View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0441_low_6 (Length: 324)
Name: NF0441_low_6
Description: NF0441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0441_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 6686206 - 6686456
Alignment:
| Q |
1 |
caaacttggttttcaaataagcctttgaccttagcatcattgtacaccatttgagcaagagtggtcttgcctatatataccacaaagaccaacaatagca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
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| T |
6686206 |
caaacttggttttcaaataagcctttgaccttagcatcattgtacaccatttgagcaagagtagtcttgcctatatataccaccaagaccaacaatagca |
6686305 |
T |
|
| Q |
101 |
acagaggaaataacattaacattggagtcttgttcaagcagcatgcttaccatcttcattttctcatcagttctaccaataataatatgatcagattcta |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6686306 |
acagaggaaataacattaacattggagtcttgttcaagcaacatgcttaccatcttcattttctcatcagttctaccaataataatatgatcagattcta |
6686405 |
T |
|
| Q |
201 |
agcaattagaactggttgttatcggacgtacacagatctctgctcctcctc |
251 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| || |||||||| |
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| T |
6686406 |
agcaattagaactggttgttatcagacgtacacagatctttggtcctcctc |
6686456 |
T |
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