View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0443_low_23 (Length: 232)
Name: NF0443_low_23
Description: NF0443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0443_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 8631420 - 8631288
Alignment:
| Q |
1 |
cctacggttctcaattcgcgtttatgggtcgagttatctcaacccttaatcgagctcagaaagaaggtcactctcacgcgttactggagtcccccaccgg |
100 |
Q |
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| T |
8631420 |
cctacggttctcaattcgcgtttatgggtcgagttatctcaacccttaatcgagctcagaatgaaggtcactctcacgcgttactggagtcccccaccgg |
8631321 |
T |
|
| Q |
101 |
ttccggtaaatccctttctcttctctgctcctc |
133 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
8631320 |
ttccggtaaatccctttctcttctctgctcctc |
8631288 |
T |
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