
Q  113 ggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagca 212  Q
    ||||||||||||||||    ||||| |  |||||||||| ||||||||   ||||||||||||||||||||| |||| |||||||||| | | |||||||    
T  9239 ggtctctagcatcctcatctcagcagtcacaccagcatttgcattaggccattgtcccacagcttgagctacggcttgtagtgcagcaactaacgcagca 9338  T
Q  213 tcgtttcttccagcca 228  Q
    ||||| ||||||||||    
T  9339 tcgttacttccagcca 9354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 107157 - 106941
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || ||||||| ||||||||||||||| ||||||||||| ||||||| | ||||||| | ||| |||||||| ||| | |  ||| |||  |    
T  107157 cactgcataacacagaaaatcctctcaatctctttaagccacgtctgggctccattagggtcataacgtcctttgaaagttggagggttcttcttcatta 107058  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| ||| ||||| | ||||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | | || |    
T  107057 acgtctccaacatcctagcttcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacacaac 106958  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  106957 atcgtttcttccagcca 106941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 93232 - 93078
Alignment:
Q  54 gtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcg 153  Q
    ||||||||||||||| ||||||| ||||||||||| |  ||  |||| ||||||||||| ||||| ||||||||| || || || | ||| ||||         
T  93232 gtctgagctccatcagggtcataccttcccttgaatgctggtggatggttcctcagaaaagtctccagcatcctcacttcaccattagcagcagct---- 93137  T
Q  154 cattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
         ||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  93136 -----ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcagcatcgtt 93078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 24110 - 23916
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  24110 tgaacactgcatcacgcggaacaccctctcaatctccttgagccacgtctgggctccatcagggtcatatcttcccttaaaagtaggaggatgattcctc 24011  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagc 202  Q
    | ||| ||||||||||||||||   ||||| | ||||||||||| |||||||| | |||||||||| ||||||||||  ||| ||||||||||||    
T  24010 aaaaaagtctctagcatcctcgtctcagcattcgcaccagcatttgcattaggctattgtcccacaacttgagctacgacttgtagtgcagcagc 23916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 472 - 256
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | | | | |||||| ||||  || ||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||  |    
T  472 cactgcatcacacggtagatcctctcgatcttcttaagccacgtctgagctccatcaaggtcatatcttcccttgaaggtaggaggatgattcctcatga 373  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||||||||||||||   ||||| |  | ||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| ||||||||    
T  372 aagtctctagcatcctcgtctcagcattcactccagcattcgcattaggttgttgccccatagcttgagctacagcttgtagtgcagcagctatcgcagc 273  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||| ||||    
T  272 atcgtttcttccggcca 256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 1016 - 796
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||| |||||||| ||| || ||||||||||| |||||||||||||| |||| |||| |||||||||||||||| ||||||||| |||||||||||    
T  1016 tgaacactacatcacgcggaacactctctcaatctccttgagccacgtctgggctctatcagggtcatatcttcccttaaaagtaggaggatgattcctc 917  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||| |||||||||||||||    || || | ||| ||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||| | |     
T  916 agaaaagtctctagcatcctcatctcaacattcgcatcagcatttgcattaggctgttgtcccacagcttgagctacggcttgtagtgcagcagctaaca 817  T
Q  208 cagcatcgtttcttccagcca 228  Q
    || | ||||||||||||||||    
T  816 catcgtcgtttcttccagcca 796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 355 - 571
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| |||||| ||||| || |||||| | || ||||||||| ||||||||||||||||||| |||||| ||||||||||||  |    
T  355 cactgcatcacacggaaaatcctctcgatctccttaagccacatatgggctccatcagggtcatatcttcccttgaaggtaggaggatgattcctcatga 454  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| ||||||||||   ||||| |  ||||||||||||||||||| ||||| ||||||||||||||||| |||| |||||||||||| | ||||||    
T  455 aggtctcaagcatcctcgtctcagcattcacaccagcattcgcattaggctgttgccccacagcttgagctacggcttgtagtgcagcagctaacgcagc 554  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  555 atcgtttcttccagcca 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 109; Significance: 6e-55; HSPs: 5)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 163 - 379
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||| |    
T  163 cactgcatcacacggaaaactctctcaatatctttaagccacgtctgggctccatcggggtcatatcttcccttgaaagtaggaggatgattcctcagga 262  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| ||||||||||   || || |  |||||||||| |||||||||||||| |||||||||||||||||  ||| |||||||||||| | ||||||    
T  263 aggtctcaagcatcctcgactcatcattcacaccagcatttgcattaggttgttgccccacagcttgagctacgacttgtagtgcagcagctaacgcagc 362  T
Q  212 atcgtttcttccagcca 228  Q
     |||||| |||||||||    
T  363 gtcgttttttccagcca 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 11656 - 11581
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||| ||||| ||||||||||| ||||| || ||||||||||| ||  |||| |||||||| |||||||    
T  11656 gcattcggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcgataacagcgtcgtttctaccagcca 11581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 11780 - 11697
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcag 109  Q
    ||||| |||||||| ||| ||||||||| |||||||||| ||| ||||||| || || || ||||| ||  |||||||||||||    
T  11780 gaaaatcctctcaacctccttgagccacttctgagctccgtcagggtcatacctccctttaaaagttggtggatgattcctcag 11697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 19836 - 19761
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||| ||||| ||||||||||| ||||| || ||||||||||| ||  |||| |||||||| |||||||    
T  19836 gcattcggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcgataacagcgtcgtttctaccagcca 19761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 19960 - 19877
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcag 109  Q
    ||||| |||||||| ||| ||||||||| |||||||||| ||| ||||||| || || || ||||| ||  |||||||||||||    
T  19960 gaaaatcctctcaacctccttgagccacttctgagctccgtcagggtcatacctccctttaaaagttggtggatgattcctcag 19877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 9331 - 9537
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||||  ||| || ||||||||||| |||||||||||||| ||||||||  |||||||||||||||| |||||| || |||||||||||    
T  9331 tgaacactgcatcacgaggaacactctctcaatctccttgagccacgtctgggctccatcggggtcatatcttcccttaaaagtaagaggatgattcctc 9430  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||| ||||||||||||||||   ||||| | ||||||||||| |||||||| |||||||||||||||| ||||||  ||| |||||||||||| | ||    
T  9431 agaaaagtctctagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacagcttaagctacgacttgtagtgcagcagctaacg 9530  T
Q  208 cagcatc 214  Q
    |||||||    
T  9531 cagcatc 9537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 16733 - 16527
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||||||| | ||| || ||||||||||| |||||||||||||| ||||||||| ||||||||||||| || ||||||||| |||||||||||    
T  16733 tgaacactgcatcacacggaacactctctcaatctccttgagccacgtctgggctccatcagggtcatatcttccattaaaagtaggaggatgattcctc 16634  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcg 207  Q
    ||||| ||||||||||||||||   ||| | | ||| ||||||| |||||||| |||||||||||||||||||||||  ||| |||||||||||| | ||    
T  16633 agaaaagtctctagcatcctcgtctcagtattcgcagcagcatttgcattaggctgttgtcccacagcttgagctacgacttgtagtgcagcagctaacg 16534  T
Q  208 cagcatc 214  Q
    |||||||    
T  16533 cagcatc 16527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 766 - 982
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | |||||| || || ||||| || ||||||||||| | ||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  766 cactgcataacacggaaaactctttctatctccttaagccacgtctgggatccatcggggtcatatcttcccttgaaagtaggaggatgattcctcagaa 865  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| ||||||||||   ||||| | ||||||||||| |||||||| |||||||||||| |||||||||| |||| ||||||| |||| | ||||||    
T  866 aggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgtcccacaacttgagctacggcttgtagtgcaacagctaacgcagc 965  T
Q  212 atcgtttcttccagcca 228  Q
     ||||||||||||||||    
T  966 gtcgtttcttccagcca 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 23606 - 23390
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| |||||| ||||| || | ||||||||| ||||||||| ||||||||||||| ||||| |||||| ||||||||||||  |    
T  23606 cactgcatcacacggaaaatcctctcgatctccttaatccacgtctgggctccatcagggtcatatcttcctttgaaggtaggaggatgattcctcatga 23507  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||||||||||||||   ||||| |  ||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||| | |||| |    
T  23506 aagtctctagcatcctcgtctcagcattcacaccagcattcgcattaggttgttgccccacatctttagctacagcttgtagtgcagcagctaacgcaac 23407  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  23406 atcgtttcttccagcca 23390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 31211 - 31427
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | |||||| ||||| ||||| || ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||  |    
T  31211 cactgcatcacacggaaaactctctcgatctccttaagccacgtctgggctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcaaga 31310  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    |||| || |||||| |||    |||| | |||| |||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||| | ||||||    
T  31311 aggtttccagcatcttcgacttagcattcgcactagcatttgcattaggctgttgtcccacagcttgagctacggcttgtagtgcagcagctaacgcagc 31410  T
Q  212 atcgtttcttccagcca 228  Q
     ||||||||||||||||    
T  31411 gtcgtttcttccagcca 31427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 105119 - 105335
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||| || |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||| |||| |||||| |||    
T  105119 cactgcatgacacggaacactctctcaatctctttgagccacgtctgagctccatcagggtcatatcttcctctgaaagtaggaggatggttcctcggaa 105218  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | ||||||  || || || ||||||||||||| |||||||| || || | |||||||||||| ||| ||| |||||||||||||||||||||    
T  105219 aagtctccatcatccttacttcaacatttgcaccagcatttgcattaggctgatgccacacagcttgagccacaacttttagtgcagcagcaatcgcagc 105318  T
Q  212 atcgtttcttccagcca 228  Q
     ||||||||||||||||    
T  105319 gtcgtttcttccagcca 105335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 12 - 211
Target Start/End: Complemental strand, 49725 - 49526
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | |||||| ||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||   ||| |||||||||||||||    
T  49725 cactgcatcacacggaaaactctctcaatctctttgagccacatctgggctccatcggggtcatatcttcccttgaaaaccggaggatgattcctcagaa 49626  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| ||||||||| || ||||| | |||||||||||| ||||||| ||||| ||||||||||||||||| |||| || ||||||||| | ||||||    
T  49625 aggtctccagcatcctcacttcagcattcgcaccagcattcacattaggctgttgccccacagcttgagctacggcttgtaatgcagcagctaacgcagc 49526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 43777 - 43834
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||| ||| | || |||||||||||||| |||||||||||||| |||||||    
T  43777 acagcttgagcaacaacctcaagtgcagcagcaatagcagcatcgtttctaccagcca 43834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 8 - 202
Target Start/End: Original strand, 15831 - 16025
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||||||||  || || ||||||||||| |||||||||||||  ||||||||||||| |||||||||||| |||||| || |||||||||||    
T  15831 tgaacactgcatcacgcgaaacactctctcaatctccttgagccacgtctaggctccatcatggttatatcttcccttaaaagtaagaggatgattcctc 15930  T
Q  108 agaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagc 202  Q
    ||||| ||||||||||||||||   ||||| | |||||| |||| |||||||| |||| |||||||||||||||||| |||| ||||||||||||    
T  15931 agaaaagtctctagcatcctcgtctcagcattcgcaccaacatttgcattaggctgttatcccacagcttgagctacggcttgtagtgcagcagc 16025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 492 - 708
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| |||||||||||| || |||||||| || ||||||||| ||||||||||||| ||||| || ||| ||||||||||||  |    
T  492 cactgcatcacacggaaaatcctctcaatctccttaagccacgtttgggctccatcagggtcatatcttcctttgaaggttggaggatgattcctcatga 591  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| |   ||||| |  |||| |||||||  ||||||||||||||||||||||| || ||| ||| ||| |||||||| | ||||||    
T  592 aagtctccaacatcctagtctcagcattcacacccgcattcgagttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaacgcagc 691  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  692 atcgtttcttccagcca 708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 228
Target Start/End: Original strand, 22587 - 22745
Alignment:
Q  70 ggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcc 169  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||   ||||| | ||||||||||| |||||||| ||||| ||    
T  22587 ggtcatatcttcccttgaaagtaggaggatgattcctcataaaggtctcaagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgccc 22686  T
Q  170 cacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||    
T  22687 cacagcttgagctacagcttgtagtgcagcagctaacgcagcatcgtttcttccagcca 22745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 70 - 228
Target Start/End: Original strand, 38011 - 38169
Alignment:
Q  70 ggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcc 169  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||   | ||| | ||||||||||| |||||||| ||||| ||    
T  38011 ggtcatatcttcccttgaaagtaggaggatgattcctcataaaggtctcaagcatcctcgtctccgcattcgcaccagcatttgcattaggctgttgccc 38110  T
Q  170 cacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||    
T  38111 cacagcttgagctacagcttgtagtgcagcagctaacgcagcatcgtttcttccagcca 38169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 660 - 876
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| |  |||| |||||| ||||| || ||| ||||||| ||||||||  ||||||||||||||||||| |||||| ||||||||||||  |    
T  660 cactgcatcactcgaaaaatcctctcgatctccttaagcaacgtctgggctccatcggggtcatatcttcccttgaaggtaggaggatgattcctcatga 759  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | ||||||||   ||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |  |||||    
T  760 aagtctccaacatcctcgtctcagcattcacaccagcattcgcattaggttgttgccccacagcttgagctacagcttgtagtgcagcagctaatgcagc 859  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  860 atcgtttcttccagcca 876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 17336 - 17142
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||||||| || ||||| ||||||||||||||| |||||||| ||||||||||| ||||| ||||||||| |||||| || |||||||||||| ||     
T  17336 ctctcaatctcattaagccaagtctgagctccatcagggtcatattttcccttgaaattaggaggatgattcc-cagaaaagtttctagcatcctcactt 17238  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    || || | ||||||||||| |||  | | || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  17237 caacattagcaccagcatttgcagcatgctgatgtcccacagcttgagctacaacttctagtgcagcagcaatcgcagcatcgtttcttctagcca 17142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 16355 - 16550
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| |  ||||||||||||  |||||||| | ||||||  ||     
T  16355 ctctcaatctctttgagccacgtctgagctccatcagggtcataccttcccttgaaggtacgcggatgattcctcaagaaggtctccaacatcctaactt 16454  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | ||||| |||||  ||||||| ||||| |||||||||||||| |||||||| | |||||||||||||||||| ||||||||||||||||    
T  16455 cagcattagcacccgcattaacattaggctgttgccccacagcttgagccacagcttccaatgcagcagcaatcgcagcgtcgtttcttccagcca 16550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 9268 - 9470
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| || |||||||| |||||||||||||| ||||| ||  | ||||| ||||| ||||||  |||  |||| ||||||||||| ||||||| |||     
T  9268 gaaaactctttcaatctccttgagccacgtctgtgctccgtctggatcataccttcctttgaaaacagggggatggttcctcagaaaagtctctaacatt 9367  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||  |  ||||| | |||||| |||| |||||  |||||||||| ||||||||||||||||| || |  ||||||||||| ||| |||| || |||||||    
T  9368 ctaacctcagcattcgcaccaacattagcatttagttgttgtcctacagcttgagctacagcatccaacgcagcagcaatagcaacatcattccttccag 9467  T
Q  226 cca 228  Q
    |||    
T  9468 cca 9470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 99; Significance: 5e-49; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 36186 - 35984
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| ||||| ||||| || ||||||||||  ||||||||  |||||||||||||||||||||||||| |||||||||||| | ||||||| ||||||    
T  36186 gaaaactctctcgatctccttaagccacgtctcggctccatcgaggtcatatcttcccttgaaagtaggaggatgattcctcatacaggtctcaagcatc 36087  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||||   ||||| | ||||||||||| |||||||| ||||| ||||||||||||||||| |||| |||||||||||| | |||||||||||| |||| ||    
T  36086 ctcgtctcagcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacggcttgtagtgcagcagctaacgcagcatcgttccttctag 35987  T
Q  226 cca 228  Q
    |||    
T  35986 cca 35984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 27304 - 27382
Alignment:
Q  40 tctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctc 118  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||| |  |||||||||||||||| |||||    
T  27304 tctctttgagctacgtctgagctccatcagggtcataccttcctttgaaagtaagtggatgattcctcagaaaagtctc 27382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 27411 - 27486
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| ||||| || || |||||||| |||||||| | |||||||||||| || || || |||||||||||||    
T  27411 gcattagggtgttgcccaaccgcttgagcaacagcttccaatgcagcagcaatagcggcgtcatttcttccagcca 27486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 11717 - 11906
Alignment:
Q  39 atctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcac 138  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||| ||  |||||||| ||| || |||||||||||| || |||||     
T  11717 atctctttgagccacgtctaagctccatcagggtcatatcttcccttaaaagtaggaggacaattcctcaaaaaagtttctagcatcctcacttcagcat 11816  T
Q  139 ttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    | |||||| |||| |||  ||| || |||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||    
T  11817 tagcaccaacatttgcagcaggctgatgtcccacagcttgagctacagcttcaagtgcaacagcaatcacatcatcgtttcttccagcca 11906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 9384 - 9564
Alignment:
Q  48 agccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccag 147  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||||   ||||| |  ||||||    
T  9384 agccacgtctgggctccatcagggtcatatcttcccttgaaagtaggaggatgattcctcaggaaggtttccagcatcctcgactcagcattcccaccag 9483  T
Q  148 cattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||| |||||||| ||||| ||||||||||||||||| |||| || ||||||||| | |||| ||||||||||||||||||    
T  9484 catttgcattaggctgttgccccacagcttgagctacggcttgtaatgcagcagctaacgcaacatcgtttcttccagcca 9564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 955 - 1050
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    ||||||||||| | |||||| ||||||||||| || ||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  955 cactgcatcacacggaaaactctctcaatctccttaagccacgtctgggctccatcagggtcatatcttcccttgaaagtaggaggatgattcctc 1050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 65910 - 65694
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | |||||| ||||  ||||| || ||||||||||| ||||||||  ||||||||||||||||||||||| || |||||||||||| ||    
T  65910 cactgcatcactcggaaaactctcttgatctccttaagccacgtctgggctccatcggggtcatatcttcccttgaaagtaagaggatgattcctcataa 65811  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| ||||||||||   ||||| |  |||||||||| |||||||| ||||| ||||||||||||||||| |||| |||||||||||| | |||  |    
T  65810 aggtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgccccacagcttgagctacggcttgtagtgcagcagctaacgccac 65711  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  65710 atcgttccttccagcca 65694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 57014 - 56819
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||| |||||||||||| ||| ||||| | ||||||  ||     
T  57014 ctctcaatctctttgagccacgtctgagctccatcagggtcgtatcttcctttgaaagtaggaggatgattcctcataaaagtctccaacatcctaactt 56915  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | |||||| |||| ||||| || ||||| |||| ||||||||| |||||||| | ||||||||||||| || | ||||||||||||||||    
T  56914 cagcattagcaccaacattagcatttggctgttgccccatagcttgagcgacagcttccaatgcagcagcaatcacatcgtcgtttcttccagcca 56819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 14968 - 14752
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| |||||| ||||| || ||||||||||| ||||||||  |||||||||||||||||||| ||||| ||||||||||||  |    
T  14968 cactgcatcacacggaaaatcctctcgatctccttaagccacgtctgggctccatcggggtcatatcttcccttgaaaataggaggatgattcctcatga 14869  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| || |||| ||   ||||| |  ||||||||||||||||||| ||||| |||||||||||||||||  ||| |||||||||||| | | || |    
T  14868 aggtctcaagaatccacgtctcagcattcacaccagcattcgcattaggctgttgccccacagcttgagctacgacttgtagtgcagcagctaacacaac 14769  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  14768 atcgtttcttccagcca 14752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 12957 - 12762
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||   || |||||||| |||| ||||| | ||||||  ||     
T  12957 ctctcaatctctttgagccacgtctgagctccatcagggtcataccttcctttgaaggtagatggaagattcctctgaaaagtctccaacatcctaactt 12858  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | |||||||| || |||||||| |||||||||||||||||||| ||| |||| | |||||||||||||||| | ||||||||||||||||    
T  12857 cagcattagcaccagcgttagcattaggctgttgtcccacagcttgagccacaacttccaatgcagcagcaatcgcaacgtcgtttcttccagcca 12762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 30419 - 30224
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||| ||||||||||||| |||||||||||||| | || || |||||||||||||| ||  ||||||| |||| ||| || || | ||||||| ||     
T  30419 ctctcaacctctttgagccacttctgagctccatcaggatcgtaccttcccttgaaagttggtggatgatttctcaaaaaagtttccaacatcctcactc 30320  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    || || | |||||||||   ||||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  30319 catcattcgcaccagcaccagcattcggttgttgtcccacagcttgagctacggcttcaagtgcagcagcaatagcagcatcgtttcttccagcca 30224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 11790 - 11594
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| || || |||||||| ||||||||||| ||||||||  |||||||||||||||||||||||| | |||||||||||| ||||||||| ||||||    
T  11790 gaaaactctttctatctctttaagccacgtctgggctccatcggggtcatatcttcccttgaaagtagcaggatgattcctcataaaggtctcaagcatc 11691  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||||   ||||| | |||||||      ||||||| || ||||| ||| |||| ||| |||||||||||||||||||||||||||| | |||||||||||    
T  11690 ctcgactcagcattcgcaccag------cattaggctgatgtccaacaacttgtgctccagcttctagtgcagcagcaatcgcagctttgtttcttccag 11597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 7034 - 6932
Alignment:
Q  15 tgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaagg 114  Q
    ||||| || |||||||| || || ||||| || ||||||||||| ||||||||  |||||||||||||||||||||||| | |||||||||||| |||||    
T  7034 tgcataacacagaaaactctttcgatctccttaagccacgtctgggctccatcggggtcatatcttcccttgaaagtagcaggatgattcctcataaagg 6935  T
Q  115 tct 117  Q
    |||    
T  6934 tct 6932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 8716 - 8514
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| ||||||||||||||||||||||||||||||| ||||  | ||||| ||||| |||||||||||| |||||||||||||||| || || | ||||    
T  8716 gaaaatcctctcaatctctttgagccacgtctgagctacatctggatcataccttcctttgaaagtaggaggatgattcctcagaaaagtttccaacatc 8617  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||  || | ||| | ||||||||||| |||||||| ||||| |||||| ||||||| ||| |||| | |||||||||||||||||| || ||| |||| |    
T  8616 ctaacttcggcattagcaccagcattagcattaggctgttgccccacaacttgagccacaacttccaatgcagcagcaatcgcagcgtcattttttccgg 8517  T
Q  226 cca 228  Q
    |||    
T  8516 cca 8514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 83; Significance: 2e-39; HSPs: 4)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 222
Target Start/End: Complemental strand, 194248 - 194038
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||| || |||||||||||||||||||| ||||| ||||||||| |||| ||||||||||| ||  ||||| |||||||||||||||    
T  194248 cactgcatcacacggaagactctctcaatctctttgagccatgtctgggctccatcagggtcgtatcttcccttaaacctaggaggatgattcctcagaa 194149  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| ||||||||||     ||| | || ||||||||||||||||| |||||||| ||| |||||||||  |||| |||||||||||| | |||| |    
T  194148 aagtctcaagcatcctcgacttggcattcgctccagcattcgcattaggctgttgtcctacaacttgagctatggcttgtagtgcagcagctaacgcaac 194049  T
Q  212 atcgtttcttc 222  Q
    ||||| |||||    
T  194048 atcgtctcttc 194038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 16446 - 16230
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| |  |||| |||||| ||||| || ||||||||||| ||||||||  ||||||||||||||||||| || ||| ||||||||||||  |    
T  16446 cactgcatcactcgaaaaatcctctcgatctccttaagccacgtctgggctccatcggggtcatatcttcccttgaaggttggaggatgattcctcatga 16347  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | ||| || |   ||||| |  |||||||||| || ||||||||||| |||||||||||||||||||||| |||||||||||| |  ||| |    
T  16346 aagtctccaacattcttgtctcagcattcacaccagcatttgcgttaggttgttgccccacagcttgagctacagcttgtagtgcagcagctaatgcaac 16247  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  16246 atcgttccttccagcca 16230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 20968 - 20752
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| |  |||| |||||| ||||| || ||||||||||| ||||||||  ||||||||||||||||||| || ||| ||||||||||||  |    
T  20968 cactgcatcactcgaaaaatcctctcgatctccttaagccacgtctgggctccatcggggtcatatcttcccttgaaggttggaggatgattcctcatga 20869  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||  | ||| || |   ||||| |  |||||||||| || ||||||||||| |||||||||||||||||||||| |||||||||||| |  ||| |    
T  20868 aagtctacaacattcttgtctcagcattcacaccagcatttgcgttaggttgttgccccacagcttgagctacagcttgtagtgcagcagctaatgcaac 20769  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  20768 atcgttccttccagcca 20752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 3678 - 3621
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||| ||||| || |||||||||||||| ||||| || ||||| |||||||    
T  3678 acagcttgagcaacagcctcaagtgcagcagcaatagcagcgtcatttctaccagcca 3621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 442590 - 442792
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| |||||||||||||||||||||||||||  | ||||| ||||| |||||||||||  |||||||||||||||| || || | ||||    
T  442590 gaaaatcctctcaacctctttgagccacgtctgagctccatctggatcataccttcctttgaaagtaggtggatgattcctcagaaaagtttccaacatc 442689  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||  || ||||| | |||||| |||| |||||||| ||||| |||||||||||||| ||| |||| | ||||||| |||||||||| || ||||||| ||    
T  442690 ctaacttcagcattagcaccaacattagcattaggctgttgccccacagcttgagccacaacttccaatgcagcaacaatcgcagcgtcatttcttctag 442789  T
Q  226 cca 228  Q
    |||    
T  442790 cca 442792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 167565 - 167468
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    |||||| ||||| | ||| | |||||||||||||||||||||| |||||||||||||| |||| || |||||| |||| || ||  ||||||||||||    
T  167565 acactgaatcactctgaagatcctctcaatctctttgagccacttctgagctccatcagggtcgtaccttcccatgaatgttggtggatgattcctca 167468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 13410 - 13194
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| |||||| |||||||| ||||||||||| ||||||||| ||||||||||||| ||||| || ||| ||||||||||||  |    
T  13410 cactgcatcacacggaaaatcctctctatctctttaagccacgtctgggctccatcagggtcatatcttcctttgaaggttggaggatgattcctcatga 13311  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| |   || || |  ||||||||||||| ||||||||||||||||||||||| || ||| ||| ||| |||||||| |  |||||    
T  13310 acgtctccaacatcctggtctcatcattcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaatgcagc 13211  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  13210 atcgttccttccagcca 13194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 11288 - 11504
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||| ||| | |  ||| |||  |    
T  11288 cactgcataacacggaaaatcctctcaatctctttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttggagggttcttcttcatga 11387  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | ||||||     ||||| | ||||||||||| || ||||||| ||||||||||||||| || ||||||| |||||||||||| | ||||||    
T  11388 aagtctccaacatcctattctcagcattcgcaccagcatttgcgttaggttattgtcccacagcttgggcaacagcttgtagtgcagcagctaacgcagc 11487  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  11488 atcgtttcttccagcca 11504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 81; Significance: 3e-38; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 15348 - 15564
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| ||||||||||||||| |||||||| || ||||||||  ||||||||||||| ||||| || ||| ||||||| ||||  |    
T  15348 cactgcatcacacggaaaatcctctcaatctctttaagccacgtttgggctccatcggggtcatatcttcctttgaaggttggaggatgatttctcatga 15447  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  |||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  15448 aggtctccaacatcctggtctcagcattaacaccagcattagcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 15547  T
Q  212 atcgtttcttccagcca 228  Q
    ||||||  |||||||||    
T  15548 atcgttctttccagcca 15564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 22112 - 22328
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| ||||||||||||||| |||||||| || ||||||||  ||||||||||||| ||||| || ||| ||||||| ||||  |    
T  22112 cactgcatcacacggaaaatcctctcaatctctttaagccacgtttgggctccatcggggtcatatcttcctttgaaggttggaggatgatttctcatga 22211  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  |||||||||| || ||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  22212 aggtctccaacatcctggtctcagcattcacaccagcattagcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 22311  T
Q  212 atcgtttcttccagcca 228  Q
    ||||||  |||||||||    
T  22312 atcgttctttccagcca 22328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 5860 - 6055
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||||||||||||||||||| |||||||||||| | ||||| ||||| ||||| || ||  |||||||||||||||| ||||| | ||||||  ||     
T  5860 ctctcaatctctttgagccacgtatgagctccatcaagatcataccttcctttgaaggtgggtggatgattcctcagaaaagtctccaacatcctaactt 5959  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | ||||||  |||  ||||| | ||||| |||||||||||||| ||| |||| | |||||||||||||||| | ||||||| ||||||||    
T  5960 cagcattagcaccaatattaacattaagctgttgccccacagcttgagccacaacttccaatgcagcagcaatcgcaacgtcgtttcatccagcca 6055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 180081 - 180023
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    ||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  180081 ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaattgcagcatcgtt 180023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 138610 - 138826
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| ||||||| ||||||| ||||||||||| ||||||||  ||||||||||||| |||||||| ||| ||||||| ||||  |    
T  138610 cactgcatcacacggaaaatcctctcagtctctttaagccacgtctgggctccatcggggtcatatcttcctttgaaagttggaggatgatttctcatga 138709  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   || || |  ||||| |||| |||||||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||    
T  138710 aggtctccaacatcctagtctcaacaatcacaccaacatttgcattaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagc 138809  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| || |||||||    
T  138810 atcgttcctcccagcca 138826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 425237 - 425439
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||| ||| | |  ||| |||  || ||||| | ||||    
T  425237 gaaaatcctctcaatctctttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttggagggttcttcttcatgaaagtctccaacatc 425336  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    || |   ||||| | |||||||||||||| ||||||||||||||||||||||| || ||| ||| ||| |||||||| | |||||||||||| |||||||    
T  425337 ctagtctcagcattcgcaccagcattcgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaacgcagcatcgttccttccag 425436  T
Q  226 cca 228  Q
    |||    
T  425437 cca 425439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 34 - 205
Target Start/End: Original strand, 4488 - 4659
Alignment:
Q  34 tctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctac 133  Q
    ||||||||| ||||||||| |||||||||| |||| | |||||||||||||||||||||  | |||||||||||||||| || |||||||||||| || |    
T  4488 tctcaatctatttgagccaagtctgagctctatcaggttcatatcttcccttgaaagtacaaggatgattcctcagaaaagtttctagcatcctcacttc 4587  T
Q  134 agcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaat 205  Q
    |||| |  |||||||||| |||  ||| || ||||||||||||||||| ||| |||| ||||||||||||||    
T  4588 agcattaccaccagcatttgcagcaggctgatgtcccacagcttgagcaacaacttcaagtgcagcagcaat 4659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 18084 - 18300
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||||||   ||||| |||||||||||| || ||||||||||| ||||||||| ||||||||||||| ||||| || ||| ||||||||||||  |    
T  18084 cactgcatcacatggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcatatcttcctttgaaggttggaggatgattcctcatga 18183  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | |||||| |   ||||| |  ||||||||||||| ||||||||||||||||||||||| |  ||| ||| ||| |||||||| | |||| |    
T  18184 atgtctccaacatcctggtctcagcattcacaccagcattcgcgttaggttgttgtcccacagcttgggtaacaacttgtagagcagcagctaacgcaac 18283  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  18284 atcgttccttccagcca 18300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 6930 - 6980
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcata 76  Q
    ||||| |||||||||||| || ||||||||||| ||||||||| |||||||    
T  6930 gaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcata 6980  T

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Target: scaffold0040 (Bit Score: 77; Significance: 7e-36; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 104832 - 104724
Alignment:
Q  120 agcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttc 219  Q
    ||||||||| || ||||| ||||||||||| | |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  104832 agcatcctcacttcagcatttgcaccagcacttgcattaggctgatgtcccacagcttgagctacagcttctagtacagcagcaatcgcagcatcgtttc 104733  T
Q  220 ttccagcca 228  Q
    |||||||||    
T  104732 ttccagcca 104724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 224
Target Start/End: Original strand, 21123 - 21269
Alignment:
Q  78 cttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagctt 177  Q
    ||||| |||||||||||  |||||||||||| |||  |||| | ||| ||  || ||||| | |||||||||||||||||||| ||||||||||||||||    
T  21123 cttcctttgaaagtaggtggatgattcctcataaaattctccaacattctaacttcagcattagcaccagcattcgcattaggctgttgtcccacagctt 21222  T
Q  178 gagctacagcttctagtgcagcagcaatcgcagcatcgtttcttcca 224  Q
    |||  |||||||| | |||||||| ||| ||||| || |||||||||    
T  21223 gagtcacagcttccaatgcagcagtaatagcagcgtcatttcttcca 21269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 18783 - 18830
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtc 73  Q
    |||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  18783 gaaaactctctcaatctctttgagccacgtctgtgctccatcagggtc 18830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 229232 - 229016
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| |  |||| ||| || ||||| || ||||||||||| ||||||||| |||||||||||||  ||||||| ||| ||||||||||||  |    
T  229232 cactgcatcactcgaaaaatcctttcgatctccttaagccacgtctgggctccatcagggtcatatcttcctgtgaaagttggaggatgattcctcatga 229133  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |    |||| |  ||||||||||||| ||||||||||||||||||||||| || ||| ||| ||| |||||||| | ||||||    
T  229132 aggtctccaacatcctggtcttagcattcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagctaacgcagc 229033  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  229032 atcgttccttccagcca 229016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 20079 - 20194
Alignment:
Q  71 gtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtccc 170  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||   ||||| | ||||||||||| |||||||| |||||||||    
T  20079 gtcatatcttcccttgaaagtaggaggatgattcctcaggaaggtctctagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtccc 20178  T
Q  171 acagcttgagctacag 186  Q
    ||| ||||||||||||    
T  20179 acaacttgagctacag 20194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 12387 - 12589
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||| ||| | |  ||| |||  || ||||| | ||||    
T  12387 gaaaatcctctcaatctctttaagccacgtctgggctccatcagggtcatatcttcctttgaaagttggagggttcttcttcatgaaagtctccaacatc 12486  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||     ||||| | ||||||||||| || ||||||||||||||||||||||  || ||||||| |||||||||||| | |||| |||||||||||||||    
T  12487 ctattctcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttaggcaacagcttgtagtgcagcagctaacgcatcatcgtttcttccag 12586  T
Q  226 cca 228  Q
    |||    
T  12587 cca 12589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 55925 - 56141
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc-aga 110  Q
    ||||||||||| | ||| | |||||| |||||||| ||||||||||| ||||||||  |||||||||| |||||||| || ||| | |  |||||| |||    
T  55925 cactgcatcacacggaagatcctctctatctctttaagccacgtctgggctccatccgggtcatatctccccttgaaggttggagggttcttcctcgaga 56024  T
Q  111 aaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcag 210  Q
    ||| |||| | |||||||    ||||| |||||||||||||||| || |||||||||||||||||||| || ||||||| ||  |||||||| | ||||     
T  56025 aag-tctccaacatcctcatctcagcatttgcaccagcattcgcgttgggttgttgtcccacagcttgggcaacagcttgtaaagcagcagctaacgcaa 56123  T
Q  211 catcgtttcttccagcca 228  Q
    ||||||||||||||||||    
T  56124 catcgtttcttccagcca 56141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 21901 - 22117
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||||||||||| ||||||||||| |||| |||| ||||||||||||| |||||||| ||| | |  ||| |||  |    
T  21901 cactgcataacacggaaaatcctctcaatctctttaagccacgtctgggctcgatcagggtcatatcttcctttgaaagttggagggttcttcttcatga 22000  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | ||||||     ||||| | ||||||||||| || ||||||||||||||||||||||| || ||| ||| |||||||||||| | |||| |    
T  22001 aagtctccaacatcctattctcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagtgcagcagctaacgcatc 22100  T
Q  212 atcgtttcttccagcca 228  Q
    ||| |||||||||||||    
T  22101 atcatttcttccagcca 22117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 555 - 751
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| |||||||||||||||||||||||| ||||||||||| | ||||||||||| || ||||||||  |||||||||||| ||||||||| | ||||    
T  555 gaaaactctctcaatctctttgagccacgtccgagctccatcaggatcatatcttcctttaaaagtaggtggatgattcctcaaaaaggtctccaacatc 654  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||  || |  |||  ||||||      ||||||||||||||  ||||||||||||| ||| |||| | |||||||||||  ||||| |||||||||||||    
T  655 ctaacttctccacccgcacca------gcattaggttgttgctccacagcttgagccacaacttccaatgcagcagcaagagcagcgtcgtttcttccag 748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 228
Target Start/End: Original strand, 3780 - 3995
Alignment:
Q  13 actgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaa 112  Q
    |||||||||| | ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||| || ||| |||||||||| |  ||    
T  3780 actgcatcacacggaaaatcctctcaatctctttgagccacgtctgggctccatcagggtcatatcttcctttgaaggttggaggatgattccttatgaa 3879  T
Q  113 ggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagca 212  Q
     ||||| | || ||| |   || || |  ||||||||||||| ||||||||||||||||||||||| |  ||||||| ||| |||| ||| | || ||||    
T  3880 agtctccaacaacctagtctcatcattcacaccagcattcgcgttaggttgttgtcccacagcttgggaaacagcttgtagagcagaagctaacgaagca 3979  T
Q  213 tcgtttcttccagcca 228  Q
    || || ||||||||||    
T  3980 tcattacttccagcca 3995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 7050 - 7150
Alignment:
Q  27 aaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcc 126  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  |||||||||||| ||||||||| | |||||    
T  7050 aaaatcctctcaatctctttgagccacgtctgagctccatcagggtcataccttcccttgaaagtaggtggatgattcctcaaaaaggtctccaacatcc 7149  T
Q  127 t 127  Q
    |    
T  7150 t 7150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 71046 - 71245
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| ||||||||||||| |||||||||||||| ||||||| || || ||||| || ||  |||| ||||||||||||||||| | ||||    
T  71046 gaaaatcctctcaacctctttgagccacttctgagctccatcagggtcatacctccctttgaatgttggtggatggttcctcagaaaggtctccaacatc 71145  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||| |  || || |   |||||||   ||||| ||||||||||| ||||||| ||| ||||| || |||||||||||||| |||||||||||||| ||||    
T  71146 ctcacaccatcatt---accagcagcagcattcggttgttgtcctacagcttaagcaacagcctcaagtgcagcagcaatagcagcatcgtttctcccag 71242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 228
Target Start/End: Original strand, 868 - 1069
Alignment:
Q  27 aaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcc 126  Q
    ||||| || |||||||| |||||||||||||| ||||| ||  | ||||| ||||| ||||||  |||| |||| ||||||||||| ||||||| ||| |    
T  868 aaaactctttcaatctccttgagccacgtctgtgctccgtctggatcataccttcctttgaaaacaggaggatggttcctcagaaaagtctctaacattc 967  T
Q  127 tcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagc 226  Q
    |  |  ||||| | |||||| |||| |||||  | |||||||| ||| || |||||||| | ||||  ||||||||||| |||||||| || ||||||||    
T  968 tgacctcagcattcgcaccaacattagcattttgctgttgtcctacaactcgagctacatcatctaacgcagcagcaatagcagcatcattccttccagc 1067  T
Q  227 ca 228  Q
    ||    
T  1068 ca 1069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 15882 - 15767
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||||||||||||||| || |||||||| ||| ||     
T  15882 ctctctatctctttgagccacgtctgagctccatcggggtcatatcttcccttaaaagtaggaggatgattcctcagaaaagtttctagcattctcactt 15783  T
Q  133 cagcacttgcaccagc 148  Q
    ||||| | ||||||||    
T  15782 cagcattagcaccagc 15767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 15770 - 15714
Alignment:
Q  172 cagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||| |||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  15770 cagcttaagctacagcttctagtgcagcagcgatcgcaacattgtttcttccagcca 15714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 27 - 228
Target Start/End: Original strand, 727 - 922
Alignment:
Q  27 aaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcc 126  Q
    |||| |||||| ||||| || |||||||| || ||||||||| |||| ||||||||||||||||||||| ||||||||||||  || ||||| | |||||    
T  727 aaaatcctctcgatctccttaagccacgtttgggctccatcagggtcgtatcttcccttgaaagtaggaggatgattcctcatgaaagtctcaaccatcc 826  T
Q  127 tcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagc 226  Q
    |||   ||||| |  |||||      |||||||| || ||||| | |||||| |||||||  |||||||| |||||||||||||||||||||||||||||    
T  827 tcgtctcagcattcacacca------gcattaggctgatgtccaatagcttgtgctacagtctctagtgcggcagcaatcgcagcatcgtttcttccagc 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 35574 - 35391
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||| |||||||||||| |||  |||||| ||||||| ||     
T  35574 ctctcaatctctttgagccacgtctgagctccatcagggtcgtatcttcctttgaaagtaggaggatgattcctcataaaattctctaacatcctcactt 35475  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | || ||| ||||  ||||||| || ||  ||            ||||||||||||||||||||||||||||  ||||||||||||||||    
T  35474 cagcattagctccaacattaacattaggctgatgctcc------------acagcttctagtgcagcagcaatcgcagtgtcgtttcttccagcca 35391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 213
Target Start/End: Original strand, 49586 - 49787
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc-aga 110  Q
    ||||||||||| | ||| | |||||| |||||||| ||||||||||| ||||||||  ||||||||||||||||||| || ||| | |  |||||| |||    
T  49586 cactgcatcacacggaagatcctctctatctctttaagccacgtctgggctccatccgggtcatatcttcccttgaaggttggagggttcttcctcgaga 49685  T
Q  111 aaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcag 210  Q
    ||| | || | ||||||||   ||||| |||||||||||||||| ||||||||||||||||||||||| || ||||||| | | |||||||| | |||||    
T  49686 aag-tgtccaacatcctcgtctcagcatttgcaccagcattcgctttaggttgttgtcccacagcttgggcaacagcttgtcgagcagcagctaacgcag 49784  T
Q  211 cat 213  Q
    |||    
T  49785 cat 49787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 226
Target Start/End: Complemental strand, 162374 - 162174
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    |||||| || |||||||| || ||||||||||| |||||  |  | ||||| ||||| ||||||  |||  |||| ||||||| ||| ||||||| | |     
T  162374 gaaaactctttcaatctccttcagccacgtctgtgctccgcctagatcataccttcctttgaaaacagggggatggttcctcaaaaaagtctctaacgtt 162275  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    || ||  ||||| | |||||| |||| |||||  |||||||||| |||||| |||||| ||| || |  ||||||||||| ||| |||| || |||||||    
T  162274 ctagcctcagcattcgcaccaacattagcattttgttgttgtcctacagctcgagctatagcatccaacgcagcagcaatagcatcatcattccttccag 162175  T
Q  226 c 226  Q
    |    
T  162174 c 162174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 228
Target Start/End: Original strand, 8505 - 8697
Alignment:
Q  36 tcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacag 135  Q
    |||| ||| ||||||||| |||||||||||||| | |||||||| || |||||||| ||  | ||||| |||| ||| || |||| ||||||  || |||    
T  8505 tcaacctccttgagccacttctgagctccatcaggatcatatctacctttgaaagttggtgggtgatttctcataaaagtttctaacatcctaacttcag 8604  T
Q  136 cacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    || |||||||||||    |||| |||||||| || ||||||||||||||||| || |||||||||||||| |||||||| |||||| ||||||    
T  8605 catttgcaccagcaccaacatttggttgttgccctacagcttgagctacagcctcaagtgcagcagcaatagcagcatcatttctttcagcca 8697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 42076 - 42292
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||  |||||||| ||| | |  ||| |||  |    
T  42076 cactgcataacccggaaaatcctctcaatctctttaagccacgtctgggctccatcagggtcatatcttcgtttgaaagttggagggttcttcttcatga 42175  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| | ||| || |   ||||| | ||||||||||| || |||||||||| |||||||||||| || ||| ||| ||| |||||||| | |||| |    
T  42176 aagtctccaacattctagtctcagcattcgcaccagcatttgcgttaggttgttatcccacagcttgggcaacaacttgtagagcagcagctaacgcaac 42275  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  42276 atcgtttcttccagcca 42292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 12351 - 12296
Alignment:
Q  173 agcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  12351 agcttgtgctacagtctctagtgcagcagcaatcgcagcgtcgtttcttccagcca 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 12504 - 12427
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaa 89  Q
    |||||||||||   ||||| |||||| ||||| ||  |||||||||| | ||||||| ||||||||||||| ||||||    
T  12504 cactgcatcacatggaaaatcctctctatctccttatgccacgtctgggatccatcagggtcatatcttcctttgaaa 12427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 228
Target Start/End: Original strand, 37440 - 37578
Alignment:
Q  90 gtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagctt 189  Q
    |||||| ||||||||||||  || ||||| ||||||||||   ||||| |  ||||| ||||||||||||||| ||| ||||||||||||||||| ||||    
T  37440 gtaggaggatgattcctcatgaaagtctcgagcatcctcgtctcagcattcacaccaacattcgcattaggttattgccccacagcttgagctacggctt 37539  T
Q  190 ctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     |||| ||||||| | |||||||||||||||||||||||    
T  37540 gtagttcagcagctaacgcagcatcgtttcttccagcca 37578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 1027 - 1237
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| |  ||||| ||||||||||| || ||||||||| | ||||||||  | ||||||||| ||||||| |||||| ||||||||||||  |    
T  1027 cactgcatcacacgaaaaactctctcaatctccttaagccacgtccgggctccatctggatcatatctttccttgaaggtaggaggatgattcctcatga 1126  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    | ||||| ||||||||||   ||||| |  | |||      |||||||| || ||||| | |||||| ||||||| |||||||||||||||||||||| |    
T  1127 atgtctcaagcatcctcgtctcagcattcacccca------gcattaggctgatgtccaatagcttgtgctacagtttctagtgcagcagcaatcgcatc 1220  T
Q  212 atcgtttcttccagcca 228  Q
    |||||| ||||||||||    
T  1221 atcgttccttccagcca 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 14421 - 14211
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| |||||| ||||| || ||||||||||  ||||||||| |||||| |||||| ||||| || ||| ||||||||||||  |    
T  14421 cactgcatcacacggaaaatcctctcgatctccttaagccacgtctaggctccatcagggtcatgtcttcctttgaaggttggaggatgattcctcatga 14322  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | |||||| |   ||||| |  ||| ||||||      ||| || ||||| | |||||| |||||||  |||||||||||||||||||||||    
T  14321 aggtctccaacatccttgtctcagcattcacactagcatt------aggctgatgtccaatagcttgtgctacagtctctagtgcagcagcaatcgcagc 14228  T
Q  212 atcgtttcttccagcca 228  Q
    |||||||||||||||||    
T  14227 atcgtttcttccagcca 14211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 13624 - 13480
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||||||||||||| || |||||||||| | ||||||| ||||| || ||||||||  |||||||||| ||||| ||||| | ||||||  ||     
T  13624 ctctcaatctctttgagccatgtttgagctccattagggtcataccttcctttaaaagtaggtggatgattccttagaaaagtctccaacatcctatctt 13525  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagctt 177  Q
    ||||| | ||||||||||| |||||||||||||| |||| |||||    
T  13524 cagcattagcaccagcattagcattaggttgttgccccaaagctt 13480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 228
Target Start/End: Complemental strand, 13475 - 13441
Alignment:
Q  194 tgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||||||| ||||||||||||||||    
T  13475 tgcagcagcaatcgcagcgtcgtttcttccagcca 13441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 16875 - 17074
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||||||||| || || ||||| || ||  |||| || |||||||||||||| | ||||    
T  16875 gaaaatcctctcaacctctttgagccacttctgagctccatcatggtcatacctccctttgaatgttggtggatggtttctcagaaaggtctccaacatc 16974  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||| |  || || |   |||||||   ||||| ||||||||||  ||||||||||| ||||| || ||||||||||||||  ||||||| ||||| ||||    
T  16975 ctcacaccatcatt---accagcaccagcattcggttgttgtcatacagcttgagcaacagcctcaagtgcagcagcaataacagcatcatttctcccag 17071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 22892 - 22697
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    |||||||||| |||||||||||||| |||||||| | ||||||| ||||| |||||||||||  ||||||||||||  ||  | || | ||||||  |      
T  22892 ctctcaatctatttgagccacgtctaagctccattagggtcataccttcctttgaaagtaggcggatgattcctcaagaaattttccaacatcctaacct 22793  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| | |||||| |||| |||||||| || || || ||||||| ||| ||| |||| | |||||||||||| ||||| ||||||||||||||||    
T  22792 cagcattagcaccaacattagcattaggctgatgccctacagctttagccacaacttccaatgcagcagcaattgcagcgtcgtttcttccagcca 22697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 5758 - 5832
Alignment:
Q  101 attcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagc 175  Q
    |||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||||||    
T  5758 attcctcagaaaagtctctagcatcctcgcttcagcacttgcaccatcattcgcattaggctgttgccccacagc 5832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 228
Target Start/End: Complemental strand, 17709 - 17523
Alignment:
Q  42 tctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttg 141  Q
    ||||||||||||||||||||||||||| | ||||  ||||||||||||| |||  || ||||||||||||| || || | ||||||  || |  || | |    
T  17709 tctttgagccacgtctgagctccatcaggatcatgccttcccttgaaagcaggtggacgattcctcagaaaagtttccaacatcctaactccgtcattag 17610  T
Q  142 caccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    | ||||||   |||||||| ||||| |||||||||||||||||| |||| | ||||||||||||  || |||| || ||||||||||    
T  17609 cgccagcaccagcattaggctgttgccccacagcttgagctacaacttccaatgcagcagcaataacaacatcattccttccagcca 17523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0656 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 224
Target Start/End: Original strand, 231 - 437
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||| |||||| | ||||| |||||| ||||| || ||||||||||| ||||||||| ||||||||||||| ||||||   ||| | ||||||||||  |    
T  231 cactacatcacccggaaaatcctctctatctccttaagccacgtctgggctccatcagggtcatatcttcctttgaaaactggagggtgattcctcatga 330  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| |||||||| |   ||||| |  |||||      |||||||| || | ||| | |||||| |||||||  |||||||||||||||||||||||    
T  331 aggtctccagcatcctagtctcagcagtcacacca------gcattaggctgatatccaatagcttgcgctacagtctctagtgcagcagcaatcgcagc 424  T
Q  212 atcgtttcttcca 224  Q
     ||||||||||||    
T  425 gtcgtttcttcca 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 228
Target Start/End: Complemental strand, 14368 - 14167
Alignment:
Q  27 aaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcc 126  Q
    |||| ||||| |||||||||||||||| |||||||||||||  | ||||| ||||| ||||||||||   |||||||||||| ||| || || | ||| |    
T  14368 aaaatcctcttaatctctttgagccacatctgagctccatctggatcataccttcctttgaaagtagatggatgattcctcataaaagtttccaacattc 14269  T
Q  127 tcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagc 226  Q
    |  |  ||||| | |||||||||   |||||||| | ||| |||||||||||||| | | |||| |  ||||||||||||||||| || |||||||||||    
T  14268 taacctcagcattagcaccagcaccagcattaggctattgccccacagcttgagccagaacttccaaagcagcagcaatcgcagcgtcatttcttccagc 14169  T
Q  227 ca 228  Q
    ||    
T  14168 ca 14167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 72 - 228
Target Start/End: Original strand, 33543 - 33699
Alignment:
Q  72 tcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtccca 171  Q
    |||||||| || |||||||| ||  ||||||| |||||||| || || | || |||| || || || ||||||||||| | ||||| ||||||||||| |    
T  33543 tcatatctacctttgaaagttggtggatgatttctcagaaaagtttccaacaacctcactccatcatttgcaccagcactagcattcggttgttgtccta 33642  T
Q  172 cagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||| |||||||||||||  |||||| ||||||| ||| |||||||||| |||||||    
T  33643 cagcctgagctacagcttgcagtgcaacagcaatagcaacatcgtttctcccagcca 33699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 1065 - 1180
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| ||||||||| | ||| ||||||||||| ||||||||| ||||||||||||| ||||| || ||| ||||||||||||  |    
T  1065 cactgcatcacacggaaaatcctctcaatatatttaagccacgtctgggctccatcagggtcatatcttcctttgaaggttggaggatgattcctcatga 1164  T
Q  112 aggtctctagcatcct 127  Q
    ||||||| | ||||||    
T  1165 aggtctccaacatcct 1180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 1186 - 1269
Alignment:
Q  145 cagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| | |||||||||||||||| |||||| || ||||||| ||| | |||||| | |||| |||| || ||||||||||    
T  1186 cagcattcacgttaggttgttgtcccagagcttgggcaacagcttgtagagtagcagctaacgcaacatcattccttccagcca 1269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 3886 - 3964
Alignment:
Q  42 tctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctcta 120  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||  |||||||||||| ||| |||||||    
T  3886 tctttgagccacgtctgagctccatcagggtcataccttcctttgaaagtaggtggatgattcctcataaaagtctcta 3964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 62152 - 61939
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| |||| ||| ||| ||||||||| |||||||||| ||| ||||||| || || ||||| || ||  |||| ||||||||||    
T  62152 cactgcatgactctgaaaatcctcacaacctccttgagccacttctgagctccgtcagggtcatacctccctttgaatgttggtggatggttcctcagaa 62053  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | ||||||  || ||  | |   |||||||    |||| |||||||||   ||||||||||||||||| || |||||||||||||| |||||    
T  62052 aggtctccaacatccttactccattatt---accagcaccaacattcggttgttgttgtacagcttgagctacagcctcaagtgcagcagcaatagcagc 61956  T
Q  212 atcgtttcttccagcca 228  Q
    ||||||||| |||||||    
T  61955 atcgtttctcccagcca 61939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 64555 - 64500
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    ||||| |||||||||||||| ||||| || ||||||||||||||| || |||||||    
T  64555 tgttggcccacagcttgagcaacagcctcaagtgcagcagcaatcacaacatcgtt 64500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 33 - 220
Target Start/End: Complemental strand, 343 - 159
Alignment:
Q  33 ctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgcta 132  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||| || || ||||  || ||  |||| || |||||||||||||| | ||||||| |      
T  343 ctctcaacctccttgagccacttctgagctccatcagggtcatacctccctttgattgttggtggatggtttctcagaaaggtctccaacatcctcacac 244  T
Q  133 cagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttct 220  Q
    || || |   |||||||   ||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||||| |||||    
T  243 catcatt---accagcaccagcattcggttgttgtcctacagcttgagccacagcctcaagtgcagcagcaatagcagcatcatttct 159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 28235 - 28155
Alignment:
Q  148 cattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||| ||||||||||||||||||||||| || ||||||| ||| |||||||| | |||||||||||| ||||||||||    
T  28235 cattcgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaacgcagcatcgttccttccagcca 28155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 150 - 35
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| |||||| ||||| || ||||||||||| ||||||||| ||||||||||||| ||||| || ||| ||||||| ||||  |    
T  150 cactgcatcacacggaaaatcctctcgatctccttaagccacgtctgggctccatcagggtcatatcttcctttgaatgttggaggatgatttctcatga 51  T
Q  112 aggtctctagcatcct 127  Q
    ||||||| | ||||||    
T  50 aggtctccaacatcct 35  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 1005 - 1088
Alignment:
Q  36 tcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctct 119  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||| ||||||||||   |||||||||||| ||| ||||||    
T  1005 tcaacctctttgagccacgtctcagctccatcatggtcataccttcctttgaaagtagatggatgattcctcataaaagtctct 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 1117 - 1188
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttcca 224  Q
    |||||||| |||||||||||| ||||| | ||| |||| | |||||||||||| ||||| || |||||||||    
T  1117 gcattaggctgttgtcccacaacttgaaccacaacttccaatgcagcagcaatagcagcgtcatttcttcca 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 26835 - 26970
Alignment:
Q  42 tctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttg 141  Q
    ||||||||||||| ||||||||||||  ||||||| ||||| |||||||||||| |||||||||||||||| || || | ||||||  || || || | |    
T  26835 tctttgagccacgactgagctccatctgggtcataccttcctttgaaagtaggaggatgattcctcagaaaagtttccaacatcctaacttcaccattag 26934  T
Q  142 caccagcattcgcattaggttgttgtcccacagctt 177  Q
    ||||| ||    ||||||||||||| ||||||||||    
T  26935 caccaacaccaacattaggttgttgccccacagctt 26970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 7159 - 7044
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||| | |||||||||||| || ||||||||||| ||||| ||| ||||||||||||| |||||||| ||| ||||||| ||||  |    
T  7159 cactgcatcacacggaatatcctctcaatctccttaagccacgtctgggctccgtcagggtcatatcttcctttgaaagttggaggatgatttctcatga 7060  T
Q  112 aggtctctagcatcct 127  Q
    ||||||| | ||||||    
T  7059 aggtctccaacatcct 7044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 172043 - 172158
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| ||| |||||||| || ||||||||||| ||||||||  |||||||||||||||||||||| ||| | ||||| ||||  |    
T  172043 cactgcatcacacggaaaatcctatcaatctccttaagccacgtctgggctccatcggggtcatatcttcccttgaaagttggagggtgatttctcatga 172142  T
Q  112 aggtctctagcatcct 127  Q
    ||||||| | ||||||    
T  172143 aggtctccaacatcct 172158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 4392 - 4294
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcag 109  Q
    ||||||||| || | ||| | |||||||||||||||||||||| |||||||||||||| |||| || ||||||||||| || ||  |||||||||||||    
T  4392 acactgcataactctgaagatcctctcaatctctttgagccacttctgagctccatcagggtcgtaccttcccttgaatgttggtggatgattcctcag 4294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 4244 - 4178
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| ||||||||||| |||||||  |||||| ||||||| ||||||||||| ||||||||||    
T  4244 tgttgtcctacagcttgagccacagcttgcagtgcaacagcaatagcagcatcgttccttccagcca 4178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 186
Target Start/End: Original strand, 1740 - 1894
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgct 131  Q
    |||||||| ||||||||||||| |||||||||| ||| | || |||||||| |||||||| ||  ||||||| |||||||| || || | || |||| ||    
T  1740 cctctcaacctctttgagccacttctgagctccgtcaggatcgtatcttcctttgaaagttggtggatgatttctcagaaatgtttccaacaacctcact 1839  T
Q  132 acagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacag 186  Q
     || || |||||||||||   ||||| |  |||||||| ||||||||||||||||    
T  1840 ccatcatttgcaccagcaccagcattcgactgttgtcctacagcttgagctacag 1894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 4494 - 4540
Alignment:
Q  182 tacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  4494 tacagcttcaagtgcagcagcaatagcagcatcgtttcttccagcca 4540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 17575 - 17771
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| ||||||||  || ||||||||| |||||||||||||| ||||||| || || ||||| || ||  |||| ||||||| ||| ||||| | ||||    
T  17575 gaaaatcctctcaacttccttgagccacttctgagctccatcagggtcatacctccctttgaatgttggtggatggttcctcataaatgtctccaacatc 17674  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||| |  || || |   |||||||   ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| | |||||||||||| ||||    
T  17675 ctcacaccatcatt---accagca---gcattcggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaatagtagcatcgtttctcccag 17768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 5922 - 6078
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    ||||||||||| | ||||| ||||||||||| ||| ||||||||||| |||||||   ||||||||||||| || || || ||||||||||| ||||  |    
T  5922 cactgcatcacacggaaaatcctctcaatct-tttaagccacgtctgggctccattggggtcatatcttcctttaaaggttggatgatgatttctcatga 6020  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcc 169  Q
    ||||||| | |||||| |   ||||| |   |||||||||||| ||||||||||||||    
T  6021 aggtctccaacatcctggtctcagcattcagaccagcattcgcgttaggttgttgtcc 6078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 778 - 702
Alignment:
Q  36 tcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaa 112  Q
    |||||||||||||||||||  | |||||||||| |||||||||||||||||||||||||  ||||| | ||||||||    
T  778 tcaatctctttgagccacgattaagctccatcagggtcatatcttcccttgaaagtaggtggatgacttctcagaaa 702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 228
Target Start/End: Complemental strand, 11261 - 11081
Alignment:
Q  42 tctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatga-tgattcctcagaaaggtctctagcatcctcgctacagcactt 140  Q
    ||||||||||||||||||||||||||| | ||||| |||||||| |||||||| ||| |||||||||||||| || |||| ||||||  || |   | |     
T  11261 tctttgagccacgtctgagctccatcaggatcataccttccctttaaagtagg-tgattgattcctcagaaaagtttctaacatcctaactccgttatta 11163  T
Q  141 gcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     |||||      |||||||||||||| || ||||||||||| |||||||| |  || |||||||| |||||||| || ||||||||||    
T  11162 ccacca------gcattaggttgttgccctacagcttgagccacagcttccaacgcggcagcaatagcagcatcattccttccagcca 11081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 1825 - 1750
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||||| ||||| |||||||    
T  1825 gcattcggttgttgtcctacagcttgagccacagcctcaagtgcagcagcaatagcagcatcatttctcccagcca 1750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 1949 - 1832
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcaga 110  Q
    |||||||||||| | ||| || ||||||| ||| ||||||||| |||||||||||||| ||||||| || ||  |||| || ||  |||| || ||||||    
T  1949 acactgcatcaccctgaagactctctcaacctccttgagccacttctgagctccatcagggtcatacctcccagtgaatgttggtggatggtttctcaga 1850  T
Q  111 aaggtctctagcatcctc 128  Q
    |||||||| | |||||||    
T  1849 aaggtctccaacatcctc 1832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 159 - 5
Alignment:
Q  48 agccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccag 147  Q
    |||||| |||||||||||||  ||||||| ||||| ||||| || ||  |||||||||||| ||||||||| | ||||||| || || |  |   |||||    
T  159 agccacttctgagctccatcggggtcataccttcctttgaatgttggtggatgattcctcaaaaaggtctccaacatcctcactccatcgtt---accag 63  T
Q  148 cattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaat 205  Q
    ||   ||||| ||||||||||| ||||||||||| ||||| || ||||||||||||||    
T  62 caccagcattcggttgttgtcctacagcttgagcaacagcctcaagtgcagcagcaat 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 4379 - 4454
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| || |||||||| ||||||||||||||| | || |||||||||||||| |||||||||||||| |||||||    
T  4379 gcattcggctgttgtcctacagcttgagctacaacctcaagtgcagcagcaatagcagcatcgtttctcccagcca 4454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 43952 - 43877
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||||| |||||||    
T  43952 gcattcggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcagcatcgtttctcccagcca 43877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 6118 - 6314
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| ||||||||||||| |||||||||||||| ||||||| || || ||||  || ||  |||| || ||||| || ||||| | ||||    
T  6118 gaaaatcctctcaacctctttgagccacttctgagctccatcagggtcatacctccctttgattgttggtggatggtttctcaggaaagtctccaacatc 6217  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||| |  ||||| |   |||||||   ||||||||||| ||||  ||||||||||| ||||| || ||||||||| |||| |||||||  ||||| ||||    
T  6218 ctcacaccagcatt---accagca---gcattaggttgctgtcgtacagcttgagcaacagcctcaagtgcagcaacaatagcagcataatttctaccag 6311  T

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Target: scaffold0243 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 23481 - 23360
Alignment:
Q  106 tcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaat 205  Q
    ||||||| ||||||||| |||||  | ||||| | |  ||| |||| ||||| ||||||||||||||||||||||| ||  ||| |||||||||||| |     
T  23481 tcagaaaagtctctagcttcctcatttcagcattagtcccaacatttgcatt-ggttgttgtcccacagcttgagccacgacttgtagtgcagcagctaa 23383  T
Q  206 cgcagcatcgtttcttccagcca 228  Q
    |||||| ||||||||||||||||    
T  23382 cgcagcttcgtttcttccagcca 23360  T

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Target: scaffold0505 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 2704 - 2789
Alignment:
Q  42 tctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcct 127  Q
    ||||||||||||| ||||||||||||  | ||||| ||||| |||||||||||  |||||||||||||||| ||||| | ||||||    
T  2704 tctttgagccacgactgagctccatctggatcataccttcctttgaaagtaggtggatgattcctcagaaaagtctccaacatcct 2789  T

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Target: scaffold0348 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 16433 - 16376
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  16433 acagcttgagctacagcctcaagtgcagcagcaatagcagcatcgtttctaccagcca 16376  T

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Target: scaffold0058 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 23202 - 23259
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  23202 acagcttgagctacagcctcaagtgcagcagcaatagcagcatcgtttctaccagcca 23259  T

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Target: scaffold0055 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 23168 - 23317
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||||||||||| ||||||||||| ||||||||| ||||||| | |||  ||||||| ||| | |  ||| |||  |    
T  23168 cactgcataactcggaaaatcctctcaatctctttaagccacgtctgggctccatcagggtcataacgtcctctgaaagtcggagggttcttcttcatga 23267  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggt 161  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||    
T  23268 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggt 23317  T

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Target: scaffold0052 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 8157 - 8306
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | ||||| ||||||||||||||| ||||||||||| ||||||||| ||||||| | |||  ||||||| ||| | |  ||| |||  |    
T  8157 cactgcataactcggaaaatcctctcaatctctttaagccacgtctgggctccatcagggtcataacgtcctctgaaagtcggagggttcttcttcatga 8256  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggt 161  Q
    | ||||| | |||||| ||| ||||| |||||||||||||| | ||||||    
T  8257 acgtctccaacatcctagcttcagcatttgcaccagcattcacgttaggt 8306  T

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Target: scaffold0529 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 228
Target Start/End: Original strand, 6064 - 6236
Alignment:
Q  56 ctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccagcattcgca 155  Q
    ||||||||||||  | ||||| ||||| ||||||||||   |||||||||||||||| || || | ||||||  || || || | |||||||||   |||    
T  6064 ctgagctccatctggatcataccttcctttgaaagtagatggatgattcctcagaaaagtttccaacatcctaacttcaccattagcaccagcaccagca 6163  T
Q  156 ttaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||  |||||||||||||| | | |||| | ||||||| |||| ||||| || |||||||||||||    
T  6164 ttaggctgtttccccacagcttgagccataacttccaatgcagcaacaatagcagcgtcatttcttccagcca 6236  T

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Target: scaffold0026 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 52590 - 52789
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| ||||| || ||||||||||||| |||||||| ||| | ||| ||| || || ||||| || ||  |||| || |||||||||||||| | ||||    
T  52590 gaaaatcctctaaacctctttgagccacttctgagctgcattagggttatacctccctttgaatgttggtggatggtttctcagaaaggtctccaacatc 52689  T
Q  126 ctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccag 225  Q
    ||| |  || || |   |||||||   ||||| ||||| ||||| ||||||||||| ||||| || ||||||| |||||| |||||||| ||||| ||||    
T  52690 ctcacaccatcatt---accagcaccagcattcggttgctgtcctacagcttgagcaacagcctcaagtgcagtagcaatagcagcatcatttctaccag 52786  T

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Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 320203 - 320366
Alignment:
Q  48 agccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcacttgcaccag 147  Q
    |||||| |||| || |||||| | ||||| ||||| ||||| |  ||  |||||||||||| ||||||||| ||||||||| || || |  |  || |||    
T  320203 agccacttctgggcaccatcaggatcataccttcctttgaatgctggtggatgattcctcaaaaaggtctccagcatcctcacttcaccgttaccagcag 320302  T
Q  148 cattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||   || || ||||||||||||||||||||||| ||||| || |||||||||||||| ||||||||    
T  320303 ca---gcgttcggttgttgtcccacagcttgagcaacagcctcaagtgcagcagcaatagcagcatc 320366  T

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Target: scaffold0546 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 956 - 1011
Alignment:
Q  173 agcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  956 agcttgtgctacagtctctagtgcagcagcaatcgcagcgtcgtttcttccagcca 1011  T

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Target: scaffold0546; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 803 - 880
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaa 89  Q
    |||||||||||   ||||| |||||| ||||| ||  |||||||||| | ||||||| ||||||||||||| ||||||    
T  803 cactgcatcacatggaaaatcctctctatctccttatgccacgtctgggatccatcagggtcatatcttcctttgaaa 880  T

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Target: scaffold0056 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 125 - 50
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||| ||||| ||||||||||| ||||| || ||||||||||||||||||| ||| ||||| |||||||    
T  125 gcattcggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaatcgcagtatcatttctaccagcca 50  T

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Target: scaffold0586 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 635 - 701
Alignment:
Q  162 tgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||| ||||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||    
T  635 tgttgtcctacagcttgagctacagcctcaagcgcagcagcaatagcagcatcatttctcccagcca 701  T

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Target: scaffold0149 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 28981 - 28935
Alignment:
Q  182 tacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  28981 tacagcttcaagtgcagcagcaatagcagcatcgtttcttccagcca 28935  T

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Target: scaffold2062 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 114 - 53
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||| ||||| ||||| ||||||||||| |||||||| |||||||||||||| ||||||||    
T  114 gcattcggttgctgtcctacagcttgagcaacagcttcaagtgcagcagcaatagcagcatc 53  T

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Target: scaffold0523 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 6375 - 6476
Alignment:
Q  26 gaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatc 125  Q
    ||||| |||||||| ||||||||||||  |||||||||||||| || |||| || || ||||| || ||  |||||||||||| ||||||||| | ||||    
T  6375 gaaaatcctctcaacctctttgagccatttctgagctccatcagggccatacctccctttgaatgttggtggatgattcctcaaaaaggtctccaacatc 6474  T
Q  126 ct 127  Q
    ||    
T  6475 ct 6476  T

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Target: scaffold0434 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 5138 - 5069
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||| ||||||||||| ||| | || |||||||||||||| || ||||||||||| |||||||    
T  5138 ggttgttgtcctacagcttgagcaacaacctcaagtgcagcagcaatagcggcatcgtttctaccagcca 5069  T

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Target: scaffold0239 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 9023 - 8966
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||| || |||| ||||||||| |||||||||||||| |||||||    
T  9023 acagcttgagctacagcctcaagtgaagcagcaatagcagcatcgtttctaccagcca 8966  T

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Target: scaffold0067 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 48404 - 48347
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||||| |||||||    
T  48404 acagcttgagctacagcctcaagtgcagcagcaatagtagcatcgtttctaccagcca 48347  T

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Target: scaffold0067; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 57438 - 57381
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||||| |||||||    
T  57438 acagcttgagctacagcctcaagtgcagcagcaatagtagcatcgtttctaccagcca 57381  T

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Target: scaffold0067; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 63826 - 63769
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||||| |||||||    
T  63826 acagcttgagctacagcctcaagtgcagcagcaatagtagcatcgtttctaccagcca 63769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 30545 - 30644
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | |||||  || |||| ||| ||||||||| |||||||||| ||||||||||| ||||| |||||||| ||  ||||||| ||||    
T  30545 gaacactgcataactctgaaaattctttcaacctccttgagccacttctgagctccgtcatggtcataccttcctttgaaagttggtggatgatttctca 30644  T

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Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 116692 - 116761
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||| ||||| ||||||||||| ||||| || |||||||| ||||| |||||||||||||| |||||||    
T  116692 ggttgctgtcctacagcttgagcaacagcctcaagtgcagctgcaatagcagcatcgtttctaccagcca 116761  T

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Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 176901 - 177112
Alignment:
Q  11 acactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcaga 110  Q
    |||||||||||| | ||| || ||||||| ||| ||||||||  | |||||||||||| ||||||| ||  | ||||| || ||  |||| || |||| |    
T  176901 acactgcatcaccctgaagactctctcaacctccttgagccagttttgagctccatcagggtcatacctctctttgaatgttggtggatggtttctcaaa 177000  T
Q  111 aaggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcag 210  Q
    |||||||| ||||||||| |  || || |   ||||| |   ||||| || | ||| || ||||||||||||||||| || |||||||||||||| ||||    
T  177001 aaggtctccagcatcctcacaccatcatt---accagaaccagcattcggctattgccctacagcttgagctacagcctcaagtgcagcagcaatagcag 177097  T
Q  211 catcgtttcttccag 225  Q
    |||| ||||| ||||    
T  177098 catcatttctcccag 177112  T

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Target: scaffold0020; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 97831 - 97788
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||||||||||||||| || |||||||||||||| ||||||||    
T  97831 acagcttgagctacagcctcaagtgcagcagcaatagcagcatc 97788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 36736 - 36923
Alignment:
Q  41 ctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctcgctacagcactt 140  Q
    ||||||||||||||  |||||||||||  | ||||| ||||| |||||| ||||  ||| |||| | ||||| || || | ||||||| || | ||| |     
T  36736 ctctttgagccacgattgagctccatctggatcataccttcctttgaaaataggcggataattcgttagaaaagtttccaacatcctcacttcggcatta 36835  T
Q  141 gcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
     ||||||||    ||||||| | | |||||||||||||||| |||| ||| |  ||||| ||||| ||||| ||||||||||||||||    
T  36836 acaccagcacctacattaggctatcgtcccacagcttgagccacagtttccaaagcagcggcaatagcagcgtcgtttcttccagcca 36923  T

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Target: scaffold0148 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 7130 - 7205
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| |||||||||||||| ||| |||| | ||||||||||||  || |||| || ||||||||||    
T  7130 gcattaggttgttgccccacagcttgagccacaacttccaatgcagcagcaataacaacatcattccttccagcca 7205  T

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Target: scaffold0148; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 7015 - 7101
Alignment:
Q  32 cctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctc 118  Q
    |||||||| ||| |||||||| || |||||||||||| | |||||||| ||||| || |||||  |||| ||||| ||||| |||||    
T  7015 cctctcaacctcattgagccatgtttgagctccatcaggatcatatctgcccttaaaggtaggcggatggttccttagaaaagtctc 7101  T

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Target: scaffold1056 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 2662 - 2756
Alignment:
Q  34 tctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaaaggtctctagcatcctc 128  Q
    |||||| ||||||||||||| || ||||||||||| ||||||| || || ||||| || ||  |||| || |||||||||||||| | |||||||    
T  2662 tctcaacctctttgagccacttcagagctccatcagggtcatacctccctttgaatgttggtggatggtttctcagaaaggtctccaacatcctc 2756  T

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Target: scaffold0443 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 12325 - 12443
Alignment:
Q  9 gaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctca 108  Q
    ||||||||||| || | ||| | ||| |||||||| || |||||  ||||||| || ||| | ||||| || ||||||||||| ||  ||||||||||||    
T  12325 gaacactgcatgaccctgaatatcctttcaatctccttcagccatttctgagcaccgtcaggatcatacctacccttgaaagttggtggatgattcctca 12424  T
Q  109 gaaaggtctctagcatcct 127  Q
    | || ||||||||||||||    
T  12425 ggaaagtctctagcatcct 12443  T

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Target: scaffold0203 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 3319 - 3261
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    ||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  3319 ggttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcagcatcgtt 3261  T

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Target: scaffold1979 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1979
Description:

Target: scaffold1979; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 237 - 294
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||||| || |||||||||||||| ||| |||| ||||| |||||||    
T  237 acagcttgagctacagcctcaagtgcagcagcaatagcatcatcatttctcccagcca 294  T

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Target: scaffold1914 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 460 - 403
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    |||||||||||||| || || |||||||||||||| ||||| |||||||| |||||||    
T  460 acagcttgagctactgcctcaagtgcagcagcaatagcagcgtcgtttctaccagcca 403  T

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Target: scaffold0664 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 526 - 583
Alignment:
Q  160 gttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtt 217  Q
    |||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  526 gttgctgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcagcatcgtt 583  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 264306 - 264363
Alignment:
Q  171 acagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||||||| | || |||| ||||||||| |||||||||||||| |||||||    
T  264306 acagcttgagctacaacctcaagtgtagcagcaatagcagcatcgtttctaccagcca 264363  T

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Target: scaffold0192 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 30450 - 30566
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||||||   ||| || ||||||| ||| ||||||||| |||| ||||||||| ||||||| || || ||||| || ||  || | || |||||||    
T  30450 cactgcatcaccatgaagactctctcaacctccttgagccacttctgggctccatcagggtcatacctccctttgaatgttggtggacggtttctcagaa 30549  T
Q  112 aggtctctagcatcctc 128  Q
    ||||||| |||||||||    
T  30550 aggtctccagcatcctc 30566  T

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Target: scaffold0104 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 42787 - 42735
Alignment:
Q  24 cagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcata 76  Q
    ||||||| |||||||| ||||||||||||| | |||||||||||| |||||||    
T  42787 cagaaaatcctctcaacctctttgagccacttttgagctccatcagggtcata 42735  T

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Target: scaffold0765 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 5481 - 5430
Alignment:
Q  177 tgagctacagcttctagtgcagcagcaatcgcagcatcgtttcttccagcca 228  Q
    ||||||||||| || ||||||||||||||  ||||||||||||| |||||||    
T  5481 tgagctacagcctcaagtgcagcagcaataacagcatcgtttctaccagcca 5430  T

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Target: scaffold0317 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 3688 - 3743
Alignment:
Q  159 ggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||||||||| ||| ||||||| ||||| || |||||||||||||| ||||||||    
T  3688 ggttgttgtcctacaacttgagcaacagcctcaagtgcagcagcaatagcagcatc 3743  T

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Target: scaffold0301 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 1152 - 1219
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatcgtttct 220  Q
    ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| ||| | ||||||||    
T  1152 gcattcggttgatgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcaacgtcgtttct 1219  T

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Target: scaffold0054 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 225
Target Start/End: Complemental strand, 62919 - 62709
Alignment:
Q  12 cactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctcagaa 111  Q
    |||||||| || | |||||  ||||||| ||| ||||||||| ||| |||||| |||   ||||| || || ||||| || ||  |||| ||||||||||    
T  62919 cactgcatgactctgaaaattctctcaacctccttgagccacttctaagctccgtcagtttcatacctccctttgaatgttggtggatggttcctcagaa 62820  T
Q  112 aggtctctagcatcctcgctacagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagc 211  Q
    ||||||| | ||||||  || || || |  || |||||   || || ||||||||||| ||||||| ||| ||||| || |||||||||||||| |||||    
T  62819 aggtctccaacatccttactccatcattaccagcagca---gcgttcggttgttgtcctacagcttcagcaacagcctcaagtgcagcagcaatagcagc 62723  T
Q  212 atcgtttcttccag 225  Q
     || ||||| ||||    
T  62722 gtcatttctcccag 62709  T

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Target: scaffold1061 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 467 - 528
Alignment:
Q  153 gcattaggttgttgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||| ||||| ||||| | ||||||||| ||||| || |||||||||||||| ||||||||    
T  467 gcattcggttgctgtcctatagcttgagcaacagcctcaagtgcagcagcaatagcagcatc 528  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 17029 - 16980
Alignment:
Q  165 tgtcccacagcttgagctacagcttctagtgcagcagcaatcgcagcatc 214  Q
    ||||| ||||||||||| ||||| || |||||||||||||| ||||||||    
T  17029 tgtcctacagcttgagcaacagcctcaagtgcagcagcaatagcagcatc 16980  T

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Target: scaffold2165 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 187 - 87
Alignment:
Q  8 tgaacactgcatcacgcagaaaaccctctcaatctctttgagccacgtctgagctccatcatggtcatatcttcccttgaaagtaggatgatgattcctc 107  Q
    |||||||||||| || | ||||| ||| ||||| || || |||||  |||||||||| ||| | |||||||| |||||||| || ||  |||||||||||    
T  187 tgaacactgcatgaccctgaaaatcctttcaatttccttcagccatttctgagctccgtcaggatcatatctacccttgaatgttggtggatgattcctc 88  T
Q  108 a 108  Q
    |    
T  87 a 87  T

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