View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0444_high_11 (Length: 266)
Name: NF0444_high_11
Description: NF0444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0444_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 51762034 - 51762200
Alignment:
| Q |
30 |
aactcttgtattaacggtttgaacagaagtgatgctgaaaagaaggtgaagttggaggtgaaaagaaaagttaccgatgcatctatgtttataagtaacg |
129 |
Q |
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| T |
51762034 |
aactcttgtattaacggtttgaacagaagcgatgctgaaaagaaggtgaagttggaggtgaaaagaaaagttaccgatgcatctatgtttataagtaacg |
51762133 |
T |
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| Q |
130 |
ctctctacttgatcaatcgtcttggggaaagcatgaatcataagcctcactccaattccaataactg |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
51762134 |
ctctctacttgatcaatcgtcttggggaaagcatgaatcaaaagcctcactccaattccaataactg |
51762200 |
T |
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