View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0442_low_13 (Length: 255)
Name: NF0442_low_13
Description: NF0442
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0442_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 11869453 - 11869297
Alignment:
| Q |
3 |
attgcttgccgcaactaacgatgaacagtcggtgtaatgtacctgactggccctgtcatattcagcttcacttctagaagcatcctcaatttggaagggt |
102 |
Q |
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| T |
11869453 |
attgcttgccgcaactaaggatgaacagttggtgtaatgtacctgactggccctgtcatattcagcttcacttctagaagcatcctcaatttggaagggt |
11869354 |
T |
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| Q |
103 |
aaaacgggatcagccctactcacaaaatacaatttacttgactttccacctataacg |
159 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11869353 |
aaaacgggatcagccctactcacaaaatacaatttacttgactttccacctataacg |
11869297 |
T |
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